xref: /honee/qfunctions/differential_filter.h (revision 7f93c8d19df01b5a8b088c8c9155643f20da585e)
1 // Copyright (c) 2017-2023, Lawrence Livermore National Security, LLC and other CEED contributors.
2 // All Rights Reserved. See the top-level LICENSE and NOTICE files for details.
3 //
4 // SPDX-License-Identifier: BSD-2-Clause
5 //
6 // This file is part of CEED:  http://github.com/ceed
7 //
8 /// @file
9 /// Implementation of differential filtering
10 
11 #include <ceed.h>
12 
13 #include "differential_filter_enums.h"
14 #include "newtonian_state.h"
15 #include "newtonian_types.h"
16 #include "utils.h"
17 
18 enum DifferentialFilterDampingFunction { DIFF_FILTER_DAMP_NONE, DIFF_FILTER_DAMP_VAN_DRIEST, DIFF_FILTER_DAMP_MMS };
19 
20 typedef struct DifferentialFilterContext_ *DifferentialFilterContext;
21 struct DifferentialFilterContext_ {
22   bool                                   grid_based_width;
23   CeedScalar                             width_scaling[3];
24   CeedScalar                             kernel_scaling;
25   CeedScalar                             friction_length;
26   enum DifferentialFilterDampingFunction damping_function;
27   CeedScalar                             damping_constant;
28   struct NewtonianIdealGasContext_       gas;
29 };
30 
31 CEED_QFUNCTION_HELPER int DifferentialFilter_RHS(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, StateVariable state_var) {
32   const CeedScalar(*q)[CEED_Q_VLA]      = (const CeedScalar(*)[CEED_Q_VLA])in[0];
33   const CeedScalar(*q_data)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[1];
34   CeedScalar(*v0)[CEED_Q_VLA]           = (CeedScalar(*)[CEED_Q_VLA])out[0];
35   CeedScalar(*v1)[CEED_Q_VLA]           = (CeedScalar(*)[CEED_Q_VLA])out[1];
36 
37   DifferentialFilterContext context = (DifferentialFilterContext)ctx;
38   NewtonianIdealGasContext  gas     = &context->gas;
39 
40   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
41     const CeedScalar qi[5] = {q[0][i], q[1][i], q[2][i], q[3][i], q[4][i]};
42     const CeedScalar wdetJ = q_data[0][i];
43     const State      s     = StateFromQ(gas, qi, state_var);
44 
45     v0[DIFF_FILTER_PRESSURE][i]            = wdetJ * s.Y.pressure;
46     v0[DIFF_FILTER_VELOCITY_X][i]          = wdetJ * s.Y.velocity[0];
47     v0[DIFF_FILTER_VELOCITY_Y][i]          = wdetJ * s.Y.velocity[1];
48     v0[DIFF_FILTER_VELOCITY_Z][i]          = wdetJ * s.Y.velocity[2];
49     v0[DIFF_FILTER_TEMPERATURE][i]         = wdetJ * s.Y.temperature;
50     v1[DIFF_FILTER_VELOCITY_SQUARED_XX][i] = wdetJ * s.Y.velocity[0] * s.Y.velocity[0];
51     v1[DIFF_FILTER_VELOCITY_SQUARED_YY][i] = wdetJ * s.Y.velocity[1] * s.Y.velocity[1];
52     v1[DIFF_FILTER_VELOCITY_SQUARED_ZZ][i] = wdetJ * s.Y.velocity[2] * s.Y.velocity[2];
53     v1[DIFF_FILTER_VELOCITY_SQUARED_YZ][i] = wdetJ * s.Y.velocity[1] * s.Y.velocity[2];
54     v1[DIFF_FILTER_VELOCITY_SQUARED_XZ][i] = wdetJ * s.Y.velocity[0] * s.Y.velocity[2];
55     v1[DIFF_FILTER_VELOCITY_SQUARED_XY][i] = wdetJ * s.Y.velocity[0] * s.Y.velocity[1];
56   }
57   return 0;
58 }
59 
60 CEED_QFUNCTION(DifferentialFilter_RHS_Conserv)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
61   return DifferentialFilter_RHS(ctx, Q, in, out, STATEVAR_CONSERVATIVE);
62 }
63 
64 CEED_QFUNCTION(DifferentialFilter_RHS_Prim)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
65   return DifferentialFilter_RHS(ctx, Q, in, out, STATEVAR_PRIMITIVE);
66 }
67 
68 CEED_QFUNCTION_HELPER CeedScalar VanDriestWallDamping(const CeedScalar wall_dist_plus, const CeedScalar A_plus) {
69   return -expm1(-wall_dist_plus / A_plus);
70 }
71 
72 CEED_QFUNCTION_HELPER int DifferentialFilter_LHS_N(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, const CeedInt N) {
73   const CeedScalar(*q)[CEED_Q_VLA]          = (const CeedScalar(*)[CEED_Q_VLA])in[0];
74   const CeedScalar(*Grad_q)[CEED_Q_VLA]     = (const CeedScalar(*)[CEED_Q_VLA])in[1];
75   const CeedScalar(*A_ij_delta)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[2];
76   const CeedScalar(*x)[CEED_Q_VLA]          = (const CeedScalar(*)[CEED_Q_VLA])in[3];
77   const CeedScalar(*q_data)                 = in[4];
78   CeedScalar(*v)[CEED_Q_VLA]                = (CeedScalar(*)[CEED_Q_VLA])out[0];
79   CeedScalar(*Grad_v)[CEED_Q_VLA]           = (CeedScalar(*)[CEED_Q_VLA])out[1];
80 
81   DifferentialFilterContext context = (DifferentialFilterContext)ctx;
82 
83   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
84     CeedPragmaSIMD for (CeedInt j = 0; j < N; j++) {
85       const CeedScalar x_i[3] = {x[0][i], x[1][i], x[2][i]};
86       CeedScalar       wdetJ, dXdx[3][3];
87       QdataUnpack_3D(Q, i, q_data, &wdetJ, dXdx);
88 
89       CeedScalar Delta_ij[3][3] = {{0.}};
90       if (context->grid_based_width) {
91         CeedScalar       km_A_ij[6] = {A_ij_delta[0][i], A_ij_delta[1][i], A_ij_delta[2][i], A_ij_delta[3][i], A_ij_delta[4][i], A_ij_delta[5][i]};
92         const CeedScalar delta      = A_ij_delta[6][i];
93         ScaleN(km_A_ij, delta, 6);  // Dimensionalize the normalized anisotropy tensor
94         KMUnpack(km_A_ij, Delta_ij);
95       } else {
96         Delta_ij[0][0] = Delta_ij[1][1] = Delta_ij[2][2] = 1;
97       }
98 
99       CeedScalar scaling_matrix[3][3] = {{0}};
100       if (context->damping_function == DIFF_FILTER_DAMP_VAN_DRIEST) {
101         const CeedScalar damping_coeff = VanDriestWallDamping(x_i[1] / context->friction_length, context->damping_constant);
102         scaling_matrix[0][0]           = Max(1, damping_coeff * context->width_scaling[0]);
103         scaling_matrix[1][1]           = damping_coeff * context->width_scaling[1];
104         scaling_matrix[2][2]           = Max(1, damping_coeff * context->width_scaling[2]);
105       } else if (context->damping_function == DIFF_FILTER_DAMP_NONE) {
106         scaling_matrix[0][0] = context->width_scaling[0];
107         scaling_matrix[1][1] = context->width_scaling[1];
108         scaling_matrix[2][2] = context->width_scaling[2];
109       } else if (context->damping_function == DIFF_FILTER_DAMP_MMS) {
110         const CeedScalar damping_coeff = tanh(60 * x_i[1]);
111         scaling_matrix[0][0]           = 1;
112         scaling_matrix[1][1]           = damping_coeff;
113         scaling_matrix[2][2]           = 1;
114       }
115 
116       CeedScalar scaled_Delta_ij[3][3] = {{0.}};
117       MatMat3(scaling_matrix, Delta_ij, CEED_NOTRANSPOSE, CEED_NOTRANSPOSE, scaled_Delta_ij);
118       CopyMat3(scaled_Delta_ij, Delta_ij);
119 
120       CeedScalar alpha_ij[3][3] = {{0.}};
121       MatMat3(Delta_ij, Delta_ij, CEED_NOTRANSPOSE, CEED_NOTRANSPOSE, alpha_ij);
122       ScaleN((CeedScalar *)alpha_ij, context->kernel_scaling, 9);
123 
124       v[j][i] = wdetJ * q[j][i];
125       CeedScalar dq[3], dq_dXdx[3] = {0.}, dq_dXdx_a[3] = {0.};
126       for (int k = 0; k < 3; k++) {
127         dq[k] = Grad_q[0 * N + j][i] * dXdx[0][k] + Grad_q[1 * N + j][i] * dXdx[1][k] + Grad_q[2 * N + j][i] * dXdx[2][k];
128       }
129       MatVec3(dXdx, dq, CEED_NOTRANSPOSE, dq_dXdx);
130       MatVec3(alpha_ij, dq_dXdx, CEED_NOTRANSPOSE, dq_dXdx_a);
131       for (int k = 0; k < 3; k++) {
132         Grad_v[k * N + j][i] = wdetJ * dq_dXdx_a[k];
133       }
134     }
135   }
136   return 0;
137 }
138 
139 CEED_QFUNCTION(DifferentialFilter_LHS_1)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
140   return DifferentialFilter_LHS_N(ctx, Q, in, out, 1);
141 }
142 
143 CEED_QFUNCTION(DifferentialFilter_LHS_5)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
144   return DifferentialFilter_LHS_N(ctx, Q, in, out, 5);
145 }
146 
147 CEED_QFUNCTION(DifferentialFilter_LHS_6)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
148   return DifferentialFilter_LHS_N(ctx, Q, in, out, 6);
149 }
150 
151 CEED_QFUNCTION(DifferentialFilter_LHS_11)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
152   return DifferentialFilter_LHS_N(ctx, Q, in, out, 11);
153 }
154 
155 CEED_QFUNCTION_HELPER CeedScalar MMS_Solution(const CeedScalar x_i[3], const CeedScalar omega) {
156   return sin(6 * omega * x_i[0]) + sin(6 * omega * x_i[1]);
157 }
158 
159 CEED_QFUNCTION(DifferentialFilter_MMS_RHS)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
160   const CeedScalar(*q)[CEED_Q_VLA]      = (const CeedScalar(*)[CEED_Q_VLA])in[0];
161   const CeedScalar(*q_data)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[1];
162   CeedScalar(*v)[CEED_Q_VLA]            = (CeedScalar(*)[CEED_Q_VLA])out[0];
163 
164   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
165     const CeedScalar wdetJ = q_data[0][i];
166     v[0][i]                = wdetJ * q[0][i];
167   }
168   return 0;
169 }
170 
171 // @brief Generate initial condition such that the solution of the differential filtering is given by MMS_Solution() above
172 //
173 // This requires a *very* specific grid, as the anisotropic filtering is grid dependent.
174 // It's for a 75x75x1 grid on a [0,0.5]x3 domain.
175 // The grid is evenly distributed in x, but distributed based on the analytical mesh distribution \Delta_y = .001 + .01*tanh(6*y).
176 // The MMS test can optionally include a wall damping function (must also be enabled for the differential filtering itself).
177 // It can be run via:
178 // ./navierstokes -options_file tests-output/blasius_test.yaml -diff_filter_monitor -diff_filter_view cgns:filtered_solution.cgns -ts_max_steps 0
179 // -diff_filter_mms -diff_filter_kernel_scaling 1 -diff_filter_wall_damping_function mms -dm_plex_box_upper 0.5,0.5,0.5 -dm_plex_box_faces 75,75,1
180 // -mesh_transform platemesh -platemesh_y_node_locs_path tests-output/diff_filter_mms_y_spacing.dat -platemesh_top_angle 0
181 // -diff_filter_grid_based_width
182 CEED_QFUNCTION(DifferentialFilter_MMS_IC)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
183   const CeedScalar(*x)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[0];
184   CeedScalar(*q0)[CEED_Q_VLA]      = (CeedScalar(*)[CEED_Q_VLA])out[0];
185 
186   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
187     const CeedScalar x_i[3] = {x[0][i], x[1][i], x[2][i]};
188 
189     const CeedScalar aniso_scale_factor = 1;  // Must match the one passed in by -diff_filter_aniso_scale
190     const CeedScalar omega              = 2 * M_PI;
191     const CeedScalar omega6             = 6 * omega;
192     const CeedScalar phi_bar            = MMS_Solution(x_i, omega);
193     const CeedScalar dx                 = 0.5 / 75;
194     const CeedScalar dy_analytic        = .001 + .01 * tanh(6 * x_i[1]);
195     const CeedScalar dy                 = dy_analytic;
196     const CeedScalar d_dy_dy            = 0.06 * Square(1 / cosh(6 * x_i[1]));  // Change of \Delta_y w.r.t. y
197     CeedScalar       alpha[2]           = {Square(dx) * aniso_scale_factor, Square(dy) * aniso_scale_factor};
198     bool             damping            = true;
199     CeedScalar       dalpha1dy;
200     if (damping) {
201       CeedScalar damping_coeff   = tanh(60 * x_i[1]);
202       CeedScalar d_damping_coeff = 60 / Square(cosh(60 * x_i[1]));
203       dalpha1dy                  = aniso_scale_factor * 2 * (damping_coeff * dy) * (dy * d_damping_coeff + damping_coeff * d_dy_dy);
204       alpha[1] *= Square(damping_coeff);
205     } else {
206       dalpha1dy = aniso_scale_factor * 2 * dy * d_dy_dy;
207     }
208 
209     CeedScalar phi = phi_bar + alpha[0] * Square(omega6) * sin(6 * omega * x_i[0]) + alpha[1] * Square(omega6) * sin(omega6 * x_i[1]);
210     phi -= dalpha1dy * omega6 * cos(omega6 * x_i[1]);
211 
212     for (CeedInt j = 0; j < 5; j++) q0[j][i] = phi;
213   }
214   return 0;
215 }
216