13d8e8822SJeremy L Thompson // Copyright (c) 2017-2022, Lawrence Livermore National Security, LLC and other CEED contributors. 23d8e8822SJeremy L Thompson // All Rights Reserved. See the top-level LICENSE and NOTICE files for details. 377841947SLeila Ghaffari // 43d8e8822SJeremy L Thompson // SPDX-License-Identifier: BSD-2-Clause 577841947SLeila Ghaffari // 63d8e8822SJeremy L Thompson // This file is part of CEED: http://github.com/ceed 777841947SLeila Ghaffari 877841947SLeila Ghaffari /// @file 977841947SLeila Ghaffari /// Utility functions for setting up ADVECTION 1077841947SLeila Ghaffari 1177841947SLeila Ghaffari #include "../navierstokes.h" 1277841947SLeila Ghaffari #include "../qfunctions/setupgeo.h" 1377841947SLeila Ghaffari #include "../qfunctions/advection.h" 1477841947SLeila Ghaffari 156ef2784eSLeila Ghaffari PetscErrorCode NS_ADVECTION(ProblemData *problem, DM dm, void *ctx) { 1677841947SLeila Ghaffari WindType wind_type; 1777841947SLeila Ghaffari BubbleType bubble_type; 1877841947SLeila Ghaffari BubbleContinuityType bubble_continuity_type; 1977841947SLeila Ghaffari StabilizationType stab; 20a0add3c9SJed Brown SetupContext setup_context; 2177841947SLeila Ghaffari User user = *(User *)ctx; 2277841947SLeila Ghaffari MPI_Comm comm = PETSC_COMM_WORLD; 2377841947SLeila Ghaffari PetscBool implicit; 2477841947SLeila Ghaffari PetscBool has_curr_time = PETSC_FALSE; 2577841947SLeila Ghaffari PetscInt ierr; 26841e4c73SJed Brown AdvectionContext advection_ctx; 27841e4c73SJed Brown CeedQFunctionContext advection_context; 2877841947SLeila Ghaffari 29841e4c73SJed Brown PetscFunctionBeginUser; 30a0add3c9SJed Brown ierr = PetscCalloc1(1, &setup_context); CHKERRQ(ierr); 31841e4c73SJed Brown ierr = PetscCalloc1(1, &advection_ctx); CHKERRQ(ierr); 3277841947SLeila Ghaffari 3377841947SLeila Ghaffari // ------------------------------------------------------ 3477841947SLeila Ghaffari // SET UP ADVECTION 3577841947SLeila Ghaffari // ------------------------------------------------------ 3677841947SLeila Ghaffari problem->dim = 3; 3777841947SLeila Ghaffari problem->q_data_size_vol = 10; 38ba6664aeSJames Wright problem->q_data_size_sur = 10; 3991e5af17SJed Brown problem->setup_vol.qfunction = Setup; 4091e5af17SJed Brown problem->setup_vol.qfunction_loc = Setup_loc; 4191e5af17SJed Brown problem->setup_sur.qfunction = SetupBoundary; 4291e5af17SJed Brown problem->setup_sur.qfunction_loc = SetupBoundary_loc; 4391e5af17SJed Brown problem->ics.qfunction = ICsAdvection; 4491e5af17SJed Brown problem->ics.qfunction_loc = ICsAdvection_loc; 4591e5af17SJed Brown problem->apply_vol_rhs.qfunction = Advection; 4691e5af17SJed Brown problem->apply_vol_rhs.qfunction_loc = Advection_loc; 4791e5af17SJed Brown problem->apply_vol_ifunction.qfunction = IFunction_Advection; 4891e5af17SJed Brown problem->apply_vol_ifunction.qfunction_loc = IFunction_Advection_loc; 4991e5af17SJed Brown problem->apply_inflow.qfunction = Advection_InOutFlow; 5091e5af17SJed Brown problem->apply_inflow.qfunction_loc = Advection_InOutFlow_loc; 5177841947SLeila Ghaffari problem->bc = Exact_Advection; 52a0add3c9SJed Brown problem->bc_ctx = setup_context; 5377841947SLeila Ghaffari problem->non_zero_time = PETSC_FALSE; 5477841947SLeila Ghaffari problem->print_info = PRINT_ADVECTION; 5577841947SLeila Ghaffari 5677841947SLeila Ghaffari // ------------------------------------------------------ 5777841947SLeila Ghaffari // Create the libCEED context 5877841947SLeila Ghaffari // ------------------------------------------------------ 5977841947SLeila Ghaffari CeedScalar rc = 1000.; // m (Radius of bubble) 6077841947SLeila Ghaffari CeedScalar CtauS = 0.; // dimensionless 6177841947SLeila Ghaffari CeedScalar strong_form = 0.; // [0,1] 6277841947SLeila Ghaffari CeedScalar E_wind = 1.e6; // J 6377841947SLeila Ghaffari PetscReal wind[3] = {1., 0, 0}; // m/s 641864f1c2SLeila Ghaffari PetscReal domain_min[3], domain_max[3], domain_size[3]; 651864f1c2SLeila Ghaffari ierr = DMGetBoundingBox(dm, domain_min, domain_max); CHKERRQ(ierr); 66ba6664aeSJames Wright for (PetscInt i=0; i<3; i++) domain_size[i] = domain_max[i] - domain_min[i]; 671864f1c2SLeila Ghaffari 6877841947SLeila Ghaffari 6977841947SLeila Ghaffari // ------------------------------------------------------ 7077841947SLeila Ghaffari // Create the PETSc context 7177841947SLeila Ghaffari // ------------------------------------------------------ 7277841947SLeila Ghaffari PetscScalar meter = 1e-2; // 1 meter in scaled length units 7377841947SLeila Ghaffari PetscScalar kilogram = 1e-6; // 1 kilogram in scaled mass units 7477841947SLeila Ghaffari PetscScalar second = 1e-2; // 1 second in scaled time units 7577841947SLeila Ghaffari PetscScalar Joule; 7677841947SLeila Ghaffari 7777841947SLeila Ghaffari // ------------------------------------------------------ 7877841947SLeila Ghaffari // Command line Options 7977841947SLeila Ghaffari // ------------------------------------------------------ 8067490bc6SJeremy L Thompson PetscOptionsBegin(comm, NULL, "Options for ADVECTION problem", NULL); 8177841947SLeila Ghaffari // -- Physics 8277841947SLeila Ghaffari ierr = PetscOptionsScalar("-rc", "Characteristic radius of thermal bubble", 8377841947SLeila Ghaffari NULL, rc, &rc, NULL); CHKERRQ(ierr); 8477841947SLeila Ghaffari PetscBool translation; 8577841947SLeila Ghaffari ierr = PetscOptionsEnum("-wind_type", "Wind type in Advection", 8677841947SLeila Ghaffari NULL, WindTypes, 8777841947SLeila Ghaffari (PetscEnum)(wind_type = WIND_ROTATION), 8877841947SLeila Ghaffari (PetscEnum *)&wind_type, &translation); CHKERRQ(ierr); 8977841947SLeila Ghaffari if (translation) user->phys->has_neumann = PETSC_TRUE; 9077841947SLeila Ghaffari PetscInt n = problem->dim; 9177841947SLeila Ghaffari PetscBool user_wind; 9277841947SLeila Ghaffari ierr = PetscOptionsRealArray("-wind_translation", "Constant wind vector", 9377841947SLeila Ghaffari NULL, wind, &n, &user_wind); CHKERRQ(ierr); 9477841947SLeila Ghaffari ierr = PetscOptionsScalar("-CtauS", 9577841947SLeila Ghaffari "Scale coefficient for tau (nondimensional)", 9677841947SLeila Ghaffari NULL, CtauS, &CtauS, NULL); CHKERRQ(ierr); 9777841947SLeila Ghaffari ierr = PetscOptionsScalar("-strong_form", 9877841947SLeila Ghaffari "Strong (1) or weak/integrated by parts (0) advection residual", 9977841947SLeila Ghaffari NULL, strong_form, &strong_form, NULL); CHKERRQ(ierr); 10077841947SLeila Ghaffari ierr = PetscOptionsScalar("-E_wind", "Total energy of inflow wind", 10177841947SLeila Ghaffari NULL, E_wind, &E_wind, NULL); CHKERRQ(ierr); 10277841947SLeila Ghaffari ierr = PetscOptionsEnum("-bubble_type", "Sphere (3D) or cylinder (2D)", 10377841947SLeila Ghaffari NULL, BubbleTypes, 10477841947SLeila Ghaffari (PetscEnum)(bubble_type = BUBBLE_SPHERE), 10577841947SLeila Ghaffari (PetscEnum *)&bubble_type, NULL); CHKERRQ(ierr); 10677841947SLeila Ghaffari ierr = PetscOptionsEnum("-bubble_continuity", "Smooth, back_sharp, or thick", 10777841947SLeila Ghaffari NULL, BubbleContinuityTypes, 10877841947SLeila Ghaffari (PetscEnum)(bubble_continuity_type = BUBBLE_CONTINUITY_SMOOTH), 10977841947SLeila Ghaffari (PetscEnum *)&bubble_continuity_type, NULL); CHKERRQ(ierr); 11077841947SLeila Ghaffari ierr = PetscOptionsEnum("-stab", "Stabilization method", NULL, 11177841947SLeila Ghaffari StabilizationTypes, (PetscEnum)(stab = STAB_NONE), 11277841947SLeila Ghaffari (PetscEnum *)&stab, NULL); CHKERRQ(ierr); 11377841947SLeila Ghaffari ierr = PetscOptionsBool("-implicit", "Use implicit (IFunction) formulation", 11477841947SLeila Ghaffari NULL, implicit=PETSC_FALSE, &implicit, NULL); 11577841947SLeila Ghaffari CHKERRQ(ierr); 11677841947SLeila Ghaffari 11777841947SLeila Ghaffari // -- Units 11877841947SLeila Ghaffari ierr = PetscOptionsScalar("-units_meter", "1 meter in scaled length units", 11977841947SLeila Ghaffari NULL, meter, &meter, NULL); CHKERRQ(ierr); 12077841947SLeila Ghaffari meter = fabs(meter); 12177841947SLeila Ghaffari ierr = PetscOptionsScalar("-units_kilogram","1 kilogram in scaled mass units", 12277841947SLeila Ghaffari NULL, kilogram, &kilogram, NULL); CHKERRQ(ierr); 12377841947SLeila Ghaffari kilogram = fabs(kilogram); 12477841947SLeila Ghaffari ierr = PetscOptionsScalar("-units_second","1 second in scaled time units", 12577841947SLeila Ghaffari NULL, second, &second, NULL); CHKERRQ(ierr); 12677841947SLeila Ghaffari second = fabs(second); 12777841947SLeila Ghaffari 12877841947SLeila Ghaffari // -- Warnings 12977841947SLeila Ghaffari if (wind_type == WIND_ROTATION && user_wind) { 13077841947SLeila Ghaffari ierr = PetscPrintf(comm, 13177841947SLeila Ghaffari "Warning! Use -wind_translation only with -wind_type translation\n"); 13277841947SLeila Ghaffari CHKERRQ(ierr); 13377841947SLeila Ghaffari } 13477841947SLeila Ghaffari if (wind_type == WIND_TRANSLATION 13577841947SLeila Ghaffari && bubble_type == BUBBLE_CYLINDER && wind[2] != 0.) { 13677841947SLeila Ghaffari wind[2] = 0; 13777841947SLeila Ghaffari ierr = PetscPrintf(comm, 13877841947SLeila Ghaffari "Warning! Background wind in the z direction should be zero (-wind_translation x,x,0) with -bubble_type cylinder\n"); 13977841947SLeila Ghaffari CHKERRQ(ierr); 14077841947SLeila Ghaffari } 14177841947SLeila Ghaffari if (stab == STAB_NONE && CtauS != 0) { 14277841947SLeila Ghaffari ierr = PetscPrintf(comm, 14377841947SLeila Ghaffari "Warning! Use -CtauS only with -stab su or -stab supg\n"); 14477841947SLeila Ghaffari CHKERRQ(ierr); 14577841947SLeila Ghaffari } 14677841947SLeila Ghaffari if (stab == STAB_SUPG && !implicit) { 14777841947SLeila Ghaffari ierr = PetscPrintf(comm, 14877841947SLeila Ghaffari "Warning! Use -stab supg only with -implicit\n"); 14977841947SLeila Ghaffari CHKERRQ(ierr); 15077841947SLeila Ghaffari } 15177841947SLeila Ghaffari 15267490bc6SJeremy L Thompson PetscOptionsEnd(); 15377841947SLeila Ghaffari 15477841947SLeila Ghaffari // ------------------------------------------------------ 15577841947SLeila Ghaffari // Set up the PETSc context 15677841947SLeila Ghaffari // ------------------------------------------------------ 15777841947SLeila Ghaffari // -- Define derived units 15877841947SLeila Ghaffari Joule = kilogram * PetscSqr(meter) / PetscSqr(second); 15977841947SLeila Ghaffari 16077841947SLeila Ghaffari user->units->meter = meter; 16177841947SLeila Ghaffari user->units->kilogram = kilogram; 16277841947SLeila Ghaffari user->units->second = second; 16377841947SLeila Ghaffari user->units->Joule = Joule; 16477841947SLeila Ghaffari 16577841947SLeila Ghaffari // ------------------------------------------------------ 16677841947SLeila Ghaffari // Set up the libCEED context 16777841947SLeila Ghaffari // ------------------------------------------------------ 16877841947SLeila Ghaffari // -- Scale variables to desired units 16977841947SLeila Ghaffari E_wind *= Joule; 17077841947SLeila Ghaffari rc = fabs(rc) * meter; 171ba6664aeSJames Wright for (PetscInt i=0; i<3; i++) { 1721864f1c2SLeila Ghaffari wind[i] *= (meter/second); 1731864f1c2SLeila Ghaffari domain_size[i] *= meter; 1741864f1c2SLeila Ghaffari } 1751864f1c2SLeila Ghaffari problem->dm_scale = meter; 17677841947SLeila Ghaffari 17777841947SLeila Ghaffari // -- Setup Context 17877841947SLeila Ghaffari setup_context->rc = rc; 1791864f1c2SLeila Ghaffari setup_context->lx = domain_size[0]; 1801864f1c2SLeila Ghaffari setup_context->ly = domain_size[1]; 1811864f1c2SLeila Ghaffari setup_context->lz = domain_size[2]; 18277841947SLeila Ghaffari setup_context->wind[0] = wind[0]; 18377841947SLeila Ghaffari setup_context->wind[1] = wind[1]; 18477841947SLeila Ghaffari setup_context->wind[2] = wind[2]; 18577841947SLeila Ghaffari setup_context->wind_type = wind_type; 18677841947SLeila Ghaffari setup_context->bubble_type = bubble_type; 18777841947SLeila Ghaffari setup_context->bubble_continuity_type = bubble_continuity_type; 18877841947SLeila Ghaffari setup_context->time = 0; 18977841947SLeila Ghaffari 19077841947SLeila Ghaffari // -- QFunction Context 19177841947SLeila Ghaffari user->phys->stab = stab; 19277841947SLeila Ghaffari user->phys->wind_type = wind_type; 19377841947SLeila Ghaffari user->phys->bubble_type = bubble_type; 19477841947SLeila Ghaffari user->phys->bubble_continuity_type = bubble_continuity_type; 19577841947SLeila Ghaffari // if passed correctly 19677841947SLeila Ghaffari user->phys->implicit = implicit; 19777841947SLeila Ghaffari user->phys->has_curr_time = has_curr_time; 198841e4c73SJed Brown advection_ctx->CtauS = CtauS; 199841e4c73SJed Brown advection_ctx->E_wind = E_wind; 200841e4c73SJed Brown advection_ctx->implicit = implicit; 201841e4c73SJed Brown advection_ctx->strong_form = strong_form; 202841e4c73SJed Brown advection_ctx->stabilization = stab; 20377841947SLeila Ghaffari 204841e4c73SJed Brown CeedQFunctionContextCreate(user->ceed, &problem->ics.qfunction_context); 205841e4c73SJed Brown CeedQFunctionContextSetData(problem->ics.qfunction_context, CEED_MEM_HOST, 206841e4c73SJed Brown CEED_USE_POINTER, sizeof(*setup_context), setup_context); 20717ce10faSJeremy L Thompson CeedQFunctionContextSetDataDestroy(problem->ics.qfunction_context, 20817ce10faSJeremy L Thompson CEED_MEM_HOST, 20917ce10faSJeremy L Thompson FreeContextPetsc); 21077841947SLeila Ghaffari 211841e4c73SJed Brown CeedQFunctionContextCreate(user->ceed, &advection_context); 212841e4c73SJed Brown CeedQFunctionContextSetData(advection_context, CEED_MEM_HOST, 213d0b732dbSLeila Ghaffari CEED_USE_POINTER, 214841e4c73SJed Brown sizeof(*advection_ctx), advection_ctx); 215841e4c73SJed Brown CeedQFunctionContextSetDataDestroy(advection_context, CEED_MEM_HOST, 216841e4c73SJed Brown FreeContextPetsc); 217841e4c73SJed Brown problem->apply_vol_rhs.qfunction_context = advection_context; 218841e4c73SJed Brown CeedQFunctionContextReferenceCopy(advection_context, 219841e4c73SJed Brown &problem->apply_vol_ifunction.qfunction_context); 220841e4c73SJed Brown CeedQFunctionContextReferenceCopy(advection_context, 221841e4c73SJed Brown &problem->apply_inflow.qfunction_context); 22277841947SLeila Ghaffari PetscFunctionReturn(0); 22377841947SLeila Ghaffari } 22477841947SLeila Ghaffari 225b1289648SJed Brown PetscErrorCode PRINT_ADVECTION(ProblemData *problem, AppCtx app_ctx) { 22677841947SLeila Ghaffari MPI_Comm comm = PETSC_COMM_WORLD; 22777841947SLeila Ghaffari PetscErrorCode ierr; 228b1289648SJed Brown SetupContext setup_ctx; 229841e4c73SJed Brown AdvectionContext advection_ctx; 23077841947SLeila Ghaffari 231841e4c73SJed Brown PetscFunctionBeginUser; 232b1289648SJed Brown CeedQFunctionContextGetData(problem->ics.qfunction_context, 233b1289648SJed Brown CEED_MEM_HOST, &setup_ctx); 234841e4c73SJed Brown CeedQFunctionContextGetData(problem->apply_vol_rhs.qfunction_context, 235841e4c73SJed Brown CEED_MEM_HOST, &advection_ctx); 23677841947SLeila Ghaffari ierr = PetscPrintf(comm, 23777841947SLeila Ghaffari " Problem:\n" 23877841947SLeila Ghaffari " Problem Name : %s\n" 23977841947SLeila Ghaffari " Stabilization : %s\n" 240*990fdeb6SJeremy L Thompson " Bubble Type : %s (%" CeedInt_FMT "D)\n" 24177841947SLeila Ghaffari " Bubble Continuity : %s\n" 24277841947SLeila Ghaffari " Wind Type : %s\n", 243841e4c73SJed Brown app_ctx->problem_name, StabilizationTypes[advection_ctx->stabilization], 244841e4c73SJed Brown BubbleTypes[setup_ctx->bubble_type], 245841e4c73SJed Brown setup_ctx->bubble_type == BUBBLE_SPHERE ? 3 : 2, 246841e4c73SJed Brown BubbleContinuityTypes[setup_ctx->bubble_continuity_type], 247841e4c73SJed Brown WindTypes[setup_ctx->wind_type]); CHKERRQ(ierr); 24877841947SLeila Ghaffari 249841e4c73SJed Brown if (setup_ctx->wind_type == WIND_TRANSLATION) { 25077841947SLeila Ghaffari ierr = PetscPrintf(comm, 25177841947SLeila Ghaffari " Background Wind : %f,%f,%f\n", 25277841947SLeila Ghaffari setup_ctx->wind[0], setup_ctx->wind[1], setup_ctx->wind[2]); CHKERRQ(ierr); 25377841947SLeila Ghaffari } 254b1289648SJed Brown CeedQFunctionContextRestoreData(problem->ics.qfunction_context, 255b1289648SJed Brown &setup_ctx); 256841e4c73SJed Brown CeedQFunctionContextRestoreData(problem->apply_vol_rhs.qfunction_context, 257841e4c73SJed Brown &advection_ctx); 25877841947SLeila Ghaffari PetscFunctionReturn(0); 25977841947SLeila Ghaffari } 260