xref: /libCEED/examples/fluids/navierstokes.h (revision db749d2134fd2d9cb1eaa1ca5892abcc660916ce)
1 // Copyright (c) 2017-2024, Lawrence Livermore National Security, LLC and other CEED contributors.
2 // All Rights Reserved. See the top-level LICENSE and NOTICE files for details.
3 //
4 // SPDX-License-Identifier: BSD-2-Clause
5 //
6 // This file is part of CEED:  http://github.com/ceed
7 #pragma once
8 
9 #include <ceed-utils.h>
10 #include <ceed.h>
11 #include <mat-ceed.h>
12 #include <petscts.h>
13 #include <stdbool.h>
14 
15 #include "./include/petsc_ops.h"
16 #include "qfunctions/newtonian_types.h"
17 #include "qfunctions/stabilization_types.h"
18 
19 #if PETSC_VERSION_LT(3, 21, 0)
20 #error "PETSc v3.21 or later is required"
21 #endif
22 
23 // -----------------------------------------------------------------------------
24 // Enums
25 // -----------------------------------------------------------------------------
26 
27 // Euler - test cases
28 typedef enum {
29   EULER_TEST_ISENTROPIC_VORTEX = 0,
30   EULER_TEST_1                 = 1,
31   EULER_TEST_2                 = 2,
32   EULER_TEST_3                 = 3,
33   EULER_TEST_4                 = 4,
34   EULER_TEST_5                 = 5,
35 } EulerTestType;
36 static const char *const EulerTestTypes[] = {"isentropic_vortex", "test_1",      "test_2", "test_3", "test_4", "test_5",
37                                              "EulerTestType",     "EULER_TEST_", NULL};
38 
39 // Advection - Wind types
40 static const char *const WindTypes[] = {"rotation", "translation", "WindType", "WIND_", NULL};
41 
42 // Advection - Initial Condition Types
43 static const char *const AdvectionICTypes[] = {"sphere", "cylinder", "cosine_hill", "skew", "AdvectionICType", "ADVECTIONIC_", NULL};
44 
45 // Advection - Bubble Continuity Types
46 static const char *const BubbleContinuityTypes[] = {"smooth", "back_sharp", "thick", "cosine", "BubbleContinuityType", "BUBBLE_CONTINUITY_", NULL};
47 
48 // Stabilization methods
49 static const char *const StabilizationTypes[] = {"none", "SU", "SUPG", "StabilizationType", "STAB_", NULL};
50 
51 // Stabilization tau constants
52 static const char *const StabilizationTauTypes[] = {"Ctau", "AdvDiff_Shakib", "AdvDiff_Shakib_P", "StabilizationTauType", "STAB_TAU_", NULL};
53 
54 // Test mode type
55 typedef enum {
56   TESTTYPE_NONE           = 0,
57   TESTTYPE_SOLVER         = 1,
58   TESTTYPE_TURB_SPANSTATS = 2,
59   TESTTYPE_DIFF_FILTER    = 3,
60 } TestType;
61 static const char *const TestTypes[] = {"none", "solver", "turb_spanstats", "diff_filter", "TestType", "TESTTYPE_", NULL};
62 
63 // Subgrid-Stress mode type
64 typedef enum {
65   SGS_MODEL_NONE        = 0,
66   SGS_MODEL_DATA_DRIVEN = 1,
67 } SGSModelType;
68 static const char *const SGSModelTypes[] = {"none", "data_driven", "SGSModelType", "SGS_MODEL_", NULL};
69 
70 // Mesh transformation type
71 typedef enum {
72   MESH_TRANSFORM_NONE      = 0,
73   MESH_TRANSFORM_PLATEMESH = 1,
74 } MeshTransformType;
75 static const char *const MeshTransformTypes[] = {"none", "platemesh", "MeshTransformType", "MESH_TRANSFORM_", NULL};
76 
77 static const char *const DifferentialFilterDampingFunctions[] = {
78     "none", "van_driest", "mms", "DifferentialFilterDampingFunction", "DIFF_FILTER_DAMP_", NULL};
79 
80 // -----------------------------------------------------------------------------
81 // Log Events
82 // -----------------------------------------------------------------------------
83 extern PetscLogEvent FLUIDS_CeedOperatorApply;
84 extern PetscLogEvent FLUIDS_CeedOperatorAssemble;
85 extern PetscLogEvent FLUIDS_CeedOperatorAssembleDiagonal;
86 extern PetscLogEvent FLUIDS_CeedOperatorAssemblePointBlockDiagonal;
87 extern PetscLogEvent FLUIDS_SmartRedis_Init;
88 extern PetscLogEvent FLUIDS_SmartRedis_Meta;
89 extern PetscLogEvent FLUIDS_SmartRedis_Train;
90 extern PetscLogEvent FLUIDS_TrainDataCompute;
91 extern PetscLogEvent FLUIDS_DifferentialFilter;
92 extern PetscLogEvent FLUIDS_VelocityGradientProjection;
93 PetscErrorCode       RegisterLogEvents();
94 
95 // -----------------------------------------------------------------------------
96 // Structs
97 // -----------------------------------------------------------------------------
98 // Structs declarations
99 typedef struct AppCtx_private   *AppCtx;
100 typedef struct CeedData_private *CeedData;
101 typedef struct User_private     *User;
102 typedef struct Units_private    *Units;
103 typedef struct SimpleBC_private *SimpleBC;
104 typedef struct Physics_private  *Physics;
105 
106 // Application context from user command line options
107 struct AppCtx_private {
108   // libCEED arguments
109   char     ceed_resource[PETSC_MAX_PATH_LEN];  // libCEED backend
110   PetscInt degree;
111   PetscInt q_extra;
112   // Solver arguments
113   MatType amat_type;
114   // Post-processing arguments
115   PetscInt  checkpoint_interval;
116   PetscInt  viz_refine;
117   PetscInt  cont_steps;
118   PetscReal cont_time;
119   char      cont_file[PETSC_MAX_PATH_LEN];
120   char      cont_time_file[PETSC_MAX_PATH_LEN];
121   char      output_dir[PETSC_MAX_PATH_LEN];
122   PetscBool add_stepnum2bin;
123   PetscBool checkpoint_vtk;
124   // Problem type arguments
125   PetscFunctionList problems;
126   char              problem_name[PETSC_MAX_PATH_LEN];
127   // Test mode arguments
128   TestType    test_type;
129   PetscScalar test_tol;
130   char        test_file_path[PETSC_MAX_PATH_LEN];
131   // Turbulent spanwise statistics
132   PetscBool         turb_spanstats_enable;
133   PetscInt          turb_spanstats_collect_interval;
134   PetscInt          turb_spanstats_viewer_interval;
135   PetscViewer       turb_spanstats_viewer;
136   PetscViewerFormat turb_spanstats_viewer_format;
137   // Wall forces
138   struct {
139     PetscInt          num_wall;
140     PetscInt         *walls;
141     PetscViewer       viewer;
142     PetscViewerFormat viewer_format;
143     PetscBool         header_written;
144   } wall_forces;
145   // Subgrid Stress Model
146   SGSModelType sgs_model_type;
147   PetscBool    sgs_train_enable;
148   // Differential Filtering
149   PetscBool         diff_filter_monitor;
150   MeshTransformType mesh_transform_type;
151 };
152 
153 // libCEED data struct
154 struct CeedData_private {
155   CeedVector           x_coord, q_data;
156   CeedBasis            basis_x, basis_xc, basis_q, basis_x_sur, basis_q_sur;
157   CeedElemRestriction  elem_restr_x, elem_restr_q, elem_restr_qd_i;
158   CeedOperator         op_setup_vol;
159   OperatorApplyContext op_ics_ctx;
160   CeedQFunction        qf_setup_vol, qf_ics, qf_rhs_vol, qf_ifunction_vol, qf_setup_sur, qf_apply_inflow, qf_apply_inflow_jacobian, qf_apply_outflow,
161       qf_apply_outflow_jacobian, qf_apply_freestream, qf_apply_freestream_jacobian, qf_apply_slip, qf_apply_slip_jacobian;
162 };
163 
164 typedef struct {
165   DM                    dm;
166   PetscSF               sf;  // For communicating child data to parents
167   OperatorApplyContext  op_stats_collect_ctx, op_proj_rhs_ctx;
168   PetscInt              num_comp_stats;
169   Vec                   Child_Stats_loc, Parent_Stats_loc;
170   KSP                   ksp;         // For the L^2 projection solve
171   CeedScalar            span_width;  // spanwise width of the child domain
172   PetscBool             do_mms_test;
173   OperatorApplyContext  mms_error_ctx;
174   CeedContextFieldLabel solution_time_label, previous_time_label;
175 } SpanStatsData;
176 
177 typedef struct {
178   DM                   dm;
179   PetscInt             num_comp;
180   OperatorApplyContext l2_rhs_ctx;
181   KSP                  ksp;
182 } *NodalProjectionData;
183 
184 typedef PetscErrorCode (*SgsDDNodalStressEval)(User user, Vec Q_loc, Vec VelocityGradient, Vec SGSNodal_loc);
185 typedef PetscErrorCode (*SgsDDNodalStressInference)(Vec DD_Inputs_loc, Vec DD_Outputs_loc, void *ctx);
186 typedef struct {
187   DM                        dm_sgs, dm_dd_inputs, dm_dd_outputs;
188   PetscInt                  num_comp_sgs, num_comp_inputs, num_comp_outputs;
189   OperatorApplyContext      op_nodal_evaluation_ctx, op_nodal_dd_inputs_ctx, op_nodal_dd_outputs_ctx, op_sgs_apply_ctx;
190   CeedVector                sgs_nodal_ceed, grad_velo_ceed;
191   SgsDDNodalStressEval      sgs_nodal_eval;
192   SgsDDNodalStressInference sgs_nodal_inference;
193   void                     *sgs_nodal_inference_ctx;
194   PetscErrorCode (*sgs_nodal_inference_ctx_destroy)(void *ctx);
195 } *SgsDDData;
196 
197 typedef struct {
198   DM                   dm_dd_training;
199   PetscInt             num_comp_dd_inputs, write_data_interval, num_filter_widths;
200   PetscScalar          filter_widths[16];
201   OperatorApplyContext op_training_data_calc_ctx;
202   NodalProjectionData  filtered_grad_velo_proj;
203   size_t               training_data_array_dims[2];
204   PetscBool            overwrite_training_data;
205 } *SGS_DD_TrainingData;
206 
207 typedef struct {
208   DM                    dm_filter;
209   PetscInt              num_filtered_fields;
210   CeedInt              *num_field_components;
211   PetscInt              field_prim_state, field_velo_prod;
212   OperatorApplyContext  op_rhs_ctx;
213   KSP                   ksp;
214   PetscObjectState      X_loc_state;
215   PetscBool             do_mms_test;
216   CeedContextFieldLabel filter_width_scaling_label;
217 } *DiffFilterData;
218 
219 typedef struct {
220   void    *client;
221   char     rank_id_name[16];
222   PetscInt collocated_database_num_ranks;
223 } *SmartSimData;
224 
225 // PETSc user data
226 struct User_private {
227   MPI_Comm             comm;
228   DM                   dm;
229   DM                   dm_viz;
230   Mat                  interp_viz;
231   Ceed                 ceed;
232   Units                units;
233   Vec                  Q_loc, Q_dot_loc;
234   Physics              phys;
235   AppCtx               app_ctx;
236   CeedVector           q_ceed, q_dot_ceed, g_ceed, x_ceed;
237   CeedOperator         op_rhs_vol, op_ifunction_vol, op_ifunction;
238   Mat                  mat_ijacobian;
239   KSP                  mass_ksp;
240   OperatorApplyContext op_rhs_ctx, op_strong_bc_ctx;
241   CeedScalar           time_bc_set;
242   SpanStatsData        spanstats;
243   NodalProjectionData  grad_velo_proj;
244   SgsDDData            sgs_dd_data;
245   DiffFilterData       diff_filter;
246   SmartSimData         smartsim;
247   SGS_DD_TrainingData  sgs_dd_train;
248 };
249 
250 // Units
251 struct Units_private {
252   // fundamental units
253   PetscScalar meter;
254   PetscScalar kilogram;
255   PetscScalar second;
256   PetscScalar Kelvin;
257   // derived units
258   PetscScalar Pascal;
259   PetscScalar J_per_kg_K;
260   PetscScalar m_per_squared_s;
261   PetscScalar W_per_m_K;
262   PetscScalar Joule;
263 };
264 
265 // Boundary conditions
266 struct SimpleBC_private {
267   PetscInt num_wall,  // Number of faces with wall BCs
268       wall_comps[5],  // An array of constrained component numbers
269       num_comps,
270       num_symmetry[3],  // Number of faces with symmetry BCs
271       num_inflow, num_outflow, num_freestream, num_slip;
272   PetscInt walls[16], symmetries[3][16], inflows[16], outflows[16], freestreams[16], slips[16];
273 };
274 
275 // Struct that contains all enums and structs used for the physics of all problems
276 struct Physics_private {
277   PetscBool             implicit;
278   StateVariable         state_var;
279   CeedContextFieldLabel solution_time_label;
280   CeedContextFieldLabel stg_solution_time_label;
281   CeedContextFieldLabel timestep_size_label;
282   CeedContextFieldLabel ics_time_label;
283   CeedContextFieldLabel ijacobian_time_shift_label;
284 };
285 
286 typedef struct {
287   CeedQFunctionUser    qfunction;
288   const char          *qfunction_loc;
289   CeedQFunctionContext qfunction_context;
290 } ProblemQFunctionSpec;
291 
292 // Problem specific data
293 typedef struct ProblemData_private ProblemData;
294 struct ProblemData_private {
295   CeedInt              dim, q_data_size_vol, q_data_size_sur, jac_data_size_sur;
296   CeedScalar           dm_scale;
297   ProblemQFunctionSpec setup_vol, setup_sur, ics, apply_vol_rhs, apply_vol_ifunction, apply_vol_ijacobian, apply_inflow, apply_outflow,
298       apply_freestream, apply_slip, apply_inflow_jacobian, apply_outflow_jacobian, apply_freestream_jacobian, apply_slip_jacobian;
299   bool      non_zero_time;
300   PetscBool bc_from_ics, use_strong_bc_ceed, uses_newtonian;
301   PetscErrorCode (*print_info)(User, ProblemData *, AppCtx);
302   PetscErrorCode (*create_mass_operator)(User, CeedOperator *);
303 };
304 
305 extern int FreeContextPetsc(void *);
306 
307 // -----------------------------------------------------------------------------
308 // Set up problems
309 // -----------------------------------------------------------------------------
310 // Set up function for each problem
311 extern PetscErrorCode NS_TAYLOR_GREEN(ProblemData *problem, DM dm, void *ctx, SimpleBC bc);
312 extern PetscErrorCode NS_GAUSSIAN_WAVE(ProblemData *problem, DM dm, void *ctx, SimpleBC bc);
313 extern PetscErrorCode NS_CHANNEL(ProblemData *problem, DM dm, void *ctx, SimpleBC bc);
314 extern PetscErrorCode NS_BLASIUS(ProblemData *problem, DM dm, void *ctx, SimpleBC bc);
315 extern PetscErrorCode NS_NEWTONIAN_IG(ProblemData *problem, DM dm, void *ctx, SimpleBC bc);
316 extern PetscErrorCode NS_DENSITY_CURRENT(ProblemData *problem, DM dm, void *ctx, SimpleBC bc);
317 extern PetscErrorCode NS_EULER_VORTEX(ProblemData *problem, DM dm, void *ctx, SimpleBC bc);
318 extern PetscErrorCode NS_SHOCKTUBE(ProblemData *problem, DM dm, void *ctx, SimpleBC bc);
319 extern PetscErrorCode NS_ADVECTION(ProblemData *problem, DM dm, void *ctx, SimpleBC bc);
320 extern PetscErrorCode NS_ADVECTION2D(ProblemData *problem, DM dm, void *ctx, SimpleBC bc);
321 
322 // Print function for each problem
323 extern PetscErrorCode PRINT_NEWTONIAN(User user, ProblemData *problem, AppCtx app_ctx);
324 
325 extern PetscErrorCode PRINT_EULER_VORTEX(User user, ProblemData *problem, AppCtx app_ctx);
326 
327 extern PetscErrorCode PRINT_SHOCKTUBE(User user, ProblemData *problem, AppCtx app_ctx);
328 
329 extern PetscErrorCode PRINT_ADVECTION(User user, ProblemData *problem, AppCtx app_ctx);
330 
331 extern PetscErrorCode PRINT_ADVECTION2D(User user, ProblemData *problem, AppCtx app_ctx);
332 
333 PetscErrorCode PrintRunInfo(User user, Physics phys_ctx, ProblemData *problem, MPI_Comm comm);
334 
335 // -----------------------------------------------------------------------------
336 // libCEED functions
337 // -----------------------------------------------------------------------------
338 // Utility function to create local CEED restriction
339 PetscErrorCode CreateRestrictionFromPlex(Ceed ceed, DM dm, CeedInt height, DMLabel domain_label, CeedInt label_value, PetscInt dm_field,
340                                          CeedElemRestriction *elem_restr);
341 
342 PetscErrorCode DMPlexCeedElemRestrictionCreate(Ceed ceed, DM dm, DMLabel domain_label, PetscInt label_value, PetscInt height, PetscInt dm_field,
343                                                CeedElemRestriction *restriction);
344 PetscErrorCode DMPlexCeedElemRestrictionCoordinateCreate(Ceed ceed, DM dm, DMLabel domain_label, PetscInt label_value, PetscInt height,
345                                                          CeedElemRestriction *restriction);
346 PetscErrorCode DMPlexCeedElemRestrictionQDataCreate(Ceed ceed, DM dm, DMLabel domain_label, PetscInt label_value, PetscInt height,
347                                                     PetscInt q_data_size, CeedElemRestriction *restriction);
348 PetscErrorCode DMPlexCeedElemRestrictionCollocatedCreate(Ceed ceed, DM dm, DMLabel domain_label, PetscInt label_value, PetscInt height,
349                                                          PetscInt q_data_size, CeedElemRestriction *restriction);
350 
351 PetscErrorCode CreateBasisFromPlex(Ceed ceed, DM dm, DMLabel domain_label, CeedInt label_value, CeedInt height, CeedInt dm_field, CeedBasis *basis);
352 
353 // Utility function to create CEED Composite Operator for the entire domain
354 PetscErrorCode CreateOperatorForDomain(Ceed ceed, DM dm, SimpleBC bc, CeedData ceed_data, Physics phys, CeedOperator op_apply_vol,
355                                        CeedOperator op_apply_ijacobian_vol, CeedInt height, CeedInt P_sur, CeedInt Q_sur, CeedInt q_data_size_sur,
356                                        CeedInt jac_data_size_sur, CeedOperator *op_apply, CeedOperator *op_apply_ijacobian);
357 
358 PetscErrorCode SetupLibceed(Ceed ceed, CeedData ceed_data, DM dm, User user, AppCtx app_ctx, ProblemData *problem, SimpleBC bc);
359 
360 // -----------------------------------------------------------------------------
361 // Time-stepping functions
362 // -----------------------------------------------------------------------------
363 // RHS (Explicit time-stepper) function setup
364 PetscErrorCode RHS_NS(TS ts, PetscReal t, Vec Q, Vec G, void *user_data);
365 
366 // Implicit time-stepper function setup
367 PetscErrorCode IFunction_NS(TS ts, PetscReal t, Vec Q, Vec Q_dot, Vec G, void *user_data);
368 
369 // User provided TS Monitor
370 PetscErrorCode TSMonitor_NS(TS ts, PetscInt step_no, PetscReal time, Vec Q, void *ctx);
371 
372 // TS: Create, setup, and solve
373 PetscErrorCode TSSolve_NS(DM dm, User user, AppCtx app_ctx, Physics phys, Vec *Q, PetscScalar *f_time, TS *ts);
374 
375 // Update Boundary Values when time has changed
376 PetscErrorCode UpdateBoundaryValues(User user, Vec Q_loc, PetscReal t);
377 
378 // -----------------------------------------------------------------------------
379 // Setup DM
380 // -----------------------------------------------------------------------------
381 // Create mesh
382 PetscErrorCode CreateDM(MPI_Comm comm, ProblemData *problem, MatType, VecType, DM *dm);
383 
384 // Set up DM
385 PetscErrorCode SetUpDM(DM dm, ProblemData *problem, PetscInt degree, PetscInt q_extra, SimpleBC bc, Physics phys);
386 PetscErrorCode DMSetupByOrderBegin_FEM(PetscBool setup_faces, PetscBool setup_coords, PetscInt degree, PetscInt coord_order, PetscInt q_extra,
387                                        PetscInt num_fields, const PetscInt *field_sizes, DM dm);
388 PetscErrorCode DMSetupByOrderEnd_FEM(PetscBool setup_coords, DM dm);
389 PetscErrorCode DMSetupByOrder_FEM(PetscBool setup_faces, PetscBool setup_coords, PetscInt degree, PetscInt coord_order, PetscInt q_extra,
390                                   PetscInt num_fields, const PetscInt *field_sizes, DM dm);
391 
392 // Refine DM for high-order viz
393 PetscErrorCode VizRefineDM(DM dm, User user, ProblemData *problem, SimpleBC bc, Physics phys);
394 
395 // -----------------------------------------------------------------------------
396 // Process command line options
397 // -----------------------------------------------------------------------------
398 // Register problems to be available on the command line
399 PetscErrorCode RegisterProblems_NS(AppCtx app_ctx);
400 
401 // Process general command line options
402 PetscErrorCode ProcessCommandLineOptions(MPI_Comm comm, AppCtx app_ctx, SimpleBC bc);
403 
404 // -----------------------------------------------------------------------------
405 // Miscellaneous utility functions
406 // -----------------------------------------------------------------------------
407 PetscErrorCode GetInverseMultiplicity(Ceed ceed, DM dm, DMLabel domain_label, PetscInt label_value, PetscInt height, PetscInt dm_field,
408                                       PetscBool get_global_multiplicity, CeedElemRestriction *elem_restr_inv_multiplicity,
409                                       CeedVector *inv_multiplicity);
410 PetscErrorCode ICs_FixMultiplicity(DM dm, CeedData ceed_data, User user, Vec Q_loc, Vec Q, CeedScalar time);
411 
412 PetscErrorCode DMPlexInsertBoundaryValues_FromICs(DM dm, PetscBool insert_essential, Vec Q_loc, PetscReal time, Vec face_geom_FVM, Vec cell_geom_FVM,
413                                                   Vec grad_FVM);
414 
415 // Compare reference solution values with current test run for CI
416 PetscErrorCode RegressionTest(AppCtx app_ctx, Vec Q);
417 
418 // Get error for problems with exact solutions
419 PetscErrorCode PrintError(CeedData ceed_data, DM dm, User user, Vec Q, PetscScalar final_time);
420 
421 // Post-processing
422 PetscErrorCode PostProcess(TS ts, CeedData ceed_data, DM dm, ProblemData *problem, User user, Vec Q, PetscScalar final_time);
423 
424 // -- Gather initial Q values in case of continuation of simulation
425 PetscErrorCode SetupICsFromBinary(MPI_Comm comm, AppCtx app_ctx, Vec Q);
426 
427 // Record boundary values from initial condition
428 PetscErrorCode SetBCsFromICs(DM dm, Vec Q, Vec Q_loc);
429 
430 // Versioning token for binary checkpoints
431 extern const PetscInt32 FLUIDS_FILE_TOKEN;  // for backwards compatibility
432 extern const PetscInt32 FLUIDS_FILE_TOKEN_32;
433 extern const PetscInt32 FLUIDS_FILE_TOKEN_64;
434 
435 // Create appropriate mass qfunction based on number of components N
436 PetscErrorCode CreateMassQFunction(Ceed ceed, CeedInt N, CeedInt q_data_size, CeedQFunction *qf);
437 
438 PetscErrorCode NodalProjectionDataDestroy(NodalProjectionData context);
439 
440 PetscErrorCode PhastaDatFileOpen(const MPI_Comm comm, const char path[PETSC_MAX_PATH_LEN], const PetscInt char_array_len, PetscInt dims[2],
441                                  FILE **fp);
442 
443 PetscErrorCode PhastaDatFileGetNRows(const MPI_Comm comm, const char path[PETSC_MAX_PATH_LEN], PetscInt *nrows);
444 
445 PetscErrorCode PhastaDatFileReadToArrayReal(const MPI_Comm comm, const char path[PETSC_MAX_PATH_LEN], PetscReal array[]);
446 
447 // -----------------------------------------------------------------------------
448 // Turbulence Statistics Collection Functions
449 // -----------------------------------------------------------------------------
450 
451 PetscErrorCode TurbulenceStatisticsSetup(Ceed ceed, User user, CeedData ceed_data, ProblemData *problem);
452 PetscErrorCode TSMonitor_TurbulenceStatistics(TS ts, PetscInt steps, PetscReal solution_time, Vec Q, void *ctx);
453 PetscErrorCode TurbulenceStatisticsDestroy(User user, CeedData ceed_data);
454 
455 // -----------------------------------------------------------------------------
456 // Data-Driven Subgrid Stress (DD-SGS) Modeling Functions
457 // -----------------------------------------------------------------------------
458 
459 PetscErrorCode SgsDDSetup(Ceed ceed, User user, CeedData ceed_data, ProblemData *problem);
460 PetscErrorCode SgsDDDataDestroy(SgsDDData sgs_dd_data);
461 PetscErrorCode SgsDDApplyIFunction(User user, const Vec Q_loc, Vec G_loc);
462 PetscErrorCode VelocityGradientProjectionSetup(Ceed ceed, User user, CeedData ceed_data, ProblemData *problem, StateVariable state_var_input,
463                                                CeedElemRestriction elem_restr_input, CeedBasis basis_input, NodalProjectionData *pgrad_velo_proj);
464 PetscErrorCode VelocityGradientProjectionApply(NodalProjectionData grad_velo_proj, Vec Q_loc, Vec VelocityGradient);
465 PetscErrorCode GridAnisotropyTensorProjectionSetupApply(Ceed ceed, User user, CeedData ceed_data, CeedElemRestriction *elem_restr_grid_aniso,
466                                                         CeedVector *grid_aniso_vector);
467 PetscErrorCode GridAnisotropyTensorCalculateCollocatedVector(Ceed ceed, User user, CeedData ceed_data, CeedElemRestriction *elem_restr_grid_aniso,
468                                                              CeedVector *aniso_colloc_ceed, PetscInt *num_comp_aniso);
469 
470 // -----------------------------------------------------------------------------
471 // Boundary Condition Related Functions
472 // -----------------------------------------------------------------------------
473 
474 // Setup StrongBCs that use QFunctions
475 PetscErrorCode SetupStrongBC_Ceed(Ceed ceed, CeedData ceed_data, DM dm, User user, ProblemData *problem, SimpleBC bc);
476 
477 PetscErrorCode FreestreamBCSetup(ProblemData *problem, DM dm, void *ctx, NewtonianIdealGasContext newtonian_ig_ctx, const StatePrimitive *reference);
478 PetscErrorCode OutflowBCSetup(ProblemData *problem, DM dm, void *ctx, NewtonianIdealGasContext newtonian_ig_ctx, const StatePrimitive *reference);
479 PetscErrorCode SlipBCSetup(ProblemData *problem, DM dm, void *ctx, CeedQFunctionContext newtonian_ig_qfctx);
480 
481 // -----------------------------------------------------------------------------
482 // Differential Filtering Functions
483 // -----------------------------------------------------------------------------
484 
485 PetscErrorCode DifferentialFilterSetup(Ceed ceed, User user, CeedData ceed_data, ProblemData *problem);
486 PetscErrorCode DifferentialFilterDataDestroy(DiffFilterData diff_filter);
487 PetscErrorCode TSMonitor_DifferentialFilter(TS ts, PetscInt steps, PetscReal solution_time, Vec Q, void *ctx);
488 PetscErrorCode DifferentialFilterApply(User user, const PetscReal solution_time, const Vec Q, Vec Filtered_Solution);
489 PetscErrorCode DifferentialFilterMmsICSetup(ProblemData *problem);
490 
491 // -----------------------------------------------------------------------------
492 // SGS Data-Driven Training via SmartSim
493 // -----------------------------------------------------------------------------
494 PetscErrorCode SmartSimSetup(User user);
495 PetscErrorCode SmartSimDataDestroy(SmartSimData smartsim);
496 PetscErrorCode SGS_DD_TrainingSetup(Ceed ceed, User user, CeedData ceed_data, ProblemData *problem);
497 PetscErrorCode TSMonitor_SGS_DD_Training(TS ts, PetscInt step_num, PetscReal solution_time, Vec Q, void *ctx);
498 PetscErrorCode TSPostStep_SGS_DD_Training(TS ts);
499 PetscErrorCode SGS_DD_TrainingDataDestroy(SGS_DD_TrainingData sgs_dd_train);
500