1dae7673aSJames Wright // SPDX-FileCopyrightText: Copyright (c) 2017-2024, HONEE contributors. 2dae7673aSJames Wright // SPDX-License-Identifier: Apache-2.0 OR BSD-2-Clause 3dae7673aSJames Wright /// @file 4dae7673aSJames Wright /// Functions for setting up and performing spanwise-statistics collection 5dae7673aSJames Wright /// 6dae7673aSJames Wright /// "Parent" refers to the 2D plane on which statistics are collected *onto*. 7dae7673aSJames Wright /// "Child" refers to the 3D domain where statistics are gathered *from*. 8dae7673aSJames Wright /// Each quadrature point on the parent plane has several children in the child domain that it performs spanwise averaging with. 9dae7673aSJames Wright 10dae7673aSJames Wright #include <ceed.h> 11dae7673aSJames Wright #include <petscdmplex.h> 12dae7673aSJames Wright #include <petscsf.h> 13dae7673aSJames Wright #include <spanstats.h> 14dae7673aSJames Wright 15dae7673aSJames Wright #include <navierstokes.h> 16dae7673aSJames Wright #include <petsc_ops.h> 17dae7673aSJames Wright 185206a5a0SJames Wright PetscErrorCode SpanStatsCtxDestroy(SpanStatsCtx *spanstats) { 195206a5a0SJames Wright SpanStatsCtx spanstats_ = *spanstats; 20dae7673aSJames Wright 21dae7673aSJames Wright PetscFunctionBeginUser; 225206a5a0SJames Wright if (spanstats_ == NULL) PetscFunctionReturn(PETSC_SUCCESS); 235206a5a0SJames Wright PetscCall(VecDestroy(&spanstats_->Child_Stats_loc)); 245206a5a0SJames Wright PetscCall(VecDestroy(&spanstats_->Parent_Stats_loc)); 25dae7673aSJames Wright 265206a5a0SJames Wright PetscCall(OperatorApplyContextDestroy(spanstats_->op_stats_collect_ctx)); 275206a5a0SJames Wright PetscCall(OperatorApplyContextDestroy(spanstats_->op_proj_rhs_ctx)); 285206a5a0SJames Wright PetscCall(OperatorApplyContextDestroy(spanstats_->mms_error_ctx)); 29dae7673aSJames Wright 305206a5a0SJames Wright PetscCall(KSPDestroy(&spanstats_->ksp)); 315206a5a0SJames Wright PetscCall(PetscSFDestroy(&spanstats_->sf)); 325206a5a0SJames Wright PetscCall(DMDestroy(&spanstats_->dm)); 335206a5a0SJames Wright PetscCall(PetscFree(spanstats_->prefix)); 345206a5a0SJames Wright PetscCall(PetscFree(spanstats_)); 355206a5a0SJames Wright *spanstats = NULL; 36dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS); 37dae7673aSJames Wright } 38dae7673aSJames Wright 39dae7673aSJames Wright static PetscErrorCode SpanwiseStatisticssCreateDM(Honee honee, SpanStatsCtx spanstats, PetscInt degree, PetscInt num_comps) { 40dae7673aSJames Wright PetscReal domain_min[3], domain_max[3]; 41dae7673aSJames Wright PetscLogStage stage_stats_setup; 42dae7673aSJames Wright MPI_Comm comm = PetscObjectComm((PetscObject)honee->dm); 43dae7673aSJames Wright 44dae7673aSJames Wright PetscFunctionBeginUser; 45dae7673aSJames Wright PetscCall(PetscLogStageGetId("Stats Setup", &stage_stats_setup)); 46dae7673aSJames Wright if (stage_stats_setup == -1) PetscCall(PetscLogStageRegister("Stats Setup", &stage_stats_setup)); 47dae7673aSJames Wright PetscCall(PetscLogStagePush(stage_stats_setup)); 48dae7673aSJames Wright 49dae7673aSJames Wright spanstats->num_comp_stats = num_comps; 50dae7673aSJames Wright 51dae7673aSJames Wright // Get spanwise length 52dae7673aSJames Wright PetscCall(DMGetBoundingBox(honee->dm, domain_min, domain_max)); 53dae7673aSJames Wright spanstats->span_width = domain_max[2] - domain_min[2]; 54dae7673aSJames Wright 55dae7673aSJames Wright { // Get DM from surface 56dae7673aSJames Wright DM parent_distributed_dm; 57dae7673aSJames Wright const PetscSF *isoperiodicface; 58dae7673aSJames Wright PetscInt num_isoperiodicface; 59dae7673aSJames Wright DMLabel label; 60dae7673aSJames Wright PetscMPIInt size; 61dae7673aSJames Wright 62dae7673aSJames Wright PetscCall(DMPlexGetIsoperiodicFaceSF(honee->dm, &num_isoperiodicface, &isoperiodicface)); 63dae7673aSJames Wright 64dae7673aSJames Wright if (isoperiodicface) { 65dae7673aSJames Wright PetscSF inv_isoperiodicface; 66dae7673aSJames Wright PetscInt nleaves, isoperiodicface_index = -1; 67dae7673aSJames Wright const PetscInt *ilocal; 68dae7673aSJames Wright char isoperiodicface_key[1024]; 69dae7673aSJames Wright 70dae7673aSJames Wright PetscCall(PetscSNPrintf(isoperiodicface_key, sizeof isoperiodicface_key, "-%sisoperiodic_facesf", spanstats->prefix)); 71dae7673aSJames Wright PetscCall(PetscOptionsGetInt(NULL, NULL, isoperiodicface_key, &isoperiodicface_index, NULL)); 72dae7673aSJames Wright isoperiodicface_index = isoperiodicface_index == -1 ? num_isoperiodicface - 1 : isoperiodicface_index; 73dae7673aSJames Wright PetscCall(PetscSFCreateInverseSF(isoperiodicface[isoperiodicface_index], &inv_isoperiodicface)); 74dae7673aSJames Wright PetscCall(PetscSFGetGraph(inv_isoperiodicface, NULL, &nleaves, &ilocal, NULL)); 75dae7673aSJames Wright PetscCall(DMCreateLabel(honee->dm, "Periodic Face")); 76dae7673aSJames Wright PetscCall(DMGetLabel(honee->dm, "Periodic Face", &label)); 77dae7673aSJames Wright for (PetscInt i = 0; i < nleaves; i++) { 78dae7673aSJames Wright PetscCall(DMLabelSetValue(label, ilocal[i], 1)); 79dae7673aSJames Wright } 80dae7673aSJames Wright PetscCall(PetscSFDestroy(&inv_isoperiodicface)); 81dae7673aSJames Wright } else { 82dae7673aSJames Wright PetscCall(DMGetLabel(honee->dm, "Face Sets", &label)); 83dae7673aSJames Wright } 84dae7673aSJames Wright 85dae7673aSJames Wright PetscCall(DMPlexLabelComplete(honee->dm, label)); 86*240d24bdSJames Wright PetscCall(DMPlexFilter(honee->dm, label, 1, PETSC_FALSE, PETSC_FALSE, PetscObjectComm((PetscObject)honee->dm), NULL, &spanstats->dm)); 87dae7673aSJames Wright PetscCall(DMSetCoordinateDisc(spanstats->dm, NULL, PETSC_FALSE, PETSC_TRUE)); // Ensure that a coordinate FE exists 88dae7673aSJames Wright 89dae7673aSJames Wright PetscCall(DMPlexDistribute(spanstats->dm, 0, NULL, &parent_distributed_dm)); 90dae7673aSJames Wright PetscCallMPI(MPI_Comm_size(comm, &size)); 91dae7673aSJames Wright if (parent_distributed_dm) { 92dae7673aSJames Wright PetscCall(DMDestroy(&spanstats->dm)); 93dae7673aSJames Wright spanstats->dm = parent_distributed_dm; 94dae7673aSJames Wright } else if (size > 1) { 95dae7673aSJames Wright PetscCall(PetscPrintf(comm, "WARNING: Spanwise statistics: parent DM could not be distributed accross %d ranks.\n", size)); 96dae7673aSJames Wright } 97dae7673aSJames Wright } 98dae7673aSJames Wright { 99dae7673aSJames Wright PetscBool is_simplex = PETSC_FALSE; 100dae7673aSJames Wright PetscCall(DMPlexIsSimplex(spanstats->dm, &is_simplex)); 101dae7673aSJames Wright PetscCheck(is_simplex != PETSC_TRUE, comm, PETSC_ERR_ARG_WRONGSTATE, "Spanwise statistics is not implemented for non-tensor product grids"); 102dae7673aSJames Wright } 103dae7673aSJames Wright 104dae7673aSJames Wright PetscCall(PetscObjectSetName((PetscObject)spanstats->dm, "Spanwise_Stats")); 105dae7673aSJames Wright PetscCall(DMSetOptionsPrefix(spanstats->dm, spanstats->prefix)); 106dae7673aSJames Wright PetscCall(DMSetFromOptions(spanstats->dm)); 107dae7673aSJames Wright PetscCall(DMViewFromOptions(spanstats->dm, NULL, "-dm_view")); 108dae7673aSJames Wright 109dae7673aSJames Wright // Create FE space for parent DM 1109eadbee4SJames Wright PetscCall(DMSetupByOrder_FEM(PETSC_TRUE, PETSC_TRUE, honee->app_ctx->degree, 1, honee->app_ctx->q_extra, 1, &spanstats->num_comp_stats, 1119eadbee4SJames Wright spanstats->dm)); 112dae7673aSJames Wright 113dae7673aSJames Wright PetscCall(PetscLogStagePop()); 114dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS); 115dae7673aSJames Wright } 116dae7673aSJames Wright 117dae7673aSJames Wright /** @brief Create CeedElemRestriction for collocated data in component-major order. 118dae7673aSJames Wright a. Sets the strides of the restriction to component-major order 119dae7673aSJames Wright Number of quadrature points is used from the CeedBasis, and number of elements is used from the CeedElemRestriction. 120dae7673aSJames Wright */ 121dae7673aSJames Wright static PetscErrorCode CreateElemRestrColloc_CompMajor(Ceed ceed, CeedInt num_comp, CeedBasis basis, CeedElemRestriction elem_restr_base, 122dae7673aSJames Wright CeedElemRestriction *elem_restr_collocated) { 123dae7673aSJames Wright CeedInt num_elem_qpts, loc_num_elem; 124dae7673aSJames Wright 125dae7673aSJames Wright PetscFunctionBeginUser; 126dae7673aSJames Wright PetscCallCeed(ceed, CeedBasisGetNumQuadraturePoints(basis, &num_elem_qpts)); 127dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionGetNumElements(elem_restr_base, &loc_num_elem)); 128dae7673aSJames Wright 129dae7673aSJames Wright const CeedInt strides[] = {num_comp, 1, num_elem_qpts * num_comp}; 130dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionCreateStrided(ceed, loc_num_elem, num_elem_qpts, num_comp, num_comp * loc_num_elem * num_elem_qpts, strides, 131dae7673aSJames Wright elem_restr_collocated)); 132dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS); 133dae7673aSJames Wright } 134dae7673aSJames Wright 135dae7673aSJames Wright // Get coordinates of quadrature points 1364fe35dceSJames Wright static PetscErrorCode GetQuadratureCoords(Ceed ceed, DM dm, DMLabel domain_label, PetscInt label_value, PetscInt height, Vec *Qx_coords, 137dae7673aSJames Wright PetscInt *total_nqpnts) { 1384fe35dceSJames Wright CeedElemRestriction elem_restr_qx, elem_restr_x; 1394fe35dceSJames Wright CeedBasis basis_x; 1404fe35dceSJames Wright CeedVector x_coords; 141dae7673aSJames Wright CeedQFunction qf_quad_coords; 142dae7673aSJames Wright CeedOperator op_quad_coords; 143dae7673aSJames Wright CeedInt num_comp_x; 144dae7673aSJames Wright CeedSize l_vec_size; 145dae7673aSJames Wright OperatorApplyContext op_quad_coords_ctx; 146dae7673aSJames Wright 147dae7673aSJames Wright PetscFunctionBeginUser; 1484fe35dceSJames Wright PetscCall(DMPlexCeedCoordinateCreateField(ceed, dm, domain_label, label_value, height, &elem_restr_x, &basis_x, &x_coords)); 149dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionGetNumComponents(elem_restr_x, &num_comp_x)); 150dae7673aSJames Wright PetscCall(CreateElemRestrColloc_CompMajor(ceed, num_comp_x, basis_x, elem_restr_x, &elem_restr_qx)); 151dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionGetLVectorSize(elem_restr_qx, &l_vec_size)); 152dae7673aSJames Wright *total_nqpnts = l_vec_size / num_comp_x; 153dae7673aSJames Wright 154dae7673aSJames Wright // Create QFunction 155dae7673aSJames Wright PetscCallCeed(ceed, CeedQFunctionCreateIdentity(ceed, num_comp_x, CEED_EVAL_INTERP, CEED_EVAL_NONE, &qf_quad_coords)); 156dae7673aSJames Wright 157dae7673aSJames Wright // Create Operator 158dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_quad_coords, NULL, NULL, &op_quad_coords)); 159dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorSetField(op_quad_coords, "input", elem_restr_x, basis_x, x_coords)); 160dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorSetField(op_quad_coords, "output", elem_restr_qx, CEED_BASIS_NONE, CEED_VECTOR_ACTIVE)); 161dae7673aSJames Wright 162dae7673aSJames Wright PetscCall(CeedOperatorCreateLocalVecs(op_quad_coords, DMReturnVecType(dm), PETSC_COMM_SELF, NULL, Qx_coords)); 163dae7673aSJames Wright PetscCall(OperatorApplyContextCreate(NULL, NULL, ceed, op_quad_coords, CEED_VECTOR_NONE, NULL, NULL, NULL, &op_quad_coords_ctx)); 164dae7673aSJames Wright 165dae7673aSJames Wright PetscCall(ApplyCeedOperatorLocalToLocal(NULL, *Qx_coords, op_quad_coords_ctx)); 166dae7673aSJames Wright 167dae7673aSJames Wright PetscCall(OperatorApplyContextDestroy(op_quad_coords_ctx)); 168dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&elem_restr_qx)); 1694fe35dceSJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&elem_restr_x)); 1704fe35dceSJames Wright PetscCallCeed(ceed, CeedBasisDestroy(&basis_x)); 1714fe35dceSJames Wright PetscCallCeed(ceed, CeedVectorDestroy(&x_coords)); 172dae7673aSJames Wright PetscCallCeed(ceed, CeedQFunctionDestroy(&qf_quad_coords)); 173dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorDestroy(&op_quad_coords)); 174dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS); 175dae7673aSJames Wright } 176dae7673aSJames Wright 177dae7673aSJames Wright static PetscErrorCode SpanwiseStatisticsSetupDataCreate(Honee honee, SpanStatsCtx spanstats, SpanStatsSetupData *stats_setup_data) { 178dae7673aSJames Wright Ceed ceed = honee->ceed; 179dae7673aSJames Wright DM dm = spanstats->dm; 180dae7673aSJames Wright Vec X_loc; 181dae7673aSJames Wright CeedInt num_comp_x, num_comp_stats = spanstats->num_comp_stats; 182e3db12f8SJames Wright PetscInt height = 0, dm_field = 0; 183cf8f12c8SJames Wright CeedElemRestriction elem_restr_q; 184cf8f12c8SJames Wright CeedBasis basis_q; 185dae7673aSJames Wright 186dae7673aSJames Wright PetscFunctionBeginUser; 187dae7673aSJames Wright PetscCall(PetscNew(stats_setup_data)); 188dae7673aSJames Wright 189e3db12f8SJames Wright PetscCall(DMPlexCeedElemRestrictionCreate(ceed, dm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, height, dm_field, 190e3db12f8SJames Wright &(*stats_setup_data)->elem_restr_parent_stats)); 191e3db12f8SJames Wright PetscCall(DMPlexCeedElemRestrictionCoordinateCreate(ceed, dm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, height, 192e3db12f8SJames Wright &(*stats_setup_data)->elem_restr_parent_x)); 193dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionGetNumComponents((*stats_setup_data)->elem_restr_parent_x, &num_comp_x)); 194dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionCreateVector((*stats_setup_data)->elem_restr_parent_x, &(*stats_setup_data)->x_coord, NULL)); 195e3db12f8SJames Wright PetscCall(DMPlexCeedBasisCoordinateCreate(ceed, dm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, height, &(*stats_setup_data)->basis_x)); 196e3db12f8SJames Wright PetscCall(DMPlexCeedBasisCreate(ceed, dm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, height, dm_field, &(*stats_setup_data)->basis_stats)); 197dae7673aSJames Wright 198dae7673aSJames Wright PetscCall(CreateElemRestrColloc_CompMajor(ceed, num_comp_stats, (*stats_setup_data)->basis_stats, (*stats_setup_data)->elem_restr_parent_stats, 199dae7673aSJames Wright &(*stats_setup_data)->elem_restr_parent_colloc)); 200cf8f12c8SJames Wright PetscCall(DMPlexCeedElemRestrictionCreate(ceed, honee->dm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, 0, 0, &elem_restr_q)); 201cf8f12c8SJames Wright PetscCall(DMPlexCeedBasisCreate(ceed, honee->dm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, 0, 0, &basis_q)); 202cf8f12c8SJames Wright PetscCall(CreateElemRestrColloc_CompMajor(ceed, num_comp_stats, basis_q, elem_restr_q, &(*stats_setup_data)->elem_restr_child_colloc)); 203cf8f12c8SJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&elem_restr_q)); 204cf8f12c8SJames Wright PetscCallCeed(ceed, CeedBasisDestroy(&basis_q)); 205dae7673aSJames Wright 206dae7673aSJames Wright { // -- Copy DM coordinates into CeedVector 207dae7673aSJames Wright DM cdm; 208dae7673aSJames Wright PetscCall(DMGetCellCoordinateDM(dm, &cdm)); 209dae7673aSJames Wright if (cdm) { 210dae7673aSJames Wright PetscCall(DMGetCellCoordinatesLocal(dm, &X_loc)); 211dae7673aSJames Wright } else { 212dae7673aSJames Wright PetscCall(DMGetCoordinatesLocal(dm, &X_loc)); 213dae7673aSJames Wright } 214dae7673aSJames Wright } 215755bbe25SJames Wright // Do not need to scale the coordinates. The DMClone operation has already copied the scaled coordinates 216dae7673aSJames Wright PetscCall(VecCopyPetscToCeed(X_loc, (*stats_setup_data)->x_coord)); 217dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS); 218dae7673aSJames Wright } 219dae7673aSJames Wright 220dae7673aSJames Wright static PetscErrorCode SpanwiseStatisticsSetupDataDestroy(SpanStatsSetupData data) { 221dae7673aSJames Wright Ceed ceed; 222dae7673aSJames Wright 223dae7673aSJames Wright PetscFunctionBeginUser; 224dae7673aSJames Wright PetscCall(CeedElemRestrictionGetCeed(data->elem_restr_parent_x, &ceed)); 225dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&data->elem_restr_parent_x)); 226dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&data->elem_restr_parent_stats)); 227dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&data->elem_restr_parent_colloc)); 228dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&data->elem_restr_child_colloc)); 229dae7673aSJames Wright PetscCallCeed(ceed, CeedBasisDestroy(&data->basis_x)); 230dae7673aSJames Wright PetscCallCeed(ceed, CeedBasisDestroy(&data->basis_stats)); 231dae7673aSJames Wright PetscCallCeed(ceed, CeedVectorDestroy(&data->x_coord)); 232dae7673aSJames Wright PetscCall(PetscFree(data)); 233dae7673aSJames Wright PetscCheck(CeedDestroy(&ceed) == CEED_ERROR_SUCCESS, PETSC_COMM_SELF, PETSC_ERR_LIB, "Destroying Ceed object failed"); 234dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS); 235dae7673aSJames Wright } 236dae7673aSJames Wright 237dae7673aSJames Wright // Create PetscSF for child-to-parent communication 238b4598da8SJames Wright static PetscErrorCode SpanwiseStatisticsCreateSF(Honee honee, SpanStatsCtx spanstats, SpanStatsSetupData stats_setup_data, DM parentdm, DM childdm, 239b4598da8SJames Wright PetscSF *statssf) { 240dae7673aSJames Wright Ceed ceed = honee->ceed; 2414fe35dceSJames Wright PetscInt child_num_qpnts, parent_num_qpnts, num_comp_x; 242dae7673aSJames Wright Vec Child_qx_coords, Parent_qx_coords; 243dae7673aSJames Wright 244dae7673aSJames Wright PetscFunctionBeginUser; 245dae7673aSJames Wright PetscCall(PetscSFCreate(PetscObjectComm((PetscObject)childdm), statssf)); 246dae7673aSJames Wright 247dae7673aSJames Wright // Assume that child and parent have the same number of components 2484fe35dceSJames Wright PetscCall(DMGetCoordinateNumComps(childdm, &num_comp_x)); 249dae7673aSJames Wright const PetscInt num_comp_sf = num_comp_x - 1; // Number of coord components used in the creation of the SF 250dae7673aSJames Wright 251dae7673aSJames Wright // Get quad_coords for child and parent DM 2524fe35dceSJames Wright PetscCall(GetQuadratureCoords(ceed, childdm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, 0, &Child_qx_coords, &child_num_qpnts)); 2534fe35dceSJames Wright PetscCall(GetQuadratureCoords(ceed, parentdm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, 0, &Parent_qx_coords, &parent_num_qpnts)); 254dae7673aSJames Wright 255dae7673aSJames Wright { // Remove z component of coordinates for matching 256dae7673aSJames Wright const PetscReal *child_quad_coords, *parent_quad_coords; 257dae7673aSJames Wright PetscReal *child_coords, *parent_coords; 258dae7673aSJames Wright 259dae7673aSJames Wright PetscCall(VecGetArrayRead(Child_qx_coords, &child_quad_coords)); 260dae7673aSJames Wright PetscCall(VecGetArrayRead(Parent_qx_coords, &parent_quad_coords)); 261dae7673aSJames Wright 262dae7673aSJames Wright PetscCall(PetscMalloc2(child_num_qpnts * 2, &child_coords, parent_num_qpnts * 2, &parent_coords)); 263dae7673aSJames Wright for (int i = 0; i < child_num_qpnts; i++) { 264dae7673aSJames Wright child_coords[0 + i * num_comp_sf] = child_quad_coords[0 + i * num_comp_x]; 265dae7673aSJames Wright child_coords[1 + i * num_comp_sf] = child_quad_coords[1 + i * num_comp_x]; 266dae7673aSJames Wright } 267dae7673aSJames Wright for (int i = 0; i < parent_num_qpnts; i++) { 268dae7673aSJames Wright parent_coords[0 + i * num_comp_sf] = parent_quad_coords[0 + i * num_comp_x]; 269dae7673aSJames Wright parent_coords[1 + i * num_comp_sf] = parent_quad_coords[1 + i * num_comp_x]; 270dae7673aSJames Wright } 271dae7673aSJames Wright PetscCall(VecRestoreArrayRead(Child_qx_coords, &child_quad_coords)); 272dae7673aSJames Wright PetscCall(VecRestoreArrayRead(Parent_qx_coords, &parent_quad_coords)); 273dae7673aSJames Wright 274dae7673aSJames Wright PetscCall(PetscSFSetGraphFromCoordinates(*statssf, parent_num_qpnts, child_num_qpnts, num_comp_sf, 1e-12, parent_coords, child_coords)); 275dae7673aSJames Wright PetscCall(PetscFree2(child_coords, parent_coords)); 276dae7673aSJames Wright } 277dae7673aSJames Wright 278b4598da8SJames Wright { 279b4598da8SJames Wright char spanstats_sf_key[1024]; 280b4598da8SJames Wright PetscCall(PetscSNPrintf(spanstats_sf_key, sizeof spanstats_sf_key, "-%ssf_view", spanstats->prefix)); 281b4598da8SJames Wright PetscCall(PetscObjectSetName((PetscObject)*statssf, spanstats->prefix)); 282b4598da8SJames Wright PetscCall(PetscSFViewFromOptions(*statssf, NULL, spanstats_sf_key)); 283b4598da8SJames Wright } 284dae7673aSJames Wright 285dae7673aSJames Wright PetscCall(VecDestroy(&Child_qx_coords)); 286dae7673aSJames Wright PetscCall(VecDestroy(&Parent_qx_coords)); 287dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS); 288dae7673aSJames Wright } 289dae7673aSJames Wright 290dae7673aSJames Wright // @brief Setup RHS and LHS for L^2 projection of statistics 291dae7673aSJames Wright static PetscErrorCode SpanwiseStatisticsSetupL2Projection(Honee honee, SpanStatsCtx spanstats, SpanStatsSetupData stats_setup_data) { 292dae7673aSJames Wright Ceed ceed = honee->ceed; 293dae7673aSJames Wright CeedOperator op_mass, op_proj_rhs; 294dae7673aSJames Wright CeedQFunction qf_mass, qf_stats_proj; 295dae7673aSJames Wright CeedInt q_data_size, num_comp_stats = spanstats->num_comp_stats; 296dae7673aSJames Wright CeedElemRestriction elem_restr_qd; 297dae7673aSJames Wright CeedVector q_data; 298dae7673aSJames Wright 299dae7673aSJames Wright PetscFunctionBeginUser; 300dae7673aSJames Wright // -- Create Operator for RHS of L^2 projection of statistics 301dae7673aSJames Wright // Simply take collocated parent data (with quadrature weight already applied) and multiply by weight function. 302dae7673aSJames Wright // Therefore, an Identity QF is sufficient 303dae7673aSJames Wright PetscCallCeed(ceed, CeedQFunctionCreateIdentity(ceed, num_comp_stats, CEED_EVAL_NONE, CEED_EVAL_INTERP, &qf_stats_proj)); 304dae7673aSJames Wright 305dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_stats_proj, NULL, NULL, &op_proj_rhs)); 306dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorSetField(op_proj_rhs, "input", stats_setup_data->elem_restr_parent_colloc, CEED_BASIS_NONE, CEED_VECTOR_ACTIVE)); 307dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorSetField(op_proj_rhs, "output", stats_setup_data->elem_restr_parent_stats, stats_setup_data->basis_stats, 308dae7673aSJames Wright CEED_VECTOR_ACTIVE)); 309dae7673aSJames Wright 310dae7673aSJames Wright PetscCall(OperatorApplyContextCreate(NULL, spanstats->dm, ceed, op_proj_rhs, NULL, NULL, NULL, NULL, &spanstats->op_proj_rhs_ctx)); 311dae7673aSJames Wright PetscCall(CeedOperatorCreateLocalVecs(op_proj_rhs, DMReturnVecType(spanstats->dm), PETSC_COMM_SELF, &spanstats->Parent_Stats_loc, NULL)); 3129018c49aSJames Wright PetscCall(QDataGet(ceed, spanstats->dm, DMLABEL_DEFAULT, DMLABEL_DEFAULT_VALUE, &elem_restr_qd, &q_data, &q_data_size)); 313dae7673aSJames Wright 314dae7673aSJames Wright // Create Mass CeedOperator 315dae7673aSJames Wright PetscCall(HoneeMassQFunctionCreate(ceed, num_comp_stats, q_data_size, &qf_mass)); 316dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_mass, NULL, NULL, &op_mass)); 317dae7673aSJames Wright PetscCallCeed(ceed, 318dae7673aSJames Wright CeedOperatorSetField(op_mass, "u", stats_setup_data->elem_restr_parent_stats, stats_setup_data->basis_stats, CEED_VECTOR_ACTIVE)); 319dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorSetField(op_mass, "qdata", elem_restr_qd, CEED_BASIS_NONE, q_data)); 320dae7673aSJames Wright PetscCallCeed(ceed, 321dae7673aSJames Wright CeedOperatorSetField(op_mass, "v", stats_setup_data->elem_restr_parent_stats, stats_setup_data->basis_stats, CEED_VECTOR_ACTIVE)); 322dae7673aSJames Wright 323dae7673aSJames Wright { // Setup KSP for L^2 projection 324dae7673aSJames Wright Mat mat_mass; 325dae7673aSJames Wright KSP ksp; 326dae7673aSJames Wright 327dae7673aSJames Wright PetscCall(MatCreateCeed(spanstats->dm, spanstats->dm, op_mass, NULL, &mat_mass)); 328dae7673aSJames Wright 329dae7673aSJames Wright PetscCall(KSPCreate(PetscObjectComm((PetscObject)spanstats->dm), &ksp)); 330dae7673aSJames Wright PetscCall(KSPSetOptionsPrefix(ksp, spanstats->prefix)); 331dae7673aSJames Wright { 332dae7673aSJames Wright PC pc; 333dae7673aSJames Wright PetscCall(KSPGetPC(ksp, &pc)); 334dae7673aSJames Wright PetscCall(PCSetType(pc, PCJACOBI)); 335dae7673aSJames Wright PetscCall(PCJacobiSetType(pc, PC_JACOBI_DIAGONAL)); 336dae7673aSJames Wright PetscCall(KSPSetType(ksp, KSPCG)); 337dae7673aSJames Wright PetscCall(KSPSetNormType(ksp, KSP_NORM_NATURAL)); 338dae7673aSJames Wright PetscCall(KSPSetTolerances(ksp, 1e-10, PETSC_DEFAULT, PETSC_DEFAULT, PETSC_DEFAULT)); 339dae7673aSJames Wright } 340dae7673aSJames Wright PetscCall(KSPSetFromOptions_WithMatCeed(ksp, mat_mass)); 341dae7673aSJames Wright spanstats->ksp = ksp; 342dae7673aSJames Wright PetscCall(MatDestroy(&mat_mass)); 343dae7673aSJames Wright } 344dae7673aSJames Wright 345dae7673aSJames Wright PetscCallCeed(ceed, CeedElemRestrictionDestroy(&elem_restr_qd)); 346dae7673aSJames Wright PetscCallCeed(ceed, CeedVectorDestroy(&q_data)); 347dae7673aSJames Wright PetscCallCeed(ceed, CeedQFunctionDestroy(&qf_mass)); 348dae7673aSJames Wright PetscCallCeed(ceed, CeedQFunctionDestroy(&qf_stats_proj)); 349dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorDestroy(&op_mass)); 350dae7673aSJames Wright PetscCallCeed(ceed, CeedOperatorDestroy(&op_proj_rhs)); 351dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS); 352dae7673aSJames Wright } 353dae7673aSJames Wright 354dae7673aSJames Wright PetscErrorCode SpanwiseStatisticsSetupInitialize(Honee honee, PetscInt degree, PetscInt num_comps, const char *prefix, 35558d1351fSJames Wright SpanStatsSetupData *stats_setup_data, SpanStatsCtx *spanstats) { 356dae7673aSJames Wright PetscLogStage stage_stats_setup; 35758d1351fSJames Wright SpanStatsCtx spanstats_; 358dae7673aSJames Wright 359dae7673aSJames Wright PetscFunctionBeginUser; 360dae7673aSJames Wright PetscCall(PetscLogStageGetId("Stats Setup", &stage_stats_setup)); 361dae7673aSJames Wright if (stage_stats_setup == -1) PetscCall(PetscLogStageRegister("Stats Setup", &stage_stats_setup)); 362dae7673aSJames Wright PetscCall(PetscLogStagePush(stage_stats_setup)); 363dae7673aSJames Wright 36458d1351fSJames Wright PetscCall(PetscNew(&spanstats_)); 36558d1351fSJames Wright PetscCall(PetscStrallocpy(prefix, &spanstats_->prefix)); 366dae7673aSJames Wright 36758d1351fSJames Wright spanstats_->collect_interval = 1; 36858d1351fSJames Wright PetscCall(PetscOptionsGetInt(NULL, prefix, "-collect_interval", &spanstats_->collect_interval, NULL)); 369dae7673aSJames Wright 370dae7673aSJames Wright // Create parent DM 37158d1351fSJames Wright PetscCall(SpanwiseStatisticssCreateDM(honee, spanstats_, degree, num_comps)); 372dae7673aSJames Wright 373dae7673aSJames Wright // Create necessary CeedObjects for setting up statistics 37458d1351fSJames Wright PetscCall(SpanwiseStatisticsSetupDataCreate(honee, spanstats_, stats_setup_data)); 375dae7673aSJames Wright // 376dae7673aSJames Wright // Create SF for communicating child data back their respective parents 3774fe35dceSJames Wright PetscCall(SpanwiseStatisticsCreateSF(honee, spanstats_, *stats_setup_data, spanstats_->dm, honee->dm, &spanstats_->sf)); 378dae7673aSJames Wright 37958d1351fSJames Wright *spanstats = spanstats_; 380dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS); 381dae7673aSJames Wright } 382dae7673aSJames Wright 383dae7673aSJames Wright PetscErrorCode SpanwiseStatisticsSetupFinalize(TS ts, Honee honee, SpanStatsCtx spanstats, PetscViewerAndFormat *ctx, 384dae7673aSJames Wright SpanStatsSetupData *stats_setup_data) { 385dae7673aSJames Wright PetscFunctionBeginUser; 386dae7673aSJames Wright // Setup KSP and Mat for L^2 projection of statistics 387dae7673aSJames Wright PetscCall(SpanwiseStatisticsSetupL2Projection(honee, spanstats, *stats_setup_data)); 388dae7673aSJames Wright 389dae7673aSJames Wright PetscCall(PetscViewerSetOptionsPrefix(ctx->viewer, spanstats->prefix)); 390dae7673aSJames Wright PetscCall(PetscViewerSetFromOptions(ctx->viewer)); 391dae7673aSJames Wright 392dae7673aSJames Wright PetscCall(TSGetTime(ts, &spanstats->initial_solution_time)); 393dae7673aSJames Wright PetscCall(TSGetStepNumber(ts, &spanstats->initial_solution_step)); 394dae7673aSJames Wright CeedScalar initial_solution_time = spanstats->initial_solution_time; // done for type conversion 395dae7673aSJames Wright PetscCallCeed(honee->ceed, 396dae7673aSJames Wright CeedOperatorSetContextDouble(spanstats->op_stats_collect_ctx->op, spanstats->previous_time_label, &initial_solution_time)); 397dae7673aSJames Wright 398dae7673aSJames Wright PetscCall(SpanwiseStatisticsSetupDataDestroy(*stats_setup_data)); 399dae7673aSJames Wright PetscCall(PetscLogStagePop()); 400dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS); 401dae7673aSJames Wright } 402dae7673aSJames Wright 403dae7673aSJames Wright // Collect statistics based on the solution Q 404dae7673aSJames Wright PetscErrorCode SpanwiseStatisticsCollect(Honee honee, SpanStatsCtx spanstats, PetscScalar solution_time, Vec Q) { 405dae7673aSJames Wright PetscFunctionBeginUser; 406dae7673aSJames Wright PetscLogStage stage_stats_collect; 407dae7673aSJames Wright PetscCall(PetscLogStageGetId("Stats Collect", &stage_stats_collect)); 408dae7673aSJames Wright if (stage_stats_collect == -1) PetscCall(PetscLogStageRegister("Stats Collect", &stage_stats_collect)); 409dae7673aSJames Wright PetscCall(PetscLogStagePush(stage_stats_collect)); 410dae7673aSJames Wright 411dae7673aSJames Wright PetscCall(UpdateBoundaryValues(honee, honee->Q_loc, solution_time)); 412dae7673aSJames Wright PetscCallCeed(honee->ceed, CeedOperatorSetContextDouble(spanstats->op_stats_collect_ctx->op, spanstats->solution_time_label, &solution_time)); 413dae7673aSJames Wright PetscCall(DMGlobalToLocal(honee->dm, Q, INSERT_VALUES, honee->Q_loc)); 414dae7673aSJames Wright PetscCall(ApplyAddCeedOperatorLocalToLocal(honee->Q_loc, spanstats->Child_Stats_loc, spanstats->op_stats_collect_ctx)); 415dae7673aSJames Wright 416dae7673aSJames Wright PetscCallCeed(honee->ceed, CeedOperatorSetContextDouble(spanstats->op_stats_collect_ctx->op, spanstats->previous_time_label, &solution_time)); 417dae7673aSJames Wright 418dae7673aSJames Wright PetscCall(PetscLogStagePop()); 419dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS); 420dae7673aSJames Wright } 421dae7673aSJames Wright 422dae7673aSJames Wright // Process the child statistics into parent statistics and project them onto stats 423dae7673aSJames Wright PetscErrorCode SpanwiseStatisticsProcess(Honee honee, SpanStatsCtx spanstats, Vec stats) { 424dae7673aSJames Wright const PetscScalar *child_stats; 425dae7673aSJames Wright PetscScalar *parent_stats; 426dae7673aSJames Wright MPI_Datatype unit; 427dae7673aSJames Wright Vec RHS; 428dae7673aSJames Wright 429dae7673aSJames Wright PetscFunctionBeginUser; 430dae7673aSJames Wright PetscLogStage stage_stats_process; 431dae7673aSJames Wright PetscCall(PetscLogStageGetId("Stats Process", &stage_stats_process)); 432dae7673aSJames Wright if (stage_stats_process == -1) PetscCall(PetscLogStageRegister("Stats Process", &stage_stats_process)); 433dae7673aSJames Wright PetscCall(PetscLogStagePush(stage_stats_process)); 434dae7673aSJames Wright 435dae7673aSJames Wright PetscCall(VecZeroEntries(spanstats->Parent_Stats_loc)); 436dae7673aSJames Wright 437dae7673aSJames Wright PetscCall(VecGetArrayRead(spanstats->Child_Stats_loc, &child_stats)); 438dae7673aSJames Wright PetscCall(VecGetArray(spanstats->Parent_Stats_loc, &parent_stats)); 439dae7673aSJames Wright 440dae7673aSJames Wright if (spanstats->num_comp_stats == 1) unit = MPIU_REAL; 441dae7673aSJames Wright else { 442dae7673aSJames Wright PetscCallMPI(MPI_Type_contiguous(spanstats->num_comp_stats, MPIU_REAL, &unit)); 443dae7673aSJames Wright PetscCallMPI(MPI_Type_commit(&unit)); 444dae7673aSJames Wright } 445dae7673aSJames Wright 446dae7673aSJames Wright PetscCall(PetscSFReduceBegin(spanstats->sf, unit, child_stats, parent_stats, MPI_SUM)); 447dae7673aSJames Wright PetscCall(PetscSFReduceEnd(spanstats->sf, unit, child_stats, parent_stats, MPI_SUM)); 448dae7673aSJames Wright 449dae7673aSJames Wright PetscCall(VecRestoreArrayRead(spanstats->Child_Stats_loc, &child_stats)); 450dae7673aSJames Wright PetscCall(VecRestoreArray(spanstats->Parent_Stats_loc, &parent_stats)); 451dae7673aSJames Wright PetscCallMPI(MPI_Type_free(&unit)); 452dae7673aSJames Wright 453dae7673aSJames Wright PetscReal solution_time; 454dae7673aSJames Wright PetscCall(DMGetOutputSequenceNumber(spanstats->dm, NULL, &solution_time)); 455dae7673aSJames Wright PetscReal summing_duration = solution_time - honee->app_ctx->cont_time; 456dae7673aSJames Wright PetscCall(VecScale(spanstats->Parent_Stats_loc, 1 / (summing_duration * spanstats->span_width))); 457dae7673aSJames Wright 458dae7673aSJames Wright // L^2 projection with the parent_data 459dae7673aSJames Wright PetscCall(DMGetGlobalVector(spanstats->dm, &RHS)); 460dae7673aSJames Wright PetscCall(ApplyCeedOperatorLocalToGlobal(spanstats->Parent_Stats_loc, RHS, spanstats->op_proj_rhs_ctx)); 461dae7673aSJames Wright 462dae7673aSJames Wright PetscCall(KSPSolve(spanstats->ksp, RHS, stats)); 463dae7673aSJames Wright 464dae7673aSJames Wright PetscCall(DMRestoreGlobalVector(spanstats->dm, &RHS)); 465dae7673aSJames Wright PetscCall(PetscLogStagePop()); 466dae7673aSJames Wright PetscFunctionReturn(PETSC_SUCCESS); 467dae7673aSJames Wright } 468