xref: /libCEED/examples/fluids/src/grid_anisotropy_tensor.c (revision 58549094d8a305d0f4b066b44680cf34cff212e7)
1 // Copyright (c) 2017-2023, Lawrence Livermore National Security, LLC and other CEED contributors.
2 // All Rights Reserved. See the top-level LICENSE and NOTICE files for details.
3 //
4 // SPDX-License-Identifier: BSD-2-Clause
5 //
6 // This file is part of CEED:  http://github.com/ceed
7 
8 #include "../qfunctions/grid_anisotropy_tensor.h"
9 
10 #include <petscdmplex.h>
11 
12 #include "../navierstokes.h"
13 
14 PetscErrorCode GridAnisotropyTensorProjectionSetupApply(Ceed ceed, User user, CeedData ceed_data, CeedElemRestriction *elem_restr_grid_aniso,
15                                                         CeedVector *grid_aniso_vector) {
16   NodalProjectionData  grid_aniso_proj;
17   OperatorApplyContext mass_matop_ctx, l2_rhs_ctx;
18   CeedOperator         op_rhs_assemble, op_mass;
19   CeedQFunction        qf_rhs_assemble, qf_mass;
20   CeedBasis            basis_grid_aniso;
21   PetscInt             dim;
22   CeedInt              q_data_size;
23   MPI_Comm             comm = PetscObjectComm((PetscObject)user->dm);
24   KSP                  ksp;
25 
26   PetscFunctionBeginUser;
27   PetscCall(PetscNew(&grid_aniso_proj));
28 
29   // -- Create DM for Anisotropic tensor L^2 projection
30   grid_aniso_proj->num_comp = 7;
31   PetscCall(DMClone(user->dm, &grid_aniso_proj->dm));
32   PetscCall(DMGetDimension(grid_aniso_proj->dm, &dim));
33   PetscCall(PetscObjectSetName((PetscObject)grid_aniso_proj->dm, "Grid Anisotropy Tensor Projection"));
34 
35   {  // -- Setup DM
36     PetscFE      fe;
37     PetscSection section;
38     PetscInt     q_order = user->app_ctx->degree + user->app_ctx->q_extra;
39     PetscCall(PetscFECreateLagrange(PETSC_COMM_SELF, dim, grid_aniso_proj->num_comp, PETSC_FALSE, user->app_ctx->degree, q_order, &fe));
40     PetscCall(PetscObjectSetName((PetscObject)fe, "Grid Anisotropy Tensor Projection"));
41     PetscCall(DMAddField(grid_aniso_proj->dm, NULL, (PetscObject)fe));
42     PetscCall(DMCreateDS(grid_aniso_proj->dm));
43     PetscCall(DMPlexSetClosurePermutationTensor(grid_aniso_proj->dm, PETSC_DETERMINE, NULL));
44 
45     PetscCall(DMGetLocalSection(grid_aniso_proj->dm, &section));
46     PetscCall(PetscSectionSetFieldName(section, 0, ""));
47     PetscCall(PetscSectionSetComponentName(section, 0, 0, "KMGridAnisotropyTensorXX"));
48     PetscCall(PetscSectionSetComponentName(section, 0, 1, "KMGridAnisotropyTensorYY"));
49     PetscCall(PetscSectionSetComponentName(section, 0, 2, "KMGridAnisotropyTensorZZ"));
50     PetscCall(PetscSectionSetComponentName(section, 0, 3, "KMGridAnisotropyTensorYZ"));
51     PetscCall(PetscSectionSetComponentName(section, 0, 4, "KMGridAnisotropyTensorXZ"));
52     PetscCall(PetscSectionSetComponentName(section, 0, 5, "KMGridAnisotropyTensorXY"));
53     PetscCall(PetscSectionSetComponentName(section, 0, 6, "GridAnisotropyTensorFrobNorm"));
54 
55     PetscCall(PetscFEDestroy(&fe));
56   }
57 
58   // -- Get Pre-requisite things
59   PetscCallCeed(ceed, CeedElemRestrictionGetNumComponents(ceed_data->elem_restr_qd_i, &q_data_size));
60 
61   PetscCall(GetRestrictionForDomain(ceed, grid_aniso_proj->dm, 0, 0, 0, 0, -1, grid_aniso_proj->num_comp, elem_restr_grid_aniso, NULL, NULL));
62   PetscCall(CreateBasisFromPlex(ceed, grid_aniso_proj->dm, 0, 0, 0, 0, &basis_grid_aniso));
63 
64   // -- Build RHS operator
65   PetscCallCeed(ceed, CeedQFunctionCreateInterior(ceed, 1, AnisotropyTensorProjection, AnisotropyTensorProjection_loc, &qf_rhs_assemble));
66   PetscCallCeed(ceed, CeedQFunctionAddInput(qf_rhs_assemble, "qdata", q_data_size, CEED_EVAL_NONE));
67   PetscCallCeed(ceed, CeedQFunctionAddOutput(qf_rhs_assemble, "v", grid_aniso_proj->num_comp, CEED_EVAL_INTERP));
68 
69   PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_rhs_assemble, NULL, NULL, &op_rhs_assemble));
70   PetscCallCeed(ceed, CeedOperatorSetField(op_rhs_assemble, "qdata", ceed_data->elem_restr_qd_i, CEED_BASIS_COLLOCATED, ceed_data->q_data));
71   PetscCallCeed(ceed, CeedOperatorSetField(op_rhs_assemble, "v", *elem_restr_grid_aniso, basis_grid_aniso, CEED_VECTOR_ACTIVE));
72 
73   PetscCall(OperatorApplyContextCreate(user->dm, grid_aniso_proj->dm, ceed, op_rhs_assemble, CEED_VECTOR_NONE, NULL, NULL, NULL, &l2_rhs_ctx));
74 
75   // -- Build Mass Operator
76   PetscCall(CreateMassQFunction(ceed, grid_aniso_proj->num_comp, q_data_size, &qf_mass));
77   PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_mass, NULL, NULL, &op_mass));
78   PetscCallCeed(ceed, CeedOperatorSetField(op_mass, "u", *elem_restr_grid_aniso, basis_grid_aniso, CEED_VECTOR_ACTIVE));
79   PetscCallCeed(ceed, CeedOperatorSetField(op_mass, "qdata", ceed_data->elem_restr_qd_i, CEED_BASIS_COLLOCATED, ceed_data->q_data));
80   PetscCallCeed(ceed, CeedOperatorSetField(op_mass, "v", *elem_restr_grid_aniso, basis_grid_aniso, CEED_VECTOR_ACTIVE));
81 
82   {  // -- Setup KSP for L^2 projection
83     Mat mat_mass;
84     PetscCall(OperatorApplyContextCreate(grid_aniso_proj->dm, grid_aniso_proj->dm, ceed, op_mass, NULL, NULL, NULL, NULL, &mass_matop_ctx));
85     PetscCall(CreateMatShell_Ceed(mass_matop_ctx, &mat_mass));
86 
87     PetscCall(KSPCreate(comm, &ksp));
88     PetscCall(KSPSetOptionsPrefix(ksp, "grid_anisotropy_tensor_projection_"));
89     {
90       PC pc;
91       PetscCall(KSPGetPC(ksp, &pc));
92       PetscCall(PCSetType(pc, PCJACOBI));
93       PetscCall(PCJacobiSetType(pc, PC_JACOBI_DIAGONAL));
94       PetscCall(KSPSetType(ksp, KSPCG));
95       PetscCall(KSPSetNormType(ksp, KSP_NORM_NATURAL));
96       PetscCall(KSPSetTolerances(ksp, 1e-10, PETSC_DEFAULT, PETSC_DEFAULT, PETSC_DEFAULT));
97     }
98     PetscCall(KSPSetOperators(ksp, mat_mass, mat_mass));
99     PetscCall(KSPSetFromOptions(ksp));
100   }
101 
102   {  // -- Project anisotropy data and store in CeedVector
103     Vec Grid_Anisotropy, grid_anisotropy_loc;
104 
105     // Get L^2 Projection RHS
106     PetscCall(DMGetGlobalVector(grid_aniso_proj->dm, &Grid_Anisotropy));
107 
108     PetscCall(ApplyCeedOperatorLocalToGlobal(NULL, Grid_Anisotropy, l2_rhs_ctx));
109 
110     // Solve projection problem
111     PetscCall(KSPSolve(ksp, Grid_Anisotropy, Grid_Anisotropy));
112 
113     // Copy anisotropy tensor data to CeedVector
114     PetscCall(DMGetLocalVector(grid_aniso_proj->dm, &grid_anisotropy_loc));
115     PetscCallCeed(ceed, CeedElemRestrictionCreateVector(*elem_restr_grid_aniso, grid_aniso_vector, NULL));
116     PetscCall(DMGlobalToLocal(grid_aniso_proj->dm, Grid_Anisotropy, INSERT_VALUES, grid_anisotropy_loc));
117     PetscCall(VecCopyP2C(grid_anisotropy_loc, *grid_aniso_vector));
118     PetscCall(DMRestoreLocalVector(grid_aniso_proj->dm, &grid_anisotropy_loc));
119     PetscCall(DMRestoreGlobalVector(grid_aniso_proj->dm, &Grid_Anisotropy));
120   }
121 
122   // -- Cleanup
123   PetscCall(NodalProjectionDataDestroy(grid_aniso_proj));
124   PetscCall(OperatorApplyContextDestroy(l2_rhs_ctx));
125   PetscCall(OperatorApplyContextDestroy(mass_matop_ctx));
126   PetscCallCeed(ceed, CeedQFunctionDestroy(&qf_rhs_assemble));
127   PetscCallCeed(ceed, CeedQFunctionDestroy(&qf_mass));
128   PetscCallCeed(ceed, CeedBasisDestroy(&basis_grid_aniso));
129   PetscCallCeed(ceed, CeedOperatorDestroy(&op_rhs_assemble));
130   PetscCallCeed(ceed, CeedOperatorDestroy(&op_mass));
131   PetscCall(KSPDestroy(&ksp));
132   PetscFunctionReturn(PETSC_SUCCESS);
133 }
134 
135 PetscErrorCode GridAnisotropyTensorCalculateCollocatedVector(Ceed ceed, User user, CeedData ceed_data, CeedElemRestriction *elem_restr_grid_aniso,
136                                                              CeedVector *aniso_colloc_ceed, PetscInt *num_comp_aniso) {
137   CeedInt       q_data_size, num_nodes;
138   CeedQFunction qf_colloc;
139   CeedOperator  op_colloc;
140 
141   PetscFunctionBeginUser;
142   *num_comp_aniso = 7;
143   PetscCallCeed(ceed, CeedBasisGetNumNodes(ceed_data->basis_q, &num_nodes));
144   PetscCallCeed(ceed, CeedElemRestrictionGetNumComponents(ceed_data->elem_restr_qd_i, &q_data_size));
145   PetscCall(GetRestrictionForDomain(ceed, user->dm, 0, 0, 0, 0, num_nodes, *num_comp_aniso, NULL, NULL, elem_restr_grid_aniso));
146 
147   // -- Build collocation operator
148   PetscCallCeed(ceed, CeedQFunctionCreateInterior(ceed, 1, AnisotropyTensorCollocate, AnisotropyTensorCollocate_loc, &qf_colloc));
149   PetscCallCeed(ceed, CeedQFunctionAddInput(qf_colloc, "qdata", q_data_size, CEED_EVAL_NONE));
150   PetscCallCeed(ceed, CeedQFunctionAddOutput(qf_colloc, "v", *num_comp_aniso, CEED_EVAL_NONE));
151 
152   PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_colloc, NULL, NULL, &op_colloc));
153   PetscCallCeed(ceed, CeedOperatorSetField(op_colloc, "qdata", ceed_data->elem_restr_qd_i, CEED_BASIS_COLLOCATED, ceed_data->q_data));
154   PetscCallCeed(ceed, CeedOperatorSetField(op_colloc, "v", *elem_restr_grid_aniso, CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE));
155 
156   PetscCallCeed(ceed, CeedElemRestrictionCreateVector(*elem_restr_grid_aniso, aniso_colloc_ceed, NULL));
157 
158   PetscCallCeed(ceed, CeedOperatorApply(op_colloc, CEED_VECTOR_NONE, *aniso_colloc_ceed, CEED_REQUEST_IMMEDIATE));
159 
160   PetscCallCeed(ceed, CeedQFunctionDestroy(&qf_colloc));
161   PetscCallCeed(ceed, CeedOperatorDestroy(&op_colloc));
162   PetscFunctionReturn(PETSC_SUCCESS);
163 }
164