xref: /libCEED/examples/fluids/src/setuplibceed.c (revision 2fe7aee7a837446ac12fe008ea12313e81769bbb)
177841947SLeila Ghaffari // Copyright (c) 2017, Lawrence Livermore National Security, LLC. Produced at
277841947SLeila Ghaffari // the Lawrence Livermore National Laboratory. LLNL-CODE-734707. All Rights
377841947SLeila Ghaffari // reserved. See files LICENSE and NOTICE for details.
477841947SLeila Ghaffari //
577841947SLeila Ghaffari // This file is part of CEED, a collection of benchmarks, miniapps, software
677841947SLeila Ghaffari // libraries and APIs for efficient high-order finite element and spectral
777841947SLeila Ghaffari // element discretizations for exascale applications. For more information and
877841947SLeila Ghaffari // source code availability see http://github.com/ceed.
977841947SLeila Ghaffari //
1077841947SLeila Ghaffari // The CEED research is supported by the Exascale Computing Project 17-SC-20-SC,
1177841947SLeila Ghaffari // a collaborative effort of two U.S. Department of Energy organizations (Office
1277841947SLeila Ghaffari // of Science and the National Nuclear Security Administration) responsible for
1377841947SLeila Ghaffari // the planning and preparation of a capable exascale ecosystem, including
1477841947SLeila Ghaffari // software, applications, hardware, advanced system engineering and early
1577841947SLeila Ghaffari // testbed platforms, in support of the nation's exascale computing imperative.
1677841947SLeila Ghaffari 
1777841947SLeila Ghaffari /// @file
1877841947SLeila Ghaffari /// Setup libCEED for Navier-Stokes example using PETSc
1977841947SLeila Ghaffari 
2077841947SLeila Ghaffari #include "../navierstokes.h"
2177841947SLeila Ghaffari 
2277841947SLeila Ghaffari // Utility function - essential BC dofs are encoded in closure indices as -(i+1).
2377841947SLeila Ghaffari PetscInt Involute(PetscInt i) {
2477841947SLeila Ghaffari   return i >= 0 ? i : -(i+1);
2577841947SLeila Ghaffari }
2677841947SLeila Ghaffari 
2777841947SLeila Ghaffari // Utility function to create local CEED restriction
287ed3e4cdSJeremy L Thompson PetscErrorCode CreateRestrictionFromPlex(Ceed ceed, DM dm, CeedInt height,
297ed3e4cdSJeremy L Thompson     DMLabel domain_label, CeedInt value, CeedElemRestriction *elem_restr) {
307ed3e4cdSJeremy L Thompson   PetscInt num_elem, elem_size, num_dof, num_comp, *elem_restr_offsets;
3177841947SLeila Ghaffari   PetscErrorCode ierr;
327ed3e4cdSJeremy L Thompson 
3377841947SLeila Ghaffari   PetscFunctionBeginUser;
347ed3e4cdSJeremy L Thompson   ierr = DMPlexGetLocalOffsets(dm, domain_label, value, height, 0, &num_elem,
357ed3e4cdSJeremy L Thompson                                &elem_size, &num_comp, &num_dof, &elem_restr_offsets);
367ed3e4cdSJeremy L Thompson   CHKERRQ(ierr);
3777841947SLeila Ghaffari 
387ed3e4cdSJeremy L Thompson   CeedElemRestrictionCreate(ceed, num_elem, elem_size, num_comp,
397ed3e4cdSJeremy L Thompson                             1, num_dof, CEED_MEM_HOST, CEED_COPY_VALUES,
407ed3e4cdSJeremy L Thompson                             elem_restr_offsets, elem_restr);
417ed3e4cdSJeremy L Thompson   ierr = PetscFree(elem_restr_offsets); CHKERRQ(ierr);
4277841947SLeila Ghaffari 
4377841947SLeila Ghaffari   PetscFunctionReturn(0);
4477841947SLeila Ghaffari }
4577841947SLeila Ghaffari 
4677841947SLeila Ghaffari // Utility function to get Ceed Restriction for each domain
4777841947SLeila Ghaffari PetscErrorCode GetRestrictionForDomain(Ceed ceed, DM dm, CeedInt height,
4877841947SLeila Ghaffari                                        DMLabel domain_label, PetscInt value,
497ed3e4cdSJeremy L Thompson                                        CeedInt Q, CeedInt q_data_size,
5077841947SLeila Ghaffari                                        CeedElemRestriction *elem_restr_q,
5177841947SLeila Ghaffari                                        CeedElemRestriction *elem_restr_x,
5277841947SLeila Ghaffari                                        CeedElemRestriction *elem_restr_qd_i) {
5377841947SLeila Ghaffari   DM             dm_coord;
5477841947SLeila Ghaffari   CeedInt        dim, loc_num_elem;
5577841947SLeila Ghaffari   CeedInt        Q_dim;
5677841947SLeila Ghaffari   PetscErrorCode ierr;
5777841947SLeila Ghaffari   PetscFunctionBeginUser;
5877841947SLeila Ghaffari 
5977841947SLeila Ghaffari   ierr = DMGetDimension(dm, &dim); CHKERRQ(ierr);
6077841947SLeila Ghaffari   dim -= height;
6177841947SLeila Ghaffari   Q_dim = CeedIntPow(Q, dim);
6277841947SLeila Ghaffari   ierr = DMGetCoordinateDM(dm, &dm_coord); CHKERRQ(ierr);
6377841947SLeila Ghaffari   ierr = DMPlexSetClosurePermutationTensor(dm_coord, PETSC_DETERMINE, NULL);
6477841947SLeila Ghaffari   CHKERRQ(ierr);
657ed3e4cdSJeremy L Thompson   ierr = CreateRestrictionFromPlex(ceed, dm, height, domain_label, value,
667ed3e4cdSJeremy L Thompson                                    elem_restr_q);
677ed3e4cdSJeremy L Thompson   CHKERRQ(ierr);
687ed3e4cdSJeremy L Thompson   ierr = CreateRestrictionFromPlex(ceed, dm_coord, height, domain_label, value,
697ed3e4cdSJeremy L Thompson                                    elem_restr_x);
707ed3e4cdSJeremy L Thompson   CHKERRQ(ierr);
7177841947SLeila Ghaffari   CeedElemRestrictionGetNumElements(*elem_restr_q, &loc_num_elem);
7277841947SLeila Ghaffari   CeedElemRestrictionCreateStrided(ceed, loc_num_elem, Q_dim,
7377841947SLeila Ghaffari                                    q_data_size, q_data_size*loc_num_elem*Q_dim,
7477841947SLeila Ghaffari                                    CEED_STRIDES_BACKEND, elem_restr_qd_i);
7577841947SLeila Ghaffari   PetscFunctionReturn(0);
7677841947SLeila Ghaffari }
7777841947SLeila Ghaffari 
7877841947SLeila Ghaffari // Utility function to create CEED Composite Operator for the entire domain
7977841947SLeila Ghaffari PetscErrorCode CreateOperatorForDomain(Ceed ceed, DM dm, SimpleBC bc,
8077841947SLeila Ghaffari                                        CeedData ceed_data, Physics phys,
8177841947SLeila Ghaffari                                        CeedOperator op_apply_vol, CeedInt height,
8277841947SLeila Ghaffari                                        CeedInt P_sur, CeedInt Q_sur, CeedInt q_data_size_sur,
8377841947SLeila Ghaffari                                        CeedOperator *op_apply) {
84*2fe7aee7SLeila Ghaffari   //CeedInt        dim;
8577841947SLeila Ghaffari   DMLabel        domain_label;
8677841947SLeila Ghaffari   PetscErrorCode ierr;
8777841947SLeila Ghaffari   PetscFunctionBeginUser;
8877841947SLeila Ghaffari 
8977841947SLeila Ghaffari   // Create Composite Operaters
9077841947SLeila Ghaffari   CeedCompositeOperatorCreate(ceed, op_apply);
9177841947SLeila Ghaffari 
9277841947SLeila Ghaffari   // --Apply Sub-Operator for the volume
9377841947SLeila Ghaffari   CeedCompositeOperatorAddSub(*op_apply, op_apply_vol);
9477841947SLeila Ghaffari 
9577841947SLeila Ghaffari   // -- Create Sub-Operator for in/outflow BCs
96e6225c47SLeila Ghaffari   if (phys->has_neumann) {
9777841947SLeila Ghaffari     // --- Setup
9877841947SLeila Ghaffari     ierr = DMGetLabel(dm, "Face Sets", &domain_label); CHKERRQ(ierr);
99*2fe7aee7SLeila Ghaffari     //ierr = DMGetDimension(dm, &dim); CHKERRQ(ierr);
10077841947SLeila Ghaffari 
10177841947SLeila Ghaffari     // --- Get number of quadrature points for the boundaries
10277841947SLeila Ghaffari     CeedInt num_qpts_sur;
10377841947SLeila Ghaffari     CeedBasisGetNumQuadraturePoints(ceed_data->basis_q_sur, &num_qpts_sur);
10477841947SLeila Ghaffari 
105*2fe7aee7SLeila Ghaffari     // --- Create Sub-Operator for inflow boundaries
106*2fe7aee7SLeila Ghaffari     for (CeedInt i=0; i < bc->num_inflow; i++) {
10777841947SLeila Ghaffari       CeedVector          q_data_sur;
108*2fe7aee7SLeila Ghaffari       CeedOperator        op_setup_sur, op_apply_inflow;
109*2fe7aee7SLeila Ghaffari       CeedElemRestriction elem_restr_x_sur, elem_restr_q_sur, elem_restr_qd_i_sur;
11077841947SLeila Ghaffari 
11177841947SLeila Ghaffari       // ---- CEED Restriction
112*2fe7aee7SLeila Ghaffari       ierr = GetRestrictionForDomain(ceed, dm, height, domain_label, bc->inflows[i],
113*2fe7aee7SLeila Ghaffari                                      Q_sur, q_data_size_sur, &elem_restr_q_sur, &elem_restr_x_sur,
114*2fe7aee7SLeila Ghaffari                                      &elem_restr_qd_i_sur);
11577841947SLeila Ghaffari       CHKERRQ(ierr);
11677841947SLeila Ghaffari 
11777841947SLeila Ghaffari       // ---- CEED Vector
11877841947SLeila Ghaffari       PetscInt loc_num_elem_sur;
11977841947SLeila Ghaffari       CeedElemRestrictionGetNumElements(elem_restr_q_sur, &loc_num_elem_sur);
12077841947SLeila Ghaffari       CeedVectorCreate(ceed, q_data_size_sur*loc_num_elem_sur*num_qpts_sur,
12177841947SLeila Ghaffari                        &q_data_sur);
12277841947SLeila Ghaffari 
12377841947SLeila Ghaffari       // ---- CEED Operator
12477841947SLeila Ghaffari       // ----- CEED Operator for Setup (geometric factors)
12577841947SLeila Ghaffari       CeedOperatorCreate(ceed, ceed_data->qf_setup_sur, NULL, NULL, &op_setup_sur);
12677841947SLeila Ghaffari       CeedOperatorSetField(op_setup_sur, "dx", elem_restr_x_sur,
127e6225c47SLeila Ghaffari                            ceed_data->basis_x_sur, CEED_VECTOR_ACTIVE);
12877841947SLeila Ghaffari       CeedOperatorSetField(op_setup_sur, "weight", CEED_ELEMRESTRICTION_NONE,
12977841947SLeila Ghaffari                            ceed_data->basis_x_sur, CEED_VECTOR_NONE);
130a61c78d6SJeremy L Thompson       CeedOperatorSetField(op_setup_sur, "surface qdata", elem_restr_qd_i_sur,
13177841947SLeila Ghaffari                            CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE);
13277841947SLeila Ghaffari 
13377841947SLeila Ghaffari       // ----- CEED Operator for Physics
134*2fe7aee7SLeila Ghaffari       CeedOperatorCreate(ceed, ceed_data->qf_apply_inflow, NULL, NULL,
135*2fe7aee7SLeila Ghaffari                          &op_apply_inflow);
136*2fe7aee7SLeila Ghaffari       CeedOperatorSetField(op_apply_inflow, "q", elem_restr_q_sur,
13777841947SLeila Ghaffari                            ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE);
138*2fe7aee7SLeila Ghaffari       CeedOperatorSetField(op_apply_inflow, "surface qdata", elem_restr_qd_i_sur,
13977841947SLeila Ghaffari                            CEED_BASIS_COLLOCATED, q_data_sur);
140*2fe7aee7SLeila Ghaffari       CeedOperatorSetField(op_apply_inflow, "x", elem_restr_x_sur,
14177841947SLeila Ghaffari                            ceed_data->basis_x_sur, ceed_data->x_coord);
142*2fe7aee7SLeila Ghaffari       CeedOperatorSetField(op_apply_inflow, "v", elem_restr_q_sur,
14377841947SLeila Ghaffari                            ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE);
14477841947SLeila Ghaffari 
14577841947SLeila Ghaffari       // ----- Apply CEED operator for Setup
14677841947SLeila Ghaffari       CeedOperatorApply(op_setup_sur, ceed_data->x_coord, q_data_sur,
14777841947SLeila Ghaffari                         CEED_REQUEST_IMMEDIATE);
14877841947SLeila Ghaffari 
149*2fe7aee7SLeila Ghaffari       // ----- Apply Sub-Operator for Physics
150*2fe7aee7SLeila Ghaffari       CeedCompositeOperatorAddSub(*op_apply, op_apply_inflow);
15177841947SLeila Ghaffari 
15277841947SLeila Ghaffari       // ----- Cleanup
15377841947SLeila Ghaffari       CeedVectorDestroy(&q_data_sur);
15477841947SLeila Ghaffari       CeedElemRestrictionDestroy(&elem_restr_q_sur);
15577841947SLeila Ghaffari       CeedElemRestrictionDestroy(&elem_restr_x_sur);
15677841947SLeila Ghaffari       CeedElemRestrictionDestroy(&elem_restr_qd_i_sur);
15777841947SLeila Ghaffari       CeedOperatorDestroy(&op_setup_sur);
158*2fe7aee7SLeila Ghaffari       CeedOperatorDestroy(&op_apply_inflow);
15977841947SLeila Ghaffari     }
16077841947SLeila Ghaffari 
161*2fe7aee7SLeila Ghaffari     // --- Create Sub-Operator for outflow boundaries
162*2fe7aee7SLeila Ghaffari     for (CeedInt i=0; i < bc->num_outflow; i++) {
163*2fe7aee7SLeila Ghaffari       CeedVector          q_data_sur;
164*2fe7aee7SLeila Ghaffari       CeedOperator        op_setup_sur, op_apply_outflow;
165*2fe7aee7SLeila Ghaffari       CeedElemRestriction elem_restr_x_sur, elem_restr_q_sur, elem_restr_qd_i_sur;
166*2fe7aee7SLeila Ghaffari 
167*2fe7aee7SLeila Ghaffari       // ---- CEED Restriction
168*2fe7aee7SLeila Ghaffari       ierr = GetRestrictionForDomain(ceed, dm, height, domain_label, bc->outflows[i],
169*2fe7aee7SLeila Ghaffari                                      Q_sur, q_data_size_sur, &elem_restr_q_sur, &elem_restr_x_sur,
170*2fe7aee7SLeila Ghaffari                                      &elem_restr_qd_i_sur);
171*2fe7aee7SLeila Ghaffari       CHKERRQ(ierr);
172*2fe7aee7SLeila Ghaffari 
173*2fe7aee7SLeila Ghaffari       // ---- CEED Vector
174*2fe7aee7SLeila Ghaffari       PetscInt loc_num_elem_sur;
175*2fe7aee7SLeila Ghaffari       CeedElemRestrictionGetNumElements(elem_restr_q_sur, &loc_num_elem_sur);
176*2fe7aee7SLeila Ghaffari       CeedVectorCreate(ceed, q_data_size_sur*loc_num_elem_sur*num_qpts_sur,
177*2fe7aee7SLeila Ghaffari                        &q_data_sur);
178*2fe7aee7SLeila Ghaffari 
179*2fe7aee7SLeila Ghaffari       // ---- CEED Operator
180*2fe7aee7SLeila Ghaffari       // ----- CEED Operator for Setup (geometric factors)
181*2fe7aee7SLeila Ghaffari       CeedOperatorCreate(ceed, ceed_data->qf_setup_sur, NULL, NULL, &op_setup_sur);
182*2fe7aee7SLeila Ghaffari       CeedOperatorSetField(op_setup_sur, "dx", elem_restr_x_sur,
183*2fe7aee7SLeila Ghaffari                            ceed_data->basis_x_sur, CEED_VECTOR_ACTIVE);
184*2fe7aee7SLeila Ghaffari       CeedOperatorSetField(op_setup_sur, "weight", CEED_ELEMRESTRICTION_NONE,
185*2fe7aee7SLeila Ghaffari                            ceed_data->basis_x_sur, CEED_VECTOR_NONE);
186*2fe7aee7SLeila Ghaffari       CeedOperatorSetField(op_setup_sur, "surface qdata", elem_restr_qd_i_sur,
187*2fe7aee7SLeila Ghaffari                            CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE);
188*2fe7aee7SLeila Ghaffari 
189*2fe7aee7SLeila Ghaffari       // ----- CEED Operator for Physics
190*2fe7aee7SLeila Ghaffari       CeedOperatorCreate(ceed, ceed_data->qf_apply_outflow, NULL, NULL,
191*2fe7aee7SLeila Ghaffari                          &op_apply_outflow);
192*2fe7aee7SLeila Ghaffari       CeedOperatorSetField(op_apply_outflow, "q", elem_restr_q_sur,
193*2fe7aee7SLeila Ghaffari                            ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE);
194*2fe7aee7SLeila Ghaffari       CeedOperatorSetField(op_apply_outflow, "surface qdata", elem_restr_qd_i_sur,
195*2fe7aee7SLeila Ghaffari                            CEED_BASIS_COLLOCATED, q_data_sur);
196*2fe7aee7SLeila Ghaffari       CeedOperatorSetField(op_apply_outflow, "x", elem_restr_x_sur,
197*2fe7aee7SLeila Ghaffari                            ceed_data->basis_x_sur, ceed_data->x_coord);
198*2fe7aee7SLeila Ghaffari       CeedOperatorSetField(op_apply_outflow, "v", elem_restr_q_sur,
199*2fe7aee7SLeila Ghaffari                            ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE);
200*2fe7aee7SLeila Ghaffari 
201*2fe7aee7SLeila Ghaffari       // ----- Apply CEED operator for Setup
202*2fe7aee7SLeila Ghaffari       CeedOperatorApply(op_setup_sur, ceed_data->x_coord, q_data_sur,
203*2fe7aee7SLeila Ghaffari                         CEED_REQUEST_IMMEDIATE);
204*2fe7aee7SLeila Ghaffari 
205*2fe7aee7SLeila Ghaffari       // ----- Apply Sub-Operator for Physics
206*2fe7aee7SLeila Ghaffari       CeedCompositeOperatorAddSub(*op_apply, op_apply_outflow);
207*2fe7aee7SLeila Ghaffari 
208*2fe7aee7SLeila Ghaffari       // ----- Cleanup
209*2fe7aee7SLeila Ghaffari       CeedVectorDestroy(&q_data_sur);
210*2fe7aee7SLeila Ghaffari       CeedElemRestrictionDestroy(&elem_restr_q_sur);
211*2fe7aee7SLeila Ghaffari       CeedElemRestrictionDestroy(&elem_restr_x_sur);
212*2fe7aee7SLeila Ghaffari       CeedElemRestrictionDestroy(&elem_restr_qd_i_sur);
213*2fe7aee7SLeila Ghaffari       CeedOperatorDestroy(&op_setup_sur);
214*2fe7aee7SLeila Ghaffari       CeedOperatorDestroy(&op_apply_outflow);
215*2fe7aee7SLeila Ghaffari     }
216*2fe7aee7SLeila Ghaffari   }
21777841947SLeila Ghaffari   PetscFunctionReturn(0);
21877841947SLeila Ghaffari }
21977841947SLeila Ghaffari 
22077841947SLeila Ghaffari PetscErrorCode SetupLibceed(Ceed ceed, CeedData ceed_data, DM dm, User user,
22177841947SLeila Ghaffari                             AppCtx app_ctx, ProblemData *problem, SimpleBC bc) {
22277841947SLeila Ghaffari   PetscErrorCode ierr;
22377841947SLeila Ghaffari   PetscFunctionBeginUser;
22477841947SLeila Ghaffari 
22577841947SLeila Ghaffari   // *****************************************************************************
22677841947SLeila Ghaffari   // Set up CEED objects for the interior domain (volume)
22777841947SLeila Ghaffari   // *****************************************************************************
22877841947SLeila Ghaffari   const PetscInt num_comp_q      = 5;
22977841947SLeila Ghaffari   const CeedInt  dim             = problem->dim,
23077841947SLeila Ghaffari                  num_comp_x      = problem->dim,
23177841947SLeila Ghaffari                  q_data_size_vol = problem->q_data_size_vol,
23277841947SLeila Ghaffari                  P               = app_ctx->degree + 1,
23377841947SLeila Ghaffari                  Q               = P + app_ctx->q_extra;
23477841947SLeila Ghaffari 
23577841947SLeila Ghaffari   // -----------------------------------------------------------------------------
23677841947SLeila Ghaffari   // CEED Bases
23777841947SLeila Ghaffari   // -----------------------------------------------------------------------------
23877841947SLeila Ghaffari   CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_q, P, Q, CEED_GAUSS,
23977841947SLeila Ghaffari                                   &ceed_data->basis_q);
24077841947SLeila Ghaffari   CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_x, 2, Q, CEED_GAUSS,
24177841947SLeila Ghaffari                                   &ceed_data->basis_x);
24277841947SLeila Ghaffari   CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_x, 2, P,
24377841947SLeila Ghaffari                                   CEED_GAUSS_LOBATTO, &ceed_data->basis_xc);
24477841947SLeila Ghaffari 
24577841947SLeila Ghaffari   // -----------------------------------------------------------------------------
24677841947SLeila Ghaffari   // CEED Restrictions
24777841947SLeila Ghaffari   // -----------------------------------------------------------------------------
24877841947SLeila Ghaffari   // -- Create restriction
2497ed3e4cdSJeremy L Thompson   ierr = GetRestrictionForDomain(ceed, dm, 0, 0, 0, Q, q_data_size_vol,
2507ed3e4cdSJeremy L Thompson                                  &ceed_data->elem_restr_q, &ceed_data->elem_restr_x,
25177841947SLeila Ghaffari                                  &ceed_data->elem_restr_qd_i); CHKERRQ(ierr);
25277841947SLeila Ghaffari   // -- Create E vectors
25377841947SLeila Ghaffari   CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->q_ceed, NULL);
25477841947SLeila Ghaffari   CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->q_dot_ceed,
25577841947SLeila Ghaffari                                   NULL);
25677841947SLeila Ghaffari   CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->g_ceed, NULL);
25777841947SLeila Ghaffari 
25877841947SLeila Ghaffari   // -----------------------------------------------------------------------------
25977841947SLeila Ghaffari   // CEED QFunctions
26077841947SLeila Ghaffari   // -----------------------------------------------------------------------------
26177841947SLeila Ghaffari   // -- Create QFunction for quadrature data
26277841947SLeila Ghaffari   CeedQFunctionCreateInterior(ceed, 1, problem->setup_vol, problem->setup_vol_loc,
26377841947SLeila Ghaffari                               &ceed_data->qf_setup_vol);
26477841947SLeila Ghaffari   CeedQFunctionAddInput(ceed_data->qf_setup_vol, "dx", num_comp_x*dim,
26577841947SLeila Ghaffari                         CEED_EVAL_GRAD);
26677841947SLeila Ghaffari   CeedQFunctionAddInput(ceed_data->qf_setup_vol, "weight", 1, CEED_EVAL_WEIGHT);
267a61c78d6SJeremy L Thompson   CeedQFunctionAddOutput(ceed_data->qf_setup_vol, "qdata", q_data_size_vol,
26877841947SLeila Ghaffari                          CEED_EVAL_NONE);
26977841947SLeila Ghaffari 
27077841947SLeila Ghaffari   // -- Create QFunction for ICs
27177841947SLeila Ghaffari   CeedQFunctionCreateInterior(ceed, 1, problem->ics, problem->ics_loc,
27277841947SLeila Ghaffari                               &ceed_data->qf_ics);
27377841947SLeila Ghaffari   CeedQFunctionAddInput(ceed_data->qf_ics, "x", num_comp_x, CEED_EVAL_INTERP);
27477841947SLeila Ghaffari   CeedQFunctionAddOutput(ceed_data->qf_ics, "q0", num_comp_q, CEED_EVAL_NONE);
27577841947SLeila Ghaffari 
27677841947SLeila Ghaffari   // -- Create QFunction for RHS
27777841947SLeila Ghaffari   if (problem->apply_vol_rhs) {
27877841947SLeila Ghaffari     CeedQFunctionCreateInterior(ceed, 1, problem->apply_vol_rhs,
27977841947SLeila Ghaffari                                 problem->apply_vol_rhs_loc, &ceed_data->qf_rhs_vol);
28077841947SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "q", num_comp_q, CEED_EVAL_INTERP);
28177841947SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "dq", num_comp_q*dim,
28277841947SLeila Ghaffari                           CEED_EVAL_GRAD);
283a61c78d6SJeremy L Thompson     CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "qdata", q_data_size_vol,
28477841947SLeila Ghaffari                           CEED_EVAL_NONE);
28577841947SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "x", num_comp_x, CEED_EVAL_INTERP);
28677841947SLeila Ghaffari     CeedQFunctionAddOutput(ceed_data->qf_rhs_vol, "v", num_comp_q,
28777841947SLeila Ghaffari                            CEED_EVAL_INTERP);
28877841947SLeila Ghaffari     CeedQFunctionAddOutput(ceed_data->qf_rhs_vol, "dv", num_comp_q*dim,
28977841947SLeila Ghaffari                            CEED_EVAL_GRAD);
29077841947SLeila Ghaffari   }
29177841947SLeila Ghaffari 
29277841947SLeila Ghaffari   // -- Create QFunction for IFunction
29377841947SLeila Ghaffari   if (problem->apply_vol_ifunction) {
29477841947SLeila Ghaffari     CeedQFunctionCreateInterior(ceed, 1, problem->apply_vol_ifunction,
29577841947SLeila Ghaffari                                 problem->apply_vol_ifunction_loc, &ceed_data->qf_ifunction_vol);
29677841947SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "q", num_comp_q,
29777841947SLeila Ghaffari                           CEED_EVAL_INTERP);
29877841947SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "dq", num_comp_q*dim,
29977841947SLeila Ghaffari                           CEED_EVAL_GRAD);
300a61c78d6SJeremy L Thompson     CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "q dot", num_comp_q,
30177841947SLeila Ghaffari                           CEED_EVAL_INTERP);
302a61c78d6SJeremy L Thompson     CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "qdata", q_data_size_vol,
30377841947SLeila Ghaffari                           CEED_EVAL_NONE);
30477841947SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "x", num_comp_x,
30577841947SLeila Ghaffari                           CEED_EVAL_INTERP);
30677841947SLeila Ghaffari     CeedQFunctionAddOutput(ceed_data->qf_ifunction_vol, "v", num_comp_q,
30777841947SLeila Ghaffari                            CEED_EVAL_INTERP);
30877841947SLeila Ghaffari     CeedQFunctionAddOutput(ceed_data->qf_ifunction_vol, "dv", num_comp_q*dim,
30977841947SLeila Ghaffari                            CEED_EVAL_GRAD);
31077841947SLeila Ghaffari   }
31177841947SLeila Ghaffari 
31277841947SLeila Ghaffari   // ---------------------------------------------------------------------------
31377841947SLeila Ghaffari   // Element coordinates
31477841947SLeila Ghaffari   // ---------------------------------------------------------------------------
31577841947SLeila Ghaffari   // -- Create CEED vector
31677841947SLeila Ghaffari   CeedElemRestrictionCreateVector(ceed_data->elem_restr_x, &ceed_data->x_coord,
31777841947SLeila Ghaffari                                   NULL);
31877841947SLeila Ghaffari 
31977841947SLeila Ghaffari   // -- Copy PETSc vector in CEED vector
32077841947SLeila Ghaffari   Vec               X_loc;
32177841947SLeila Ghaffari   const PetscScalar *X_loc_array;
32277841947SLeila Ghaffari   ierr = DMGetCoordinatesLocal(dm, &X_loc); CHKERRQ(ierr);
3231864f1c2SLeila Ghaffari   ierr = VecScale(X_loc, problem->dm_scale); CHKERRQ(ierr);
32477841947SLeila Ghaffari   ierr = VecGetArrayRead(X_loc, &X_loc_array); CHKERRQ(ierr);
32577841947SLeila Ghaffari   CeedVectorSetArray(ceed_data->x_coord, CEED_MEM_HOST, CEED_COPY_VALUES,
32677841947SLeila Ghaffari                      (PetscScalar *)X_loc_array);
32777841947SLeila Ghaffari   ierr = VecRestoreArrayRead(X_loc, &X_loc_array); CHKERRQ(ierr);
32877841947SLeila Ghaffari 
32977841947SLeila Ghaffari   // -----------------------------------------------------------------------------
33077841947SLeila Ghaffari   // CEED vectors
33177841947SLeila Ghaffari   // -----------------------------------------------------------------------------
33277841947SLeila Ghaffari   // -- Create CEED vector for geometric data
33377841947SLeila Ghaffari   CeedInt  num_qpts_vol;
33477841947SLeila Ghaffari   PetscInt loc_num_elem_vol;
33577841947SLeila Ghaffari   CeedBasisGetNumQuadraturePoints(ceed_data->basis_q, &num_qpts_vol);
33677841947SLeila Ghaffari   CeedElemRestrictionGetNumElements(ceed_data->elem_restr_q, &loc_num_elem_vol);
33777841947SLeila Ghaffari   CeedVectorCreate(ceed, q_data_size_vol*loc_num_elem_vol*num_qpts_vol,
33877841947SLeila Ghaffari                    &ceed_data->q_data);
33977841947SLeila Ghaffari 
34077841947SLeila Ghaffari   // -----------------------------------------------------------------------------
34177841947SLeila Ghaffari   // CEED Operators
34277841947SLeila Ghaffari   // -----------------------------------------------------------------------------
34377841947SLeila Ghaffari   // -- Create CEED operator for quadrature data
34477841947SLeila Ghaffari   CeedOperatorCreate(ceed, ceed_data->qf_setup_vol, NULL, NULL,
34577841947SLeila Ghaffari                      &ceed_data->op_setup_vol);
34677841947SLeila Ghaffari   CeedOperatorSetField(ceed_data->op_setup_vol, "dx", ceed_data->elem_restr_x,
34777841947SLeila Ghaffari                        ceed_data->basis_x, CEED_VECTOR_ACTIVE);
34877841947SLeila Ghaffari   CeedOperatorSetField(ceed_data->op_setup_vol, "weight",
349e6225c47SLeila Ghaffari                        CEED_ELEMRESTRICTION_NONE, ceed_data->basis_x, CEED_VECTOR_NONE);
350a61c78d6SJeremy L Thompson   CeedOperatorSetField(ceed_data->op_setup_vol, "qdata",
351e6225c47SLeila Ghaffari                        ceed_data->elem_restr_qd_i, CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE);
35277841947SLeila Ghaffari 
35377841947SLeila Ghaffari   // -- Create CEED operator for ICs
35477841947SLeila Ghaffari   CeedOperatorCreate(ceed, ceed_data->qf_ics, NULL, NULL, &ceed_data->op_ics);
35577841947SLeila Ghaffari   CeedOperatorSetField(ceed_data->op_ics, "x", ceed_data->elem_restr_x,
35677841947SLeila Ghaffari                        ceed_data->basis_xc, CEED_VECTOR_ACTIVE);
35777841947SLeila Ghaffari   CeedOperatorSetField(ceed_data->op_ics, "q0", ceed_data->elem_restr_q,
35877841947SLeila Ghaffari                        CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE);
35977841947SLeila Ghaffari 
36077841947SLeila Ghaffari   // Create CEED operator for RHS
36177841947SLeila Ghaffari   if (ceed_data->qf_rhs_vol) {
36277841947SLeila Ghaffari     CeedOperator op;
36377841947SLeila Ghaffari     CeedOperatorCreate(ceed, ceed_data->qf_rhs_vol, NULL, NULL, &op);
36477841947SLeila Ghaffari     CeedOperatorSetField(op, "q", ceed_data->elem_restr_q, ceed_data->basis_q,
36577841947SLeila Ghaffari                          CEED_VECTOR_ACTIVE);
36677841947SLeila Ghaffari     CeedOperatorSetField(op, "dq", ceed_data->elem_restr_q, ceed_data->basis_q,
36777841947SLeila Ghaffari                          CEED_VECTOR_ACTIVE);
368a61c78d6SJeremy L Thompson     CeedOperatorSetField(op, "qdata", ceed_data->elem_restr_qd_i,
369e6225c47SLeila Ghaffari                          CEED_BASIS_COLLOCATED, ceed_data->q_data);
37077841947SLeila Ghaffari     CeedOperatorSetField(op, "x", ceed_data->elem_restr_x, ceed_data->basis_x,
37177841947SLeila Ghaffari                          ceed_data->x_coord);
37277841947SLeila Ghaffari     CeedOperatorSetField(op, "v", ceed_data->elem_restr_q, ceed_data->basis_q,
37377841947SLeila Ghaffari                          CEED_VECTOR_ACTIVE);
37477841947SLeila Ghaffari     CeedOperatorSetField(op, "dv", ceed_data->elem_restr_q, ceed_data->basis_q,
37577841947SLeila Ghaffari                          CEED_VECTOR_ACTIVE);
37677841947SLeila Ghaffari     user->op_rhs_vol = op;
37777841947SLeila Ghaffari   }
37877841947SLeila Ghaffari 
37977841947SLeila Ghaffari   // -- CEED operator for IFunction
38077841947SLeila Ghaffari   if (ceed_data->qf_ifunction_vol) {
38177841947SLeila Ghaffari     CeedOperator op;
38277841947SLeila Ghaffari     CeedOperatorCreate(ceed, ceed_data->qf_ifunction_vol, NULL, NULL, &op);
38377841947SLeila Ghaffari     CeedOperatorSetField(op, "q", ceed_data->elem_restr_q, ceed_data->basis_q,
38477841947SLeila Ghaffari                          CEED_VECTOR_ACTIVE);
38577841947SLeila Ghaffari     CeedOperatorSetField(op, "dq", ceed_data->elem_restr_q, ceed_data->basis_q,
38677841947SLeila Ghaffari                          CEED_VECTOR_ACTIVE);
387a61c78d6SJeremy L Thompson     CeedOperatorSetField(op, "q dot", ceed_data->elem_restr_q, ceed_data->basis_q,
38877841947SLeila Ghaffari                          user->q_dot_ceed);
389a61c78d6SJeremy L Thompson     CeedOperatorSetField(op, "qdata", ceed_data->elem_restr_qd_i,
390e6225c47SLeila Ghaffari                          CEED_BASIS_COLLOCATED, ceed_data->q_data);
39177841947SLeila Ghaffari     CeedOperatorSetField(op, "x", ceed_data->elem_restr_x, ceed_data->basis_x,
39277841947SLeila Ghaffari                          ceed_data->x_coord);
39377841947SLeila Ghaffari     CeedOperatorSetField(op, "v", ceed_data->elem_restr_q, ceed_data->basis_q,
39477841947SLeila Ghaffari                          CEED_VECTOR_ACTIVE);
39577841947SLeila Ghaffari     CeedOperatorSetField(op, "dv", ceed_data->elem_restr_q, ceed_data->basis_q,
39677841947SLeila Ghaffari                          CEED_VECTOR_ACTIVE);
39777841947SLeila Ghaffari     user->op_ifunction_vol = op;
39877841947SLeila Ghaffari   }
39977841947SLeila Ghaffari 
40077841947SLeila Ghaffari   // *****************************************************************************
40177841947SLeila Ghaffari   // Set up CEED objects for the exterior domain (surface)
40277841947SLeila Ghaffari   // *****************************************************************************
40377841947SLeila Ghaffari   CeedInt height  = 1,
40477841947SLeila Ghaffari           dim_sur = dim - height,
40577841947SLeila Ghaffari           P_sur   = app_ctx->degree + 1,
40677841947SLeila Ghaffari           Q_sur   = P_sur + app_ctx->q_extra;
40777841947SLeila Ghaffari   const CeedInt q_data_size_sur = problem->q_data_size_sur;
40877841947SLeila Ghaffari 
40977841947SLeila Ghaffari   // -----------------------------------------------------------------------------
41077841947SLeila Ghaffari   // CEED Bases
41177841947SLeila Ghaffari   // -----------------------------------------------------------------------------
41277841947SLeila Ghaffari   CeedBasisCreateTensorH1Lagrange(ceed, dim_sur, num_comp_q, P_sur, Q_sur,
41377841947SLeila Ghaffari                                   CEED_GAUSS, &ceed_data->basis_q_sur);
41477841947SLeila Ghaffari   CeedBasisCreateTensorH1Lagrange(ceed, dim_sur, num_comp_x, 2, Q_sur, CEED_GAUSS,
41577841947SLeila Ghaffari                                   &ceed_data->basis_x_sur);
41677841947SLeila Ghaffari 
41777841947SLeila Ghaffari   // -----------------------------------------------------------------------------
41877841947SLeila Ghaffari   // CEED QFunctions
41977841947SLeila Ghaffari   // -----------------------------------------------------------------------------
42077841947SLeila Ghaffari   // -- Create QFunction for quadrature data
42177841947SLeila Ghaffari   CeedQFunctionCreateInterior(ceed, 1, problem->setup_sur, problem->setup_sur_loc,
42277841947SLeila Ghaffari                               &ceed_data->qf_setup_sur);
42377841947SLeila Ghaffari   CeedQFunctionAddInput(ceed_data->qf_setup_sur, "dx", num_comp_x*dim_sur,
42477841947SLeila Ghaffari                         CEED_EVAL_GRAD);
42577841947SLeila Ghaffari   CeedQFunctionAddInput(ceed_data->qf_setup_sur, "weight", 1, CEED_EVAL_WEIGHT);
426a61c78d6SJeremy L Thompson   CeedQFunctionAddOutput(ceed_data->qf_setup_sur, "surface qdata",
427*2fe7aee7SLeila Ghaffari                          q_data_size_sur, CEED_EVAL_NONE);
42877841947SLeila Ghaffari 
429*2fe7aee7SLeila Ghaffari   // -- Creat QFunction for inflow boundaries
430*2fe7aee7SLeila Ghaffari   if (problem->apply_inflow) {
431*2fe7aee7SLeila Ghaffari     CeedQFunctionCreateInterior(ceed, 1, problem->apply_inflow,
432*2fe7aee7SLeila Ghaffari                                 problem->apply_inflow_loc, &ceed_data->qf_apply_inflow);
433*2fe7aee7SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "q", num_comp_q,
43477841947SLeila Ghaffari                           CEED_EVAL_INTERP);
435*2fe7aee7SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "surface qdata",
436*2fe7aee7SLeila Ghaffari                           q_data_size_sur, CEED_EVAL_NONE);
437*2fe7aee7SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "x", num_comp_x,
43877841947SLeila Ghaffari                           CEED_EVAL_INTERP);
439*2fe7aee7SLeila Ghaffari     CeedQFunctionAddOutput(ceed_data->qf_apply_inflow, "v", num_comp_q,
440*2fe7aee7SLeila Ghaffari                            CEED_EVAL_INTERP);
441*2fe7aee7SLeila Ghaffari   }
442*2fe7aee7SLeila Ghaffari 
443*2fe7aee7SLeila Ghaffari   // -- Creat QFunction for outflow boundaries
444*2fe7aee7SLeila Ghaffari   if (problem->apply_outflow) {
445*2fe7aee7SLeila Ghaffari     CeedQFunctionCreateInterior(ceed, 1, problem->apply_outflow,
446*2fe7aee7SLeila Ghaffari                                 problem->apply_outflow_loc, &ceed_data->qf_apply_outflow);
447*2fe7aee7SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "q", num_comp_q,
448*2fe7aee7SLeila Ghaffari                           CEED_EVAL_INTERP);
449*2fe7aee7SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "surface qdata",
450*2fe7aee7SLeila Ghaffari                           q_data_size_sur, CEED_EVAL_NONE);
451*2fe7aee7SLeila Ghaffari     CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "x", num_comp_x,
452*2fe7aee7SLeila Ghaffari                           CEED_EVAL_INTERP);
453*2fe7aee7SLeila Ghaffari     CeedQFunctionAddOutput(ceed_data->qf_apply_outflow, "v", num_comp_q,
45477841947SLeila Ghaffari                            CEED_EVAL_INTERP);
45577841947SLeila Ghaffari   }
45677841947SLeila Ghaffari 
45777841947SLeila Ghaffari   // *****************************************************************************
45877841947SLeila Ghaffari   // CEED Operator Apply
45977841947SLeila Ghaffari   // *****************************************************************************
46077841947SLeila Ghaffari   // -- Apply CEED Operator for the geometric data
46177841947SLeila Ghaffari   CeedOperatorApply(ceed_data->op_setup_vol, ceed_data->x_coord,
46277841947SLeila Ghaffari                     ceed_data->q_data, CEED_REQUEST_IMMEDIATE);
46377841947SLeila Ghaffari 
46477841947SLeila Ghaffari   // -- Create and apply CEED Composite Operator for the entire domain
46577841947SLeila Ghaffari   if (!user->phys->implicit) { // RHS
46677841947SLeila Ghaffari     ierr = CreateOperatorForDomain(ceed, dm, bc, ceed_data, user->phys,
46777841947SLeila Ghaffari                                    user->op_rhs_vol, height, P_sur, Q_sur,
46877841947SLeila Ghaffari                                    q_data_size_sur, &user->op_rhs); CHKERRQ(ierr);
46977841947SLeila Ghaffari   } else { // IFunction
47077841947SLeila Ghaffari     ierr = CreateOperatorForDomain(ceed, dm, bc, ceed_data, user->phys,
47177841947SLeila Ghaffari                                    user->op_ifunction_vol, height, P_sur, Q_sur,
47277841947SLeila Ghaffari                                    q_data_size_sur, &user->op_ifunction); CHKERRQ(ierr);
47377841947SLeila Ghaffari   }
47477841947SLeila Ghaffari 
47577841947SLeila Ghaffari   PetscFunctionReturn(0);
47677841947SLeila Ghaffari }
477