xref: /libCEED/benchmarks/postprocess_plot.py (revision 5cd6c1fb67d52eb6a42b887bb79c183682dd86ca)
1d13e9b48SJed Brown#!/usr/bin/env python3
2*5cd6c1fbSSebastian Grimberg
3d13e9b48SJed Brown# Copyright (c) 2017-2018, Lawrence Livermore National Security, LLC.
4d13e9b48SJed Brown# Produced at the Lawrence Livermore National Laboratory. LLNL-CODE-734707.
5d13e9b48SJed Brown# All Rights reserved. See files LICENSE and NOTICE for details.
6d13e9b48SJed Brown#
7d13e9b48SJed Brown# This file is part of CEED, a collection of benchmarks, miniapps, software
8d13e9b48SJed Brown# libraries and APIs for efficient high-order finite element and spectral
9d13e9b48SJed Brown# element discretizations for exascale applications. For more information and
103d8e8822SJeremy L Thompson# source code availability see http://github.com/ceed
11d13e9b48SJed Brown#
12d13e9b48SJed Brown# The CEED research is supported by the Exascale Computing Project 17-SC-20-SC,
13d13e9b48SJed Brown# a collaborative effort of two U.S. Department of Energy organizations (Office
14d13e9b48SJed Brown# of Science and the National Nuclear Security Administration) responsible for
15d13e9b48SJed Brown# the planning and preparation of a capable exascale ecosystem, including
16d13e9b48SJed Brown# software, applications, hardware, advanced system engineering and early
17d13e9b48SJed Brown# testbed platforms, in support of the nation's exascale computing imperative.
18d13e9b48SJed Brown
19dec49e00SJed Brownfrom pylab import *
20dec49e00SJed Brownfrom matplotlib import use
21dec49e00SJed Brownfrom postprocess_base import read_logs
22dec49e00SJed Brownimport pandas as pd
23*5cd6c1fbSSebastian Grimberg
24*5cd6c1fbSSebastian Grimberg# Adjustable plot parameters
25d13e9b48SJed Brownlog_y = 0               # use log scale on the y-axis?
26d13e9b48SJed Brownx_range = (1e1, 4e6)     # plot range for the x-axis; comment out for auto
27d13e9b48SJed Browny_range = (0, 2e9)       # plot range for the y-axis; comment out for auto
28d13e9b48SJed Browndraw_iter_lines = 0     # draw the "iter/s" lines?
29d13e9b48SJed Brownymin_iter_lines = 3e5   # minimal y value for the "iter/s" lines
30d13e9b48SJed Brownymax_iter_lines = 8e8   # maximal y value for the "iter/s" lines
31d13e9b48SJed Brownlegend_ncol = (2 if log_y else 1)   # number of columns in the legend
32d13e9b48SJed Brownwrite_figures = 1       # save the figures to files?
33d13e9b48SJed Brownshow_figures = 1        # display the figures on the screen?
34d13e9b48SJed Brown
35dec49e00SJed Brown# Load the data
36d13e9b48SJed Brownruns = read_logs()
37d13e9b48SJed Brown
38dec49e00SJed Brown# Sample plot output
39d13e9b48SJed Brownif not show_figures:
40d13e9b48SJed Brown    use('pdf')
41d13e9b48SJed Brown
42d13e9b48SJed BrownrcParams['font.sans-serif'].insert(0, 'Noto Sans')
43d13e9b48SJed BrownrcParams['font.sans-serif'].insert(1, 'Open Sans')
44d13e9b48SJed BrownrcParams['figure.figsize'] = [10, 8]  # default: 8 x 6
45d13e9b48SJed Brown
46d13e9b48SJed Browncm_size = 16
47d13e9b48SJed Browncolors = ['dimgrey', 'black', 'saddlebrown', 'firebrick', 'red', 'orange',
48d13e9b48SJed Brown          'gold', 'lightgreen', 'green', 'cyan', 'teal', 'blue', 'navy',
49d13e9b48SJed Brown          'purple', 'magenta', 'pink']
50d13e9b48SJed Brown
51dec49e00SJed Brown# Get test names
52d13e9b48SJed Brownsel_runs = runs
53d13e9b48SJed Browntests = list(sel_runs.test.unique())
54d13e9b48SJed Browntest = tests[0]
55d13e9b48SJed Brown
56dec49e00SJed Brown# Run information
57d13e9b48SJed Brownprint('Using test:', test)
58d13e9b48SJed Brown
59d13e9b48SJed Brownif 'CEED Benchmark Problem' in test:
60d13e9b48SJed Brown    test_short = test.strip().split()[0] + ' BP' + test.strip().split()[-1]
61d13e9b48SJed Brown
62dec49e00SJed Brown# Plot same BP
63d13e9b48SJed Brownsel_runs = sel_runs.loc[sel_runs['test'] == test]
64d13e9b48SJed Brown
65dec49e00SJed Brown# Plot same case (scalar vs vector)
66d13e9b48SJed Browncases = list(sel_runs.case.unique())
67d13e9b48SJed Browncase = cases[0]
68d13e9b48SJed Brownvdim = 1 if case == 'scalar' else 3
69d13e9b48SJed Brownprint('Using case:', case)
70d13e9b48SJed Brownsel_runs = sel_runs.loc[sel_runs['case'] == case]
71d13e9b48SJed Brown
72dec49e00SJed Brown# Plot same 'code'
73d13e9b48SJed Browncodes = list(sel_runs.code.unique())
74d13e9b48SJed Browncode = codes[0]
75d13e9b48SJed Brownsel_runs = sel_runs.loc[sel_runs['code'] == code]
76d13e9b48SJed Brown
77dec49e00SJed Brown# Group plots by backend and number of processes
78981e58aeSvaleriabarrapl_set = sel_runs[['backend',
79981e58aeSvaleriabarra                   'backend_memtype',
80981e58aeSvaleriabarra                   'num_procs',
81981e58aeSvaleriabarra                   'num_procs_node']]
82d13e9b48SJed Brownpl_set = pl_set.drop_duplicates()
83d13e9b48SJed Brown
84dec49e00SJed Brown# Plotting
85d13e9b48SJed Brownfor index, row in pl_set.iterrows():
86d13e9b48SJed Brown    backend = row['backend']
87d13e9b48SJed Brown    backend_memtype = row['backend_memtype']
88d13e9b48SJed Brown    num_procs = float(row['num_procs'])
89d13e9b48SJed Brown    num_procs_node = float(row['num_procs_node'])
90d13e9b48SJed Brown    num_nodes = num_procs / num_procs_node
91d13e9b48SJed Brown    pl_runs = sel_runs[(sel_runs.backend == backend) |
92d13e9b48SJed Brown                       (sel_runs.num_procs == num_procs) |
93d13e9b48SJed Brown                       (sel_runs.num_procs_node == num_procs_node)]
94d13e9b48SJed Brown    if len(pl_runs.index) == 0:
95d13e9b48SJed Brown        continue
96d13e9b48SJed Brown
97d13e9b48SJed Brown    print('backend: %s, compute nodes: %i, number of MPI tasks = %i' % (
98d13e9b48SJed Brown        backend, num_nodes, num_procs))
99d13e9b48SJed Brown
100d13e9b48SJed Brown    figure()
101d13e9b48SJed Brown    i = 0
102d13e9b48SJed Brown    sol_p_set = sel_runs['degree'].drop_duplicates()
103d13e9b48SJed Brown    sol_p_set = sol_p_set.sort_values()
104dec49e00SJed Brown    # Iterate over P
105d13e9b48SJed Brown    for sol_p in sol_p_set:
106d13e9b48SJed Brown        qpts = sel_runs['quadrature_pts'].loc[pl_runs['degree'] == sol_p]
107d13e9b48SJed Brown        qpts = qpts.drop_duplicates().sort_values(ascending=False)
108d13e9b48SJed Brown        qpts = qpts.reset_index(drop=True)
109d13e9b48SJed Brown        print('Degree: %i, quadrature points:' % sol_p, qpts[0])
110d13e9b48SJed Brown        # Generate plot data
111d13e9b48SJed Brown        d = [[run['degree'], run['num_elem'], 1. * run['num_unknowns'] / num_nodes / vdim,
112d13e9b48SJed Brown              run['cg_iteration_dps'] / num_nodes]
113d13e9b48SJed Brown             for index, run in
114d13e9b48SJed Brown             pl_runs.loc[(pl_runs['degree'] == sol_p) |
115d13e9b48SJed Brown                         (pl_runs['quadrature_pts'] == qpts[0])].iterrows()]
116d13e9b48SJed Brown        d = [[e[2], e[3]] for e in d if e[0] == sol_p]
117d13e9b48SJed Brown        # (DOFs/[sec/iter]/node)/(DOFs/node) = iter/sec
118d13e9b48SJed Brown        d = [[nun,
119d13e9b48SJed Brown              min([e[1] for e in d if e[0] == nun]),
120d13e9b48SJed Brown              max([e[1] for e in d if e[0] == nun])]
121d13e9b48SJed Brown             for nun in set([e[0] for e in d])]
122d13e9b48SJed Brown        d = asarray(sorted(d))
123d13e9b48SJed Brown        # Plot
124d13e9b48SJed Brown        plot(d[:, 0], d[:, 2], 'o-', color=colors[i % cm_size],
125d13e9b48SJed Brown             label='p=%i' % sol_p)
126d13e9b48SJed Brown        if list(d[:, 1]) != list(d[:, 2]):
127d13e9b48SJed Brown            plot(d[:, 0], d[:, 1], 'o-', color=colors[i])
128dec49e00SJed Brown            fill_between(d[:, 0], d[:, 1], d[:, 2],
129dec49e00SJed Brown                         facecolor=colors[i], alpha=0.2)
130d13e9b48SJed Brown        # Continue if only 1 set of qpts
131d13e9b48SJed Brown        if len(qpts) == 1:
132d13e9b48SJed Brown            i = i + 1
133d13e9b48SJed Brown            continue
134d13e9b48SJed Brown        # Second set of qpts
135d13e9b48SJed Brown        d = [[run['degree'], run['num_elem'], 1. * run['num_unknowns'] / num_nodes / vdim,
136d13e9b48SJed Brown              run['cg_iteration_dps'] / num_nodes]
137d13e9b48SJed Brown             for index, run in
138d13e9b48SJed Brown             pl_runs.loc[(pl_runs['degree'] == sol_p) |
139d13e9b48SJed Brown                         (pl_runs['quadrature_pts'] == qpts[1])].iterrows()]
140d13e9b48SJed Brown        d = [[e[2], e[3]] for e in d if e[0] == sol_p]
141d13e9b48SJed Brown        if len(d) == 0:
142d13e9b48SJed Brown            i = i + 1
143d13e9b48SJed Brown            continue
144d13e9b48SJed Brown        d = [[nun,
145d13e9b48SJed Brown              min([e[1] for e in d if e[0] == nun]),
146d13e9b48SJed Brown              max([e[1] for e in d if e[0] == nun])]
147d13e9b48SJed Brown             for nun in set([e[0] for e in d])]
148d13e9b48SJed Brown        d = asarray(sorted(d))
149d13e9b48SJed Brown        plot(d[:, 0], d[:, 2], 's--', color=colors[i],
150d13e9b48SJed Brown             label='p=%i' % sol_p)
151d13e9b48SJed Brown        if list(d[:, 1]) != list(d[:, 2]):
152d13e9b48SJed Brown            plot(d[:, 0], d[:, 1], 's--', color=colors[i])
153d13e9b48SJed Brown        ##
154d13e9b48SJed Brown        i = i + 1
155d13e9b48SJed Brown    ##
156d13e9b48SJed Brown    if draw_iter_lines:
157d13e9b48SJed Brown        y0, y1 = ymin_iter_lines, ymax_iter_lines
158d13e9b48SJed Brown        y = asarray([y0, y1]) if log_y else exp(linspace(log(y0), log(y1)))
159d13e9b48SJed Brown        slope1 = 600.
160d13e9b48SJed Brown        slope2 = 6000.
161d13e9b48SJed Brown        plot(y / slope1, y, 'k--', label='%g iter/s' % (slope1 / vdim))
162d13e9b48SJed Brown        plot(y / slope2, y, 'k-', label='%g iter/s' % (slope2 / vdim))
163d13e9b48SJed Brown
164d13e9b48SJed Brown    # Plot information
165d13e9b48SJed Brown    title(r'%i node%s $\times$ %i ranks, %s, %s, %s' % (
166d13e9b48SJed Brown          num_nodes, '' if num_nodes == 1 else 's',
167d13e9b48SJed Brown          num_procs_node, backend, backend_memtype, test_short), fontsize=16)
168d13e9b48SJed Brown    xscale('log')  # subsx=[2,4,6,8]
169d13e9b48SJed Brown    if log_y:
170d13e9b48SJed Brown        yscale('log')
171d13e9b48SJed Brown    if 'x_range' in vars() and len(x_range) == 2:
172d13e9b48SJed Brown        xlim(x_range)
173d13e9b48SJed Brown    if 'y_range' in vars() and len(y_range) == 2:
174d13e9b48SJed Brown        ylim(y_range)
175d13e9b48SJed Brown    grid('on', color='gray', ls='dotted')
176d13e9b48SJed Brown    grid('on', axis='both', which='minor', color='gray', ls='dotted')
177d13e9b48SJed Brown    plt.tick_params(labelsize=14)
178d13e9b48SJed Brown    exptext = gca().yaxis.get_offset_text()
179d13e9b48SJed Brown    exptext.set_size(14)
180d13e9b48SJed Brown    gca().set_axisbelow(True)
181d13e9b48SJed Brown    xlabel('Points per compute node', fontsize=14)
182d13e9b48SJed Brown    ylabel('[DOFs x CG iterations] / [compute nodes x seconds]', fontsize=14)
183d13e9b48SJed Brown    legend(ncol=legend_ncol, loc='best', fontsize=13)
184d13e9b48SJed Brown
185d13e9b48SJed Brown    # Write
186d13e9b48SJed Brown    if write_figures:  # write .pdf file?
187d13e9b48SJed Brown        short_backend = backend.replace('/', '')
188d13e9b48SJed Brown        test_short_save = test_short.replace(' ', '')
189d13e9b48SJed Brown        pdf_file = 'plot_%s_%s_%s_%s_N%03i_pn%i.pdf' % (
190d13e9b48SJed Brown            code, test_short_save, short_backend, backend_memtype, num_nodes, num_procs_node)
191d13e9b48SJed Brown        print('\nsaving figure --> %s' % pdf_file)
192d13e9b48SJed Brown        savefig(pdf_file, format='pdf', bbox_inches='tight')
193d13e9b48SJed Brown
194d13e9b48SJed Brownif show_figures:  # show the figures?
195d13e9b48SJed Brown    print('\nShowing figures ...')
196d13e9b48SJed Brown    show()
197