1 // Copyright (c) 2017-2022, Lawrence Livermore National Security, LLC and other CEED contributors. 2 // All Rights Reserved. See the top-level LICENSE and NOTICE files for details. 3 // 4 // SPDX-License-Identifier: BSD-2-Clause 5 // 6 // This file is part of CEED: http://github.com/ceed 7 8 // libCEED + PETSc Example: Navier-Stokes 9 // 10 // This example demonstrates a simple usage of libCEED with PETSc to solve a Navier-Stokes problem. 11 // 12 // Build with: 13 // 14 // make [PETSC_DIR=</path/to/petsc>] [CEED_DIR=</path/to/libceed>] navierstokes 15 // 16 // Sample runs: 17 // 18 // ./navierstokes -ceed /cpu/self -problem density_current -degree 1 19 // ./navierstokes -ceed /gpu/cuda -problem advection -degree 1 20 // 21 //TESTARGS(name="Advection, skew") -ceed {ceed_resource} -test_type solver -options_file examples/fluids/advection.yaml -ts_max_steps 0 -wind_type translation -wind_translation -0.5547002,0.83205029,0 -advection_ic_type skew -dm_plex_box_faces 2,1,1 -compare_final_state_atol 1e-10 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-adv-skew.bin 22 //TESTARGS(name="Advection, rotation, cosine") -ceed {ceed_resource} -test_type solver -options_file examples/fluids/advection.yaml -ts_max_steps 0 -advection_ic_type cosine_hill -dm_plex_box_faces 2,1,1 -compare_final_state_atol 1e-10 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-adv-rotation-cosine.bin 23 //TESTARGS(name="Gaussian Wave, using MatShell") -ceed {ceed_resource} -test_type solver -options_file examples/fluids/gaussianwave.yaml -compare_final_state_atol 1e-8 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-gaussianwave-shell.bin -dm_plex_box_faces 2,2,1 -ts_max_steps 5 -degree 3 -amat_type shell -pmat_pbdiagonal -pc_type vpbjacobi 24 //TESTARGS(name="Taylor-Green Vortex IC") -ceed {ceed_resource} -problem taylor_green -test_type solver -dm_plex_dim 3 -dm_plex_box_faces 6,6,6 -ts_max_steps 0 -compare_final_state_atol 1e-12 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-taylor-green-IC.bin 25 //TESTARGS(name="Blasius, SGS DataDriven") -ceed {ceed_resource} -options_file examples/fluids/tests-output/blasius_stgtest.yaml -sgs_model_type data_driven -sgs_model_dd_leakyrelu_alpha 0.3 -sgs_model_dd_parameter_dir examples/fluids/dd_sgs_data -ts_dt 2e-9 -state_var primitive -ksp_rtol 1e-12 -snes_rtol 1e-12 -stg_mean_only -stg_fluctuating_IC -test_type solver -compare_final_state_atol 1e-10 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-blasius-sgs-data-driven.bin 26 //TESTARGS(name="Blasius, Anisotropic Differential Filter") -ceed {ceed_resource} -test_type diff_filter -options_file examples/fluids/tests-output/blasius_test.yaml -compare_final_state_atol 5e-10 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-blasius_diff_filter_aniso_vandriest.bin -diff_filter_monitor -ts_max_steps 0 -state_var primitive -diff_filter_friction_length 1e-5 -diff_filter_wall_damping_function van_driest -diff_filter_ksp_rtol 1e-8 -diff_filter_grid_based_width -diff_filter_width_scaling 1,0.7,1 27 //TESTARGS(name="Blasius, Isotropic Differential Filter") -ceed {ceed_resource} -test_type diff_filter -options_file examples/fluids/tests-output/blasius_test.yaml -compare_final_state_atol 2e-12 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-blasius_diff_filter_iso.bin -diff_filter_monitor -ts_max_steps 0 -diff_filter_width_scaling 4.2e-5,4.2e-5,4.2e-5 -diff_filter_ksp_atol 1e-14 -diff_filter_ksp_rtol 1e-16 28 //TESTARGS(name="Gaussian Wave, with IDL") -ceed {ceed_resource} -test_type solver -options_file examples/fluids/gaussianwave.yaml -compare_final_state_atol 2e-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-gaussianwave-IDL.bin -dm_plex_box_faces 5,5,1 -ts_max_steps 5 -idl_decay_time 2e-3 -idl_length 0.25 -idl_start 0 29 //TESTARGS(name="Spanwise Turbulence Statistics") -ceed {ceed_resource} -test_type turb_spanstats -options_file examples/fluids/tests-output/stats_test.yaml -compare_final_state_atol 1E-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-turb-spanstats-stats.bin 30 //TESTARGS(name="Blasius") -ceed {ceed_resource} -test_type solver -options_file examples/fluids/tests-output/blasius_test.yaml -compare_final_state_atol 2E-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-blasius.bin 31 //TESTARGS(name="Blasius, STG Inflow") -ceed {ceed_resource} -test_type solver -options_file examples/fluids/tests-output/blasius_stgtest.yaml -compare_final_state_atol 2E-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-blasius_STG.bin 32 //TESTARGS(name="Blasius, STG Inflow, Weak Temperature") -ceed {ceed_resource} -test_type solver -options_file examples/fluids/tests-output/blasius_stgtest.yaml -compare_final_state_atol 1E-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-blasius_STG_weakT.bin -weakT 33 //TESTARGS(name="Blasius, Strong STG Inflow") -ceed {ceed_resource} -test_type solver -options_file examples/fluids/tests-output/blasius_stgtest.yaml -compare_final_state_atol 1E-10 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-blasius_STG_strongBC.bin -stg_strong true 34 //TESTARGS(name="Channel") -ceed {ceed_resource} -test_type solver -options_file examples/fluids/channel.yaml -compare_final_state_atol 2e-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-channel.bin -dm_plex_box_faces 5,5,1 -ts_max_steps 5 35 //TESTARGS(name="Channel, Primitive") -ceed {ceed_resource} -test_type solver -options_file examples/fluids/channel.yaml -compare_final_state_atol 2e-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-channel-prim.bin -dm_plex_box_faces 5,5,1 -ts_max_steps 5 -state_var primitive 36 //TESTARGS(name="Density Current, explicit") -ceed {ceed_resource} -test_type solver -degree 3 -q_extra 2 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -bc_slip_x 5,6 -bc_slip_y 3,4 -bc_Slip_z 1,2 -units_kilogram 1e-9 -center 62.5,62.5,187.5 -rc 100. -thetaC -35. -mu 75 -gravity 0,0,-9.81 -ts_dt 1e-3 -units_meter 1e-2 -units_second 1e-2 -ts_max_steps 10 -compare_final_state_atol 1E-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-dc-explicit.bin 37 //TESTARGS(name="Density Current, implicit, no stabilization") -ceed {ceed_resource} -test_type solver -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -bc_slip_x 5,6 -bc_slip_y 3,4 -bc_Slip_z 1,2 -units_kilogram 1e-9 -center 62.5,62.5,187.5 -rc 100. -thetaC -35. -mu 75 -gravity 0,0,-9.81 -units_meter 1e-2 -units_second 1e-2 -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -ts_type alpha -ts_max_steps 10 -compare_final_state_atol 5E-4 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-dc-implicit-stab-none.bin 38 //TESTARGS(name="Advection, rotation, implicit, SUPG stabilization") -ceed {ceed_resource} -test_type solver -problem advection -CtauS .3 -stab supg -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -bc_wall 1,2,3,4,5,6 -wall_comps 4 -units_kilogram 1e-9 -rc 100. -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -dm_mat_preallocate_skip 0 -ts_type alpha -compare_final_state_atol 5E-4 -ts_max_steps 10 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-adv-rotation-implicit-stab-supg.bin 39 //TESTARGS(name="Advection, translation, implicit, SU stabilization") -ceed {ceed_resource} -test_type solver -problem advection -CtauS .3 -stab su -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -units_kilogram 1e-9 -rc 100. -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -dm_mat_preallocate_skip 0 -ts_type alpha -wind_type translation -wind_translation .53,-1.33,-2.65 -bc_inflow 1,2,3,4,5,6 -ts_max_steps 10 -compare_final_state_atol 5E-4 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-adv-translation-implicit-stab-su.bin 40 //TESTARGS(name="Advection 2D, rotation, explicit, strong form") -ceed {ceed_resource} -test_type solver -problem advection2d -strong_form 1 -degree 3 -dm_plex_box_faces 2,2 -dm_plex_box_lower 0,0 -dm_plex_box_upper 125,125 -bc_wall 1,2,3,4 -wall_comps 4 -units_kilogram 1e-9 -rc 100. -ts_dt 1e-3 -compare_final_state_atol 1E-11 -ts_max_steps 10 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-adv2d-rotation-explicit-strong.bin 41 //TESTARGS(name="Advection 2D, rotation, implicit, SUPG stabilization") -ceed {ceed_resource} -test_type solver -problem advection2d -CtauS .3 -stab supg -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0 -dm_plex_box_upper 125,125 -bc_wall 1,2,3,4 -wall_comps 4 -units_kilogram 1e-9 -rc 100. -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -dm_mat_preallocate_skip 0 -ts_type alpha -ts_max_steps 10 -compare_final_state_atol 5E-4 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-adv2d-rotation-implicit-stab-supg.bin 42 //TESTARGS(name="Euler, implicit") -ceed {ceed_resource} -test_type solver -problem euler_vortex -degree 3 -dm_plex_box_faces 1,1,2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -units_meter 1e-4 -units_second 1e-4 -mean_velocity 1.4,-2.,0 -bc_inflow 4,6 -bc_outflow 3,5 -bc_slip_z 1,2 -vortex_strength 2 -ksp_atol 1e-4 -ksp_rtol 1e-3 -ksp_type bcgs -snes_atol 1e-3 -snes_lag_jacobian 100 -snes_lag_jacobian_persists -snes_mf_operator -ts_dt 1e-3 -implicit -dm_mat_preallocate_skip 0 -ts_type alpha -ts_max_steps 10 -compare_final_state_atol 5E-4 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-euler-implicit.bin 43 //TESTARGS(name="Euler, explicit") -ceed {ceed_resource} -test_type solver -problem euler_vortex -degree 3 -q_extra 2 -dm_plex_box_faces 2,2,1 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 125,125,250 -dm_plex_dim 3 -units_meter 1e-4 -units_second 1e-4 -mean_velocity 1.4,-2.,0 -bc_inflow 4,6 -bc_outflow 3,5 -bc_slip_z 1,2 -vortex_strength 2 -ts_dt 1e-7 -ts_rk_type 5bs -ts_rtol 1e-10 -ts_atol 1e-10 -ts_max_steps 10 -compare_final_state_atol 1E-7 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-euler-explicit.bin 44 //TESTARGS(name="Sod Shocktube, explicit, SU stabilization, y-z-beta shock capturing") -ceed {ceed_resource} -test_type solver -problem shocktube -degree 1 -q_extra 2 -dm_plex_box_faces 50,1,1 -units_meter 1e-2 units_second 1e-2 -dm_plex_box_lower 0,0,0 -dm_plex_box_upper 1000,20,20 -dm_plex_dim 3 -bc_slip_x 5,6 -bc_slip_y 3,4 -bc_Slip_z 1,2 -yzb -stab su -ts_max_steps 10 -compare_final_state_atol 1E-11 -compare_final_state_filename examples/fluids/tests-output/fluids-navierstokes-shocktube-explicit-su-yzb.bin 45 46 /// @file 47 /// Navier-Stokes example using PETSc 48 49 const char help[] = "Solve Navier-Stokes using PETSc and libCEED\n"; 50 51 #include "navierstokes.h" 52 #include <petscdevice.h> 53 54 #include <ceed.h> 55 #include <petscdmplex.h> 56 #include <petscts.h> 57 58 int main(int argc, char **argv) { 59 // --------------------------------------------------------------------------- 60 // Initialize PETSc 61 // --------------------------------------------------------------------------- 62 PetscCall(PetscInitialize(&argc, &argv, NULL, help)); 63 64 // --------------------------------------------------------------------------- 65 // Create structs 66 // --------------------------------------------------------------------------- 67 AppCtx app_ctx; 68 PetscCall(PetscCalloc1(1, &app_ctx)); 69 70 ProblemData *problem = NULL; 71 PetscCall(PetscCalloc1(1, &problem)); 72 73 User user; 74 PetscCall(PetscCalloc1(1, &user)); 75 76 CeedData ceed_data; 77 PetscCall(PetscCalloc1(1, &ceed_data)); 78 79 SimpleBC bc; 80 PetscCall(PetscCalloc1(1, &bc)); 81 82 Physics phys_ctx; 83 PetscCall(PetscCalloc1(1, &phys_ctx)); 84 85 Units units; 86 PetscCall(PetscCalloc1(1, &units)); 87 88 user->app_ctx = app_ctx; 89 user->units = units; 90 user->phys = phys_ctx; 91 problem->bc_from_ics = PETSC_TRUE; 92 93 PetscCall(RegisterLogEvents()); 94 95 // --------------------------------------------------------------------------- 96 // Process command line options 97 // --------------------------------------------------------------------------- 98 // -- Register problems to be available on the command line 99 PetscCall(RegisterProblems_NS(app_ctx)); 100 101 // -- Process general command line options 102 MPI_Comm comm = PETSC_COMM_WORLD; 103 user->comm = comm; 104 PetscCall(ProcessCommandLineOptions(comm, app_ctx, bc)); 105 106 // --------------------------------------------------------------------------- 107 // Initialize libCEED 108 // --------------------------------------------------------------------------- 109 // -- Initialize backend 110 Ceed ceed; 111 PetscCheck(CeedInit(app_ctx->ceed_resource, &ceed) == CEED_ERROR_SUCCESS, comm, PETSC_ERR_LIB, "Ceed initialization failed"); 112 user->ceed = ceed; 113 114 PetscCheck(CeedSetErrorHandler(ceed, CeedErrorStore) == CEED_ERROR_SUCCESS, comm, PETSC_ERR_LIB, "Setting libCEED error handler failed"); 115 116 // -- Check preferred MemType 117 CeedMemType mem_type_backend; 118 PetscCallCeed(ceed, CeedGetPreferredMemType(ceed, &mem_type_backend)); 119 120 { 121 const char *resource; 122 PetscCallCeed(ceed, CeedGetResource(ceed, &resource)); 123 if (strstr(resource, "/gpu/sycl")) { 124 PetscDeviceContext dctx; 125 PetscCall(PetscDeviceContextGetCurrentContext(&dctx)); 126 void *stream_handle; 127 PetscCall(PetscDeviceContextGetStreamHandle(dctx, &stream_handle)); 128 PetscCallCeed(ceed, CeedSetStream(ceed, stream_handle)); 129 } 130 } 131 132 // --------------------------------------------------------------------------- 133 // Set up global mesh 134 // --------------------------------------------------------------------------- 135 // -- Create DM 136 DM dm; 137 VecType vec_type = NULL; 138 MatType mat_type = NULL; 139 switch (mem_type_backend) { 140 case CEED_MEM_HOST: 141 vec_type = VECSTANDARD; 142 break; 143 case CEED_MEM_DEVICE: { 144 const char *resolved; 145 PetscCallCeed(ceed, CeedGetResource(ceed, &resolved)); 146 if (strstr(resolved, "/gpu/cuda")) vec_type = VECCUDA; 147 else if (strstr(resolved, "/gpu/hip")) vec_type = VECKOKKOS; 148 else if (strstr(resolved, "/gpu/sycl")) vec_type = VECKOKKOS; 149 else vec_type = VECSTANDARD; 150 } 151 } 152 if (strstr(vec_type, VECCUDA)) mat_type = MATAIJCUSPARSE; 153 else if (strstr(vec_type, VECKOKKOS)) mat_type = MATAIJKOKKOS; 154 else mat_type = MATAIJ; 155 PetscCall(CreateDM(comm, problem, mat_type, vec_type, &dm)); 156 user->dm = dm; 157 PetscCall(DMSetApplicationContext(dm, user)); 158 159 // --------------------------------------------------------------------------- 160 // Choose the problem from the list of registered problems 161 // --------------------------------------------------------------------------- 162 { 163 PetscErrorCode (*p)(ProblemData *, DM, void *, SimpleBC); 164 PetscCall(PetscFunctionListFind(app_ctx->problems, app_ctx->problem_name, &p)); 165 PetscCheck(p, PETSC_COMM_SELF, 1, "Problem '%s' not found", app_ctx->problem_name); 166 PetscCall((*p)(problem, dm, &user, bc)); 167 } 168 169 // -- Set up DM 170 PetscCall(SetUpDM(dm, problem, app_ctx->degree, app_ctx->q_extra, bc, phys_ctx)); 171 172 // -- Refine DM for high-order viz 173 if (app_ctx->viz_refine) PetscCall(VizRefineDM(dm, user, problem, bc, phys_ctx)); 174 175 // --------------------------------------------------------------------------- 176 // Create solution vectors 177 // --------------------------------------------------------------------------- 178 // -- Set up global state vector Q 179 Vec Q; 180 PetscCall(DMCreateGlobalVector(dm, &Q)); 181 PetscCall(VecZeroEntries(Q)); 182 183 // -- Set up local state vectors Q_loc, Q_dot_loc 184 PetscCall(DMCreateLocalVector(dm, &user->Q_loc)); 185 PetscCall(DMCreateLocalVector(dm, &user->Q_dot_loc)); 186 PetscCall(VecZeroEntries(user->Q_dot_loc)); 187 188 // --------------------------------------------------------------------------- 189 // Set up libCEED 190 // --------------------------------------------------------------------------- 191 // -- Set up libCEED objects 192 PetscCall(SetupLibceed(ceed, ceed_data, dm, user, app_ctx, problem, bc)); 193 194 // --------------------------------------------------------------------------- 195 // Set up ICs 196 // --------------------------------------------------------------------------- 197 // -- Fix multiplicity for ICs 198 PetscCall(ICs_FixMultiplicity(dm, ceed_data, user, user->Q_loc, Q, 0.0)); 199 200 // --------------------------------------------------------------------------- 201 // Set up lumped mass matrix 202 // --------------------------------------------------------------------------- 203 // -- Set up global mass vector 204 PetscCall(VecDuplicate(Q, &user->M_inv)); 205 206 // -- Compute lumped mass matrix 207 PetscCall(ComputeLumpedMassMatrix(ceed, dm, ceed_data, user->M_inv)); 208 209 // --------------------------------------------------------------------------- 210 // Record boundary values from initial condition 211 // --------------------------------------------------------------------------- 212 // -- This overrides DMPlexInsertBoundaryValues(). 213 // We use this for the main simulation DM because the reference DMPlexInsertBoundaryValues() is very slow on the GPU due to extra device-to-host 214 // communication. If we disable this, we should still get the same results due to the problem->bc function, but with potentially much slower 215 // execution. 216 if (problem->bc_from_ics) { 217 PetscCall(SetBCsFromICs(dm, Q, user->Q_loc)); 218 } 219 220 // --------------------------------------------------------------------------- 221 // Create output directory 222 // --------------------------------------------------------------------------- 223 PetscMPIInt rank; 224 MPI_Comm_rank(comm, &rank); 225 if (!rank) { 226 PetscCall(PetscMkdir(app_ctx->output_dir)); 227 } 228 229 // --------------------------------------------------------------------------- 230 // Gather initial Q values in case of continuation of simulation 231 // --------------------------------------------------------------------------- 232 // -- Set up initial values from binary file 233 if (app_ctx->cont_steps) { 234 PetscCall(SetupICsFromBinary(comm, app_ctx, Q)); 235 } 236 237 // Print problem summary 238 if (app_ctx->test_type == TESTTYPE_NONE) PetscCall(PrintRunInfo(user, phys_ctx, problem, comm)); 239 240 // -- Zero Q_loc 241 PetscCall(VecZeroEntries(user->Q_loc)); 242 243 // --------------------------------------------------------------------------- 244 // TS: Create, setup, and solve 245 // --------------------------------------------------------------------------- 246 TS ts; 247 PetscScalar final_time; 248 PetscCall(TSSolve_NS(dm, user, app_ctx, phys_ctx, &Q, &final_time, &ts)); 249 250 // --------------------------------------------------------------------------- 251 // Post-processing 252 // --------------------------------------------------------------------------- 253 PetscCall(PostProcess(ts, ceed_data, dm, problem, user, Q, final_time)); 254 255 // --------------------------------------------------------------------------- 256 // Destroy libCEED objects 257 // --------------------------------------------------------------------------- 258 259 PetscCall(TurbulenceStatisticsDestroy(user, ceed_data)); 260 PetscCall(NodalProjectionDataDestroy(user->grad_velo_proj)); 261 PetscCall(SgsDDDataDestroy(user->sgs_dd_data)); 262 PetscCall(DifferentialFilterDataDestroy(user->diff_filter)); 263 PetscCall(SGS_DD_TrainingDataDestroy(user->sgs_dd_train)); 264 PetscCall(SmartSimDataDestroy(user->smartsim)); 265 266 // -- Vectors 267 PetscCallCeed(ceed, CeedVectorDestroy(&ceed_data->x_coord)); 268 PetscCallCeed(ceed, CeedVectorDestroy(&ceed_data->q_data)); 269 PetscCallCeed(ceed, CeedVectorDestroy(&user->q_ceed)); 270 PetscCallCeed(ceed, CeedVectorDestroy(&user->q_dot_ceed)); 271 PetscCallCeed(ceed, CeedVectorDestroy(&user->g_ceed)); 272 PetscCallCeed(ceed, CeedVectorDestroy(&user->coo_values_amat)); 273 PetscCallCeed(ceed, CeedVectorDestroy(&user->coo_values_pmat)); 274 275 // -- Bases 276 PetscCallCeed(ceed, CeedBasisDestroy(&ceed_data->basis_q)); 277 PetscCallCeed(ceed, CeedBasisDestroy(&ceed_data->basis_x)); 278 PetscCallCeed(ceed, CeedBasisDestroy(&ceed_data->basis_xc)); 279 PetscCallCeed(ceed, CeedBasisDestroy(&ceed_data->basis_q_sur)); 280 PetscCallCeed(ceed, CeedBasisDestroy(&ceed_data->basis_x_sur)); 281 282 // -- Restrictions 283 PetscCallCeed(ceed, CeedElemRestrictionDestroy(&ceed_data->elem_restr_q)); 284 PetscCallCeed(ceed, CeedElemRestrictionDestroy(&ceed_data->elem_restr_x)); 285 PetscCallCeed(ceed, CeedElemRestrictionDestroy(&ceed_data->elem_restr_qd_i)); 286 287 // Destroy QFunction contexts after using 288 // ToDo: Simplify tracked libCEED objects, smaller struct 289 { 290 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_inflow_jacobian.qfunction_context)); 291 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_inflow_jacobian.qfunction_context)); 292 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_outflow_jacobian.qfunction_context)); 293 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_outflow_jacobian.qfunction_context)); 294 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_freestream_jacobian.qfunction_context)); 295 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_freestream_jacobian.qfunction_context)); 296 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->setup_sur.qfunction_context)); 297 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->setup_vol.qfunction_context)); 298 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->ics.qfunction_context)); 299 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_vol_rhs.qfunction_context)); 300 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_vol_ifunction.qfunction_context)); 301 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->apply_vol_ijacobian.qfunction_context)); 302 } 303 304 // -- QFunctions 305 PetscCallCeed(ceed, CeedQFunctionDestroy(&ceed_data->qf_setup_vol)); 306 PetscCallCeed(ceed, CeedQFunctionDestroy(&ceed_data->qf_ics)); 307 PetscCallCeed(ceed, CeedQFunctionDestroy(&ceed_data->qf_rhs_vol)); 308 PetscCallCeed(ceed, CeedQFunctionDestroy(&ceed_data->qf_ifunction_vol)); 309 PetscCallCeed(ceed, CeedQFunctionDestroy(&ceed_data->qf_setup_sur)); 310 PetscCallCeed(ceed, CeedQFunctionDestroy(&ceed_data->qf_apply_inflow)); 311 PetscCallCeed(ceed, CeedQFunctionDestroy(&ceed_data->qf_apply_inflow_jacobian)); 312 PetscCallCeed(ceed, CeedQFunctionDestroy(&ceed_data->qf_apply_freestream)); 313 PetscCallCeed(ceed, CeedQFunctionDestroy(&ceed_data->qf_apply_freestream_jacobian)); 314 315 // -- Operators 316 PetscCallCeed(ceed, CeedOperatorDestroy(&ceed_data->op_setup_vol)); 317 PetscCall(OperatorApplyContextDestroy(ceed_data->op_ics_ctx)); 318 PetscCallCeed(ceed, CeedOperatorDestroy(&user->op_rhs_vol)); 319 PetscCallCeed(ceed, CeedOperatorDestroy(&user->op_ifunction_vol)); 320 PetscCall(OperatorApplyContextDestroy(user->op_rhs_ctx)); 321 PetscCallCeed(ceed, CeedOperatorDestroy(&user->op_ifunction)); 322 PetscCallCeed(ceed, CeedOperatorDestroy(&user->op_ijacobian)); 323 324 // -- Ceed 325 PetscCheck(CeedDestroy(&ceed) == CEED_ERROR_SUCCESS, comm, PETSC_ERR_LIB, "Destroying Ceed object failed"); 326 327 if (app_ctx->test_type != TESTTYPE_NONE) { 328 PetscInt num_options_left = 0; 329 PetscCall(PetscOptionsLeftGet(NULL, &num_options_left, NULL, NULL)); 330 PetscCheck(num_options_left == 0, PETSC_COMM_WORLD, -1, 331 "There are unused options. This is not allowed. See error message for the unused options (or use -options_left directly)"); 332 } 333 334 // --------------------------------------------------------------------------- 335 // Clean up PETSc 336 // --------------------------------------------------------------------------- 337 // -- Vectors 338 PetscCall(VecDestroy(&Q)); 339 PetscCall(VecDestroy(&user->M_inv)); 340 PetscCall(VecDestroy(&user->Q_loc)); 341 PetscCall(VecDestroy(&user->Q_dot_loc)); 342 343 // -- Matrices 344 PetscCall(MatDestroy(&user->interp_viz)); 345 346 // -- DM 347 PetscCall(DMDestroy(&dm)); 348 PetscCall(DMDestroy(&user->dm_viz)); 349 350 // -- TS 351 PetscCall(TSDestroy(&ts)); 352 353 // -- Function list 354 PetscCall(PetscFunctionListDestroy(&app_ctx->problems)); 355 356 PetscCall(PetscFree(app_ctx->amat_type)); 357 PetscCall(PetscFree(app_ctx->wall_forces.walls)); 358 PetscCall(PetscViewerDestroy(&app_ctx->wall_forces.viewer)); 359 360 // -- Structs 361 PetscCall(PetscFree(units)); 362 PetscCall(PetscFree(user)); 363 PetscCall(PetscFree(problem)); 364 PetscCall(PetscFree(bc)); 365 PetscCall(PetscFree(phys_ctx)); 366 PetscCall(PetscFree(app_ctx)); 367 PetscCall(PetscFree(ceed_data)); 368 369 return PetscFinalize(); 370 } 371