1 // Copyright (c) 2017-2022, Lawrence Livermore National Security, LLC and other CEED contributors. 2 // All Rights Reserved. See the top-level LICENSE and NOTICE files for details. 3 // 4 // SPDX-License-Identifier: BSD-2-Clause 5 // 6 // This file is part of CEED: http://github.com/ceed 7 8 /// @file 9 /// Utility functions for setting up Blasius Boundary Layer 10 11 #include "../qfunctions/blasius.h" 12 13 #include <ceed.h> 14 #include <petscdm.h> 15 #include <petscdt.h> 16 17 #include "../navierstokes.h" 18 #include "stg_shur14.h" 19 20 PetscErrorCode CompressibleBlasiusResidual(SNES snes, Vec X, Vec R, void *ctx) { 21 const BlasiusContext blasius = (BlasiusContext)ctx; 22 const PetscScalar *Tf, *Th; // Chebyshev coefficients 23 PetscScalar *r, f[4], h[4]; 24 PetscInt N = blasius->n_cheb; 25 PetscScalar Ma = Mach(&blasius->newtonian_ctx, blasius->T_inf, blasius->U_inf), Pr = Prandtl(&blasius->newtonian_ctx), 26 gamma = HeatCapacityRatio(&blasius->newtonian_ctx); 27 PetscFunctionBegin; 28 PetscCall(VecGetArrayRead(X, &Tf)); 29 Th = Tf + N; 30 PetscCall(VecGetArray(R, &r)); 31 32 // Left boundary conditions f = f' = 0 33 ChebyshevEval(N, Tf, -1., blasius->eta_max, f); 34 r[0] = f[0]; 35 r[1] = f[1]; 36 37 // f - right end boundary condition 38 ChebyshevEval(N, Tf, 1., blasius->eta_max, f); 39 r[2] = f[1] - 1.; 40 41 for (int i = 0; i < N - 3; i++) { 42 ChebyshevEval(N, Tf, blasius->X[i], blasius->eta_max, f); 43 ChebyshevEval(N - 1, Th, blasius->X[i], blasius->eta_max, h); 44 // mu and rho generally depend on h. 45 // We naively assume constant mu. 46 // For an ideal gas at constant pressure, density is inversely proportional to enthalpy. 47 // The *_tilde values are *relative* to their freestream values, and we proved first derivatives here. 48 const PetscScalar mu_tilde[2] = {1, 0}; 49 const PetscScalar rho_tilde[2] = {1 / h[0], -h[1] / PetscSqr(h[0])}; 50 const PetscScalar mu_rho_tilde[2] = { 51 mu_tilde[0] * rho_tilde[0], 52 mu_tilde[1] * rho_tilde[0] + mu_tilde[0] * rho_tilde[1], 53 }; 54 r[3 + i] = 2 * (mu_rho_tilde[0] * f[3] + mu_rho_tilde[1] * f[2]) + f[2] * f[0]; 55 r[N + 2 + i] = (mu_rho_tilde[0] * h[2] + mu_rho_tilde[1] * h[1]) + Pr * f[0] * h[1] + Pr * (gamma - 1) * mu_rho_tilde[0] * PetscSqr(Ma * f[2]); 56 } 57 58 // h - left end boundary condition 59 ChebyshevEval(N - 1, Th, -1., blasius->eta_max, h); 60 r[N] = h[0] - blasius->T_wall / blasius->T_inf; 61 62 // h - right end boundary condition 63 ChebyshevEval(N - 1, Th, 1., blasius->eta_max, h); 64 r[N + 1] = h[0] - 1.; 65 66 // Restore vectors 67 PetscCall(VecRestoreArrayRead(X, &Tf)); 68 PetscCall(VecRestoreArray(R, &r)); 69 PetscFunctionReturn(PETSC_SUCCESS); 70 } 71 72 PetscErrorCode ComputeChebyshevCoefficients(BlasiusContext blasius) { 73 SNES snes; 74 Vec sol, res; 75 PetscReal *w; 76 PetscInt N = blasius->n_cheb; 77 SNESConvergedReason reason; 78 const PetscScalar *cheb_coefs; 79 PetscFunctionBegin; 80 81 // Allocate memory 82 PetscCall(PetscMalloc2(N - 3, &blasius->X, N - 3, &w)); 83 PetscCall(PetscDTGaussQuadrature(N - 3, -1., 1., blasius->X, w)); 84 85 // Snes solve 86 PetscCall(SNESCreate(PETSC_COMM_SELF, &snes)); 87 PetscCall(VecCreate(PETSC_COMM_SELF, &sol)); 88 PetscCall(VecSetSizes(sol, PETSC_DECIDE, 2 * N - 1)); 89 PetscCall(VecSetFromOptions(sol)); 90 // Constant relative enthalpy 1 as initial guess 91 PetscCall(VecSetValue(sol, N, 1., INSERT_VALUES)); 92 PetscCall(VecDuplicate(sol, &res)); 93 PetscCall(SNESSetFunction(snes, res, CompressibleBlasiusResidual, blasius)); 94 PetscCall(SNESSetOptionsPrefix(snes, "chebyshev_")); 95 PetscCall(SNESSetFromOptions(snes)); 96 PetscCall(SNESSolve(snes, NULL, sol)); 97 PetscCall(SNESGetConvergedReason(snes, &reason)); 98 PetscCheck(reason >= 0, PETSC_COMM_WORLD, PETSC_ERR_CONV_FAILED, "The Chebyshev solve failed.\n"); 99 100 // Assign Chebyshev coefficients 101 PetscCall(VecGetArrayRead(sol, &cheb_coefs)); 102 for (int i = 0; i < N; i++) blasius->Tf_cheb[i] = cheb_coefs[i]; 103 for (int i = 0; i < N - 1; i++) blasius->Th_cheb[i] = cheb_coefs[i + N]; 104 105 // Destroy objects 106 PetscCall(PetscFree2(blasius->X, w)); 107 PetscCall(VecDestroy(&sol)); 108 PetscCall(VecDestroy(&res)); 109 PetscCall(SNESDestroy(&snes)); 110 PetscFunctionReturn(PETSC_SUCCESS); 111 } 112 113 static PetscErrorCode GetYNodeLocs(const MPI_Comm comm, const char path[PETSC_MAX_PATH_LEN], PetscReal **pynodes, PetscInt *nynodes) { 114 int ndims, dims[2]; 115 FILE *fp; 116 const PetscInt char_array_len = 512; 117 char line[char_array_len]; 118 char **array; 119 PetscReal *node_locs; 120 PetscFunctionBeginUser; 121 122 PetscCall(PetscFOpen(comm, path, "r", &fp)); 123 PetscCall(PetscSynchronizedFGets(comm, fp, char_array_len, line)); 124 PetscCall(PetscStrToArray(line, ' ', &ndims, &array)); 125 126 for (PetscInt i = 0; i < ndims; i++) dims[i] = atoi(array[i]); 127 if (ndims < 2) dims[1] = 1; // Assume 1 column of data is not otherwise specified 128 *nynodes = dims[0]; 129 PetscCall(PetscMalloc1(*nynodes, &node_locs)); 130 131 for (PetscInt i = 0; i < dims[0]; i++) { 132 PetscCall(PetscSynchronizedFGets(comm, fp, char_array_len, line)); 133 PetscCall(PetscStrToArray(line, ' ', &ndims, &array)); 134 PetscCheck(ndims == dims[1], comm, PETSC_ERR_FILE_UNEXPECTED, 135 "Line %" PetscInt_FMT " of %s does not contain correct number of columns (%d instead of %d)", i, path, ndims, dims[1]); 136 137 node_locs[i] = (PetscReal)atof(array[0]); 138 } 139 PetscCall(PetscFClose(comm, fp)); 140 *pynodes = node_locs; 141 PetscFunctionReturn(PETSC_SUCCESS); 142 } 143 144 /* \brief Modify the domain and mesh for blasius 145 * 146 * Modifies mesh such that `N` elements are within `refine_height` with a geometric growth ratio of `growth`. Excess elements are then distributed 147 * linearly in logspace to the top surface. 148 * 149 * The top surface is also angled downwards, so that it may be used as an outflow. 150 * It's angle is controlled by `top_angle` (in units of degrees). 151 * 152 * If `node_locs` is not NULL, then the nodes will be placed at `node_locs` locations. 153 * If it is NULL, then the modified coordinate values will be set in the array, along with `num_node_locs`. 154 */ 155 static PetscErrorCode ModifyMesh(MPI_Comm comm, DM dm, PetscInt dim, PetscReal growth, PetscInt N, PetscReal refine_height, PetscReal top_angle, 156 PetscReal *node_locs[], PetscInt *num_node_locs) { 157 PetscInt narr, ncoords; 158 PetscReal domain_min[3], domain_max[3], domain_size[3]; 159 PetscScalar *arr_coords; 160 Vec vec_coords; 161 PetscFunctionBeginUser; 162 163 PetscReal angle_coeff = tan(top_angle * (M_PI / 180)); 164 165 // Get domain boundary information 166 PetscCall(DMGetBoundingBox(dm, domain_min, domain_max)); 167 for (PetscInt i = 0; i < 3; i++) domain_size[i] = domain_max[i] - domain_min[i]; 168 169 // Get coords array from DM 170 PetscCall(DMGetCoordinatesLocal(dm, &vec_coords)); 171 PetscCall(VecGetLocalSize(vec_coords, &narr)); 172 PetscCall(VecGetArray(vec_coords, &arr_coords)); 173 174 PetscScalar(*coords)[dim] = (PetscScalar(*)[dim])arr_coords; 175 ncoords = narr / dim; 176 177 // Get mesh information 178 PetscInt nmax = 3, faces[3]; 179 PetscCall(PetscOptionsGetIntArray(NULL, NULL, "-dm_plex_box_faces", faces, &nmax, NULL)); 180 // Get element size of the box mesh, for indexing each node 181 const PetscReal dybox = domain_size[1] / faces[1]; 182 183 if (!*node_locs) { 184 // Calculate the first element height 185 PetscReal dy1 = refine_height * (growth - 1) / (pow(growth, N) - 1); 186 187 // Calculate log of sizing outside BL 188 PetscReal logdy = (log(domain_max[1]) - log(refine_height)) / (faces[1] - N); 189 190 *num_node_locs = faces[1] + 1; 191 PetscReal *temp_node_locs; 192 PetscCall(PetscMalloc1(*num_node_locs, &temp_node_locs)); 193 194 for (PetscInt i = 0; i < ncoords; i++) { 195 PetscInt y_box_index = round(coords[i][1] / dybox); 196 if (y_box_index <= N) { 197 coords[i][1] = 198 (1 - (coords[i][0] - domain_min[0]) * angle_coeff / domain_max[1]) * dy1 * (pow(growth, coords[i][1] / dybox) - 1) / (growth - 1); 199 } else { 200 PetscInt j = y_box_index - N; 201 coords[i][1] = (1 - (coords[i][0] - domain_min[0]) * angle_coeff / domain_max[1]) * exp(log(refine_height) + logdy * j); 202 } 203 if (coords[i][0] == domain_min[0] && coords[i][2] == domain_min[2]) temp_node_locs[y_box_index] = coords[i][1]; 204 } 205 206 *node_locs = temp_node_locs; 207 } else { 208 PetscCheck(*num_node_locs >= faces[1] + 1, comm, PETSC_ERR_FILE_UNEXPECTED, 209 "The y_node_locs_path has too few locations; There are %" PetscInt_FMT " + 1 nodes, but only %" PetscInt_FMT " locations given", 210 faces[1] + 1, *num_node_locs); 211 if (*num_node_locs > faces[1] + 1) { 212 PetscCall(PetscPrintf(comm, 213 "WARNING: y_node_locs_path has more locations (%" PetscInt_FMT ") " 214 "than the mesh has nodes (%" PetscInt_FMT "). This maybe unintended.\n", 215 *num_node_locs, faces[1] + 1)); 216 } 217 PetscScalar max_y = (*node_locs)[faces[1]]; 218 219 for (PetscInt i = 0; i < ncoords; i++) { 220 // Determine which y-node we're at 221 PetscInt y_box_index = round(coords[i][1] / dybox); 222 coords[i][1] = (1 - (coords[i][0] - domain_min[0]) * angle_coeff / max_y) * (*node_locs)[y_box_index]; 223 } 224 } 225 226 PetscCall(VecRestoreArray(vec_coords, &arr_coords)); 227 PetscCall(DMSetCoordinatesLocal(dm, vec_coords)); 228 229 PetscFunctionReturn(PETSC_SUCCESS); 230 } 231 232 PetscErrorCode NS_BLASIUS(ProblemData *problem, DM dm, void *ctx, SimpleBC bc) { 233 User user = *(User *)ctx; 234 MPI_Comm comm = user->comm; 235 Ceed ceed = user->ceed; 236 PetscBool use_stg = PETSC_FALSE; 237 BlasiusContext blasius_ctx; 238 NewtonianIdealGasContext newtonian_ig_ctx; 239 CeedQFunctionContext blasius_context; 240 241 PetscFunctionBeginUser; 242 PetscCall(NS_NEWTONIAN_IG(problem, dm, ctx, bc)); 243 PetscCall(PetscCalloc1(1, &blasius_ctx)); 244 245 // ------------------------------------------------------ 246 // SET UP Blasius 247 // ------------------------------------------------------ 248 problem->ics.qfunction = ICsBlasius; 249 problem->ics.qfunction_loc = ICsBlasius_loc; 250 251 CeedScalar U_inf = 40; // m/s 252 CeedScalar T_inf = 288.; // K 253 CeedScalar T_wall = 288.; // K 254 CeedScalar delta0 = 4.2e-3; // m 255 CeedScalar P0 = 1.01e5; // Pa 256 PetscInt N = 20; // Number of Chebyshev terms 257 PetscBool weakT = PETSC_FALSE; // weak density or temperature 258 PetscReal mesh_refine_height = 5.9e-4; // m 259 PetscReal mesh_growth = 1.08; // [-] 260 PetscInt mesh_Ndelta = 45; // [-] 261 PetscReal mesh_top_angle = 5; // degrees 262 char mesh_ynodes_path[PETSC_MAX_PATH_LEN] = ""; 263 264 PetscOptionsBegin(comm, NULL, "Options for BLASIUS problem", NULL); 265 PetscCall(PetscOptionsBool("-weakT", "Change from rho weak to T weak at inflow", NULL, weakT, &weakT, NULL)); 266 PetscCall(PetscOptionsScalar("-velocity_infinity", "Velocity at boundary layer edge", NULL, U_inf, &U_inf, NULL)); 267 PetscCall(PetscOptionsScalar("-temperature_infinity", "Temperature at boundary layer edge", NULL, T_inf, &T_inf, NULL)); 268 PetscCall(PetscOptionsScalar("-temperature_wall", "Temperature at wall", NULL, T_wall, &T_wall, NULL)); 269 PetscCall(PetscOptionsScalar("-delta0", "Boundary layer height at inflow", NULL, delta0, &delta0, NULL)); 270 PetscCall(PetscOptionsScalar("-P0", "Pressure at outflow", NULL, P0, &P0, NULL)); 271 PetscCall(PetscOptionsInt("-n_chebyshev", "Number of Chebyshev terms", NULL, N, &N, NULL)); 272 PetscCheck(3 <= N && N <= BLASIUS_MAX_N_CHEBYSHEV, comm, PETSC_ERR_ARG_OUTOFRANGE, "-n_chebyshev %" PetscInt_FMT " must be in range [3, %d]", N, 273 BLASIUS_MAX_N_CHEBYSHEV); 274 PetscCall(PetscOptionsBoundedInt("-platemesh_Ndelta", "Velocity at boundary layer edge", NULL, mesh_Ndelta, &mesh_Ndelta, NULL, 1)); 275 PetscCall(PetscOptionsScalar("-platemesh_refine_height", "Height of boundary layer mesh refinement", NULL, mesh_refine_height, &mesh_refine_height, 276 NULL)); 277 PetscCall(PetscOptionsScalar("-platemesh_growth", "Geometric growth rate of boundary layer mesh", NULL, mesh_growth, &mesh_growth, NULL)); 278 PetscCall( 279 PetscOptionsScalar("-platemesh_top_angle", "Geometric top_angle rate of boundary layer mesh", NULL, mesh_top_angle, &mesh_top_angle, NULL)); 280 PetscCall(PetscOptionsString("-platemesh_y_node_locs_path", 281 "Path to file with y node locations. " 282 "If empty, will use the algorithmic mesh warping.", 283 NULL, mesh_ynodes_path, mesh_ynodes_path, sizeof(mesh_ynodes_path), NULL)); 284 PetscCall(PetscOptionsBool("-stg_use", "Use STG inflow boundary condition", NULL, use_stg, &use_stg, NULL)); 285 PetscOptionsEnd(); 286 287 PetscScalar meter = user->units->meter; 288 PetscScalar second = user->units->second; 289 PetscScalar Kelvin = user->units->Kelvin; 290 PetscScalar Pascal = user->units->Pascal; 291 292 T_inf *= Kelvin; 293 T_wall *= Kelvin; 294 P0 *= Pascal; 295 U_inf *= meter / second; 296 delta0 *= meter; 297 298 PetscReal *mesh_ynodes = NULL; 299 PetscInt mesh_nynodes = 0; 300 if (strcmp(mesh_ynodes_path, "")) { 301 PetscCall(GetYNodeLocs(comm, mesh_ynodes_path, &mesh_ynodes, &mesh_nynodes)); 302 } 303 PetscCall(ModifyMesh(comm, dm, problem->dim, mesh_growth, mesh_Ndelta, mesh_refine_height, mesh_top_angle, &mesh_ynodes, &mesh_nynodes)); 304 305 // Some properties depend on parameters from NewtonianIdealGas 306 PetscCallCeed(ceed, CeedQFunctionContextGetData(problem->apply_vol_rhs.qfunction_context, CEED_MEM_HOST, &newtonian_ig_ctx)); 307 308 blasius_ctx->weakT = weakT; 309 blasius_ctx->U_inf = U_inf; 310 blasius_ctx->T_inf = T_inf; 311 blasius_ctx->T_wall = T_wall; 312 blasius_ctx->delta0 = delta0; 313 blasius_ctx->P0 = P0; 314 blasius_ctx->n_cheb = N; 315 newtonian_ig_ctx->P0 = P0; 316 blasius_ctx->implicit = user->phys->implicit; 317 blasius_ctx->newtonian_ctx = *newtonian_ig_ctx; 318 319 { 320 PetscReal domain_min[3], domain_max[3]; 321 PetscCall(DMGetBoundingBox(dm, domain_min, domain_max)); 322 blasius_ctx->x_inflow = domain_min[0]; 323 blasius_ctx->eta_max = 5 * domain_max[1] / blasius_ctx->delta0; 324 } 325 PetscBool diff_filter_mms = PETSC_FALSE; 326 PetscCall(PetscOptionsGetBool(NULL, NULL, "-diff_filter_mms", &diff_filter_mms, NULL)); 327 if (!use_stg && !diff_filter_mms) PetscCall(ComputeChebyshevCoefficients(blasius_ctx)); 328 329 PetscCallCeed(ceed, CeedQFunctionContextRestoreData(problem->apply_vol_rhs.qfunction_context, &newtonian_ig_ctx)); 330 331 PetscCallCeed(ceed, CeedQFunctionContextCreate(user->ceed, &blasius_context)); 332 PetscCallCeed(ceed, CeedQFunctionContextSetData(blasius_context, CEED_MEM_HOST, CEED_USE_POINTER, sizeof(*blasius_ctx), blasius_ctx)); 333 PetscCallCeed(ceed, CeedQFunctionContextSetDataDestroy(blasius_context, CEED_MEM_HOST, FreeContextPetsc)); 334 335 PetscCallCeed(ceed, CeedQFunctionContextDestroy(&problem->ics.qfunction_context)); 336 problem->ics.qfunction_context = blasius_context; 337 if (use_stg) { 338 PetscCall(SetupSTG(comm, dm, problem, user, weakT, T_inf, P0, mesh_ynodes, mesh_nynodes)); 339 } else if (diff_filter_mms) { 340 PetscCall(DifferentialFilter_MMS_ICSetup(problem)); 341 } else { 342 problem->apply_inflow.qfunction = Blasius_Inflow; 343 problem->apply_inflow.qfunction_loc = Blasius_Inflow_loc; 344 problem->apply_inflow_jacobian.qfunction = Blasius_Inflow_Jacobian; 345 problem->apply_inflow_jacobian.qfunction_loc = Blasius_Inflow_Jacobian_loc; 346 PetscCallCeed(ceed, CeedQFunctionContextReferenceCopy(blasius_context, &problem->apply_inflow.qfunction_context)); 347 PetscCallCeed(ceed, CeedQFunctionContextReferenceCopy(blasius_context, &problem->apply_inflow_jacobian.qfunction_context)); 348 } 349 PetscCall(PetscFree(mesh_ynodes)); 350 PetscFunctionReturn(PETSC_SUCCESS); 351 } 352