1*3d8e8822SJeremy L Thompson // Copyright (c) 2017-2022, Lawrence Livermore National Security, LLC and other CEED contributors. 2*3d8e8822SJeremy L Thompson // All Rights Reserved. See the top-level LICENSE and NOTICE files for details. 377841947SLeila Ghaffari // 4*3d8e8822SJeremy L Thompson // SPDX-License-Identifier: BSD-2-Clause 577841947SLeila Ghaffari // 6*3d8e8822SJeremy L Thompson // This file is part of CEED: http://github.com/ceed 777841947SLeila Ghaffari 877841947SLeila Ghaffari /// @file 977841947SLeila Ghaffari /// Geometric factors (3D) for Navier-Stokes example using PETSc 1077841947SLeila Ghaffari 1177841947SLeila Ghaffari #ifndef setup_geo_h 1277841947SLeila Ghaffari #define setup_geo_h 1377841947SLeila Ghaffari 1477841947SLeila Ghaffari #include <math.h> 1588b783a1SJames Wright #include <ceed.h> 1677841947SLeila Ghaffari 1777841947SLeila Ghaffari // ***************************************************************************** 1877841947SLeila Ghaffari // This QFunction sets up the geometric factors required for integration and 1977841947SLeila Ghaffari // coordinate transformations 2077841947SLeila Ghaffari // 2177841947SLeila Ghaffari // Reference (parent) coordinates: X 2277841947SLeila Ghaffari // Physical (current) coordinates: x 2377841947SLeila Ghaffari // Change of coordinate matrix: dxdX_{i,j} = x_{i,j} (indicial notation) 2477841947SLeila Ghaffari // Inverse of change of coordinate matrix: dXdx_{i,j} = (detJ^-1) * X_{i,j} 2577841947SLeila Ghaffari // 2677841947SLeila Ghaffari // All quadrature data is stored in 10 field vector of quadrature data. 2777841947SLeila Ghaffari // 2877841947SLeila Ghaffari // We require the determinant of the Jacobian to properly compute integrals of 2977841947SLeila Ghaffari // the form: int( v u ) 3077841947SLeila Ghaffari // 3177841947SLeila Ghaffari // Determinant of Jacobian: 3277841947SLeila Ghaffari // detJ = J11*A11 + J21*A12 + J31*A13 3377841947SLeila Ghaffari // Jij = Jacobian entry ij 3477841947SLeila Ghaffari // Aij = Adjoint ij 3577841947SLeila Ghaffari // 3677841947SLeila Ghaffari // Stored: w detJ 3777841947SLeila Ghaffari // in q_data[0] 3877841947SLeila Ghaffari // 3977841947SLeila Ghaffari // We require the transpose of the inverse of the Jacobian to properly compute 4077841947SLeila Ghaffari // integrals of the form: int( gradv u ) 4177841947SLeila Ghaffari // 4277841947SLeila Ghaffari // Inverse of Jacobian: 4377841947SLeila Ghaffari // dXdx_i,j = Aij / detJ 4477841947SLeila Ghaffari // 4577841947SLeila Ghaffari // Stored: Aij / detJ 4677841947SLeila Ghaffari // in q_data[1:9] as 4777841947SLeila Ghaffari // (detJ^-1) * [A11 A12 A13] 4877841947SLeila Ghaffari // [A21 A22 A23] 4977841947SLeila Ghaffari // [A31 A32 A33] 5077841947SLeila Ghaffari // 5177841947SLeila Ghaffari // ***************************************************************************** 5277841947SLeila Ghaffari CEED_QFUNCTION(Setup)(void *ctx, CeedInt Q, 5377841947SLeila Ghaffari const CeedScalar *const *in, CeedScalar *const *out) { 5477841947SLeila Ghaffari // *INDENT-OFF* 5577841947SLeila Ghaffari // Inputs 5677841947SLeila Ghaffari const CeedScalar (*J)[3][CEED_Q_VLA] = (const CeedScalar(*)[3][CEED_Q_VLA])in[0], 5777841947SLeila Ghaffari (*w) = in[1]; 5877841947SLeila Ghaffari 5977841947SLeila Ghaffari // Outputs 6077841947SLeila Ghaffari CeedScalar (*q_data)[CEED_Q_VLA] = (CeedScalar(*)[CEED_Q_VLA])out[0]; 6177841947SLeila Ghaffari // *INDENT-ON* 6277841947SLeila Ghaffari 6377841947SLeila Ghaffari CeedPragmaSIMD 6477841947SLeila Ghaffari // Quadrature Point Loop 6577841947SLeila Ghaffari for (CeedInt i=0; i<Q; i++) { 6677841947SLeila Ghaffari // Setup 6777841947SLeila Ghaffari const CeedScalar J11 = J[0][0][i]; 6877841947SLeila Ghaffari const CeedScalar J21 = J[0][1][i]; 6977841947SLeila Ghaffari const CeedScalar J31 = J[0][2][i]; 7077841947SLeila Ghaffari const CeedScalar J12 = J[1][0][i]; 7177841947SLeila Ghaffari const CeedScalar J22 = J[1][1][i]; 7277841947SLeila Ghaffari const CeedScalar J32 = J[1][2][i]; 7377841947SLeila Ghaffari const CeedScalar J13 = J[2][0][i]; 7477841947SLeila Ghaffari const CeedScalar J23 = J[2][1][i]; 7577841947SLeila Ghaffari const CeedScalar J33 = J[2][2][i]; 7677841947SLeila Ghaffari const CeedScalar A11 = J22*J33 - J23*J32; 7777841947SLeila Ghaffari const CeedScalar A12 = J13*J32 - J12*J33; 7877841947SLeila Ghaffari const CeedScalar A13 = J12*J23 - J13*J22; 7977841947SLeila Ghaffari const CeedScalar A21 = J23*J31 - J21*J33; 8077841947SLeila Ghaffari const CeedScalar A22 = J11*J33 - J13*J31; 8177841947SLeila Ghaffari const CeedScalar A23 = J13*J21 - J11*J23; 8277841947SLeila Ghaffari const CeedScalar A31 = J21*J32 - J22*J31; 8377841947SLeila Ghaffari const CeedScalar A32 = J12*J31 - J11*J32; 8477841947SLeila Ghaffari const CeedScalar A33 = J11*J22 - J12*J21; 8577841947SLeila Ghaffari const CeedScalar detJ = J11*A11 + J21*A12 + J31*A13; 8677841947SLeila Ghaffari 8777841947SLeila Ghaffari // Qdata 8877841947SLeila Ghaffari // -- Interp-to-Interp q_data 8977841947SLeila Ghaffari q_data[0][i] = w[i] * detJ; 9077841947SLeila Ghaffari // -- Interp-to-Grad q_data 9177841947SLeila Ghaffari // Inverse of change of coordinate matrix: X_i,j 9277841947SLeila Ghaffari q_data[1][i] = A11 / detJ; 9377841947SLeila Ghaffari q_data[2][i] = A12 / detJ; 9477841947SLeila Ghaffari q_data[3][i] = A13 / detJ; 9577841947SLeila Ghaffari q_data[4][i] = A21 / detJ; 9677841947SLeila Ghaffari q_data[5][i] = A22 / detJ; 9777841947SLeila Ghaffari q_data[6][i] = A23 / detJ; 9877841947SLeila Ghaffari q_data[7][i] = A31 / detJ; 9977841947SLeila Ghaffari q_data[8][i] = A32 / detJ; 10077841947SLeila Ghaffari q_data[9][i] = A33 / detJ; 10177841947SLeila Ghaffari 10277841947SLeila Ghaffari } // End of Quadrature Point Loop 10377841947SLeila Ghaffari 10477841947SLeila Ghaffari // Return 10577841947SLeila Ghaffari return 0; 10677841947SLeila Ghaffari } 10777841947SLeila Ghaffari 10877841947SLeila Ghaffari // ***************************************************************************** 10977841947SLeila Ghaffari // This QFunction sets up the geometric factor required for integration when 11077841947SLeila Ghaffari // reference coordinates are in 2D and the physical coordinates are in 3D 11177841947SLeila Ghaffari // 11277841947SLeila Ghaffari // Reference (parent) 2D coordinates: X 11377841947SLeila Ghaffari // Physical (current) 3D coordinates: x 11477841947SLeila Ghaffari // Change of coordinate matrix: 11577841947SLeila Ghaffari // dxdX_{i,j} = dx_i/dX_j (indicial notation) [3 * 2] 11677841947SLeila Ghaffari // 11777841947SLeila Ghaffari // (J1,J2,J3) is given by the cross product of the columns of dxdX_{i,j} 11877841947SLeila Ghaffari // 11977841947SLeila Ghaffari // detJb is the magnitude of (J1,J2,J3) 12077841947SLeila Ghaffari // 12177841947SLeila Ghaffari // All quadrature data is stored in 4 field vector of quadrature data. 12277841947SLeila Ghaffari // 12377841947SLeila Ghaffari // We require the determinant of the Jacobian to properly compute integrals of 12477841947SLeila Ghaffari // the form: int( u v ) 12577841947SLeila Ghaffari // 12677841947SLeila Ghaffari // Stored: w detJb 12777841947SLeila Ghaffari // in q_data_sur[0] 12877841947SLeila Ghaffari // 12977841947SLeila Ghaffari // Normal vector = (J1,J2,J3) / detJb 13077841947SLeila Ghaffari // 13177841947SLeila Ghaffari // Stored: (J1,J2,J3) / detJb 13277841947SLeila Ghaffari // in q_data_sur[1:3] as 13377841947SLeila Ghaffari // (detJb^-1) * [ J1 ] 13477841947SLeila Ghaffari // [ J2 ] 13577841947SLeila Ghaffari // [ J3 ] 13677841947SLeila Ghaffari // 13777841947SLeila Ghaffari // ***************************************************************************** 13877841947SLeila Ghaffari CEED_QFUNCTION(SetupBoundary)(void *ctx, CeedInt Q, 13977841947SLeila Ghaffari const CeedScalar *const *in, CeedScalar *const *out) { 14077841947SLeila Ghaffari // *INDENT-OFF* 14177841947SLeila Ghaffari // Inputs 14277841947SLeila Ghaffari const CeedScalar (*J)[3][CEED_Q_VLA] = (const CeedScalar(*)[3][CEED_Q_VLA])in[0], 14377841947SLeila Ghaffari (*w) = in[1]; 14477841947SLeila Ghaffari // Outputs 14577841947SLeila Ghaffari CeedScalar (*q_data_sur)[CEED_Q_VLA] = (CeedScalar(*)[CEED_Q_VLA])out[0]; 14677841947SLeila Ghaffari 14777841947SLeila Ghaffari CeedPragmaSIMD 14877841947SLeila Ghaffari // Quadrature Point Loop 14977841947SLeila Ghaffari for (CeedInt i=0; i<Q; i++) { 15077841947SLeila Ghaffari // Setup 15177841947SLeila Ghaffari const CeedScalar dxdX[3][2] = {{J[0][0][i], 15277841947SLeila Ghaffari J[1][0][i]}, 15377841947SLeila Ghaffari {J[0][1][i], 15477841947SLeila Ghaffari J[1][1][i]}, 15577841947SLeila Ghaffari {J[0][2][i], 15677841947SLeila Ghaffari J[1][2][i]} 15777841947SLeila Ghaffari }; 15877841947SLeila Ghaffari // *INDENT-ON* 15977841947SLeila Ghaffari // J1, J2, and J3 are given by the cross product of the columns of dxdX 16077841947SLeila Ghaffari const CeedScalar J1 = dxdX[1][0]*dxdX[2][1] - dxdX[2][0]*dxdX[1][1]; 16177841947SLeila Ghaffari const CeedScalar J2 = dxdX[2][0]*dxdX[0][1] - dxdX[0][0]*dxdX[2][1]; 16277841947SLeila Ghaffari const CeedScalar J3 = dxdX[0][0]*dxdX[1][1] - dxdX[1][0]*dxdX[0][1]; 16377841947SLeila Ghaffari 16477841947SLeila Ghaffari const CeedScalar detJb = sqrt(J1*J1 + J2*J2 + J3*J3); 16577841947SLeila Ghaffari 16677841947SLeila Ghaffari // q_data_sur 16777841947SLeila Ghaffari // -- Interp-to-Interp q_data_sur 16877841947SLeila Ghaffari q_data_sur[0][i] = w[i] * detJb; 16977841947SLeila Ghaffari q_data_sur[1][i] = J1 / detJb; 17077841947SLeila Ghaffari q_data_sur[2][i] = J2 / detJb; 17177841947SLeila Ghaffari q_data_sur[3][i] = J3 / detJb; 17277841947SLeila Ghaffari 17377841947SLeila Ghaffari } // End of Quadrature Point Loop 17477841947SLeila Ghaffari 17577841947SLeila Ghaffari // Return 17677841947SLeila Ghaffari return 0; 17777841947SLeila Ghaffari } 17877841947SLeila Ghaffari 17977841947SLeila Ghaffari // ***************************************************************************** 18077841947SLeila Ghaffari 18177841947SLeila Ghaffari #endif // setup_geo_h 182