xref: /libCEED/examples/fluids/src/grid_anisotropy_tensor.c (revision 7fc69c15a53c3757dd2d5c4ddc1ca9173ff47b54)
1 // Copyright (c) 2017-2023, Lawrence Livermore National Security, LLC and other CEED contributors.
2 // All Rights Reserved. See the top-level LICENSE and NOTICE files for details.
3 //
4 // SPDX-License-Identifier: BSD-2-Clause
5 //
6 // This file is part of CEED:  http://github.com/ceed
7 
8 #include "../qfunctions/grid_anisotropy_tensor.h"
9 
10 #include <petscdmplex.h>
11 
12 #include "../navierstokes.h"
13 
14 PetscErrorCode GridAnisotropyTensorProjectionSetupApply(Ceed ceed, User user, CeedData ceed_data, CeedElemRestriction *elem_restr_grid_aniso,
15                                                         CeedVector *grid_aniso_vector) {
16   NodalProjectionData  grid_aniso_proj;
17   OperatorApplyContext mass_matop_ctx, l2_rhs_ctx;
18   CeedOperator         op_rhs_assemble, op_mass;
19   CeedQFunction        qf_rhs_assemble, qf_mass;
20   CeedBasis            basis_grid_aniso;
21   CeedInt              q_data_size;
22   MPI_Comm             comm = PetscObjectComm((PetscObject)user->dm);
23   KSP                  ksp;
24 
25   PetscFunctionBeginUser;
26   PetscCall(PetscNew(&grid_aniso_proj));
27 
28   // -- Create DM for Anisotropic tensor L^2 projection
29   grid_aniso_proj->num_comp = 7;
30   PetscCall(DMClone(user->dm, &grid_aniso_proj->dm));
31   PetscCall(PetscObjectSetName((PetscObject)grid_aniso_proj->dm, "Grid Anisotropy Tensor Projection"));
32 
33   {  // -- Setup DM
34     PetscSection section;
35     PetscCall(DMSetupByOrder_FEM(PETSC_TRUE, PETSC_TRUE, user->app_ctx->degree, 1, user->app_ctx->q_extra, 1, &grid_aniso_proj->num_comp,
36                                  grid_aniso_proj->dm));
37 
38     PetscCall(DMGetLocalSection(grid_aniso_proj->dm, &section));
39     PetscCall(PetscSectionSetFieldName(section, 0, ""));
40     PetscCall(PetscSectionSetComponentName(section, 0, 0, "KMGridAnisotropyTensorXX"));
41     PetscCall(PetscSectionSetComponentName(section, 0, 1, "KMGridAnisotropyTensorYY"));
42     PetscCall(PetscSectionSetComponentName(section, 0, 2, "KMGridAnisotropyTensorZZ"));
43     PetscCall(PetscSectionSetComponentName(section, 0, 3, "KMGridAnisotropyTensorYZ"));
44     PetscCall(PetscSectionSetComponentName(section, 0, 4, "KMGridAnisotropyTensorXZ"));
45     PetscCall(PetscSectionSetComponentName(section, 0, 5, "KMGridAnisotropyTensorXY"));
46     PetscCall(PetscSectionSetComponentName(section, 0, 6, "GridAnisotropyTensorFrobNorm"));
47   }
48 
49   // -- Get Pre-requisite things
50   PetscCallCeed(ceed, CeedElemRestrictionGetNumComponents(ceed_data->elem_restr_qd_i, &q_data_size));
51 
52   PetscCall(GetRestrictionForDomain(ceed, grid_aniso_proj->dm, 0, 0, 0, 0, -1, grid_aniso_proj->num_comp, elem_restr_grid_aniso, NULL, NULL));
53   PetscCall(CreateBasisFromPlex(ceed, grid_aniso_proj->dm, 0, 0, 0, 0, &basis_grid_aniso));
54 
55   // -- Build RHS operator
56   PetscCallCeed(ceed, CeedQFunctionCreateInterior(ceed, 1, AnisotropyTensorProjection, AnisotropyTensorProjection_loc, &qf_rhs_assemble));
57   PetscCallCeed(ceed, CeedQFunctionAddInput(qf_rhs_assemble, "qdata", q_data_size, CEED_EVAL_NONE));
58   PetscCallCeed(ceed, CeedQFunctionAddOutput(qf_rhs_assemble, "v", grid_aniso_proj->num_comp, CEED_EVAL_INTERP));
59 
60   PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_rhs_assemble, NULL, NULL, &op_rhs_assemble));
61   PetscCallCeed(ceed, CeedOperatorSetField(op_rhs_assemble, "qdata", ceed_data->elem_restr_qd_i, CEED_BASIS_COLLOCATED, ceed_data->q_data));
62   PetscCallCeed(ceed, CeedOperatorSetField(op_rhs_assemble, "v", *elem_restr_grid_aniso, basis_grid_aniso, CEED_VECTOR_ACTIVE));
63 
64   PetscCall(OperatorApplyContextCreate(user->dm, grid_aniso_proj->dm, ceed, op_rhs_assemble, CEED_VECTOR_NONE, NULL, NULL, NULL, &l2_rhs_ctx));
65 
66   // -- Build Mass Operator
67   PetscCall(CreateMassQFunction(ceed, grid_aniso_proj->num_comp, q_data_size, &qf_mass));
68   PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_mass, NULL, NULL, &op_mass));
69   PetscCallCeed(ceed, CeedOperatorSetField(op_mass, "u", *elem_restr_grid_aniso, basis_grid_aniso, CEED_VECTOR_ACTIVE));
70   PetscCallCeed(ceed, CeedOperatorSetField(op_mass, "qdata", ceed_data->elem_restr_qd_i, CEED_BASIS_COLLOCATED, ceed_data->q_data));
71   PetscCallCeed(ceed, CeedOperatorSetField(op_mass, "v", *elem_restr_grid_aniso, basis_grid_aniso, CEED_VECTOR_ACTIVE));
72 
73   {  // -- Setup KSP for L^2 projection
74     Mat mat_mass;
75     PetscCall(OperatorApplyContextCreate(grid_aniso_proj->dm, grid_aniso_proj->dm, ceed, op_mass, NULL, NULL, NULL, NULL, &mass_matop_ctx));
76     PetscCall(CreateMatShell_Ceed(mass_matop_ctx, &mat_mass));
77 
78     PetscCall(KSPCreate(comm, &ksp));
79     PetscCall(KSPSetOptionsPrefix(ksp, "grid_anisotropy_tensor_projection_"));
80     {
81       PC pc;
82       PetscCall(KSPGetPC(ksp, &pc));
83       PetscCall(PCSetType(pc, PCJACOBI));
84       PetscCall(PCJacobiSetType(pc, PC_JACOBI_DIAGONAL));
85       PetscCall(KSPSetType(ksp, KSPCG));
86       PetscCall(KSPSetNormType(ksp, KSP_NORM_NATURAL));
87       PetscCall(KSPSetTolerances(ksp, 1e-10, PETSC_DEFAULT, PETSC_DEFAULT, PETSC_DEFAULT));
88     }
89     PetscCall(KSPSetOperators(ksp, mat_mass, mat_mass));
90     PetscCall(KSPSetFromOptions(ksp));
91   }
92 
93   {  // -- Project anisotropy data and store in CeedVector
94     Vec Grid_Anisotropy, grid_anisotropy_loc;
95 
96     // Get L^2 Projection RHS
97     PetscCall(DMGetGlobalVector(grid_aniso_proj->dm, &Grid_Anisotropy));
98 
99     PetscCall(ApplyCeedOperatorLocalToGlobal(NULL, Grid_Anisotropy, l2_rhs_ctx));
100 
101     // Solve projection problem
102     PetscCall(KSPSolve(ksp, Grid_Anisotropy, Grid_Anisotropy));
103 
104     // Copy anisotropy tensor data to CeedVector
105     PetscCall(DMGetLocalVector(grid_aniso_proj->dm, &grid_anisotropy_loc));
106     PetscCallCeed(ceed, CeedElemRestrictionCreateVector(*elem_restr_grid_aniso, grid_aniso_vector, NULL));
107     PetscCall(DMGlobalToLocal(grid_aniso_proj->dm, Grid_Anisotropy, INSERT_VALUES, grid_anisotropy_loc));
108     PetscCall(VecCopyP2C(grid_anisotropy_loc, *grid_aniso_vector));
109     PetscCall(DMRestoreLocalVector(grid_aniso_proj->dm, &grid_anisotropy_loc));
110     PetscCall(DMRestoreGlobalVector(grid_aniso_proj->dm, &Grid_Anisotropy));
111   }
112 
113   // -- Cleanup
114   PetscCall(NodalProjectionDataDestroy(grid_aniso_proj));
115   PetscCall(OperatorApplyContextDestroy(l2_rhs_ctx));
116   PetscCall(OperatorApplyContextDestroy(mass_matop_ctx));
117   PetscCallCeed(ceed, CeedQFunctionDestroy(&qf_rhs_assemble));
118   PetscCallCeed(ceed, CeedQFunctionDestroy(&qf_mass));
119   PetscCallCeed(ceed, CeedBasisDestroy(&basis_grid_aniso));
120   PetscCallCeed(ceed, CeedOperatorDestroy(&op_rhs_assemble));
121   PetscCallCeed(ceed, CeedOperatorDestroy(&op_mass));
122   PetscCall(KSPDestroy(&ksp));
123   PetscFunctionReturn(PETSC_SUCCESS);
124 }
125 
126 PetscErrorCode GridAnisotropyTensorCalculateCollocatedVector(Ceed ceed, User user, CeedData ceed_data, CeedElemRestriction *elem_restr_grid_aniso,
127                                                              CeedVector *aniso_colloc_ceed, PetscInt *num_comp_aniso) {
128   CeedInt       q_data_size, num_nodes;
129   CeedQFunction qf_colloc;
130   CeedOperator  op_colloc;
131 
132   PetscFunctionBeginUser;
133   *num_comp_aniso = 7;
134   PetscCallCeed(ceed, CeedBasisGetNumNodes(ceed_data->basis_q, &num_nodes));
135   PetscCallCeed(ceed, CeedElemRestrictionGetNumComponents(ceed_data->elem_restr_qd_i, &q_data_size));
136   PetscCall(GetRestrictionForDomain(ceed, user->dm, 0, 0, 0, 0, num_nodes, *num_comp_aniso, NULL, NULL, elem_restr_grid_aniso));
137 
138   // -- Build collocation operator
139   PetscCallCeed(ceed, CeedQFunctionCreateInterior(ceed, 1, AnisotropyTensorCollocate, AnisotropyTensorCollocate_loc, &qf_colloc));
140   PetscCallCeed(ceed, CeedQFunctionAddInput(qf_colloc, "qdata", q_data_size, CEED_EVAL_NONE));
141   PetscCallCeed(ceed, CeedQFunctionAddOutput(qf_colloc, "v", *num_comp_aniso, CEED_EVAL_NONE));
142 
143   PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_colloc, NULL, NULL, &op_colloc));
144   PetscCallCeed(ceed, CeedOperatorSetField(op_colloc, "qdata", ceed_data->elem_restr_qd_i, CEED_BASIS_COLLOCATED, ceed_data->q_data));
145   PetscCallCeed(ceed, CeedOperatorSetField(op_colloc, "v", *elem_restr_grid_aniso, CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE));
146 
147   PetscCallCeed(ceed, CeedElemRestrictionCreateVector(*elem_restr_grid_aniso, aniso_colloc_ceed, NULL));
148 
149   PetscCallCeed(ceed, CeedOperatorApply(op_colloc, CEED_VECTOR_NONE, *aniso_colloc_ceed, CEED_REQUEST_IMMEDIATE));
150 
151   PetscCallCeed(ceed, CeedQFunctionDestroy(&qf_colloc));
152   PetscCallCeed(ceed, CeedOperatorDestroy(&op_colloc));
153   PetscFunctionReturn(PETSC_SUCCESS);
154 }
155