xref: /libCEED/examples/fluids/navierstokes.c (revision 36b31e276ef6aee5a91c969ce1e558ff92ee537f)
13d8e8822SJeremy L Thompson // Copyright (c) 2017-2022, Lawrence Livermore National Security, LLC and other CEED contributors.
23d8e8822SJeremy L Thompson // All Rights Reserved. See the top-level LICENSE and NOTICE files for details.
3ccaff030SJeremy L Thompson //
43d8e8822SJeremy L Thompson // SPDX-License-Identifier: BSD-2-Clause
5ccaff030SJeremy L Thompson //
63d8e8822SJeremy L Thompson // This file is part of CEED:  http://github.com/ceed
7ccaff030SJeremy L Thompson 
8ccaff030SJeremy L Thompson //                        libCEED + PETSc Example: Navier-Stokes
9ccaff030SJeremy L Thompson //
10ccaff030SJeremy L Thompson // This example demonstrates a simple usage of libCEED with PETSc to solve a
11ccaff030SJeremy L Thompson // Navier-Stokes problem.
12ccaff030SJeremy L Thompson //
13ccaff030SJeremy L Thompson // The code is intentionally "raw", using only low-level communication
14ccaff030SJeremy L Thompson // primitives.
15ccaff030SJeremy L Thompson //
16ccaff030SJeremy L Thompson // Build with:
17ccaff030SJeremy L Thompson //
18ccaff030SJeremy L Thompson //     make [PETSC_DIR=</path/to/petsc>] [CEED_DIR=</path/to/libceed>] navierstokes
19ccaff030SJeremy L Thompson //
20ccaff030SJeremy L Thompson // Sample runs:
21ccaff030SJeremy L Thompson //
2284d34d69SLeila Ghaffari //     ./navierstokes -ceed /cpu/self -problem density_current -degree 1
2328688798Sjeremylt //     ./navierstokes -ceed /gpu/cuda -problem advection -degree 1
24ccaff030SJeremy L Thompson //
25cffd6fdcSJed Brown //TESTARGS(name="channel") -ceed {ceed_resource} -test -options_file examples/fluids/channel.yaml -compare_final_state_atol 1E-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-channel.bin
2688626eedSJames Wright //TESTARGS(name="dc_explicit") -ceed {ceed_resource} -test -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -bc_slip_x 5,6 -bc_slip_y 3,4 -bc_Slip_z 1,2 -units_kilogram 1e-9 -center 62.5,62.5,187.5 -rc 100. -thetaC -35. -mu 75 -ts_dt 1e-3 -units_meter 1e-2 -units_second 1e-2 -compare_final_state_atol 1E-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-dc-explicit.bin
2788626eedSJames Wright //TESTARGS(name="dc_implicit_stab_none") -ceed {ceed_resource} -test -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -bc_slip_x 5,6 -bc_slip_y 3,4 -bc_Slip_z 1,2 -units_kilogram 1e-9 -center 62.5,62.5,187.5 -rc 100. -thetaC -35. -mu 75 -units_meter 1e-2 -units_second 1e-2 -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -ts_type alpha -compare_final_state_atol 5E-4 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-dc-implicit-stab-none.bin
282fe7aee7SLeila Ghaffari //TESTARGS(name="adv_rotation_explicit_strong") -ceed {ceed_resource} -test -problem advection -strong_form 1 -degree 3 -dm_plex_box_faces 2,2,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -bc_wall 1,2,3,4,5,6 -wall_comps 4 -units_kilogram 1e-9 -rc 100. -ts_dt 1e-3 -compare_final_state_atol 1E-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-adv-rotation-explicit-strong.bin
292fe7aee7SLeila Ghaffari //TESTARGS(name="adv_rotation_implicit_sharp_cylinder") -ceed {ceed_resource} -test -problem advection -bubble_type cylinder -bubble_continuity back_sharp -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -bc_Slip_z 1,2 -bc_wall 3,4,5,6 -wall_comps 4 -units_kilogram 1e-9 -rc 100. -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -ts_type alpha -compare_final_state_atol 5E-4 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-adv-rotation-implicit-sharp-cylinder.bin
302fe7aee7SLeila Ghaffari //TESTARGS(name="adv_rotation_implicit_stab_supg") -ceed {ceed_resource} -test -problem advection -CtauS .3 -stab supg -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -bc_wall 1,2,3,4,5,6 -wall_comps 4 -units_kilogram 1e-9 -rc 100. -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -ts_type alpha -compare_final_state_atol 5E-4 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-adv-rotation-implicit-stab-supg.bin
312fe7aee7SLeila Ghaffari //TESTARGS(name="adv_translation_implicit_stab_su") -ceed {ceed_resource} -test -problem advection -CtauS .3 -stab su -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -units_kilogram 1e-9 -rc 100. -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -ts_type alpha -wind_type translation -wind_translation .53,-1.33,-2.65 -bc_inflow 1,2,3,4,5,6 -compare_final_state_atol 5E-4 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-adv-translation-implicit-stab-su.bin
322fe7aee7SLeila Ghaffari //TESTARGS(name="adv2d_rotation_explicit_strong") -ceed {ceed_resource} -test -problem advection2d -strong_form 1 -degree 3 -dm_plex_box_faces 2,2 -dm_plex_box_lower 0,0 -dm_plex_box_upper 125,125 -bc_wall 1,2,3,4 -wall_comps 4 -units_kilogram 1e-9 -rc 100. -ts_dt 1e-3 -compare_final_state_atol 1E-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-adv2d-rotation-explicit-strong.bin
332fe7aee7SLeila Ghaffari //TESTARGS(name="adv2d_rotation_implicit_stab_supg") -ceed {ceed_resource} -test -problem advection2d -CtauS .3 -stab supg -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0 -dm_plex_box_upper 125,125 -bc_wall 1,2,3,4 -wall_comps 4 -units_kilogram 1e-9 -rc 100. -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -ts_type alpha -compare_final_state_atol 5E-4 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-adv2d-rotation-implicit-stab-supg.bin
342fe7aee7SLeila Ghaffari //TESTARGS(name="adv2d_translation_implicit_stab_su") -ceed {ceed_resource} -test -problem advection2d -CtauS .3 -stab su -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0 -dm_plex_box_upper 125,125 -units_kilogram 1e-9 -rc 100. -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -ts_type alpha -wind_type translation -wind_translation .53,-1.33,0 -bc_inflow 1,2,3,4 -compare_final_state_atol 5E-4 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-adv2d-translation-implicit-stab-su.bin
352fe7aee7SLeila Ghaffari //TESTARGS(name="euler_implicit") -ceed {ceed_resource} -test -problem euler_vortex -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -units_meter 1e-4 -units_second 1e-4 -mean_velocity 1.4,-2.,0 -bc_inflow 4,6 -bc_outflow 3,5 -bc_slip_z 1,2 -vortex_strength 2 -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -ts_type alpha -compare_final_state_atol 5E-4 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-euler-implicit.bin
362fe7aee7SLeila Ghaffari //TESTARGS(name="euler_explicit") -ceed {ceed_resource} -test -problem euler_vortex -degree 3 -dm_plex_box_faces 2,2,1 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -units_meter 1e-4 -units_second 1e-4 -mean_velocity 1.4,-2.,0 -bc_inflow 4,6 -bc_outflow 3,5 -bc_slip_z 1,2 -vortex_strength 2 -ts_dt 1e-7 -ts_rk_type 5bs -ts_rtol 1e-10 -ts_atol 1e-10 -compare_final_state_atol 1E-7 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-euler-explicit.bin
37019b7682STimothy Aiken //TESTARGS(name="shocktube_explicit_su_yzb") -ceed {ceed_resource} -test -problem shocktube -degree 1 -dm_plex_box_faces 50,1,1 -units_meter 1e-2 units_second 1e-2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 1000,20,20 -dm_plex_dim 3 -bc_slip_x 5,6 -bc_slip_y 3,4 -bc_Slip_z 1,2 -yzb -stab su -compare_final_state_atol 1E-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-shocktube-explicit-su-yzb.bin
38ba6664aeSJames Wright //TESTARGS(name="blasius_STG") -ceed {ceed_resource} -test -options_file examples/fluids/tests-output/blasius_stgtest.yaml -compare_final_state_atol 1E-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-blasius_STG.bin
39ba6664aeSJames Wright //TESTARGS(name="blasius_STG_weakT") -ceed {ceed_resource} -test -options_file examples/fluids/tests-output/blasius_stgtest.yaml -compare_final_state_atol 1E-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-blasius_STG_weakT.bin -weakT
40ccaff030SJeremy L Thompson 
41ccaff030SJeremy L Thompson /// @file
42ccaff030SJeremy L Thompson /// Navier-Stokes example using PETSc
43ccaff030SJeremy L Thompson 
44ccaff030SJeremy L Thompson const char help[] = "Solve Navier-Stokes using PETSc and libCEED\n";
45ccaff030SJeremy L Thompson 
4677841947SLeila Ghaffari #include "navierstokes.h"
47ccaff030SJeremy L Thompson 
48ccaff030SJeremy L Thompson int main(int argc, char **argv) {
4977841947SLeila Ghaffari   // ---------------------------------------------------------------------------
5077841947SLeila Ghaffari   // Initialize PETSc
5177841947SLeila Ghaffari   // ---------------------------------------------------------------------------
52ccaff030SJeremy L Thompson   PetscInt ierr;
53ccaff030SJeremy L Thompson   ierr = PetscInitialize(&argc, &argv, NULL, help);
54ccaff030SJeremy L Thompson   if (ierr) return ierr;
55ccaff030SJeremy L Thompson 
5677841947SLeila Ghaffari   // ---------------------------------------------------------------------------
5777841947SLeila Ghaffari   // Create structs
5877841947SLeila Ghaffari   // ---------------------------------------------------------------------------
5977841947SLeila Ghaffari   AppCtx app_ctx;
6077841947SLeila Ghaffari   ierr = PetscCalloc1(1, &app_ctx); CHKERRQ(ierr);
6177841947SLeila Ghaffari 
6277841947SLeila Ghaffari   ProblemData *problem = NULL;
6377841947SLeila Ghaffari   ierr = PetscCalloc1(1, &problem); CHKERRQ(ierr);
6477841947SLeila Ghaffari 
6577841947SLeila Ghaffari   User user;
66ccaff030SJeremy L Thompson   ierr = PetscCalloc1(1, &user); CHKERRQ(ierr);
67ccaff030SJeremy L Thompson 
6877841947SLeila Ghaffari   CeedData ceed_data;
6977841947SLeila Ghaffari   ierr = PetscCalloc1(1, &ceed_data); CHKERRQ(ierr);
7077841947SLeila Ghaffari 
7177841947SLeila Ghaffari   SimpleBC bc;
7277841947SLeila Ghaffari   ierr = PetscCalloc1(1, &bc); CHKERRQ(ierr);
7377841947SLeila Ghaffari 
7477841947SLeila Ghaffari   Physics phys_ctx;
7577841947SLeila Ghaffari   ierr = PetscCalloc1(1, &phys_ctx); CHKERRQ(ierr);
7677841947SLeila Ghaffari 
7777841947SLeila Ghaffari   Units units;
7877841947SLeila Ghaffari   ierr = PetscCalloc1(1, &units); CHKERRQ(ierr);
7977841947SLeila Ghaffari 
8077841947SLeila Ghaffari   user->app_ctx = app_ctx;
8177841947SLeila Ghaffari   user->units   = units;
8277841947SLeila Ghaffari   user->phys    = phys_ctx;
83*36b31e27SJames Wright   problem->bc_from_ics = PETSC_TRUE;
8477841947SLeila Ghaffari 
8577841947SLeila Ghaffari   // ---------------------------------------------------------------------------
8677841947SLeila Ghaffari   // Process command line options
8777841947SLeila Ghaffari   // ---------------------------------------------------------------------------
8877841947SLeila Ghaffari   // -- Register problems to be available on the command line
8977841947SLeila Ghaffari   ierr = RegisterProblems_NS(app_ctx); CHKERRQ(ierr);
9077841947SLeila Ghaffari 
9177841947SLeila Ghaffari   // -- Process general command line options
9277841947SLeila Ghaffari   MPI_Comm comm = PETSC_COMM_WORLD;
9377841947SLeila Ghaffari   user->comm = comm;
942fe7aee7SLeila Ghaffari   ierr = ProcessCommandLineOptions(comm, app_ctx, bc); CHKERRQ(ierr);
9577841947SLeila Ghaffari 
9677841947SLeila Ghaffari   // ---------------------------------------------------------------------------
9777841947SLeila Ghaffari   // Initialize libCEED
9877841947SLeila Ghaffari   // ---------------------------------------------------------------------------
9977841947SLeila Ghaffari   // -- Initialize backend
10077841947SLeila Ghaffari   Ceed ceed;
10177841947SLeila Ghaffari   CeedInit(app_ctx->ceed_resource, &ceed);
10277841947SLeila Ghaffari   user->ceed = ceed;
103ccaff030SJeremy L Thompson 
10477841947SLeila Ghaffari   // -- Check preferred MemType
10577841947SLeila Ghaffari   CeedMemType mem_type_backend;
10677841947SLeila Ghaffari   CeedGetPreferredMemType(ceed, &mem_type_backend);
10777841947SLeila Ghaffari 
10877841947SLeila Ghaffari   // ---------------------------------------------------------------------------
10977841947SLeila Ghaffari   // Set up global mesh
11077841947SLeila Ghaffari   // ---------------------------------------------------------------------------
1111864f1c2SLeila Ghaffari   // -- Create DM
11277841947SLeila Ghaffari   DM dm;
1131864f1c2SLeila Ghaffari   ierr = CreateDM(comm, problem, &dm); CHKERRQ(ierr);
11477841947SLeila Ghaffari   VecType vec_type = NULL;
11577841947SLeila Ghaffari   switch (mem_type_backend) {
11677841947SLeila Ghaffari   case CEED_MEM_HOST: vec_type = VECSTANDARD; break;
11777841947SLeila Ghaffari   case CEED_MEM_DEVICE: {
11877841947SLeila Ghaffari     const char *resolved;
11977841947SLeila Ghaffari     CeedGetResource(ceed, &resolved);
12077841947SLeila Ghaffari     if (strstr(resolved, "/gpu/cuda")) vec_type = VECCUDA;
12177841947SLeila Ghaffari     else if (strstr(resolved, "/gpu/hip")) vec_type = VECHIP;
12277841947SLeila Ghaffari     else vec_type = VECSTANDARD;
123ccaff030SJeremy L Thompson   }
124ccaff030SJeremy L Thompson   }
12577841947SLeila Ghaffari   ierr = DMSetVecType(dm, vec_type); CHKERRQ(ierr);
12677841947SLeila Ghaffari   user->dm = dm;
12777841947SLeila Ghaffari 
1281864f1c2SLeila Ghaffari   // ---------------------------------------------------------------------------
1291864f1c2SLeila Ghaffari   // Choose the problem from the list of registered problems
1301864f1c2SLeila Ghaffari   // ---------------------------------------------------------------------------
1311864f1c2SLeila Ghaffari   {
132a0add3c9SJed Brown     PetscErrorCode (*p)(ProblemData *, DM, void *);
1331864f1c2SLeila Ghaffari     ierr = PetscFunctionListFind(app_ctx->problems, app_ctx->problem_name, &p);
1341864f1c2SLeila Ghaffari     CHKERRQ(ierr);
1357578c821SJeremy L Thompson     if (!p) SETERRQ(PETSC_COMM_SELF, 1, "Problem '%s' not found",
1361864f1c2SLeila Ghaffari                       app_ctx->problem_name);
137a0add3c9SJed Brown     ierr = (*p)(problem, dm, &user); CHKERRQ(ierr);
1381864f1c2SLeila Ghaffari   }
1391864f1c2SLeila Ghaffari 
14077841947SLeila Ghaffari   // -- Set up DM
141c95f9967SJed Brown   ierr = SetUpDM(dm, problem, app_ctx->degree, bc, phys_ctx);
1425bf10c6fSLeila Ghaffari   CHKERRQ(ierr);
14384d34d69SLeila Ghaffari 
14477841947SLeila Ghaffari   // -- Refine DM for high-order viz
14577841947SLeila Ghaffari   if (app_ctx->viz_refine) {
146c95f9967SJed Brown     ierr = VizRefineDM(dm, user, problem, bc, phys_ctx);
147ccaff030SJeremy L Thompson     CHKERRQ(ierr);
14877841947SLeila Ghaffari   }
14977841947SLeila Ghaffari 
15077841947SLeila Ghaffari   // ---------------------------------------------------------------------------
15177841947SLeila Ghaffari   // Set up libCEED
15277841947SLeila Ghaffari   // ---------------------------------------------------------------------------
15377841947SLeila Ghaffari   // -- Set up libCEED objects
154c95f9967SJed Brown   ierr = SetupLibceed(ceed, ceed_data, dm, user, app_ctx, problem, bc);
155d0b732dbSLeila Ghaffari   CHKERRQ(ierr);
15677841947SLeila Ghaffari 
15777841947SLeila Ghaffari   // ---------------------------------------------------------------------------
15877841947SLeila Ghaffari   // Set up ICs
15977841947SLeila Ghaffari   // ---------------------------------------------------------------------------
16077841947SLeila Ghaffari   // -- Set up global state vector Q
16177841947SLeila Ghaffari   Vec Q;
162ccaff030SJeremy L Thompson   ierr = DMCreateGlobalVector(dm, &Q); CHKERRQ(ierr);
16377841947SLeila Ghaffari   ierr = VecZeroEntries(Q); CHKERRQ(ierr);
164ccaff030SJeremy L Thompson 
16577841947SLeila Ghaffari   // -- Set up local state vector Q_loc
16677841947SLeila Ghaffari   Vec Q_loc;
16777841947SLeila Ghaffari   ierr = DMGetLocalVector(dm, &Q_loc); CHKERRQ(ierr);
16884d34d69SLeila Ghaffari 
16977841947SLeila Ghaffari   // -- Fix multiplicity for ICs
170841e4c73SJed Brown   ierr = ICs_FixMultiplicity(dm, ceed_data, user, Q_loc, Q, 0.0); CHKERRQ(ierr);
17184d34d69SLeila Ghaffari 
17277841947SLeila Ghaffari   // ---------------------------------------------------------------------------
17377841947SLeila Ghaffari   // Set up lumped mass matrix
17477841947SLeila Ghaffari   // ---------------------------------------------------------------------------
17577841947SLeila Ghaffari   // -- Set up global mass vector
17677841947SLeila Ghaffari   ierr = VecDuplicate(Q, &user->M); CHKERRQ(ierr);
17777841947SLeila Ghaffari 
17877841947SLeila Ghaffari   // -- Compute lumped mass matrix
17977841947SLeila Ghaffari   ierr = ComputeLumpedMassMatrix(ceed, dm, ceed_data, user->M); CHKERRQ(ierr);
18077841947SLeila Ghaffari 
18177841947SLeila Ghaffari   // ---------------------------------------------------------------------------
18277841947SLeila Ghaffari   // Record boundary values from initial condition
18377841947SLeila Ghaffari   // ---------------------------------------------------------------------------
18477841947SLeila Ghaffari   // -- This overrides DMPlexInsertBoundaryValues().
18577841947SLeila Ghaffari   //    We use this for the main simulation DM because the reference
18677841947SLeila Ghaffari   //    DMPlexInsertBoundaryValues() is very slow. If we disable this, we should
18777841947SLeila Ghaffari   //    still get the same results due to the problem->bc function, but with
18877841947SLeila Ghaffari   //    potentially much slower execution.
189*36b31e27SJames Wright   if (problem->bc_from_ics) {
190*36b31e27SJames Wright     ierr = SetBCsFromICs_NS(dm, Q, Q_loc); CHKERRQ(ierr);
191*36b31e27SJames Wright   }
19277841947SLeila Ghaffari 
19377841947SLeila Ghaffari   // ---------------------------------------------------------------------------
19477841947SLeila Ghaffari   // Create output directory
19577841947SLeila Ghaffari   // ---------------------------------------------------------------------------
19677841947SLeila Ghaffari   PetscMPIInt rank;
19777841947SLeila Ghaffari   MPI_Comm_rank(comm, &rank);
19877841947SLeila Ghaffari   if (!rank) {ierr = PetscMkdir(app_ctx->output_dir); CHKERRQ(ierr);}
19977841947SLeila Ghaffari 
20077841947SLeila Ghaffari   // ---------------------------------------------------------------------------
20177841947SLeila Ghaffari   // Gather initial Q values in case of continuation of simulation
20277841947SLeila Ghaffari   // ---------------------------------------------------------------------------
20377841947SLeila Ghaffari   // -- Set up initial values from binary file
20477841947SLeila Ghaffari   if (app_ctx->cont_steps) {
20577841947SLeila Ghaffari     ierr = SetupICsFromBinary(comm, app_ctx, Q); CHKERRQ(ierr);
20677841947SLeila Ghaffari   }
20777841947SLeila Ghaffari 
20877841947SLeila Ghaffari   // ---------------------------------------------------------------------------
20977841947SLeila Ghaffari   // Print problem summary
21077841947SLeila Ghaffari   // ---------------------------------------------------------------------------
21177841947SLeila Ghaffari   if (!app_ctx->test_mode) {
21277841947SLeila Ghaffari     // Header and rank
21377841947SLeila Ghaffari     char host_name[PETSC_MAX_PATH_LEN];
214ccaff030SJeremy L Thompson     int  comm_size;
21577841947SLeila Ghaffari     ierr = PetscGetHostName(host_name, sizeof host_name); CHKERRQ(ierr);
216ccaff030SJeremy L Thompson     ierr = MPI_Comm_size(comm, &comm_size); CHKERRQ(ierr);
21784d34d69SLeila Ghaffari     ierr = PetscPrintf(comm,
21884d34d69SLeila Ghaffari                        "\n-- Navier-Stokes solver - libCEED + PETSc --\n"
21977841947SLeila Ghaffari                        "  MPI:\n"
22077841947SLeila Ghaffari                        "    Host Name                          : %s\n"
22177841947SLeila Ghaffari                        "    Total ranks                        : %d\n",
22277841947SLeila Ghaffari                        host_name, comm_size); CHKERRQ(ierr);
22377841947SLeila Ghaffari 
22477841947SLeila Ghaffari     // Problem specific info
225b1289648SJed Brown     ierr = problem->print_info(problem, app_ctx); CHKERRQ(ierr);
22677841947SLeila Ghaffari 
22777841947SLeila Ghaffari     // libCEED
22877841947SLeila Ghaffari     const char *used_resource;
22977841947SLeila Ghaffari     CeedGetResource(ceed, &used_resource);
23077841947SLeila Ghaffari     ierr = PetscPrintf(comm,
23184d34d69SLeila Ghaffari                        "  libCEED:\n"
23284d34d69SLeila Ghaffari                        "    libCEED Backend                    : %s\n"
23377841947SLeila Ghaffari                        "    libCEED Backend MemType            : %s\n",
23477841947SLeila Ghaffari                        used_resource, CeedMemTypes[mem_type_backend]); CHKERRQ(ierr);
23577841947SLeila Ghaffari     // PETSc
2364a2566fdSLeila Ghaffari     char box_faces_str[PETSC_MAX_PATH_LEN] = "3,3,3";
2374a2566fdSLeila Ghaffari     if (problem->dim == 2) box_faces_str[3] = '\0';
23877841947SLeila Ghaffari     ierr = PetscOptionsGetString(NULL, NULL, "-dm_plex_box_faces", box_faces_str,
23977841947SLeila Ghaffari                                  sizeof(box_faces_str), NULL); CHKERRQ(ierr);
24077841947SLeila Ghaffari     ierr = PetscPrintf(comm,
24177841947SLeila Ghaffari                        "  PETSc:\n"
24277841947SLeila Ghaffari                        "    Box Faces                          : %s\n"
24377841947SLeila Ghaffari                        "    Time Stepping Scheme               : %s\n",
24477841947SLeila Ghaffari                        box_faces_str, phys_ctx->implicit ? "implicit" : "explicit"); CHKERRQ(ierr);
24577841947SLeila Ghaffari     // Mesh
24677841947SLeila Ghaffari     const PetscInt num_comp_q = 5;
24777841947SLeila Ghaffari     CeedInt        glob_dofs, owned_dofs;
24877841947SLeila Ghaffari     PetscInt       glob_nodes, owned_nodes;
24977841947SLeila Ghaffari     const CeedInt  num_P = app_ctx->degree + 1,
25077841947SLeila Ghaffari                    num_Q = num_P + app_ctx->q_extra;
25177841947SLeila Ghaffari     // -- Get global size
25277841947SLeila Ghaffari     ierr = VecGetSize(Q, &glob_dofs); CHKERRQ(ierr);
25377841947SLeila Ghaffari     ierr = VecGetLocalSize(Q, &owned_dofs); CHKERRQ(ierr);
25477841947SLeila Ghaffari     glob_nodes = glob_dofs/num_comp_q;
25577841947SLeila Ghaffari     // -- Get local size
25677841947SLeila Ghaffari     ierr = VecGetSize(Q_loc, &owned_nodes); CHKERRQ(ierr);
25777841947SLeila Ghaffari     owned_nodes /= num_comp_q;
25877841947SLeila Ghaffari     ierr = PetscPrintf(comm,
25984d34d69SLeila Ghaffari                        "  Mesh:\n"
26084d34d69SLeila Ghaffari                        "    Number of 1D Basis Nodes (P)       : %d\n"
26184d34d69SLeila Ghaffari                        "    Number of 1D Quadrature Points (Q) : %d\n"
26208140895SJed Brown                        "    Global DoFs                        : %" PetscInt_FMT "\n"
26308140895SJed Brown                        "    Owned DoFs                         : %" PetscInt_FMT "\n"
26408140895SJed Brown                        "    DoFs per node                      : %" PetscInt_FMT "\n"
26508140895SJed Brown                        "    Global nodes                       : %" PetscInt_FMT "\n"
26608140895SJed Brown                        "    Owned nodes                        : %" PetscInt_FMT "\n",
26777841947SLeila Ghaffari                        num_P, num_Q, glob_dofs, owned_dofs, num_comp_q,
26877841947SLeila Ghaffari                        glob_nodes, owned_nodes); CHKERRQ(ierr);
2690c6c0b13SLeila Ghaffari   }
27077841947SLeila Ghaffari   // -- Restore Q_loc
27177841947SLeila Ghaffari   ierr = DMRestoreLocalVector(dm, &Q_loc); CHKERRQ(ierr);
2720c6c0b13SLeila Ghaffari 
27377841947SLeila Ghaffari   // ---------------------------------------------------------------------------
27477841947SLeila Ghaffari   // TS: Create, setup, and solve
27577841947SLeila Ghaffari   // ---------------------------------------------------------------------------
27677841947SLeila Ghaffari   TS ts;
27777841947SLeila Ghaffari   PetscScalar final_time;
27877841947SLeila Ghaffari   ierr = TSSolve_NS(dm, user, app_ctx, phys_ctx, &Q, &final_time, &ts);
279ccaff030SJeremy L Thompson   CHKERRQ(ierr);
280ccaff030SJeremy L Thompson 
28177841947SLeila Ghaffari   // ---------------------------------------------------------------------------
28277841947SLeila Ghaffari   // Post-processing
28377841947SLeila Ghaffari   // ---------------------------------------------------------------------------
284841e4c73SJed Brown   ierr = PostProcess_NS(ts, ceed_data, dm, problem, user, Q, final_time);
2854438636fSLeila Ghaffari   CHKERRQ(ierr);
286777ff853SJeremy L Thompson 
28777841947SLeila Ghaffari   // ---------------------------------------------------------------------------
28877841947SLeila Ghaffari   // Destroy libCEED objects
28977841947SLeila Ghaffari   // ---------------------------------------------------------------------------
29077841947SLeila Ghaffari   // -- Vectors
29177841947SLeila Ghaffari   CeedVectorDestroy(&ceed_data->x_coord);
29277841947SLeila Ghaffari   CeedVectorDestroy(&ceed_data->q_data);
29377841947SLeila Ghaffari   CeedVectorDestroy(&user->q_ceed);
29477841947SLeila Ghaffari   CeedVectorDestroy(&user->q_dot_ceed);
29577841947SLeila Ghaffari   CeedVectorDestroy(&user->g_ceed);
296777ff853SJeremy L Thompson 
29777841947SLeila Ghaffari   // -- QFunctions
29877841947SLeila Ghaffari   CeedQFunctionDestroy(&ceed_data->qf_setup_vol);
29977841947SLeila Ghaffari   CeedQFunctionDestroy(&ceed_data->qf_ics);
30077841947SLeila Ghaffari   CeedQFunctionDestroy(&ceed_data->qf_rhs_vol);
30177841947SLeila Ghaffari   CeedQFunctionDestroy(&ceed_data->qf_ifunction_vol);
30277841947SLeila Ghaffari   CeedQFunctionDestroy(&ceed_data->qf_setup_sur);
3032fe7aee7SLeila Ghaffari   CeedQFunctionDestroy(&ceed_data->qf_apply_inflow);
3042fe7aee7SLeila Ghaffari   CeedQFunctionDestroy(&ceed_data->qf_apply_outflow);
305777ff853SJeremy L Thompson 
30677841947SLeila Ghaffari   // -- Bases
30777841947SLeila Ghaffari   CeedBasisDestroy(&ceed_data->basis_q);
30877841947SLeila Ghaffari   CeedBasisDestroy(&ceed_data->basis_x);
30977841947SLeila Ghaffari   CeedBasisDestroy(&ceed_data->basis_xc);
31077841947SLeila Ghaffari   CeedBasisDestroy(&ceed_data->basis_q_sur);
31177841947SLeila Ghaffari   CeedBasisDestroy(&ceed_data->basis_x_sur);
3125bf10c6fSLeila Ghaffari 
31377841947SLeila Ghaffari   // -- Restrictions
31477841947SLeila Ghaffari   CeedElemRestrictionDestroy(&ceed_data->elem_restr_q);
31577841947SLeila Ghaffari   CeedElemRestrictionDestroy(&ceed_data->elem_restr_x);
31677841947SLeila Ghaffari   CeedElemRestrictionDestroy(&ceed_data->elem_restr_qd_i);
3175bf10c6fSLeila Ghaffari 
31877841947SLeila Ghaffari   // -- Operators
31977841947SLeila Ghaffari   CeedOperatorDestroy(&ceed_data->op_setup_vol);
32077841947SLeila Ghaffari   CeedOperatorDestroy(&ceed_data->op_ics);
3216a0edaf9SLeila Ghaffari   CeedOperatorDestroy(&user->op_rhs_vol);
3226a0edaf9SLeila Ghaffari   CeedOperatorDestroy(&user->op_ifunction_vol);
323ccaff030SJeremy L Thompson   CeedOperatorDestroy(&user->op_rhs);
324ccaff030SJeremy L Thompson   CeedOperatorDestroy(&user->op_ifunction);
325ccaff030SJeremy L Thompson 
32677841947SLeila Ghaffari   // -- Ceed
32777841947SLeila Ghaffari   CeedDestroy(&ceed);
32877841947SLeila Ghaffari 
32977841947SLeila Ghaffari   // ---------------------------------------------------------------------------
330ccaff030SJeremy L Thompson   // Clean up PETSc
33177841947SLeila Ghaffari   // ---------------------------------------------------------------------------
33277841947SLeila Ghaffari   // -- Vectors
333ccaff030SJeremy L Thompson   ierr = VecDestroy(&Q); CHKERRQ(ierr);
334ccaff030SJeremy L Thompson   ierr = VecDestroy(&user->M); CHKERRQ(ierr);
33577841947SLeila Ghaffari 
33677841947SLeila Ghaffari   // -- Matrices
33777841947SLeila Ghaffari   ierr = MatDestroy(&user->interp_viz); CHKERRQ(ierr);
33877841947SLeila Ghaffari 
33977841947SLeila Ghaffari   // -- DM
340ccaff030SJeremy L Thompson   ierr = DMDestroy(&dm); CHKERRQ(ierr);
34177841947SLeila Ghaffari   ierr = DMDestroy(&user->dm_viz); CHKERRQ(ierr);
34277841947SLeila Ghaffari 
34377841947SLeila Ghaffari   // -- TS
34477841947SLeila Ghaffari   ierr = TSDestroy(&ts); CHKERRQ(ierr);
34577841947SLeila Ghaffari 
34677841947SLeila Ghaffari   // -- Function list
34777841947SLeila Ghaffari   ierr = PetscFunctionListDestroy(&app_ctx->problems); CHKERRQ(ierr);
34877841947SLeila Ghaffari 
349a0add3c9SJed Brown   ierr = PetscFree(problem->bc_ctx); CHKERRQ(ierr);
350a0add3c9SJed Brown 
35177841947SLeila Ghaffari   // -- Structs
352ccaff030SJeremy L Thompson   ierr = PetscFree(units); CHKERRQ(ierr);
353ccaff030SJeremy L Thompson   ierr = PetscFree(user); CHKERRQ(ierr);
35477841947SLeila Ghaffari   ierr = PetscFree(problem); CHKERRQ(ierr);
35577841947SLeila Ghaffari   ierr = PetscFree(bc); CHKERRQ(ierr);
35677841947SLeila Ghaffari   ierr = PetscFree(phys_ctx); CHKERRQ(ierr);
35777841947SLeila Ghaffari   ierr = PetscFree(app_ctx); CHKERRQ(ierr);
35877841947SLeila Ghaffari   ierr = PetscFree(ceed_data); CHKERRQ(ierr);
35977841947SLeila Ghaffari 
360ccaff030SJeremy L Thompson   return PetscFinalize();
361ccaff030SJeremy L Thompson }
362