1a515125bSLeila Ghaffari // Copyright (c) 2017, Lawrence Livermore National Security, LLC. Produced at 2a515125bSLeila Ghaffari // the Lawrence Livermore National Laboratory. LLNL-CODE-734707. All Rights 3a515125bSLeila Ghaffari // reserved. See files LICENSE and NOTICE for details. 4a515125bSLeila Ghaffari // 5a515125bSLeila Ghaffari // This file is part of CEED, a collection of benchmarks, miniapps, software 6a515125bSLeila Ghaffari // libraries and APIs for efficient high-order finite element and spectral 7a515125bSLeila Ghaffari // element discretizations for exascale applications. For more information and 8a515125bSLeila Ghaffari // source code availability see http://github.com/ceed. 9a515125bSLeila Ghaffari // 10a515125bSLeila Ghaffari // The CEED research is supported by the Exascale Computing Project 17-SC-20-SC, 11a515125bSLeila Ghaffari // a collaborative effort of two U.S. Department of Energy organizations (Office 12a515125bSLeila Ghaffari // of Science and the National Nuclear Security Administration) responsible for 13a515125bSLeila Ghaffari // the planning and preparation of a capable exascale ecosystem, including 14a515125bSLeila Ghaffari // software, applications, hardware, advanced system engineering and early 15a515125bSLeila Ghaffari // testbed platforms, in support of the nation's exascale computing imperative. 16a515125bSLeila Ghaffari 17a515125bSLeila Ghaffari /// @file 18a515125bSLeila Ghaffari /// Setup libCEED for Navier-Stokes example using PETSc 19a515125bSLeila Ghaffari 20a515125bSLeila Ghaffari #include "../navierstokes.h" 21a515125bSLeila Ghaffari 22a515125bSLeila Ghaffari // Utility function - essential BC dofs are encoded in closure indices as -(i+1). 23a515125bSLeila Ghaffari PetscInt Involute(PetscInt i) { 24a515125bSLeila Ghaffari return i >= 0 ? i : -(i+1); 25a515125bSLeila Ghaffari } 26a515125bSLeila Ghaffari 27a515125bSLeila Ghaffari // Utility function to create local CEED restriction 286b1ccf21SJeremy L Thompson PetscErrorCode CreateRestrictionFromPlex(Ceed ceed, DM dm, CeedInt height, 296b1ccf21SJeremy L Thompson DMLabel domain_label, CeedInt value, CeedElemRestriction *elem_restr) { 306b1ccf21SJeremy L Thompson PetscInt num_elem, elem_size, num_dof, num_comp, *elem_restr_offsets; 31a515125bSLeila Ghaffari PetscErrorCode ierr; 326b1ccf21SJeremy L Thompson 33a515125bSLeila Ghaffari PetscFunctionBeginUser; 346b1ccf21SJeremy L Thompson ierr = DMPlexGetLocalOffsets(dm, domain_label, value, height, 0, &num_elem, 356b1ccf21SJeremy L Thompson &elem_size, &num_comp, &num_dof, &elem_restr_offsets); 366b1ccf21SJeremy L Thompson CHKERRQ(ierr); 37a515125bSLeila Ghaffari 386b1ccf21SJeremy L Thompson CeedElemRestrictionCreate(ceed, num_elem, elem_size, num_comp, 396b1ccf21SJeremy L Thompson 1, num_dof, CEED_MEM_HOST, CEED_COPY_VALUES, 406b1ccf21SJeremy L Thompson elem_restr_offsets, elem_restr); 416b1ccf21SJeremy L Thompson ierr = PetscFree(elem_restr_offsets); CHKERRQ(ierr); 42a515125bSLeila Ghaffari 43a515125bSLeila Ghaffari PetscFunctionReturn(0); 44a515125bSLeila Ghaffari } 45a515125bSLeila Ghaffari 46a515125bSLeila Ghaffari // Utility function to get Ceed Restriction for each domain 47a515125bSLeila Ghaffari PetscErrorCode GetRestrictionForDomain(Ceed ceed, DM dm, CeedInt height, 48a515125bSLeila Ghaffari DMLabel domain_label, PetscInt value, 496b1ccf21SJeremy L Thompson CeedInt Q, CeedInt q_data_size, 50a515125bSLeila Ghaffari CeedElemRestriction *elem_restr_q, 51a515125bSLeila Ghaffari CeedElemRestriction *elem_restr_x, 52a515125bSLeila Ghaffari CeedElemRestriction *elem_restr_qd_i) { 53a515125bSLeila Ghaffari DM dm_coord; 54a515125bSLeila Ghaffari CeedInt dim, loc_num_elem; 55a515125bSLeila Ghaffari CeedInt Q_dim; 56a515125bSLeila Ghaffari PetscErrorCode ierr; 57a515125bSLeila Ghaffari PetscFunctionBeginUser; 58a515125bSLeila Ghaffari 59a515125bSLeila Ghaffari ierr = DMGetDimension(dm, &dim); CHKERRQ(ierr); 60a515125bSLeila Ghaffari dim -= height; 61a515125bSLeila Ghaffari Q_dim = CeedIntPow(Q, dim); 62a515125bSLeila Ghaffari ierr = DMGetCoordinateDM(dm, &dm_coord); CHKERRQ(ierr); 63a515125bSLeila Ghaffari ierr = DMPlexSetClosurePermutationTensor(dm_coord, PETSC_DETERMINE, NULL); 64a515125bSLeila Ghaffari CHKERRQ(ierr); 656b1ccf21SJeremy L Thompson ierr = CreateRestrictionFromPlex(ceed, dm, height, domain_label, value, 666b1ccf21SJeremy L Thompson elem_restr_q); 676b1ccf21SJeremy L Thompson CHKERRQ(ierr); 686b1ccf21SJeremy L Thompson ierr = CreateRestrictionFromPlex(ceed, dm_coord, height, domain_label, value, 696b1ccf21SJeremy L Thompson elem_restr_x); 706b1ccf21SJeremy L Thompson CHKERRQ(ierr); 71a515125bSLeila Ghaffari CeedElemRestrictionGetNumElements(*elem_restr_q, &loc_num_elem); 72a515125bSLeila Ghaffari CeedElemRestrictionCreateStrided(ceed, loc_num_elem, Q_dim, 73a515125bSLeila Ghaffari q_data_size, q_data_size*loc_num_elem*Q_dim, 74a515125bSLeila Ghaffari CEED_STRIDES_BACKEND, elem_restr_qd_i); 75a515125bSLeila Ghaffari PetscFunctionReturn(0); 76a515125bSLeila Ghaffari } 77a515125bSLeila Ghaffari 78a515125bSLeila Ghaffari // Utility function to create CEED Composite Operator for the entire domain 79a515125bSLeila Ghaffari PetscErrorCode CreateOperatorForDomain(Ceed ceed, DM dm, SimpleBC bc, 80a515125bSLeila Ghaffari CeedData ceed_data, Physics phys, 81a515125bSLeila Ghaffari CeedOperator op_apply_vol, CeedInt height, 82a515125bSLeila Ghaffari CeedInt P_sur, CeedInt Q_sur, CeedInt q_data_size_sur, 83a515125bSLeila Ghaffari CeedOperator *op_apply) { 84*002797a3SLeila Ghaffari //CeedInt dim; 85a515125bSLeila Ghaffari DMLabel domain_label; 86a515125bSLeila Ghaffari PetscErrorCode ierr; 87a515125bSLeila Ghaffari PetscFunctionBeginUser; 88a515125bSLeila Ghaffari 89a515125bSLeila Ghaffari // Create Composite Operaters 90a515125bSLeila Ghaffari CeedCompositeOperatorCreate(ceed, op_apply); 91a515125bSLeila Ghaffari 92a515125bSLeila Ghaffari // --Apply Sub-Operator for the volume 93a515125bSLeila Ghaffari CeedCompositeOperatorAddSub(*op_apply, op_apply_vol); 94a515125bSLeila Ghaffari 95a515125bSLeila Ghaffari // -- Create Sub-Operator for in/outflow BCs 96139613f2SLeila Ghaffari if (phys->has_neumann) { 97a515125bSLeila Ghaffari // --- Setup 98a515125bSLeila Ghaffari ierr = DMGetLabel(dm, "Face Sets", &domain_label); CHKERRQ(ierr); 99*002797a3SLeila Ghaffari //ierr = DMGetDimension(dm, &dim); CHKERRQ(ierr); 100a515125bSLeila Ghaffari 101a515125bSLeila Ghaffari // --- Get number of quadrature points for the boundaries 102a515125bSLeila Ghaffari CeedInt num_qpts_sur; 103a515125bSLeila Ghaffari CeedBasisGetNumQuadraturePoints(ceed_data->basis_q_sur, &num_qpts_sur); 104a515125bSLeila Ghaffari 105*002797a3SLeila Ghaffari // --- Create Sub-Operator for inflow boundaries 106*002797a3SLeila Ghaffari for (CeedInt i=0; i < bc->num_inflow; i++) { 107a515125bSLeila Ghaffari CeedVector q_data_sur; 108*002797a3SLeila Ghaffari CeedOperator op_setup_sur, op_apply_inflow; 109*002797a3SLeila Ghaffari CeedElemRestriction elem_restr_x_sur, elem_restr_q_sur, elem_restr_qd_i_sur; 110a515125bSLeila Ghaffari 111a515125bSLeila Ghaffari // ---- CEED Restriction 112*002797a3SLeila Ghaffari ierr = GetRestrictionForDomain(ceed, dm, height, domain_label, bc->inflows[i], 113*002797a3SLeila Ghaffari Q_sur, q_data_size_sur, &elem_restr_q_sur, &elem_restr_x_sur, 114*002797a3SLeila Ghaffari &elem_restr_qd_i_sur); 115a515125bSLeila Ghaffari CHKERRQ(ierr); 116a515125bSLeila Ghaffari 117a515125bSLeila Ghaffari // ---- CEED Vector 118a515125bSLeila Ghaffari PetscInt loc_num_elem_sur; 119a515125bSLeila Ghaffari CeedElemRestrictionGetNumElements(elem_restr_q_sur, &loc_num_elem_sur); 120a515125bSLeila Ghaffari CeedVectorCreate(ceed, q_data_size_sur*loc_num_elem_sur*num_qpts_sur, 121a515125bSLeila Ghaffari &q_data_sur); 122a515125bSLeila Ghaffari 123a515125bSLeila Ghaffari // ---- CEED Operator 124a515125bSLeila Ghaffari // ----- CEED Operator for Setup (geometric factors) 125a515125bSLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_setup_sur, NULL, NULL, &op_setup_sur); 126a515125bSLeila Ghaffari CeedOperatorSetField(op_setup_sur, "dx", elem_restr_x_sur, 127139613f2SLeila Ghaffari ceed_data->basis_x_sur, CEED_VECTOR_ACTIVE); 128a515125bSLeila Ghaffari CeedOperatorSetField(op_setup_sur, "weight", CEED_ELEMRESTRICTION_NONE, 129a515125bSLeila Ghaffari ceed_data->basis_x_sur, CEED_VECTOR_NONE); 1303b1e209bSJeremy L Thompson CeedOperatorSetField(op_setup_sur, "surface qdata", elem_restr_qd_i_sur, 131a515125bSLeila Ghaffari CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE); 132a515125bSLeila Ghaffari 133a515125bSLeila Ghaffari // ----- CEED Operator for Physics 134*002797a3SLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_apply_inflow, NULL, NULL, 135*002797a3SLeila Ghaffari &op_apply_inflow); 136*002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_inflow, "q", elem_restr_q_sur, 137a515125bSLeila Ghaffari ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 138*002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_inflow, "surface qdata", elem_restr_qd_i_sur, 139a515125bSLeila Ghaffari CEED_BASIS_COLLOCATED, q_data_sur); 140*002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_inflow, "x", elem_restr_x_sur, 141a515125bSLeila Ghaffari ceed_data->basis_x_sur, ceed_data->x_coord); 142*002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_inflow, "v", elem_restr_q_sur, 143a515125bSLeila Ghaffari ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 144a515125bSLeila Ghaffari 145a515125bSLeila Ghaffari // ----- Apply CEED operator for Setup 146a515125bSLeila Ghaffari CeedOperatorApply(op_setup_sur, ceed_data->x_coord, q_data_sur, 147a515125bSLeila Ghaffari CEED_REQUEST_IMMEDIATE); 148a515125bSLeila Ghaffari 149*002797a3SLeila Ghaffari // ----- Apply Sub-Operator for Physics 150*002797a3SLeila Ghaffari CeedCompositeOperatorAddSub(*op_apply, op_apply_inflow); 151a515125bSLeila Ghaffari 152a515125bSLeila Ghaffari // ----- Cleanup 153a515125bSLeila Ghaffari CeedVectorDestroy(&q_data_sur); 154a515125bSLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_q_sur); 155a515125bSLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_x_sur); 156a515125bSLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_qd_i_sur); 157a515125bSLeila Ghaffari CeedOperatorDestroy(&op_setup_sur); 158*002797a3SLeila Ghaffari CeedOperatorDestroy(&op_apply_inflow); 159a515125bSLeila Ghaffari } 160a515125bSLeila Ghaffari 161*002797a3SLeila Ghaffari // --- Create Sub-Operator for outflow boundaries 162*002797a3SLeila Ghaffari for (CeedInt i=0; i < bc->num_outflow; i++) { 163*002797a3SLeila Ghaffari CeedVector q_data_sur; 164*002797a3SLeila Ghaffari CeedOperator op_setup_sur, op_apply_outflow; 165*002797a3SLeila Ghaffari CeedElemRestriction elem_restr_x_sur, elem_restr_q_sur, elem_restr_qd_i_sur; 166*002797a3SLeila Ghaffari 167*002797a3SLeila Ghaffari // ---- CEED Restriction 168*002797a3SLeila Ghaffari ierr = GetRestrictionForDomain(ceed, dm, height, domain_label, bc->outflows[i], 169*002797a3SLeila Ghaffari Q_sur, q_data_size_sur, &elem_restr_q_sur, &elem_restr_x_sur, 170*002797a3SLeila Ghaffari &elem_restr_qd_i_sur); 171*002797a3SLeila Ghaffari CHKERRQ(ierr); 172*002797a3SLeila Ghaffari 173*002797a3SLeila Ghaffari // ---- CEED Vector 174*002797a3SLeila Ghaffari PetscInt loc_num_elem_sur; 175*002797a3SLeila Ghaffari CeedElemRestrictionGetNumElements(elem_restr_q_sur, &loc_num_elem_sur); 176*002797a3SLeila Ghaffari CeedVectorCreate(ceed, q_data_size_sur*loc_num_elem_sur*num_qpts_sur, 177*002797a3SLeila Ghaffari &q_data_sur); 178*002797a3SLeila Ghaffari 179*002797a3SLeila Ghaffari // ---- CEED Operator 180*002797a3SLeila Ghaffari // ----- CEED Operator for Setup (geometric factors) 181*002797a3SLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_setup_sur, NULL, NULL, &op_setup_sur); 182*002797a3SLeila Ghaffari CeedOperatorSetField(op_setup_sur, "dx", elem_restr_x_sur, 183*002797a3SLeila Ghaffari ceed_data->basis_x_sur, CEED_VECTOR_ACTIVE); 184*002797a3SLeila Ghaffari CeedOperatorSetField(op_setup_sur, "weight", CEED_ELEMRESTRICTION_NONE, 185*002797a3SLeila Ghaffari ceed_data->basis_x_sur, CEED_VECTOR_NONE); 186*002797a3SLeila Ghaffari CeedOperatorSetField(op_setup_sur, "surface qdata", elem_restr_qd_i_sur, 187*002797a3SLeila Ghaffari CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE); 188*002797a3SLeila Ghaffari 189*002797a3SLeila Ghaffari // ----- CEED Operator for Physics 190*002797a3SLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_apply_outflow, NULL, NULL, 191*002797a3SLeila Ghaffari &op_apply_outflow); 192*002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_outflow, "q", elem_restr_q_sur, 193*002797a3SLeila Ghaffari ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 194*002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_outflow, "surface qdata", elem_restr_qd_i_sur, 195*002797a3SLeila Ghaffari CEED_BASIS_COLLOCATED, q_data_sur); 196*002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_outflow, "x", elem_restr_x_sur, 197*002797a3SLeila Ghaffari ceed_data->basis_x_sur, ceed_data->x_coord); 198*002797a3SLeila Ghaffari CeedOperatorSetField(op_apply_outflow, "v", elem_restr_q_sur, 199*002797a3SLeila Ghaffari ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 200*002797a3SLeila Ghaffari 201*002797a3SLeila Ghaffari // ----- Apply CEED operator for Setup 202*002797a3SLeila Ghaffari CeedOperatorApply(op_setup_sur, ceed_data->x_coord, q_data_sur, 203*002797a3SLeila Ghaffari CEED_REQUEST_IMMEDIATE); 204*002797a3SLeila Ghaffari 205*002797a3SLeila Ghaffari // ----- Apply Sub-Operator for Physics 206*002797a3SLeila Ghaffari CeedCompositeOperatorAddSub(*op_apply, op_apply_outflow); 207*002797a3SLeila Ghaffari 208*002797a3SLeila Ghaffari // ----- Cleanup 209*002797a3SLeila Ghaffari CeedVectorDestroy(&q_data_sur); 210*002797a3SLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_q_sur); 211*002797a3SLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_x_sur); 212*002797a3SLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_qd_i_sur); 213*002797a3SLeila Ghaffari CeedOperatorDestroy(&op_setup_sur); 214*002797a3SLeila Ghaffari CeedOperatorDestroy(&op_apply_outflow); 215*002797a3SLeila Ghaffari } 216*002797a3SLeila Ghaffari } 217a515125bSLeila Ghaffari PetscFunctionReturn(0); 218a515125bSLeila Ghaffari } 219a515125bSLeila Ghaffari 220a515125bSLeila Ghaffari PetscErrorCode SetupLibceed(Ceed ceed, CeedData ceed_data, DM dm, User user, 221a515125bSLeila Ghaffari AppCtx app_ctx, ProblemData *problem, SimpleBC bc) { 222a515125bSLeila Ghaffari PetscErrorCode ierr; 223a515125bSLeila Ghaffari PetscFunctionBeginUser; 224a515125bSLeila Ghaffari 225a515125bSLeila Ghaffari // ***************************************************************************** 226a515125bSLeila Ghaffari // Set up CEED objects for the interior domain (volume) 227a515125bSLeila Ghaffari // ***************************************************************************** 228a515125bSLeila Ghaffari const PetscInt num_comp_q = 5; 229a515125bSLeila Ghaffari const CeedInt dim = problem->dim, 230a515125bSLeila Ghaffari num_comp_x = problem->dim, 231a515125bSLeila Ghaffari q_data_size_vol = problem->q_data_size_vol, 232a515125bSLeila Ghaffari P = app_ctx->degree + 1, 233a515125bSLeila Ghaffari Q = P + app_ctx->q_extra; 234a515125bSLeila Ghaffari 235a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 236a515125bSLeila Ghaffari // CEED Bases 237a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 238a515125bSLeila Ghaffari CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_q, P, Q, CEED_GAUSS, 239a515125bSLeila Ghaffari &ceed_data->basis_q); 240a515125bSLeila Ghaffari CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_x, 2, Q, CEED_GAUSS, 241a515125bSLeila Ghaffari &ceed_data->basis_x); 242a515125bSLeila Ghaffari CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_x, 2, P, 243a515125bSLeila Ghaffari CEED_GAUSS_LOBATTO, &ceed_data->basis_xc); 244a515125bSLeila Ghaffari 245a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 246a515125bSLeila Ghaffari // CEED Restrictions 247a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 248a515125bSLeila Ghaffari // -- Create restriction 2496b1ccf21SJeremy L Thompson ierr = GetRestrictionForDomain(ceed, dm, 0, 0, 0, Q, q_data_size_vol, 2506b1ccf21SJeremy L Thompson &ceed_data->elem_restr_q, &ceed_data->elem_restr_x, 251a515125bSLeila Ghaffari &ceed_data->elem_restr_qd_i); CHKERRQ(ierr); 252a515125bSLeila Ghaffari // -- Create E vectors 253a515125bSLeila Ghaffari CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->q_ceed, NULL); 254a515125bSLeila Ghaffari CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->q_dot_ceed, 255a515125bSLeila Ghaffari NULL); 256a515125bSLeila Ghaffari CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->g_ceed, NULL); 257a515125bSLeila Ghaffari 258a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 259a515125bSLeila Ghaffari // CEED QFunctions 260a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 261a515125bSLeila Ghaffari // -- Create QFunction for quadrature data 262a515125bSLeila Ghaffari CeedQFunctionCreateInterior(ceed, 1, problem->setup_vol, problem->setup_vol_loc, 263a515125bSLeila Ghaffari &ceed_data->qf_setup_vol); 264a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_setup_vol, "dx", num_comp_x*dim, 265a515125bSLeila Ghaffari CEED_EVAL_GRAD); 266a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_setup_vol, "weight", 1, CEED_EVAL_WEIGHT); 2673b1e209bSJeremy L Thompson CeedQFunctionAddOutput(ceed_data->qf_setup_vol, "qdata", q_data_size_vol, 268a515125bSLeila Ghaffari CEED_EVAL_NONE); 269a515125bSLeila Ghaffari 270a515125bSLeila Ghaffari // -- Create QFunction for ICs 271a515125bSLeila Ghaffari CeedQFunctionCreateInterior(ceed, 1, problem->ics, problem->ics_loc, 272a515125bSLeila Ghaffari &ceed_data->qf_ics); 273a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_ics, "x", num_comp_x, CEED_EVAL_INTERP); 274a515125bSLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_ics, "q0", num_comp_q, CEED_EVAL_NONE); 275a515125bSLeila Ghaffari 276a515125bSLeila Ghaffari // -- Create QFunction for RHS 277a515125bSLeila Ghaffari if (problem->apply_vol_rhs) { 278a515125bSLeila Ghaffari CeedQFunctionCreateInterior(ceed, 1, problem->apply_vol_rhs, 279a515125bSLeila Ghaffari problem->apply_vol_rhs_loc, &ceed_data->qf_rhs_vol); 280a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "q", num_comp_q, CEED_EVAL_INTERP); 281a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "dq", num_comp_q*dim, 282a515125bSLeila Ghaffari CEED_EVAL_GRAD); 2833b1e209bSJeremy L Thompson CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "qdata", q_data_size_vol, 284a515125bSLeila Ghaffari CEED_EVAL_NONE); 285a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "x", num_comp_x, CEED_EVAL_INTERP); 286a515125bSLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_rhs_vol, "v", num_comp_q, 287a515125bSLeila Ghaffari CEED_EVAL_INTERP); 288a515125bSLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_rhs_vol, "dv", num_comp_q*dim, 289a515125bSLeila Ghaffari CEED_EVAL_GRAD); 290a515125bSLeila Ghaffari } 291a515125bSLeila Ghaffari 292a515125bSLeila Ghaffari // -- Create QFunction for IFunction 293a515125bSLeila Ghaffari if (problem->apply_vol_ifunction) { 294a515125bSLeila Ghaffari CeedQFunctionCreateInterior(ceed, 1, problem->apply_vol_ifunction, 295a515125bSLeila Ghaffari problem->apply_vol_ifunction_loc, &ceed_data->qf_ifunction_vol); 296a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "q", num_comp_q, 297a515125bSLeila Ghaffari CEED_EVAL_INTERP); 298a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "dq", num_comp_q*dim, 299a515125bSLeila Ghaffari CEED_EVAL_GRAD); 3003b1e209bSJeremy L Thompson CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "q dot", num_comp_q, 301a515125bSLeila Ghaffari CEED_EVAL_INTERP); 3023b1e209bSJeremy L Thompson CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "qdata", q_data_size_vol, 303a515125bSLeila Ghaffari CEED_EVAL_NONE); 304a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "x", num_comp_x, 305a515125bSLeila Ghaffari CEED_EVAL_INTERP); 306a515125bSLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_ifunction_vol, "v", num_comp_q, 307a515125bSLeila Ghaffari CEED_EVAL_INTERP); 308a515125bSLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_ifunction_vol, "dv", num_comp_q*dim, 309a515125bSLeila Ghaffari CEED_EVAL_GRAD); 310a515125bSLeila Ghaffari } 311a515125bSLeila Ghaffari 312a515125bSLeila Ghaffari // --------------------------------------------------------------------------- 313a515125bSLeila Ghaffari // Element coordinates 314a515125bSLeila Ghaffari // --------------------------------------------------------------------------- 315a515125bSLeila Ghaffari // -- Create CEED vector 316a515125bSLeila Ghaffari CeedElemRestrictionCreateVector(ceed_data->elem_restr_x, &ceed_data->x_coord, 317a515125bSLeila Ghaffari NULL); 318a515125bSLeila Ghaffari 319a515125bSLeila Ghaffari // -- Copy PETSc vector in CEED vector 320a515125bSLeila Ghaffari Vec X_loc; 321a515125bSLeila Ghaffari const PetscScalar *X_loc_array; 322a515125bSLeila Ghaffari ierr = DMGetCoordinatesLocal(dm, &X_loc); CHKERRQ(ierr); 32305a512bdSLeila Ghaffari ierr = VecScale(X_loc, problem->dm_scale); CHKERRQ(ierr); 324a515125bSLeila Ghaffari ierr = VecGetArrayRead(X_loc, &X_loc_array); CHKERRQ(ierr); 325a515125bSLeila Ghaffari CeedVectorSetArray(ceed_data->x_coord, CEED_MEM_HOST, CEED_COPY_VALUES, 326a515125bSLeila Ghaffari (PetscScalar *)X_loc_array); 327a515125bSLeila Ghaffari ierr = VecRestoreArrayRead(X_loc, &X_loc_array); CHKERRQ(ierr); 328a515125bSLeila Ghaffari 329a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 330a515125bSLeila Ghaffari // CEED vectors 331a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 332a515125bSLeila Ghaffari // -- Create CEED vector for geometric data 333a515125bSLeila Ghaffari CeedInt num_qpts_vol; 334a515125bSLeila Ghaffari PetscInt loc_num_elem_vol; 335a515125bSLeila Ghaffari CeedBasisGetNumQuadraturePoints(ceed_data->basis_q, &num_qpts_vol); 336a515125bSLeila Ghaffari CeedElemRestrictionGetNumElements(ceed_data->elem_restr_q, &loc_num_elem_vol); 337a515125bSLeila Ghaffari CeedVectorCreate(ceed, q_data_size_vol*loc_num_elem_vol*num_qpts_vol, 338a515125bSLeila Ghaffari &ceed_data->q_data); 339a515125bSLeila Ghaffari 340a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 341a515125bSLeila Ghaffari // CEED Operators 342a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 343a515125bSLeila Ghaffari // -- Create CEED operator for quadrature data 344a515125bSLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_setup_vol, NULL, NULL, 345a515125bSLeila Ghaffari &ceed_data->op_setup_vol); 346a515125bSLeila Ghaffari CeedOperatorSetField(ceed_data->op_setup_vol, "dx", ceed_data->elem_restr_x, 347a515125bSLeila Ghaffari ceed_data->basis_x, CEED_VECTOR_ACTIVE); 348a515125bSLeila Ghaffari CeedOperatorSetField(ceed_data->op_setup_vol, "weight", 349139613f2SLeila Ghaffari CEED_ELEMRESTRICTION_NONE, ceed_data->basis_x, CEED_VECTOR_NONE); 3503b1e209bSJeremy L Thompson CeedOperatorSetField(ceed_data->op_setup_vol, "qdata", 351139613f2SLeila Ghaffari ceed_data->elem_restr_qd_i, CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE); 352a515125bSLeila Ghaffari 353a515125bSLeila Ghaffari // -- Create CEED operator for ICs 354a515125bSLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_ics, NULL, NULL, &ceed_data->op_ics); 355a515125bSLeila Ghaffari CeedOperatorSetField(ceed_data->op_ics, "x", ceed_data->elem_restr_x, 356a515125bSLeila Ghaffari ceed_data->basis_xc, CEED_VECTOR_ACTIVE); 357a515125bSLeila Ghaffari CeedOperatorSetField(ceed_data->op_ics, "q0", ceed_data->elem_restr_q, 358a515125bSLeila Ghaffari CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE); 359a515125bSLeila Ghaffari 360a515125bSLeila Ghaffari // Create CEED operator for RHS 361a515125bSLeila Ghaffari if (ceed_data->qf_rhs_vol) { 362a515125bSLeila Ghaffari CeedOperator op; 363a515125bSLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_rhs_vol, NULL, NULL, &op); 364a515125bSLeila Ghaffari CeedOperatorSetField(op, "q", ceed_data->elem_restr_q, ceed_data->basis_q, 365a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 366a515125bSLeila Ghaffari CeedOperatorSetField(op, "dq", ceed_data->elem_restr_q, ceed_data->basis_q, 367a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 3683b1e209bSJeremy L Thompson CeedOperatorSetField(op, "qdata", ceed_data->elem_restr_qd_i, 369139613f2SLeila Ghaffari CEED_BASIS_COLLOCATED, ceed_data->q_data); 370a515125bSLeila Ghaffari CeedOperatorSetField(op, "x", ceed_data->elem_restr_x, ceed_data->basis_x, 371a515125bSLeila Ghaffari ceed_data->x_coord); 372a515125bSLeila Ghaffari CeedOperatorSetField(op, "v", ceed_data->elem_restr_q, ceed_data->basis_q, 373a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 374a515125bSLeila Ghaffari CeedOperatorSetField(op, "dv", ceed_data->elem_restr_q, ceed_data->basis_q, 375a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 376a515125bSLeila Ghaffari user->op_rhs_vol = op; 377a515125bSLeila Ghaffari } 378a515125bSLeila Ghaffari 379a515125bSLeila Ghaffari // -- CEED operator for IFunction 380a515125bSLeila Ghaffari if (ceed_data->qf_ifunction_vol) { 381a515125bSLeila Ghaffari CeedOperator op; 382a515125bSLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_ifunction_vol, NULL, NULL, &op); 383a515125bSLeila Ghaffari CeedOperatorSetField(op, "q", ceed_data->elem_restr_q, ceed_data->basis_q, 384a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 385a515125bSLeila Ghaffari CeedOperatorSetField(op, "dq", ceed_data->elem_restr_q, ceed_data->basis_q, 386a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 3873b1e209bSJeremy L Thompson CeedOperatorSetField(op, "q dot", ceed_data->elem_restr_q, ceed_data->basis_q, 388a515125bSLeila Ghaffari user->q_dot_ceed); 3893b1e209bSJeremy L Thompson CeedOperatorSetField(op, "qdata", ceed_data->elem_restr_qd_i, 390139613f2SLeila Ghaffari CEED_BASIS_COLLOCATED, ceed_data->q_data); 391a515125bSLeila Ghaffari CeedOperatorSetField(op, "x", ceed_data->elem_restr_x, ceed_data->basis_x, 392a515125bSLeila Ghaffari ceed_data->x_coord); 393a515125bSLeila Ghaffari CeedOperatorSetField(op, "v", ceed_data->elem_restr_q, ceed_data->basis_q, 394a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 395a515125bSLeila Ghaffari CeedOperatorSetField(op, "dv", ceed_data->elem_restr_q, ceed_data->basis_q, 396a515125bSLeila Ghaffari CEED_VECTOR_ACTIVE); 397a515125bSLeila Ghaffari user->op_ifunction_vol = op; 398a515125bSLeila Ghaffari } 399a515125bSLeila Ghaffari 400a515125bSLeila Ghaffari // ***************************************************************************** 401a515125bSLeila Ghaffari // Set up CEED objects for the exterior domain (surface) 402a515125bSLeila Ghaffari // ***************************************************************************** 403a515125bSLeila Ghaffari CeedInt height = 1, 404a515125bSLeila Ghaffari dim_sur = dim - height, 405a515125bSLeila Ghaffari P_sur = app_ctx->degree + 1, 406a515125bSLeila Ghaffari Q_sur = P_sur + app_ctx->q_extra; 407a515125bSLeila Ghaffari const CeedInt q_data_size_sur = problem->q_data_size_sur; 408a515125bSLeila Ghaffari 409a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 410a515125bSLeila Ghaffari // CEED Bases 411a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 412a515125bSLeila Ghaffari CeedBasisCreateTensorH1Lagrange(ceed, dim_sur, num_comp_q, P_sur, Q_sur, 413a515125bSLeila Ghaffari CEED_GAUSS, &ceed_data->basis_q_sur); 414a515125bSLeila Ghaffari CeedBasisCreateTensorH1Lagrange(ceed, dim_sur, num_comp_x, 2, Q_sur, CEED_GAUSS, 415a515125bSLeila Ghaffari &ceed_data->basis_x_sur); 416a515125bSLeila Ghaffari 417a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 418a515125bSLeila Ghaffari // CEED QFunctions 419a515125bSLeila Ghaffari // ----------------------------------------------------------------------------- 420a515125bSLeila Ghaffari // -- Create QFunction for quadrature data 421a515125bSLeila Ghaffari CeedQFunctionCreateInterior(ceed, 1, problem->setup_sur, problem->setup_sur_loc, 422a515125bSLeila Ghaffari &ceed_data->qf_setup_sur); 423a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_setup_sur, "dx", num_comp_x*dim_sur, 424a515125bSLeila Ghaffari CEED_EVAL_GRAD); 425a515125bSLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_setup_sur, "weight", 1, CEED_EVAL_WEIGHT); 4263b1e209bSJeremy L Thompson CeedQFunctionAddOutput(ceed_data->qf_setup_sur, "surface qdata", 427*002797a3SLeila Ghaffari q_data_size_sur, CEED_EVAL_NONE); 428a515125bSLeila Ghaffari 429*002797a3SLeila Ghaffari // -- Creat QFunction for inflow boundaries 430*002797a3SLeila Ghaffari if (problem->apply_inflow) { 431*002797a3SLeila Ghaffari CeedQFunctionCreateInterior(ceed, 1, problem->apply_inflow, 432*002797a3SLeila Ghaffari problem->apply_inflow_loc, &ceed_data->qf_apply_inflow); 433*002797a3SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "q", num_comp_q, 434a515125bSLeila Ghaffari CEED_EVAL_INTERP); 435*002797a3SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "surface qdata", 436*002797a3SLeila Ghaffari q_data_size_sur, CEED_EVAL_NONE); 437*002797a3SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "x", num_comp_x, 438a515125bSLeila Ghaffari CEED_EVAL_INTERP); 439*002797a3SLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_apply_inflow, "v", num_comp_q, 440*002797a3SLeila Ghaffari CEED_EVAL_INTERP); 441*002797a3SLeila Ghaffari } 442*002797a3SLeila Ghaffari 443*002797a3SLeila Ghaffari // -- Creat QFunction for outflow boundaries 444*002797a3SLeila Ghaffari if (problem->apply_outflow) { 445*002797a3SLeila Ghaffari CeedQFunctionCreateInterior(ceed, 1, problem->apply_outflow, 446*002797a3SLeila Ghaffari problem->apply_outflow_loc, &ceed_data->qf_apply_outflow); 447*002797a3SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "q", num_comp_q, 448*002797a3SLeila Ghaffari CEED_EVAL_INTERP); 449*002797a3SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "surface qdata", 450*002797a3SLeila Ghaffari q_data_size_sur, CEED_EVAL_NONE); 451*002797a3SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "x", num_comp_x, 452*002797a3SLeila Ghaffari CEED_EVAL_INTERP); 453*002797a3SLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_apply_outflow, "v", num_comp_q, 454a515125bSLeila Ghaffari CEED_EVAL_INTERP); 455a515125bSLeila Ghaffari } 456a515125bSLeila Ghaffari 457a515125bSLeila Ghaffari // ***************************************************************************** 458a515125bSLeila Ghaffari // CEED Operator Apply 459a515125bSLeila Ghaffari // ***************************************************************************** 460a515125bSLeila Ghaffari // -- Apply CEED Operator for the geometric data 461a515125bSLeila Ghaffari CeedOperatorApply(ceed_data->op_setup_vol, ceed_data->x_coord, 462a515125bSLeila Ghaffari ceed_data->q_data, CEED_REQUEST_IMMEDIATE); 463a515125bSLeila Ghaffari 464a515125bSLeila Ghaffari // -- Create and apply CEED Composite Operator for the entire domain 465a515125bSLeila Ghaffari if (!user->phys->implicit) { // RHS 466a515125bSLeila Ghaffari ierr = CreateOperatorForDomain(ceed, dm, bc, ceed_data, user->phys, 467a515125bSLeila Ghaffari user->op_rhs_vol, height, P_sur, Q_sur, 468a515125bSLeila Ghaffari q_data_size_sur, &user->op_rhs); CHKERRQ(ierr); 469a515125bSLeila Ghaffari } else { // IFunction 470a515125bSLeila Ghaffari ierr = CreateOperatorForDomain(ceed, dm, bc, ceed_data, user->phys, 471a515125bSLeila Ghaffari user->op_ifunction_vol, height, P_sur, Q_sur, 472a515125bSLeila Ghaffari q_data_size_sur, &user->op_ifunction); CHKERRQ(ierr); 473a515125bSLeila Ghaffari } 474a515125bSLeila Ghaffari 475a515125bSLeila Ghaffari PetscFunctionReturn(0); 476a515125bSLeila Ghaffari } 477