xref: /honee/qfunctions/differential_filter.h (revision edcfef1b6f4e32859128041f533d18dbf23dee67)
1 // Copyright (c) 2017-2023, Lawrence Livermore National Security, LLC and other CEED contributors.
2 // All Rights Reserved. See the top-level LICENSE and NOTICE files for details.
3 //
4 // SPDX-License-Identifier: BSD-2-Clause
5 //
6 // This file is part of CEED:  http://github.com/ceed
7 //
8 /// @file
9 /// Implementation of differential filtering
10 
11 #include <ceed.h>
12 
13 #include "newtonian_state.h"
14 #include "newtonian_types.h"
15 #include "utils.h"
16 
17 enum DifferentialFilterStateComponent {
18   DIFF_FILTER_PRESSURE,
19   DIFF_FILTER_VELOCITY_X,
20   DIFF_FILTER_VELOCITY_Y,
21   DIFF_FILTER_VELOCITY_Z,
22   DIFF_FILTER_TEMPERATURE,
23   DIFF_FILTER_STATE_NUM,
24 };
25 
26 enum DifferentialFilterVelocitySquared {
27   DIFF_FILTER_VELOCITY_SQUARED_XX,
28   DIFF_FILTER_VELOCITY_SQUARED_YY,
29   DIFF_FILTER_VELOCITY_SQUARED_ZZ,
30   DIFF_FILTER_VELOCITY_SQUARED_YZ,
31   DIFF_FILTER_VELOCITY_SQUARED_XZ,
32   DIFF_FILTER_VELOCITY_SQUARED_XY,
33   DIFF_FILTER_VELOCITY_SQUARED_NUM,
34 };
35 
36 enum DifferentialFilterDampingFunction { DIFF_FILTER_DAMP_NONE, DIFF_FILTER_DAMP_VAN_DRIEST, DIFF_FILTER_DAMP_MMS };
37 
38 typedef struct DifferentialFilterContext_ *DifferentialFilterContext;
39 struct DifferentialFilterContext_ {
40   bool                                   grid_based_width;
41   CeedScalar                             width_scaling[3];
42   CeedScalar                             kernel_scaling;
43   CeedScalar                             friction_length;
44   enum DifferentialFilterDampingFunction damping_function;
45   CeedScalar                             damping_constant;
46   struct NewtonianIdealGasContext_       gas;
47 };
48 
49 CEED_QFUNCTION_HELPER int DifferentialFilter_RHS(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, StateVariable state_var) {
50   const CeedScalar(*q)[CEED_Q_VLA]      = (const CeedScalar(*)[CEED_Q_VLA])in[0];
51   const CeedScalar(*q_data)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[1];
52   const CeedScalar(*x)[CEED_Q_VLA]      = (const CeedScalar(*)[CEED_Q_VLA])in[2];
53   CeedScalar(*v0)[CEED_Q_VLA]           = (CeedScalar(*)[CEED_Q_VLA])out[0];
54   CeedScalar(*v1)[CEED_Q_VLA]           = (CeedScalar(*)[CEED_Q_VLA])out[1];
55 
56   DifferentialFilterContext context = (DifferentialFilterContext)ctx;
57   NewtonianIdealGasContext  gas     = &context->gas;
58 
59   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
60     const CeedScalar qi[5]  = {q[0][i], q[1][i], q[2][i], q[3][i], q[4][i]};
61     const CeedScalar x_i[3] = {x[0][i], x[1][i], x[2][i]};
62     const CeedScalar wdetJ  = q_data[0][i];
63     const State      s      = StateFromQ(gas, qi, state_var);
64 
65     v0[DIFF_FILTER_PRESSURE][i]            = wdetJ * s.Y.pressure;
66     v0[DIFF_FILTER_VELOCITY_X][i]          = wdetJ * s.Y.velocity[0];
67     v0[DIFF_FILTER_VELOCITY_Y][i]          = wdetJ * s.Y.velocity[1];
68     v0[DIFF_FILTER_VELOCITY_Z][i]          = wdetJ * s.Y.velocity[2];
69     v0[DIFF_FILTER_TEMPERATURE][i]         = wdetJ * s.Y.temperature;
70     v1[DIFF_FILTER_VELOCITY_SQUARED_XX][i] = wdetJ * s.Y.velocity[0] * s.Y.velocity[0];
71     v1[DIFF_FILTER_VELOCITY_SQUARED_YY][i] = wdetJ * s.Y.velocity[1] * s.Y.velocity[1];
72     v1[DIFF_FILTER_VELOCITY_SQUARED_ZZ][i] = wdetJ * s.Y.velocity[2] * s.Y.velocity[2];
73     v1[DIFF_FILTER_VELOCITY_SQUARED_YZ][i] = wdetJ * s.Y.velocity[1] * s.Y.velocity[2];
74     v1[DIFF_FILTER_VELOCITY_SQUARED_XZ][i] = wdetJ * s.Y.velocity[0] * s.Y.velocity[2];
75     v1[DIFF_FILTER_VELOCITY_SQUARED_XY][i] = wdetJ * s.Y.velocity[0] * s.Y.velocity[1];
76   }
77   return 0;
78 }
79 
80 CEED_QFUNCTION(DifferentialFilter_RHS_Conserv)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
81   return DifferentialFilter_RHS(ctx, Q, in, out, STATEVAR_CONSERVATIVE);
82 }
83 
84 CEED_QFUNCTION(DifferentialFilter_RHS_Prim)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
85   return DifferentialFilter_RHS(ctx, Q, in, out, STATEVAR_PRIMITIVE);
86 }
87 
88 CEED_QFUNCTION_HELPER CeedScalar VanDriestWallDamping(const CeedScalar wall_dist_plus, const CeedScalar A_plus) {
89   return -expm1(-wall_dist_plus / A_plus);
90 }
91 
92 CEED_QFUNCTION_HELPER int DifferentialFilter_LHS_N(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out, const CeedInt N) {
93   const CeedScalar(*q)[CEED_Q_VLA]          = (const CeedScalar(*)[CEED_Q_VLA])in[0];
94   const CeedScalar(*Grad_q)[CEED_Q_VLA]     = (const CeedScalar(*)[CEED_Q_VLA])in[1];
95   const CeedScalar(*A_ij_delta)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[2];
96   const CeedScalar(*x)[CEED_Q_VLA]          = (const CeedScalar(*)[CEED_Q_VLA])in[3];
97   const CeedScalar(*q_data)                 = in[4];
98   CeedScalar(*v)[CEED_Q_VLA]                = (CeedScalar(*)[CEED_Q_VLA])out[0];
99   CeedScalar(*Grad_v)[CEED_Q_VLA]           = (CeedScalar(*)[CEED_Q_VLA])out[1];
100 
101   DifferentialFilterContext context = (DifferentialFilterContext)ctx;
102 
103   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
104     CeedPragmaSIMD for (CeedInt j = 0; j < N; j++) {
105       const CeedScalar x_i[3] = {x[0][i], x[1][i], x[2][i]};
106       CeedScalar       wdetJ, dXdx[3][3];
107       QdataUnpack_3D(Q, i, q_data, &wdetJ, dXdx);
108 
109       CeedScalar Delta_ij[3][3] = {{0.}};
110       if (context->grid_based_width) {
111         CeedScalar       km_A_ij[6] = {A_ij_delta[0][i], A_ij_delta[1][i], A_ij_delta[2][i], A_ij_delta[3][i], A_ij_delta[4][i], A_ij_delta[5][i]};
112         const CeedScalar delta      = A_ij_delta[6][i];
113         ScaleN(km_A_ij, delta, 6);  // Dimensionalize the normalized anisotropy tensor
114         KMUnpack(km_A_ij, Delta_ij);
115       } else {
116         Delta_ij[0][0] = Delta_ij[1][1] = Delta_ij[2][2] = 1;
117       }
118 
119       CeedScalar scaling_matrix[3][3] = {{0}};
120       if (context->damping_function == DIFF_FILTER_DAMP_VAN_DRIEST) {
121         const CeedScalar damping_coeff = VanDriestWallDamping(x_i[1] / context->friction_length, context->damping_constant);
122         scaling_matrix[0][0]           = Max(1, damping_coeff * context->width_scaling[0]);
123         scaling_matrix[1][1]           = damping_coeff * context->width_scaling[1];
124         scaling_matrix[2][2]           = Max(1, damping_coeff * context->width_scaling[2]);
125       } else if (context->damping_function == DIFF_FILTER_DAMP_NONE) {
126         scaling_matrix[0][0] = context->width_scaling[0];
127         scaling_matrix[1][1] = context->width_scaling[1];
128         scaling_matrix[2][2] = context->width_scaling[2];
129       } else if (context->damping_function == DIFF_FILTER_DAMP_MMS) {
130         const CeedScalar damping_coeff = tanh(60 * x_i[1]);
131         scaling_matrix[0][0]           = 1;
132         scaling_matrix[1][1]           = damping_coeff;
133         scaling_matrix[2][2]           = 1;
134       }
135 
136       CeedScalar scaled_Delta_ij[3][3] = {{0.}};
137       MatMat3(scaling_matrix, Delta_ij, CEED_NOTRANSPOSE, CEED_NOTRANSPOSE, scaled_Delta_ij);
138       CopyMat3(scaled_Delta_ij, Delta_ij);
139 
140       CeedScalar alpha_ij[3][3] = {{0.}};
141       MatMat3(Delta_ij, Delta_ij, CEED_NOTRANSPOSE, CEED_NOTRANSPOSE, alpha_ij);
142       ScaleN((CeedScalar *)alpha_ij, context->kernel_scaling, 9);
143 
144       v[j][i] = wdetJ * q[j][i];
145       CeedScalar dq[3], dq_dXdx[3] = {0.}, dq_dXdx_a[3] = {0.};
146       for (int k = 0; k < 3; k++) {
147         dq[k] = Grad_q[0 * N + j][i] * dXdx[0][k] + Grad_q[1 * N + j][i] * dXdx[1][k] + Grad_q[2 * N + j][i] * dXdx[2][k];
148       }
149       MatVec3(dXdx, dq, CEED_NOTRANSPOSE, dq_dXdx);
150       MatVec3(alpha_ij, dq_dXdx, CEED_NOTRANSPOSE, dq_dXdx_a);
151       for (int k = 0; k < 3; k++) {
152         Grad_v[k * N + j][i] = wdetJ * dq_dXdx_a[k];
153       }
154     }
155   }
156   return 0;
157 }
158 
159 CEED_QFUNCTION(DifferentialFilter_LHS_1)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
160   return DifferentialFilter_LHS_N(ctx, Q, in, out, 1);
161 }
162 
163 CEED_QFUNCTION(DifferentialFilter_LHS_5)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
164   return DifferentialFilter_LHS_N(ctx, Q, in, out, 5);
165 }
166 
167 CEED_QFUNCTION(DifferentialFilter_LHS_6)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
168   return DifferentialFilter_LHS_N(ctx, Q, in, out, 6);
169 }
170 
171 CEED_QFUNCTION(DifferentialFilter_LHS_11)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
172   return DifferentialFilter_LHS_N(ctx, Q, in, out, 11);
173 }
174 
175 CEED_QFUNCTION_HELPER CeedScalar MMS_Solution(const CeedScalar x_i[3], const CeedScalar omega) {
176   return sin(6 * omega * x_i[0]) + sin(6 * omega * x_i[1]);
177 }
178 
179 CEED_QFUNCTION(DifferentialFilter_MMS_RHS)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
180   const CeedScalar(*q)[CEED_Q_VLA]      = (const CeedScalar(*)[CEED_Q_VLA])in[0];
181   const CeedScalar(*q_data)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[1];
182   CeedScalar(*v)[CEED_Q_VLA]            = (CeedScalar(*)[CEED_Q_VLA])out[0];
183 
184   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
185     const CeedScalar wdetJ = q_data[0][i];
186     v[0][i]                = wdetJ * q[0][i];
187   }
188   return 0;
189 }
190 
191 // @brief Generate initial condition such that the solution of the differential filtering is given by MMS_Solution() above
192 //
193 // This requires a *very* specific grid, as the anisotropic filtering is grid dependent.
194 // It's for a 75x75x1 grid on a [0,0.5]x3 domain.
195 // The grid is evenly distributed in x, but distributed based on the analytical mesh distribution \Delta_y = .001 + .01*tanh(6*y).
196 // The MMS test can optionally include a wall damping function (must also be enabled for the differential filtering itself).
197 // It can be run via:
198 // ./navierstokes -options_file tests-output/blasius_test.yaml -diff_filter_monitor -diff_filter_view cgns:filtered_solution.cgns -ts_max_steps 0
199 // -diff_filter_mms -diff_filter_kernel_scaling 1 -diff_filter_wall_damping_function mms -dm_plex_box_upper 0.5,0.5,0.5 -dm_plex_box_faces 75,75,1
200 // -mesh_transform platemesh -platemesh_y_node_locs_path tests-output/diff_filter_mms_y_spacing.dat -platemesh_top_angle 0
201 // -diff_filter_grid_based_width
202 CEED_QFUNCTION(DifferentialFilter_MMS_IC)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) {
203   const CeedScalar(*x)[CEED_Q_VLA] = (const CeedScalar(*)[CEED_Q_VLA])in[0];
204   CeedScalar(*q0)[CEED_Q_VLA]      = (CeedScalar(*)[CEED_Q_VLA])out[0];
205 
206   CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) {
207     const CeedScalar x_i[3] = {x[0][i], x[1][i], x[2][i]};
208 
209     const CeedScalar aniso_scale_factor = 1;  // Must match the one passed in by -diff_filter_aniso_scale
210     const CeedScalar omega              = 2 * M_PI;
211     const CeedScalar omega6             = 6 * omega;
212     const CeedScalar phi_bar            = MMS_Solution(x_i, omega);
213     const CeedScalar dx                 = 0.5 / 75;
214     const CeedScalar dy_analytic        = .001 + .01 * tanh(6 * x_i[1]);
215     const CeedScalar dy                 = dy_analytic;
216     const CeedScalar d_dy_dy            = 0.06 * Square(1 / cosh(6 * x_i[1]));  // Change of \Delta_y w.r.t. y
217     CeedScalar       alpha[2]           = {Square(dx) * aniso_scale_factor, Square(dy) * aniso_scale_factor};
218     bool             damping            = true;
219     CeedScalar       dalpha1dy;
220     if (damping) {
221       CeedScalar damping_coeff   = tanh(60 * x_i[1]);
222       CeedScalar d_damping_coeff = 60 / Square(cosh(60 * x_i[1]));
223       dalpha1dy                  = aniso_scale_factor * 2 * (damping_coeff * dy) * (dy * d_damping_coeff + damping_coeff * d_dy_dy);
224       alpha[1] *= Square(damping_coeff);
225     } else {
226       dalpha1dy = aniso_scale_factor * 2 * dy * d_dy_dy;
227     }
228 
229     CeedScalar phi = phi_bar + alpha[0] * Square(omega6) * sin(6 * omega * x_i[0]) + alpha[1] * Square(omega6) * sin(omega6 * x_i[1]);
230     phi -= dalpha1dy * omega6 * cos(omega6 * x_i[1]);
231 
232     for (CeedInt j = 0; j < 5; j++) q0[j][i] = phi;
233   }
234   return 0;
235 }
236