1dae7673aSJames Wright // SPDX-FileCopyrightText: Copyright (c) 2017-2024, HONEE contributors.
2dae7673aSJames Wright // SPDX-License-Identifier: Apache-2.0 OR BSD-2-Clause
3dae7673aSJames Wright /// @file
4dae7673aSJames Wright /// Functions for setting up and performing spanwise-statistics collection
5dae7673aSJames Wright ///
6dae7673aSJames Wright /// "Parent" refers to the 2D plane on which statistics are collected *onto*.
7dae7673aSJames Wright /// "Child" refers to the 3D domain where statistics are gathered *from*.
8dae7673aSJames Wright /// Each quadrature point on the parent plane has several children in the child domain that it performs spanwise averaging with.
9dae7673aSJames Wright
10dae7673aSJames Wright #include <ceed.h>
11dae7673aSJames Wright #include <petscdmplex.h>
12dae7673aSJames Wright #include <petscsf.h>
13dae7673aSJames Wright #include <spanstats.h>
14dae7673aSJames Wright
15dae7673aSJames Wright #include <navierstokes.h>
16dae7673aSJames Wright #include <petsc_ops.h>
17dae7673aSJames Wright
SpanStatsCtxDestroy(SpanStatsCtx * spanstats)185206a5a0SJames Wright PetscErrorCode SpanStatsCtxDestroy(SpanStatsCtx *spanstats) {
195206a5a0SJames Wright SpanStatsCtx spanstats_ = *spanstats;
20dae7673aSJames Wright
21dae7673aSJames Wright PetscFunctionBeginUser;
225206a5a0SJames Wright if (spanstats_ == NULL) PetscFunctionReturn(PETSC_SUCCESS);
235206a5a0SJames Wright PetscCall(VecDestroy(&spanstats_->Child_Stats_loc));
245206a5a0SJames Wright PetscCall(VecDestroy(&spanstats_->Parent_Stats_loc));
25dae7673aSJames Wright
265206a5a0SJames Wright PetscCall(OperatorApplyContextDestroy(spanstats_->op_stats_collect_ctx));
275206a5a0SJames Wright PetscCall(OperatorApplyContextDestroy(spanstats_->op_proj_rhs_ctx));
285206a5a0SJames Wright PetscCall(OperatorApplyContextDestroy(spanstats_->mms_error_ctx));
29dae7673aSJames Wright
305206a5a0SJames Wright PetscCall(KSPDestroy(&spanstats_->ksp));
315206a5a0SJames Wright PetscCall(PetscSFDestroy(&spanstats_->sf));
325206a5a0SJames Wright PetscCall(DMDestroy(&spanstats_->dm));
335206a5a0SJames Wright PetscCall(PetscFree(spanstats_->prefix));
345206a5a0SJames Wright PetscCall(PetscFree(spanstats_));
355206a5a0SJames Wright *spanstats = NULL;
36dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS);
37dae7673aSJames Wright }
38dae7673aSJames Wright
SpanwiseStatisticssCreateDM(Honee honee,SpanStatsCtx spanstats,PetscInt degree,PetscInt num_comps)39dae7673aSJames Wright static PetscErrorCode SpanwiseStatisticssCreateDM(Honee honee, SpanStatsCtx spanstats, PetscInt degree, PetscInt num_comps) {
40dae7673aSJames Wright PetscReal domain_min[3], domain_max[3];
41dae7673aSJames Wright PetscLogStage stage_stats_setup;
42dae7673aSJames Wright MPI_Comm comm = PetscObjectComm((PetscObject)honee->dm);
43dae7673aSJames Wright
44dae7673aSJames Wright PetscFunctionBeginUser;
45dae7673aSJames Wright PetscCall(PetscLogStageGetId("Stats Setup", &stage_stats_setup));
46dae7673aSJames Wright if (stage_stats_setup == -1) PetscCall(PetscLogStageRegister("Stats Setup", &stage_stats_setup));
47dae7673aSJames Wright PetscCall(PetscLogStagePush(stage_stats_setup));
48dae7673aSJames Wright
49dae7673aSJames Wright spanstats->num_comp_stats = num_comps;
50dae7673aSJames Wright
51dae7673aSJames Wright // Get spanwise length
52dae7673aSJames Wright PetscCall(DMGetBoundingBox(honee->dm, domain_min, domain_max));
53dae7673aSJames Wright spanstats->span_width = domain_max[2] - domain_min[2];
54dae7673aSJames Wright
55dae7673aSJames Wright { // Get DM from surface
56dae7673aSJames Wright DM parent_distributed_dm;
57dae7673aSJames Wright const PetscSF *isoperiodicface;
58dae7673aSJames Wright PetscInt num_isoperiodicface;
59dae7673aSJames Wright DMLabel label;
60dae7673aSJames Wright PetscMPIInt size;
61dae7673aSJames Wright
62dae7673aSJames Wright PetscCall(DMPlexGetIsoperiodicFaceSF(honee->dm, &num_isoperiodicface, &isoperiodicface));
63dae7673aSJames Wright
64dae7673aSJames Wright if (isoperiodicface) {
65dae7673aSJames Wright PetscSF inv_isoperiodicface;
66dae7673aSJames Wright PetscInt nleaves, isoperiodicface_index = -1;
67dae7673aSJames Wright const PetscInt *ilocal;
68dae7673aSJames Wright char isoperiodicface_key[1024];
69dae7673aSJames Wright
70dae7673aSJames Wright PetscCall(PetscSNPrintf(isoperiodicface_key, sizeof isoperiodicface_key, "-%sisoperiodic_facesf", spanstats->prefix));
71dae7673aSJames Wright PetscCall(PetscOptionsGetInt(NULL, NULL, isoperiodicface_key, &isoperiodicface_index, NULL));
72dae7673aSJames Wright isoperiodicface_index = isoperiodicface_index == -1 ? num_isoperiodicface - 1 : isoperiodicface_index;
73dae7673aSJames Wright PetscCall(PetscSFCreateInverseSF(isoperiodicface[isoperiodicface_index], &inv_isoperiodicface));
74dae7673aSJames Wright PetscCall(PetscSFGetGraph(inv_isoperiodicface, NULL, &nleaves, &ilocal, NULL));
75dae7673aSJames Wright PetscCall(DMCreateLabel(honee->dm, "Periodic Face"));
76dae7673aSJames Wright PetscCall(DMGetLabel(honee->dm, "Periodic Face", &label));
77dae7673aSJames Wright for (PetscInt i = 0; i < nleaves; i++) {
78dae7673aSJames Wright PetscCall(DMLabelSetValue(label, ilocal[i], 1));
79dae7673aSJames Wright }
80dae7673aSJames Wright PetscCall(PetscSFDestroy(&inv_isoperiodicface));
81dae7673aSJames Wright } else {
82dae7673aSJames Wright PetscCall(DMGetLabel(honee->dm, "Face Sets", &label));
83dae7673aSJames Wright }
84dae7673aSJames Wright
85dae7673aSJames Wright PetscCall(DMPlexLabelComplete(honee->dm, label));
86*240d24bdSJames Wright PetscCall(DMPlexFilter(honee->dm, label, 1, PETSC_FALSE, PETSC_FALSE, PetscObjectComm((PetscObject)honee->dm), NULL, &spanstats->dm));
87dae7673aSJames Wright PetscCall(DMSetCoordinateDisc(spanstats->dm, NULL, PETSC_FALSE, PETSC_TRUE)); // Ensure that a coordinate FE exists
88dae7673aSJames Wright
89dae7673aSJames Wright PetscCall(DMPlexDistribute(spanstats->dm, 0, NULL, &parent_distributed_dm));
90dae7673aSJames Wright PetscCallMPI(MPI_Comm_size(comm, &size));
91dae7673aSJames Wright if (parent_distributed_dm) {
92dae7673aSJames Wright PetscCall(DMDestroy(&spanstats->dm));
93dae7673aSJames Wright spanstats->dm = parent_distributed_dm;
94dae7673aSJames Wright } else if (size > 1) {
95dae7673aSJames Wright PetscCall(PetscPrintf(comm, "WARNING: Spanwise statistics: parent DM could not be distributed accross %d ranks.\n", size));
96dae7673aSJames Wright }
97dae7673aSJames Wright }
98dae7673aSJames Wright {
99dae7673aSJames Wright PetscBool is_simplex = PETSC_FALSE;
100dae7673aSJames Wright PetscCall(DMPlexIsSimplex(spanstats->dm, &is_simplex));
101dae7673aSJames Wright PetscCheck(is_simplex != PETSC_TRUE, comm, PETSC_ERR_ARG_WRONGSTATE, "Spanwise statistics is not implemented for non-tensor product grids");
102dae7673aSJames Wright }
103dae7673aSJames Wright
104dae7673aSJames Wright PetscCall(PetscObjectSetName((PetscObject)spanstats->dm, "Spanwise_Stats"));
105dae7673aSJames Wright PetscCall(DMSetOptionsPrefix(spanstats->dm, spanstats->prefix));
106dae7673aSJames Wright PetscCall(DMSetFromOptions(spanstats->dm));
107dae7673aSJames Wright PetscCall(DMViewFromOptions(spanstats->dm, NULL, "-dm_view"));
108dae7673aSJames Wright
109dae7673aSJames Wright // Create FE space for parent DM
1109eadbee4SJames Wright PetscCall(DMSetupByOrder_FEM(PETSC_TRUE, PETSC_TRUE, honee->app_ctx->degree, 1, honee->app_ctx->q_extra, 1, &spanstats->num_comp_stats,
1119eadbee4SJames Wright spanstats->dm));
112dae7673aSJames Wright
113dae7673aSJames Wright PetscCall(PetscLogStagePop());
114dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS);
115dae7673aSJames Wright }
116dae7673aSJames Wright
117dae7673aSJames Wright /** @brief Create CeedElemRestriction for collocated data in component-major order.
118dae7673aSJames Wright a. Sets the strides of the restriction to component-major order
119dae7673aSJames Wright Number of quadrature points is used from the CeedBasis, and number of elements is used from the CeedElemRestriction.
120dae7673aSJames Wright */
CreateElemRestrColloc_CompMajor(Ceed ceed,CeedInt num_comp,CeedBasis basis,CeedElemRestriction elem_restr_base,CeedElemRestriction * elem_restr_collocated)121dae7673aSJames Wright static PetscErrorCode CreateElemRestrColloc_CompMajor(Ceed ceed, CeedInt num_comp, CeedBasis basis, CeedElemRestriction elem_restr_base,
122dae7673aSJames Wright CeedElemRestriction *elem_restr_collocated) {
123dae7673aSJames Wright CeedInt num_elem_qpts, loc_num_elem;
124dae7673aSJames Wright
125dae7673aSJames Wright PetscFunctionBeginUser;
126dae7673aSJames Wright PetscCallCeed(ceed, CeedBasisGetNumQuadraturePoints(basis, &num_elem_qpts));
127dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionGetNumElements(elem_restr_base, &loc_num_elem));
128dae7673aSJames Wright
129dae7673aSJames Wright const CeedInt strides[] = {num_comp, 1, num_elem_qpts * num_comp};
130dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionCreateStrided(ceed, loc_num_elem, num_elem_qpts, num_comp, num_comp * loc_num_elem * num_elem_qpts, strides,
131dae7673aSJames Wright elem_restr_collocated));
132dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS);
133dae7673aSJames Wright }
134dae7673aSJames Wright
135dae7673aSJames Wright // Get coordinates of quadrature points
GetQuadratureCoords(Ceed ceed,DM dm,DMLabel domain_label,PetscInt label_value,PetscInt height,Vec * Qx_coords,PetscInt * total_nqpnts)1364fe35dceSJames Wright static PetscErrorCode GetQuadratureCoords(Ceed ceed, DM dm, DMLabel domain_label, PetscInt label_value, PetscInt height, Vec *Qx_coords,
137dae7673aSJames Wright PetscInt *total_nqpnts) {
1384fe35dceSJames Wright CeedElemRestriction elem_restr_qx, elem_restr_x;
1394fe35dceSJames Wright CeedBasis basis_x;
1404fe35dceSJames Wright CeedVector x_coords;
141dae7673aSJames Wright CeedQFunction qf_quad_coords;
142dae7673aSJames Wright CeedOperator op_quad_coords;
143dae7673aSJames Wright CeedInt num_comp_x;
144dae7673aSJames Wright CeedSize l_vec_size;
145dae7673aSJames Wright OperatorApplyContext op_quad_coords_ctx;
146dae7673aSJames Wright
147dae7673aSJames Wright PetscFunctionBeginUser;
1484fe35dceSJames Wright PetscCall(DMPlexCeedCoordinateCreateField(ceed, dm, domain_label, label_value, height, &elem_restr_x, &basis_x, &x_coords));
149dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionGetNumComponents(elem_restr_x, &num_comp_x));
150dae7673aSJames Wright PetscCall(CreateElemRestrColloc_CompMajor(ceed, num_comp_x, basis_x, elem_restr_x, &elem_restr_qx));
151dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionGetLVectorSize(elem_restr_qx, &l_vec_size));
152dae7673aSJames Wright *total_nqpnts = l_vec_size / num_comp_x;
153dae7673aSJames Wright
154dae7673aSJames Wright // Create QFunction
155dae7673aSJames Wright PetscCallCeed(ceed, CeedQFunctionCreateIdentity(ceed, num_comp_x, CEED_EVAL_INTERP, CEED_EVAL_NONE, &qf_quad_coords));
156dae7673aSJames Wright
157dae7673aSJames Wright // Create Operator
158dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_quad_coords, NULL, NULL, &op_quad_coords));
159dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorSetField(op_quad_coords, "input", elem_restr_x, basis_x, x_coords));
160dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorSetField(op_quad_coords, "output", elem_restr_qx, CEED_BASIS_NONE, CEED_VECTOR_ACTIVE));
161dae7673aSJames Wright
162dae7673aSJames Wright PetscCall(CeedOperatorCreateLocalVecs(op_quad_coords, DMReturnVecType(dm), PETSC_COMM_SELF, NULL, Qx_coords));
163dae7673aSJames Wright PetscCall(OperatorApplyContextCreate(NULL, NULL, ceed, op_quad_coords, CEED_VECTOR_NONE, NULL, NULL, NULL, &op_quad_coords_ctx));
164dae7673aSJames Wright
165dae7673aSJames Wright PetscCall(ApplyCeedOperatorLocalToLocal(NULL, *Qx_coords, op_quad_coords_ctx));
166dae7673aSJames Wright
167dae7673aSJames Wright PetscCall(OperatorApplyContextDestroy(op_quad_coords_ctx));
168dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&elem_restr_qx));
1694fe35dceSJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&elem_restr_x));
1704fe35dceSJames Wright PetscCallCeed(ceed, CeedBasisDestroy(&basis_x));
1714fe35dceSJames Wright PetscCallCeed(ceed, CeedVectorDestroy(&x_coords));
172dae7673aSJames Wright PetscCallCeed(ceed, CeedQFunctionDestroy(&qf_quad_coords));
173dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorDestroy(&op_quad_coords));
174dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS);
175dae7673aSJames Wright }
176dae7673aSJames Wright
SpanwiseStatisticsSetupDataCreate(Honee honee,SpanStatsCtx spanstats,SpanStatsSetupData * stats_setup_data)177dae7673aSJames Wright static PetscErrorCode SpanwiseStatisticsSetupDataCreate(Honee honee, SpanStatsCtx spanstats, SpanStatsSetupData *stats_setup_data) {
178dae7673aSJames Wright Ceed ceed = honee->ceed;
179dae7673aSJames Wright DM dm = spanstats->dm;
180dae7673aSJames Wright Vec X_loc;
181dae7673aSJames Wright CeedInt num_comp_x, num_comp_stats = spanstats->num_comp_stats;
182e3db12f8SJames Wright PetscInt height = 0, dm_field = 0;
183cf8f12c8SJames Wright CeedElemRestriction elem_restr_q;
184cf8f12c8SJames Wright CeedBasis basis_q;
185dae7673aSJames Wright
186dae7673aSJames Wright PetscFunctionBeginUser;
187dae7673aSJames Wright PetscCall(PetscNew(stats_setup_data));
188dae7673aSJames Wright
189e3db12f8SJames Wright PetscCall(DMPlexCeedElemRestrictionCreate(ceed, dm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, height, dm_field,
190e3db12f8SJames Wright &(*stats_setup_data)->elem_restr_parent_stats));
191e3db12f8SJames Wright PetscCall(DMPlexCeedElemRestrictionCoordinateCreate(ceed, dm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, height,
192e3db12f8SJames Wright &(*stats_setup_data)->elem_restr_parent_x));
193dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionGetNumComponents((*stats_setup_data)->elem_restr_parent_x, &num_comp_x));
194dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionCreateVector((*stats_setup_data)->elem_restr_parent_x, &(*stats_setup_data)->x_coord, NULL));
195e3db12f8SJames Wright PetscCall(DMPlexCeedBasisCoordinateCreate(ceed, dm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, height, &(*stats_setup_data)->basis_x));
196e3db12f8SJames Wright PetscCall(DMPlexCeedBasisCreate(ceed, dm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, height, dm_field, &(*stats_setup_data)->basis_stats));
197dae7673aSJames Wright
198dae7673aSJames Wright PetscCall(CreateElemRestrColloc_CompMajor(ceed, num_comp_stats, (*stats_setup_data)->basis_stats, (*stats_setup_data)->elem_restr_parent_stats,
199dae7673aSJames Wright &(*stats_setup_data)->elem_restr_parent_colloc));
200cf8f12c8SJames Wright PetscCall(DMPlexCeedElemRestrictionCreate(ceed, honee->dm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, 0, 0, &elem_restr_q));
201cf8f12c8SJames Wright PetscCall(DMPlexCeedBasisCreate(ceed, honee->dm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, 0, 0, &basis_q));
202cf8f12c8SJames Wright PetscCall(CreateElemRestrColloc_CompMajor(ceed, num_comp_stats, basis_q, elem_restr_q, &(*stats_setup_data)->elem_restr_child_colloc));
203cf8f12c8SJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&elem_restr_q));
204cf8f12c8SJames Wright PetscCallCeed(ceed, CeedBasisDestroy(&basis_q));
205dae7673aSJames Wright
206dae7673aSJames Wright { // -- Copy DM coordinates into CeedVector
207dae7673aSJames Wright DM cdm;
208dae7673aSJames Wright PetscCall(DMGetCellCoordinateDM(dm, &cdm));
209dae7673aSJames Wright if (cdm) {
210dae7673aSJames Wright PetscCall(DMGetCellCoordinatesLocal(dm, &X_loc));
211dae7673aSJames Wright } else {
212dae7673aSJames Wright PetscCall(DMGetCoordinatesLocal(dm, &X_loc));
213dae7673aSJames Wright }
214dae7673aSJames Wright }
215755bbe25SJames Wright // Do not need to scale the coordinates. The DMClone operation has already copied the scaled coordinates
216dae7673aSJames Wright PetscCall(VecCopyPetscToCeed(X_loc, (*stats_setup_data)->x_coord));
217dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS);
218dae7673aSJames Wright }
219dae7673aSJames Wright
SpanwiseStatisticsSetupDataDestroy(SpanStatsSetupData data)220dae7673aSJames Wright static PetscErrorCode SpanwiseStatisticsSetupDataDestroy(SpanStatsSetupData data) {
221dae7673aSJames Wright Ceed ceed;
222dae7673aSJames Wright
223dae7673aSJames Wright PetscFunctionBeginUser;
224dae7673aSJames Wright PetscCall(CeedElemRestrictionGetCeed(data->elem_restr_parent_x, &ceed));
225dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&data->elem_restr_parent_x));
226dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&data->elem_restr_parent_stats));
227dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&data->elem_restr_parent_colloc));
228dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&data->elem_restr_child_colloc));
229dae7673aSJames Wright PetscCallCeed(ceed, CeedBasisDestroy(&data->basis_x));
230dae7673aSJames Wright PetscCallCeed(ceed, CeedBasisDestroy(&data->basis_stats));
231dae7673aSJames Wright PetscCallCeed(ceed, CeedVectorDestroy(&data->x_coord));
232dae7673aSJames Wright PetscCall(PetscFree(data));
233dae7673aSJames Wright PetscCheck(CeedDestroy(&ceed) == CEED_ERROR_SUCCESS, PETSC_COMM_SELF, PETSC_ERR_LIB, "Destroying Ceed object failed");
234dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS);
235dae7673aSJames Wright }
236dae7673aSJames Wright
237dae7673aSJames Wright // Create PetscSF for child-to-parent communication
SpanwiseStatisticsCreateSF(Honee honee,SpanStatsCtx spanstats,SpanStatsSetupData stats_setup_data,DM parentdm,DM childdm,PetscSF * statssf)238b4598da8SJames Wright static PetscErrorCode SpanwiseStatisticsCreateSF(Honee honee, SpanStatsCtx spanstats, SpanStatsSetupData stats_setup_data, DM parentdm, DM childdm,
239b4598da8SJames Wright PetscSF *statssf) {
240dae7673aSJames Wright Ceed ceed = honee->ceed;
2414fe35dceSJames Wright PetscInt child_num_qpnts, parent_num_qpnts, num_comp_x;
242dae7673aSJames Wright Vec Child_qx_coords, Parent_qx_coords;
243dae7673aSJames Wright
244dae7673aSJames Wright PetscFunctionBeginUser;
245dae7673aSJames Wright PetscCall(PetscSFCreate(PetscObjectComm((PetscObject)childdm), statssf));
246dae7673aSJames Wright
247dae7673aSJames Wright // Assume that child and parent have the same number of components
2484fe35dceSJames Wright PetscCall(DMGetCoordinateNumComps(childdm, &num_comp_x));
249dae7673aSJames Wright const PetscInt num_comp_sf = num_comp_x - 1; // Number of coord components used in the creation of the SF
250dae7673aSJames Wright
251dae7673aSJames Wright // Get quad_coords for child and parent DM
2524fe35dceSJames Wright PetscCall(GetQuadratureCoords(ceed, childdm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, 0, &Child_qx_coords, &child_num_qpnts));
2534fe35dceSJames Wright PetscCall(GetQuadratureCoords(ceed, parentdm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, 0, &Parent_qx_coords, &parent_num_qpnts));
254dae7673aSJames Wright
255dae7673aSJames Wright { // Remove z component of coordinates for matching
256dae7673aSJames Wright const PetscReal *child_quad_coords, *parent_quad_coords;
257dae7673aSJames Wright PetscReal *child_coords, *parent_coords;
258dae7673aSJames Wright
259dae7673aSJames Wright PetscCall(VecGetArrayRead(Child_qx_coords, &child_quad_coords));
260dae7673aSJames Wright PetscCall(VecGetArrayRead(Parent_qx_coords, &parent_quad_coords));
261dae7673aSJames Wright
262dae7673aSJames Wright PetscCall(PetscMalloc2(child_num_qpnts * 2, &child_coords, parent_num_qpnts * 2, &parent_coords));
263dae7673aSJames Wright for (int i = 0; i < child_num_qpnts; i++) {
264dae7673aSJames Wright child_coords[0 + i * num_comp_sf] = child_quad_coords[0 + i * num_comp_x];
265dae7673aSJames Wright child_coords[1 + i * num_comp_sf] = child_quad_coords[1 + i * num_comp_x];
266dae7673aSJames Wright }
267dae7673aSJames Wright for (int i = 0; i < parent_num_qpnts; i++) {
268dae7673aSJames Wright parent_coords[0 + i * num_comp_sf] = parent_quad_coords[0 + i * num_comp_x];
269dae7673aSJames Wright parent_coords[1 + i * num_comp_sf] = parent_quad_coords[1 + i * num_comp_x];
270dae7673aSJames Wright }
271dae7673aSJames Wright PetscCall(VecRestoreArrayRead(Child_qx_coords, &child_quad_coords));
272dae7673aSJames Wright PetscCall(VecRestoreArrayRead(Parent_qx_coords, &parent_quad_coords));
273dae7673aSJames Wright
274dae7673aSJames Wright PetscCall(PetscSFSetGraphFromCoordinates(*statssf, parent_num_qpnts, child_num_qpnts, num_comp_sf, 1e-12, parent_coords, child_coords));
275dae7673aSJames Wright PetscCall(PetscFree2(child_coords, parent_coords));
276dae7673aSJames Wright }
277dae7673aSJames Wright
278b4598da8SJames Wright {
279b4598da8SJames Wright char spanstats_sf_key[1024];
280b4598da8SJames Wright PetscCall(PetscSNPrintf(spanstats_sf_key, sizeof spanstats_sf_key, "-%ssf_view", spanstats->prefix));
281b4598da8SJames Wright PetscCall(PetscObjectSetName((PetscObject)*statssf, spanstats->prefix));
282b4598da8SJames Wright PetscCall(PetscSFViewFromOptions(*statssf, NULL, spanstats_sf_key));
283b4598da8SJames Wright }
284dae7673aSJames Wright
285dae7673aSJames Wright PetscCall(VecDestroy(&Child_qx_coords));
286dae7673aSJames Wright PetscCall(VecDestroy(&Parent_qx_coords));
287dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS);
288dae7673aSJames Wright }
289dae7673aSJames Wright
290dae7673aSJames Wright // @brief Setup RHS and LHS for L^2 projection of statistics
SpanwiseStatisticsSetupL2Projection(Honee honee,SpanStatsCtx spanstats,SpanStatsSetupData stats_setup_data)291dae7673aSJames Wright static PetscErrorCode SpanwiseStatisticsSetupL2Projection(Honee honee, SpanStatsCtx spanstats, SpanStatsSetupData stats_setup_data) {
292dae7673aSJames Wright Ceed ceed = honee->ceed;
293dae7673aSJames Wright CeedOperator op_mass, op_proj_rhs;
294dae7673aSJames Wright CeedQFunction qf_mass, qf_stats_proj;
295dae7673aSJames Wright CeedInt q_data_size, num_comp_stats = spanstats->num_comp_stats;
296dae7673aSJames Wright CeedElemRestriction elem_restr_qd;
297dae7673aSJames Wright CeedVector q_data;
298dae7673aSJames Wright
299dae7673aSJames Wright PetscFunctionBeginUser;
300dae7673aSJames Wright // -- Create Operator for RHS of L^2 projection of statistics
301dae7673aSJames Wright // Simply take collocated parent data (with quadrature weight already applied) and multiply by weight function.
302dae7673aSJames Wright // Therefore, an Identity QF is sufficient
303dae7673aSJames Wright PetscCallCeed(ceed, CeedQFunctionCreateIdentity(ceed, num_comp_stats, CEED_EVAL_NONE, CEED_EVAL_INTERP, &qf_stats_proj));
304dae7673aSJames Wright
305dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_stats_proj, NULL, NULL, &op_proj_rhs));
306dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorSetField(op_proj_rhs, "input", stats_setup_data->elem_restr_parent_colloc, CEED_BASIS_NONE, CEED_VECTOR_ACTIVE));
307dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorSetField(op_proj_rhs, "output", stats_setup_data->elem_restr_parent_stats, stats_setup_data->basis_stats,
308dae7673aSJames Wright CEED_VECTOR_ACTIVE));
309dae7673aSJames Wright
310dae7673aSJames Wright PetscCall(OperatorApplyContextCreate(NULL, spanstats->dm, ceed, op_proj_rhs, NULL, NULL, NULL, NULL, &spanstats->op_proj_rhs_ctx));
311dae7673aSJames Wright PetscCall(CeedOperatorCreateLocalVecs(op_proj_rhs, DMReturnVecType(spanstats->dm), PETSC_COMM_SELF, &spanstats->Parent_Stats_loc, NULL));
3129018c49aSJames Wright PetscCall(QDataGet(ceed, spanstats->dm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, &elem_restr_qd, &q_data, &q_data_size));
313dae7673aSJames Wright
314dae7673aSJames Wright // Create Mass CeedOperator
315dae7673aSJames Wright PetscCall(HoneeMassQFunctionCreate(ceed, num_comp_stats, q_data_size, &qf_mass));
316dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_mass, NULL, NULL, &op_mass));
317dae7673aSJames Wright PetscCallCeed(ceed,
318dae7673aSJames Wright CeedOperatorSetField(op_mass, "u", stats_setup_data->elem_restr_parent_stats, stats_setup_data->basis_stats, CEED_VECTOR_ACTIVE));
319dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorSetField(op_mass, "qdata", elem_restr_qd, CEED_BASIS_NONE, q_data));
320dae7673aSJames Wright PetscCallCeed(ceed,
321dae7673aSJames Wright CeedOperatorSetField(op_mass, "v", stats_setup_data->elem_restr_parent_stats, stats_setup_data->basis_stats, CEED_VECTOR_ACTIVE));
322dae7673aSJames Wright
323dae7673aSJames Wright { // Setup KSP for L^2 projection
324dae7673aSJames Wright Mat mat_mass;
325dae7673aSJames Wright KSP ksp;
326dae7673aSJames Wright
327dae7673aSJames Wright PetscCall(MatCreateCeed(spanstats->dm, spanstats->dm, op_mass, NULL, &mat_mass));
328dae7673aSJames Wright
329dae7673aSJames Wright PetscCall(KSPCreate(PetscObjectComm((PetscObject)spanstats->dm), &ksp));
330dae7673aSJames Wright PetscCall(KSPSetOptionsPrefix(ksp, spanstats->prefix));
331dae7673aSJames Wright {
332dae7673aSJames Wright PC pc;
333dae7673aSJames Wright PetscCall(KSPGetPC(ksp, &pc));
334dae7673aSJames Wright PetscCall(PCSetType(pc, PCJACOBI));
335dae7673aSJames Wright PetscCall(PCJacobiSetType(pc, PC_JACOBI_DIAGONAL));
336dae7673aSJames Wright PetscCall(KSPSetType(ksp, KSPCG));
337dae7673aSJames Wright PetscCall(KSPSetNormType(ksp, KSP_NORM_NATURAL));
338dae7673aSJames Wright PetscCall(KSPSetTolerances(ksp, 1e-10, PETSC_DEFAULT, PETSC_DEFAULT, PETSC_DEFAULT));
339dae7673aSJames Wright }
340dae7673aSJames Wright PetscCall(KSPSetFromOptions_WithMatCeed(ksp, mat_mass));
341dae7673aSJames Wright spanstats->ksp = ksp;
342dae7673aSJames Wright PetscCall(MatDestroy(&mat_mass));
343dae7673aSJames Wright }
344dae7673aSJames Wright
345dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&elem_restr_qd));
346dae7673aSJames Wright PetscCallCeed(ceed, CeedVectorDestroy(&q_data));
347dae7673aSJames Wright PetscCallCeed(ceed, CeedQFunctionDestroy(&qf_mass));
348dae7673aSJames Wright PetscCallCeed(ceed, CeedQFunctionDestroy(&qf_stats_proj));
349dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorDestroy(&op_mass));
350dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorDestroy(&op_proj_rhs));
351dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS);
352dae7673aSJames Wright }
353dae7673aSJames Wright
SpanwiseStatisticsSetupInitialize(Honee honee,PetscInt degree,PetscInt num_comps,const char * prefix,SpanStatsSetupData * stats_setup_data,SpanStatsCtx * spanstats)354dae7673aSJames Wright PetscErrorCode SpanwiseStatisticsSetupInitialize(Honee honee, PetscInt degree, PetscInt num_comps, const char *prefix,
35558d1351fSJames Wright SpanStatsSetupData *stats_setup_data, SpanStatsCtx *spanstats) {
356dae7673aSJames Wright PetscLogStage stage_stats_setup;
35758d1351fSJames Wright SpanStatsCtx spanstats_;
358dae7673aSJames Wright
359dae7673aSJames Wright PetscFunctionBeginUser;
360dae7673aSJames Wright PetscCall(PetscLogStageGetId("Stats Setup", &stage_stats_setup));
361dae7673aSJames Wright if (stage_stats_setup == -1) PetscCall(PetscLogStageRegister("Stats Setup", &stage_stats_setup));
362dae7673aSJames Wright PetscCall(PetscLogStagePush(stage_stats_setup));
363dae7673aSJames Wright
36458d1351fSJames Wright PetscCall(PetscNew(&spanstats_));
36558d1351fSJames Wright PetscCall(PetscStrallocpy(prefix, &spanstats_->prefix));
366dae7673aSJames Wright
36758d1351fSJames Wright spanstats_->collect_interval = 1;
36858d1351fSJames Wright PetscCall(PetscOptionsGetInt(NULL, prefix, "-collect_interval", &spanstats_->collect_interval, NULL));
369dae7673aSJames Wright
370dae7673aSJames Wright // Create parent DM
37158d1351fSJames Wright PetscCall(SpanwiseStatisticssCreateDM(honee, spanstats_, degree, num_comps));
372dae7673aSJames Wright
373dae7673aSJames Wright // Create necessary CeedObjects for setting up statistics
37458d1351fSJames Wright PetscCall(SpanwiseStatisticsSetupDataCreate(honee, spanstats_, stats_setup_data));
375dae7673aSJames Wright //
376dae7673aSJames Wright // Create SF for communicating child data back their respective parents
3774fe35dceSJames Wright PetscCall(SpanwiseStatisticsCreateSF(honee, spanstats_, *stats_setup_data, spanstats_->dm, honee->dm, &spanstats_->sf));
378dae7673aSJames Wright
37958d1351fSJames Wright *spanstats = spanstats_;
380dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS);
381dae7673aSJames Wright }
382dae7673aSJames Wright
SpanwiseStatisticsSetupFinalize(TS ts,Honee honee,SpanStatsCtx spanstats,PetscViewerAndFormat * ctx,SpanStatsSetupData * stats_setup_data)383dae7673aSJames Wright PetscErrorCode SpanwiseStatisticsSetupFinalize(TS ts, Honee honee, SpanStatsCtx spanstats, PetscViewerAndFormat *ctx,
384dae7673aSJames Wright SpanStatsSetupData *stats_setup_data) {
385dae7673aSJames Wright PetscFunctionBeginUser;
386dae7673aSJames Wright // Setup KSP and Mat for L^2 projection of statistics
387dae7673aSJames Wright PetscCall(SpanwiseStatisticsSetupL2Projection(honee, spanstats, *stats_setup_data));
388dae7673aSJames Wright
389dae7673aSJames Wright PetscCall(PetscViewerSetOptionsPrefix(ctx->viewer, spanstats->prefix));
390dae7673aSJames Wright PetscCall(PetscViewerSetFromOptions(ctx->viewer));
391dae7673aSJames Wright
392dae7673aSJames Wright PetscCall(TSGetTime(ts, &spanstats->initial_solution_time));
393dae7673aSJames Wright PetscCall(TSGetStepNumber(ts, &spanstats->initial_solution_step));
394dae7673aSJames Wright CeedScalar initial_solution_time = spanstats->initial_solution_time; // done for type conversion
395dae7673aSJames Wright PetscCallCeed(honee->ceed,
396dae7673aSJames Wright CeedOperatorSetContextDouble(spanstats->op_stats_collect_ctx->op, spanstats->previous_time_label, &initial_solution_time));
397dae7673aSJames Wright
398dae7673aSJames Wright PetscCall(SpanwiseStatisticsSetupDataDestroy(*stats_setup_data));
399dae7673aSJames Wright PetscCall(PetscLogStagePop());
400dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS);
401dae7673aSJames Wright }
402dae7673aSJames Wright
403dae7673aSJames Wright // Collect statistics based on the solution Q
SpanwiseStatisticsCollect(Honee honee,SpanStatsCtx spanstats,PetscScalar solution_time,Vec Q)404dae7673aSJames Wright PetscErrorCode SpanwiseStatisticsCollect(Honee honee, SpanStatsCtx spanstats, PetscScalar solution_time, Vec Q) {
405dae7673aSJames Wright PetscFunctionBeginUser;
406dae7673aSJames Wright PetscLogStage stage_stats_collect;
407dae7673aSJames Wright PetscCall(PetscLogStageGetId("Stats Collect", &stage_stats_collect));
408dae7673aSJames Wright if (stage_stats_collect == -1) PetscCall(PetscLogStageRegister("Stats Collect", &stage_stats_collect));
409dae7673aSJames Wright PetscCall(PetscLogStagePush(stage_stats_collect));
410dae7673aSJames Wright
411dae7673aSJames Wright PetscCall(UpdateBoundaryValues(honee, honee->Q_loc, solution_time));
412dae7673aSJames Wright PetscCallCeed(honee->ceed, CeedOperatorSetContextDouble(spanstats->op_stats_collect_ctx->op, spanstats->solution_time_label, &solution_time));
413dae7673aSJames Wright PetscCall(DMGlobalToLocal(honee->dm, Q, INSERT_VALUES, honee->Q_loc));
414dae7673aSJames Wright PetscCall(ApplyAddCeedOperatorLocalToLocal(honee->Q_loc, spanstats->Child_Stats_loc, spanstats->op_stats_collect_ctx));
415dae7673aSJames Wright
416dae7673aSJames Wright PetscCallCeed(honee->ceed, CeedOperatorSetContextDouble(spanstats->op_stats_collect_ctx->op, spanstats->previous_time_label, &solution_time));
417dae7673aSJames Wright
418dae7673aSJames Wright PetscCall(PetscLogStagePop());
419dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS);
420dae7673aSJames Wright }
421dae7673aSJames Wright
422dae7673aSJames Wright // Process the child statistics into parent statistics and project them onto stats
SpanwiseStatisticsProcess(Honee honee,SpanStatsCtx spanstats,Vec stats)423dae7673aSJames Wright PetscErrorCode SpanwiseStatisticsProcess(Honee honee, SpanStatsCtx spanstats, Vec stats) {
424dae7673aSJames Wright const PetscScalar *child_stats;
425dae7673aSJames Wright PetscScalar *parent_stats;
426dae7673aSJames Wright MPI_Datatype unit;
427dae7673aSJames Wright Vec RHS;
428dae7673aSJames Wright
429dae7673aSJames Wright PetscFunctionBeginUser;
430dae7673aSJames Wright PetscLogStage stage_stats_process;
431dae7673aSJames Wright PetscCall(PetscLogStageGetId("Stats Process", &stage_stats_process));
432dae7673aSJames Wright if (stage_stats_process == -1) PetscCall(PetscLogStageRegister("Stats Process", &stage_stats_process));
433dae7673aSJames Wright PetscCall(PetscLogStagePush(stage_stats_process));
434dae7673aSJames Wright
435dae7673aSJames Wright PetscCall(VecZeroEntries(spanstats->Parent_Stats_loc));
436dae7673aSJames Wright
437dae7673aSJames Wright PetscCall(VecGetArrayRead(spanstats->Child_Stats_loc, &child_stats));
438dae7673aSJames Wright PetscCall(VecGetArray(spanstats->Parent_Stats_loc, &parent_stats));
439dae7673aSJames Wright
440dae7673aSJames Wright if (spanstats->num_comp_stats == 1) unit = MPIU_REAL;
441dae7673aSJames Wright else {
442dae7673aSJames Wright PetscCallMPI(MPI_Type_contiguous(spanstats->num_comp_stats, MPIU_REAL, &unit));
443dae7673aSJames Wright PetscCallMPI(MPI_Type_commit(&unit));
444dae7673aSJames Wright }
445dae7673aSJames Wright
446dae7673aSJames Wright PetscCall(PetscSFReduceBegin(spanstats->sf, unit, child_stats, parent_stats, MPI_SUM));
447dae7673aSJames Wright PetscCall(PetscSFReduceEnd(spanstats->sf, unit, child_stats, parent_stats, MPI_SUM));
448dae7673aSJames Wright
449dae7673aSJames Wright PetscCall(VecRestoreArrayRead(spanstats->Child_Stats_loc, &child_stats));
450dae7673aSJames Wright PetscCall(VecRestoreArray(spanstats->Parent_Stats_loc, &parent_stats));
451dae7673aSJames Wright PetscCallMPI(MPI_Type_free(&unit));
452dae7673aSJames Wright
453dae7673aSJames Wright PetscReal solution_time;
454dae7673aSJames Wright PetscCall(DMGetOutputSequenceNumber(spanstats->dm, NULL, &solution_time));
455dae7673aSJames Wright PetscReal summing_duration = solution_time - honee->app_ctx->cont_time;
456dae7673aSJames Wright PetscCall(VecScale(spanstats->Parent_Stats_loc, 1 / (summing_duration * spanstats->span_width)));
457dae7673aSJames Wright
458dae7673aSJames Wright // L^2 projection with the parent_data
459dae7673aSJames Wright PetscCall(DMGetGlobalVector(spanstats->dm, &RHS));
460dae7673aSJames Wright PetscCall(ApplyCeedOperatorLocalToGlobal(spanstats->Parent_Stats_loc, RHS, spanstats->op_proj_rhs_ctx));
461dae7673aSJames Wright
462dae7673aSJames Wright PetscCall(KSPSolve(spanstats->ksp, RHS, stats));
463dae7673aSJames Wright
464dae7673aSJames Wright PetscCall(DMRestoreGlobalVector(spanstats->dm, &RHS));
465dae7673aSJames Wright PetscCall(PetscLogStagePop());
466dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS);
467dae7673aSJames Wright }
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