177841947SLeila Ghaffari // Copyright (c) 2017, Lawrence Livermore National Security, LLC. Produced at 277841947SLeila Ghaffari // the Lawrence Livermore National Laboratory. LLNL-CODE-734707. All Rights 377841947SLeila Ghaffari // reserved. See files LICENSE and NOTICE for details. 477841947SLeila Ghaffari // 577841947SLeila Ghaffari // This file is part of CEED, a collection of benchmarks, miniapps, software 677841947SLeila Ghaffari // libraries and APIs for efficient high-order finite element and spectral 777841947SLeila Ghaffari // element discretizations for exascale applications. For more information and 877841947SLeila Ghaffari // source code availability see http://github.com/ceed. 977841947SLeila Ghaffari // 1077841947SLeila Ghaffari // The CEED research is supported by the Exascale Computing Project 17-SC-20-SC, 1177841947SLeila Ghaffari // a collaborative effort of two U.S. Department of Energy organizations (Office 1277841947SLeila Ghaffari // of Science and the National Nuclear Security Administration) responsible for 1377841947SLeila Ghaffari // the planning and preparation of a capable exascale ecosystem, including 1477841947SLeila Ghaffari // software, applications, hardware, advanced system engineering and early 1577841947SLeila Ghaffari // testbed platforms, in support of the nation's exascale computing imperative. 1677841947SLeila Ghaffari 1777841947SLeila Ghaffari /// @file 1877841947SLeila Ghaffari /// Setup libCEED for Navier-Stokes example using PETSc 1977841947SLeila Ghaffari 2077841947SLeila Ghaffari #include "../navierstokes.h" 2177841947SLeila Ghaffari 2277841947SLeila Ghaffari // Utility function - essential BC dofs are encoded in closure indices as -(i+1). 2377841947SLeila Ghaffari PetscInt Involute(PetscInt i) { 2477841947SLeila Ghaffari return i >= 0 ? i : -(i+1); 2577841947SLeila Ghaffari } 2677841947SLeila Ghaffari 2777841947SLeila Ghaffari // Utility function to create local CEED restriction 287ed3e4cdSJeremy L Thompson PetscErrorCode CreateRestrictionFromPlex(Ceed ceed, DM dm, CeedInt height, 297ed3e4cdSJeremy L Thompson DMLabel domain_label, CeedInt value, CeedElemRestriction *elem_restr) { 307ed3e4cdSJeremy L Thompson PetscInt num_elem, elem_size, num_dof, num_comp, *elem_restr_offsets; 3177841947SLeila Ghaffari PetscErrorCode ierr; 327ed3e4cdSJeremy L Thompson 3377841947SLeila Ghaffari PetscFunctionBeginUser; 347ed3e4cdSJeremy L Thompson ierr = DMPlexGetLocalOffsets(dm, domain_label, value, height, 0, &num_elem, 357ed3e4cdSJeremy L Thompson &elem_size, &num_comp, &num_dof, &elem_restr_offsets); 367ed3e4cdSJeremy L Thompson CHKERRQ(ierr); 3777841947SLeila Ghaffari 387ed3e4cdSJeremy L Thompson CeedElemRestrictionCreate(ceed, num_elem, elem_size, num_comp, 397ed3e4cdSJeremy L Thompson 1, num_dof, CEED_MEM_HOST, CEED_COPY_VALUES, 407ed3e4cdSJeremy L Thompson elem_restr_offsets, elem_restr); 417ed3e4cdSJeremy L Thompson ierr = PetscFree(elem_restr_offsets); CHKERRQ(ierr); 4277841947SLeila Ghaffari 4377841947SLeila Ghaffari PetscFunctionReturn(0); 4477841947SLeila Ghaffari } 4577841947SLeila Ghaffari 4677841947SLeila Ghaffari // Utility function to get Ceed Restriction for each domain 4777841947SLeila Ghaffari PetscErrorCode GetRestrictionForDomain(Ceed ceed, DM dm, CeedInt height, 4877841947SLeila Ghaffari DMLabel domain_label, PetscInt value, 497ed3e4cdSJeremy L Thompson CeedInt Q, CeedInt q_data_size, 5077841947SLeila Ghaffari CeedElemRestriction *elem_restr_q, 5177841947SLeila Ghaffari CeedElemRestriction *elem_restr_x, 5277841947SLeila Ghaffari CeedElemRestriction *elem_restr_qd_i) { 5377841947SLeila Ghaffari DM dm_coord; 5477841947SLeila Ghaffari CeedInt dim, loc_num_elem; 5577841947SLeila Ghaffari CeedInt Q_dim; 5677841947SLeila Ghaffari PetscErrorCode ierr; 5777841947SLeila Ghaffari PetscFunctionBeginUser; 5877841947SLeila Ghaffari 5977841947SLeila Ghaffari ierr = DMGetDimension(dm, &dim); CHKERRQ(ierr); 6077841947SLeila Ghaffari dim -= height; 6177841947SLeila Ghaffari Q_dim = CeedIntPow(Q, dim); 6277841947SLeila Ghaffari ierr = DMGetCoordinateDM(dm, &dm_coord); CHKERRQ(ierr); 6377841947SLeila Ghaffari ierr = DMPlexSetClosurePermutationTensor(dm_coord, PETSC_DETERMINE, NULL); 6477841947SLeila Ghaffari CHKERRQ(ierr); 657ed3e4cdSJeremy L Thompson ierr = CreateRestrictionFromPlex(ceed, dm, height, domain_label, value, 667ed3e4cdSJeremy L Thompson elem_restr_q); 677ed3e4cdSJeremy L Thompson CHKERRQ(ierr); 687ed3e4cdSJeremy L Thompson ierr = CreateRestrictionFromPlex(ceed, dm_coord, height, domain_label, value, 697ed3e4cdSJeremy L Thompson elem_restr_x); 707ed3e4cdSJeremy L Thompson CHKERRQ(ierr); 7177841947SLeila Ghaffari CeedElemRestrictionGetNumElements(*elem_restr_q, &loc_num_elem); 7277841947SLeila Ghaffari CeedElemRestrictionCreateStrided(ceed, loc_num_elem, Q_dim, 7377841947SLeila Ghaffari q_data_size, q_data_size*loc_num_elem*Q_dim, 7477841947SLeila Ghaffari CEED_STRIDES_BACKEND, elem_restr_qd_i); 7577841947SLeila Ghaffari PetscFunctionReturn(0); 7677841947SLeila Ghaffari } 7777841947SLeila Ghaffari 7877841947SLeila Ghaffari // Utility function to create CEED Composite Operator for the entire domain 7977841947SLeila Ghaffari PetscErrorCode CreateOperatorForDomain(Ceed ceed, DM dm, SimpleBC bc, 8077841947SLeila Ghaffari CeedData ceed_data, Physics phys, 8177841947SLeila Ghaffari CeedOperator op_apply_vol, CeedInt height, 8277841947SLeila Ghaffari CeedInt P_sur, CeedInt Q_sur, CeedInt q_data_size_sur, 8377841947SLeila Ghaffari CeedOperator *op_apply) { 84*2fe7aee7SLeila Ghaffari //CeedInt dim; 8577841947SLeila Ghaffari DMLabel domain_label; 8677841947SLeila Ghaffari PetscErrorCode ierr; 8777841947SLeila Ghaffari PetscFunctionBeginUser; 8877841947SLeila Ghaffari 8977841947SLeila Ghaffari // Create Composite Operaters 9077841947SLeila Ghaffari CeedCompositeOperatorCreate(ceed, op_apply); 9177841947SLeila Ghaffari 9277841947SLeila Ghaffari // --Apply Sub-Operator for the volume 9377841947SLeila Ghaffari CeedCompositeOperatorAddSub(*op_apply, op_apply_vol); 9477841947SLeila Ghaffari 9577841947SLeila Ghaffari // -- Create Sub-Operator for in/outflow BCs 96e6225c47SLeila Ghaffari if (phys->has_neumann) { 9777841947SLeila Ghaffari // --- Setup 9877841947SLeila Ghaffari ierr = DMGetLabel(dm, "Face Sets", &domain_label); CHKERRQ(ierr); 99*2fe7aee7SLeila Ghaffari //ierr = DMGetDimension(dm, &dim); CHKERRQ(ierr); 10077841947SLeila Ghaffari 10177841947SLeila Ghaffari // --- Get number of quadrature points for the boundaries 10277841947SLeila Ghaffari CeedInt num_qpts_sur; 10377841947SLeila Ghaffari CeedBasisGetNumQuadraturePoints(ceed_data->basis_q_sur, &num_qpts_sur); 10477841947SLeila Ghaffari 105*2fe7aee7SLeila Ghaffari // --- Create Sub-Operator for inflow boundaries 106*2fe7aee7SLeila Ghaffari for (CeedInt i=0; i < bc->num_inflow; i++) { 10777841947SLeila Ghaffari CeedVector q_data_sur; 108*2fe7aee7SLeila Ghaffari CeedOperator op_setup_sur, op_apply_inflow; 109*2fe7aee7SLeila Ghaffari CeedElemRestriction elem_restr_x_sur, elem_restr_q_sur, elem_restr_qd_i_sur; 11077841947SLeila Ghaffari 11177841947SLeila Ghaffari // ---- CEED Restriction 112*2fe7aee7SLeila Ghaffari ierr = GetRestrictionForDomain(ceed, dm, height, domain_label, bc->inflows[i], 113*2fe7aee7SLeila Ghaffari Q_sur, q_data_size_sur, &elem_restr_q_sur, &elem_restr_x_sur, 114*2fe7aee7SLeila Ghaffari &elem_restr_qd_i_sur); 11577841947SLeila Ghaffari CHKERRQ(ierr); 11677841947SLeila Ghaffari 11777841947SLeila Ghaffari // ---- CEED Vector 11877841947SLeila Ghaffari PetscInt loc_num_elem_sur; 11977841947SLeila Ghaffari CeedElemRestrictionGetNumElements(elem_restr_q_sur, &loc_num_elem_sur); 12077841947SLeila Ghaffari CeedVectorCreate(ceed, q_data_size_sur*loc_num_elem_sur*num_qpts_sur, 12177841947SLeila Ghaffari &q_data_sur); 12277841947SLeila Ghaffari 12377841947SLeila Ghaffari // ---- CEED Operator 12477841947SLeila Ghaffari // ----- CEED Operator for Setup (geometric factors) 12577841947SLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_setup_sur, NULL, NULL, &op_setup_sur); 12677841947SLeila Ghaffari CeedOperatorSetField(op_setup_sur, "dx", elem_restr_x_sur, 127e6225c47SLeila Ghaffari ceed_data->basis_x_sur, CEED_VECTOR_ACTIVE); 12877841947SLeila Ghaffari CeedOperatorSetField(op_setup_sur, "weight", CEED_ELEMRESTRICTION_NONE, 12977841947SLeila Ghaffari ceed_data->basis_x_sur, CEED_VECTOR_NONE); 130a61c78d6SJeremy L Thompson CeedOperatorSetField(op_setup_sur, "surface qdata", elem_restr_qd_i_sur, 13177841947SLeila Ghaffari CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE); 13277841947SLeila Ghaffari 13377841947SLeila Ghaffari // ----- CEED Operator for Physics 134*2fe7aee7SLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_apply_inflow, NULL, NULL, 135*2fe7aee7SLeila Ghaffari &op_apply_inflow); 136*2fe7aee7SLeila Ghaffari CeedOperatorSetField(op_apply_inflow, "q", elem_restr_q_sur, 13777841947SLeila Ghaffari ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 138*2fe7aee7SLeila Ghaffari CeedOperatorSetField(op_apply_inflow, "surface qdata", elem_restr_qd_i_sur, 13977841947SLeila Ghaffari CEED_BASIS_COLLOCATED, q_data_sur); 140*2fe7aee7SLeila Ghaffari CeedOperatorSetField(op_apply_inflow, "x", elem_restr_x_sur, 14177841947SLeila Ghaffari ceed_data->basis_x_sur, ceed_data->x_coord); 142*2fe7aee7SLeila Ghaffari CeedOperatorSetField(op_apply_inflow, "v", elem_restr_q_sur, 14377841947SLeila Ghaffari ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 14477841947SLeila Ghaffari 14577841947SLeila Ghaffari // ----- Apply CEED operator for Setup 14677841947SLeila Ghaffari CeedOperatorApply(op_setup_sur, ceed_data->x_coord, q_data_sur, 14777841947SLeila Ghaffari CEED_REQUEST_IMMEDIATE); 14877841947SLeila Ghaffari 149*2fe7aee7SLeila Ghaffari // ----- Apply Sub-Operator for Physics 150*2fe7aee7SLeila Ghaffari CeedCompositeOperatorAddSub(*op_apply, op_apply_inflow); 15177841947SLeila Ghaffari 15277841947SLeila Ghaffari // ----- Cleanup 15377841947SLeila Ghaffari CeedVectorDestroy(&q_data_sur); 15477841947SLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_q_sur); 15577841947SLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_x_sur); 15677841947SLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_qd_i_sur); 15777841947SLeila Ghaffari CeedOperatorDestroy(&op_setup_sur); 158*2fe7aee7SLeila Ghaffari CeedOperatorDestroy(&op_apply_inflow); 15977841947SLeila Ghaffari } 16077841947SLeila Ghaffari 161*2fe7aee7SLeila Ghaffari // --- Create Sub-Operator for outflow boundaries 162*2fe7aee7SLeila Ghaffari for (CeedInt i=0; i < bc->num_outflow; i++) { 163*2fe7aee7SLeila Ghaffari CeedVector q_data_sur; 164*2fe7aee7SLeila Ghaffari CeedOperator op_setup_sur, op_apply_outflow; 165*2fe7aee7SLeila Ghaffari CeedElemRestriction elem_restr_x_sur, elem_restr_q_sur, elem_restr_qd_i_sur; 166*2fe7aee7SLeila Ghaffari 167*2fe7aee7SLeila Ghaffari // ---- CEED Restriction 168*2fe7aee7SLeila Ghaffari ierr = GetRestrictionForDomain(ceed, dm, height, domain_label, bc->outflows[i], 169*2fe7aee7SLeila Ghaffari Q_sur, q_data_size_sur, &elem_restr_q_sur, &elem_restr_x_sur, 170*2fe7aee7SLeila Ghaffari &elem_restr_qd_i_sur); 171*2fe7aee7SLeila Ghaffari CHKERRQ(ierr); 172*2fe7aee7SLeila Ghaffari 173*2fe7aee7SLeila Ghaffari // ---- CEED Vector 174*2fe7aee7SLeila Ghaffari PetscInt loc_num_elem_sur; 175*2fe7aee7SLeila Ghaffari CeedElemRestrictionGetNumElements(elem_restr_q_sur, &loc_num_elem_sur); 176*2fe7aee7SLeila Ghaffari CeedVectorCreate(ceed, q_data_size_sur*loc_num_elem_sur*num_qpts_sur, 177*2fe7aee7SLeila Ghaffari &q_data_sur); 178*2fe7aee7SLeila Ghaffari 179*2fe7aee7SLeila Ghaffari // ---- CEED Operator 180*2fe7aee7SLeila Ghaffari // ----- CEED Operator for Setup (geometric factors) 181*2fe7aee7SLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_setup_sur, NULL, NULL, &op_setup_sur); 182*2fe7aee7SLeila Ghaffari CeedOperatorSetField(op_setup_sur, "dx", elem_restr_x_sur, 183*2fe7aee7SLeila Ghaffari ceed_data->basis_x_sur, CEED_VECTOR_ACTIVE); 184*2fe7aee7SLeila Ghaffari CeedOperatorSetField(op_setup_sur, "weight", CEED_ELEMRESTRICTION_NONE, 185*2fe7aee7SLeila Ghaffari ceed_data->basis_x_sur, CEED_VECTOR_NONE); 186*2fe7aee7SLeila Ghaffari CeedOperatorSetField(op_setup_sur, "surface qdata", elem_restr_qd_i_sur, 187*2fe7aee7SLeila Ghaffari CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE); 188*2fe7aee7SLeila Ghaffari 189*2fe7aee7SLeila Ghaffari // ----- CEED Operator for Physics 190*2fe7aee7SLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_apply_outflow, NULL, NULL, 191*2fe7aee7SLeila Ghaffari &op_apply_outflow); 192*2fe7aee7SLeila Ghaffari CeedOperatorSetField(op_apply_outflow, "q", elem_restr_q_sur, 193*2fe7aee7SLeila Ghaffari ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 194*2fe7aee7SLeila Ghaffari CeedOperatorSetField(op_apply_outflow, "surface qdata", elem_restr_qd_i_sur, 195*2fe7aee7SLeila Ghaffari CEED_BASIS_COLLOCATED, q_data_sur); 196*2fe7aee7SLeila Ghaffari CeedOperatorSetField(op_apply_outflow, "x", elem_restr_x_sur, 197*2fe7aee7SLeila Ghaffari ceed_data->basis_x_sur, ceed_data->x_coord); 198*2fe7aee7SLeila Ghaffari CeedOperatorSetField(op_apply_outflow, "v", elem_restr_q_sur, 199*2fe7aee7SLeila Ghaffari ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE); 200*2fe7aee7SLeila Ghaffari 201*2fe7aee7SLeila Ghaffari // ----- Apply CEED operator for Setup 202*2fe7aee7SLeila Ghaffari CeedOperatorApply(op_setup_sur, ceed_data->x_coord, q_data_sur, 203*2fe7aee7SLeila Ghaffari CEED_REQUEST_IMMEDIATE); 204*2fe7aee7SLeila Ghaffari 205*2fe7aee7SLeila Ghaffari // ----- Apply Sub-Operator for Physics 206*2fe7aee7SLeila Ghaffari CeedCompositeOperatorAddSub(*op_apply, op_apply_outflow); 207*2fe7aee7SLeila Ghaffari 208*2fe7aee7SLeila Ghaffari // ----- Cleanup 209*2fe7aee7SLeila Ghaffari CeedVectorDestroy(&q_data_sur); 210*2fe7aee7SLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_q_sur); 211*2fe7aee7SLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_x_sur); 212*2fe7aee7SLeila Ghaffari CeedElemRestrictionDestroy(&elem_restr_qd_i_sur); 213*2fe7aee7SLeila Ghaffari CeedOperatorDestroy(&op_setup_sur); 214*2fe7aee7SLeila Ghaffari CeedOperatorDestroy(&op_apply_outflow); 215*2fe7aee7SLeila Ghaffari } 216*2fe7aee7SLeila Ghaffari } 21777841947SLeila Ghaffari PetscFunctionReturn(0); 21877841947SLeila Ghaffari } 21977841947SLeila Ghaffari 22077841947SLeila Ghaffari PetscErrorCode SetupLibceed(Ceed ceed, CeedData ceed_data, DM dm, User user, 22177841947SLeila Ghaffari AppCtx app_ctx, ProblemData *problem, SimpleBC bc) { 22277841947SLeila Ghaffari PetscErrorCode ierr; 22377841947SLeila Ghaffari PetscFunctionBeginUser; 22477841947SLeila Ghaffari 22577841947SLeila Ghaffari // ***************************************************************************** 22677841947SLeila Ghaffari // Set up CEED objects for the interior domain (volume) 22777841947SLeila Ghaffari // ***************************************************************************** 22877841947SLeila Ghaffari const PetscInt num_comp_q = 5; 22977841947SLeila Ghaffari const CeedInt dim = problem->dim, 23077841947SLeila Ghaffari num_comp_x = problem->dim, 23177841947SLeila Ghaffari q_data_size_vol = problem->q_data_size_vol, 23277841947SLeila Ghaffari P = app_ctx->degree + 1, 23377841947SLeila Ghaffari Q = P + app_ctx->q_extra; 23477841947SLeila Ghaffari 23577841947SLeila Ghaffari // ----------------------------------------------------------------------------- 23677841947SLeila Ghaffari // CEED Bases 23777841947SLeila Ghaffari // ----------------------------------------------------------------------------- 23877841947SLeila Ghaffari CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_q, P, Q, CEED_GAUSS, 23977841947SLeila Ghaffari &ceed_data->basis_q); 24077841947SLeila Ghaffari CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_x, 2, Q, CEED_GAUSS, 24177841947SLeila Ghaffari &ceed_data->basis_x); 24277841947SLeila Ghaffari CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_x, 2, P, 24377841947SLeila Ghaffari CEED_GAUSS_LOBATTO, &ceed_data->basis_xc); 24477841947SLeila Ghaffari 24577841947SLeila Ghaffari // ----------------------------------------------------------------------------- 24677841947SLeila Ghaffari // CEED Restrictions 24777841947SLeila Ghaffari // ----------------------------------------------------------------------------- 24877841947SLeila Ghaffari // -- Create restriction 2497ed3e4cdSJeremy L Thompson ierr = GetRestrictionForDomain(ceed, dm, 0, 0, 0, Q, q_data_size_vol, 2507ed3e4cdSJeremy L Thompson &ceed_data->elem_restr_q, &ceed_data->elem_restr_x, 25177841947SLeila Ghaffari &ceed_data->elem_restr_qd_i); CHKERRQ(ierr); 25277841947SLeila Ghaffari // -- Create E vectors 25377841947SLeila Ghaffari CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->q_ceed, NULL); 25477841947SLeila Ghaffari CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->q_dot_ceed, 25577841947SLeila Ghaffari NULL); 25677841947SLeila Ghaffari CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->g_ceed, NULL); 25777841947SLeila Ghaffari 25877841947SLeila Ghaffari // ----------------------------------------------------------------------------- 25977841947SLeila Ghaffari // CEED QFunctions 26077841947SLeila Ghaffari // ----------------------------------------------------------------------------- 26177841947SLeila Ghaffari // -- Create QFunction for quadrature data 26277841947SLeila Ghaffari CeedQFunctionCreateInterior(ceed, 1, problem->setup_vol, problem->setup_vol_loc, 26377841947SLeila Ghaffari &ceed_data->qf_setup_vol); 26477841947SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_setup_vol, "dx", num_comp_x*dim, 26577841947SLeila Ghaffari CEED_EVAL_GRAD); 26677841947SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_setup_vol, "weight", 1, CEED_EVAL_WEIGHT); 267a61c78d6SJeremy L Thompson CeedQFunctionAddOutput(ceed_data->qf_setup_vol, "qdata", q_data_size_vol, 26877841947SLeila Ghaffari CEED_EVAL_NONE); 26977841947SLeila Ghaffari 27077841947SLeila Ghaffari // -- Create QFunction for ICs 27177841947SLeila Ghaffari CeedQFunctionCreateInterior(ceed, 1, problem->ics, problem->ics_loc, 27277841947SLeila Ghaffari &ceed_data->qf_ics); 27377841947SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_ics, "x", num_comp_x, CEED_EVAL_INTERP); 27477841947SLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_ics, "q0", num_comp_q, CEED_EVAL_NONE); 27577841947SLeila Ghaffari 27677841947SLeila Ghaffari // -- Create QFunction for RHS 27777841947SLeila Ghaffari if (problem->apply_vol_rhs) { 27877841947SLeila Ghaffari CeedQFunctionCreateInterior(ceed, 1, problem->apply_vol_rhs, 27977841947SLeila Ghaffari problem->apply_vol_rhs_loc, &ceed_data->qf_rhs_vol); 28077841947SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "q", num_comp_q, CEED_EVAL_INTERP); 28177841947SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "dq", num_comp_q*dim, 28277841947SLeila Ghaffari CEED_EVAL_GRAD); 283a61c78d6SJeremy L Thompson CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "qdata", q_data_size_vol, 28477841947SLeila Ghaffari CEED_EVAL_NONE); 28577841947SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "x", num_comp_x, CEED_EVAL_INTERP); 28677841947SLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_rhs_vol, "v", num_comp_q, 28777841947SLeila Ghaffari CEED_EVAL_INTERP); 28877841947SLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_rhs_vol, "dv", num_comp_q*dim, 28977841947SLeila Ghaffari CEED_EVAL_GRAD); 29077841947SLeila Ghaffari } 29177841947SLeila Ghaffari 29277841947SLeila Ghaffari // -- Create QFunction for IFunction 29377841947SLeila Ghaffari if (problem->apply_vol_ifunction) { 29477841947SLeila Ghaffari CeedQFunctionCreateInterior(ceed, 1, problem->apply_vol_ifunction, 29577841947SLeila Ghaffari problem->apply_vol_ifunction_loc, &ceed_data->qf_ifunction_vol); 29677841947SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "q", num_comp_q, 29777841947SLeila Ghaffari CEED_EVAL_INTERP); 29877841947SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "dq", num_comp_q*dim, 29977841947SLeila Ghaffari CEED_EVAL_GRAD); 300a61c78d6SJeremy L Thompson CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "q dot", num_comp_q, 30177841947SLeila Ghaffari CEED_EVAL_INTERP); 302a61c78d6SJeremy L Thompson CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "qdata", q_data_size_vol, 30377841947SLeila Ghaffari CEED_EVAL_NONE); 30477841947SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "x", num_comp_x, 30577841947SLeila Ghaffari CEED_EVAL_INTERP); 30677841947SLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_ifunction_vol, "v", num_comp_q, 30777841947SLeila Ghaffari CEED_EVAL_INTERP); 30877841947SLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_ifunction_vol, "dv", num_comp_q*dim, 30977841947SLeila Ghaffari CEED_EVAL_GRAD); 31077841947SLeila Ghaffari } 31177841947SLeila Ghaffari 31277841947SLeila Ghaffari // --------------------------------------------------------------------------- 31377841947SLeila Ghaffari // Element coordinates 31477841947SLeila Ghaffari // --------------------------------------------------------------------------- 31577841947SLeila Ghaffari // -- Create CEED vector 31677841947SLeila Ghaffari CeedElemRestrictionCreateVector(ceed_data->elem_restr_x, &ceed_data->x_coord, 31777841947SLeila Ghaffari NULL); 31877841947SLeila Ghaffari 31977841947SLeila Ghaffari // -- Copy PETSc vector in CEED vector 32077841947SLeila Ghaffari Vec X_loc; 32177841947SLeila Ghaffari const PetscScalar *X_loc_array; 32277841947SLeila Ghaffari ierr = DMGetCoordinatesLocal(dm, &X_loc); CHKERRQ(ierr); 3231864f1c2SLeila Ghaffari ierr = VecScale(X_loc, problem->dm_scale); CHKERRQ(ierr); 32477841947SLeila Ghaffari ierr = VecGetArrayRead(X_loc, &X_loc_array); CHKERRQ(ierr); 32577841947SLeila Ghaffari CeedVectorSetArray(ceed_data->x_coord, CEED_MEM_HOST, CEED_COPY_VALUES, 32677841947SLeila Ghaffari (PetscScalar *)X_loc_array); 32777841947SLeila Ghaffari ierr = VecRestoreArrayRead(X_loc, &X_loc_array); CHKERRQ(ierr); 32877841947SLeila Ghaffari 32977841947SLeila Ghaffari // ----------------------------------------------------------------------------- 33077841947SLeila Ghaffari // CEED vectors 33177841947SLeila Ghaffari // ----------------------------------------------------------------------------- 33277841947SLeila Ghaffari // -- Create CEED vector for geometric data 33377841947SLeila Ghaffari CeedInt num_qpts_vol; 33477841947SLeila Ghaffari PetscInt loc_num_elem_vol; 33577841947SLeila Ghaffari CeedBasisGetNumQuadraturePoints(ceed_data->basis_q, &num_qpts_vol); 33677841947SLeila Ghaffari CeedElemRestrictionGetNumElements(ceed_data->elem_restr_q, &loc_num_elem_vol); 33777841947SLeila Ghaffari CeedVectorCreate(ceed, q_data_size_vol*loc_num_elem_vol*num_qpts_vol, 33877841947SLeila Ghaffari &ceed_data->q_data); 33977841947SLeila Ghaffari 34077841947SLeila Ghaffari // ----------------------------------------------------------------------------- 34177841947SLeila Ghaffari // CEED Operators 34277841947SLeila Ghaffari // ----------------------------------------------------------------------------- 34377841947SLeila Ghaffari // -- Create CEED operator for quadrature data 34477841947SLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_setup_vol, NULL, NULL, 34577841947SLeila Ghaffari &ceed_data->op_setup_vol); 34677841947SLeila Ghaffari CeedOperatorSetField(ceed_data->op_setup_vol, "dx", ceed_data->elem_restr_x, 34777841947SLeila Ghaffari ceed_data->basis_x, CEED_VECTOR_ACTIVE); 34877841947SLeila Ghaffari CeedOperatorSetField(ceed_data->op_setup_vol, "weight", 349e6225c47SLeila Ghaffari CEED_ELEMRESTRICTION_NONE, ceed_data->basis_x, CEED_VECTOR_NONE); 350a61c78d6SJeremy L Thompson CeedOperatorSetField(ceed_data->op_setup_vol, "qdata", 351e6225c47SLeila Ghaffari ceed_data->elem_restr_qd_i, CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE); 35277841947SLeila Ghaffari 35377841947SLeila Ghaffari // -- Create CEED operator for ICs 35477841947SLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_ics, NULL, NULL, &ceed_data->op_ics); 35577841947SLeila Ghaffari CeedOperatorSetField(ceed_data->op_ics, "x", ceed_data->elem_restr_x, 35677841947SLeila Ghaffari ceed_data->basis_xc, CEED_VECTOR_ACTIVE); 35777841947SLeila Ghaffari CeedOperatorSetField(ceed_data->op_ics, "q0", ceed_data->elem_restr_q, 35877841947SLeila Ghaffari CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE); 35977841947SLeila Ghaffari 36077841947SLeila Ghaffari // Create CEED operator for RHS 36177841947SLeila Ghaffari if (ceed_data->qf_rhs_vol) { 36277841947SLeila Ghaffari CeedOperator op; 36377841947SLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_rhs_vol, NULL, NULL, &op); 36477841947SLeila Ghaffari CeedOperatorSetField(op, "q", ceed_data->elem_restr_q, ceed_data->basis_q, 36577841947SLeila Ghaffari CEED_VECTOR_ACTIVE); 36677841947SLeila Ghaffari CeedOperatorSetField(op, "dq", ceed_data->elem_restr_q, ceed_data->basis_q, 36777841947SLeila Ghaffari CEED_VECTOR_ACTIVE); 368a61c78d6SJeremy L Thompson CeedOperatorSetField(op, "qdata", ceed_data->elem_restr_qd_i, 369e6225c47SLeila Ghaffari CEED_BASIS_COLLOCATED, ceed_data->q_data); 37077841947SLeila Ghaffari CeedOperatorSetField(op, "x", ceed_data->elem_restr_x, ceed_data->basis_x, 37177841947SLeila Ghaffari ceed_data->x_coord); 37277841947SLeila Ghaffari CeedOperatorSetField(op, "v", ceed_data->elem_restr_q, ceed_data->basis_q, 37377841947SLeila Ghaffari CEED_VECTOR_ACTIVE); 37477841947SLeila Ghaffari CeedOperatorSetField(op, "dv", ceed_data->elem_restr_q, ceed_data->basis_q, 37577841947SLeila Ghaffari CEED_VECTOR_ACTIVE); 37677841947SLeila Ghaffari user->op_rhs_vol = op; 37777841947SLeila Ghaffari } 37877841947SLeila Ghaffari 37977841947SLeila Ghaffari // -- CEED operator for IFunction 38077841947SLeila Ghaffari if (ceed_data->qf_ifunction_vol) { 38177841947SLeila Ghaffari CeedOperator op; 38277841947SLeila Ghaffari CeedOperatorCreate(ceed, ceed_data->qf_ifunction_vol, NULL, NULL, &op); 38377841947SLeila Ghaffari CeedOperatorSetField(op, "q", ceed_data->elem_restr_q, ceed_data->basis_q, 38477841947SLeila Ghaffari CEED_VECTOR_ACTIVE); 38577841947SLeila Ghaffari CeedOperatorSetField(op, "dq", ceed_data->elem_restr_q, ceed_data->basis_q, 38677841947SLeila Ghaffari CEED_VECTOR_ACTIVE); 387a61c78d6SJeremy L Thompson CeedOperatorSetField(op, "q dot", ceed_data->elem_restr_q, ceed_data->basis_q, 38877841947SLeila Ghaffari user->q_dot_ceed); 389a61c78d6SJeremy L Thompson CeedOperatorSetField(op, "qdata", ceed_data->elem_restr_qd_i, 390e6225c47SLeila Ghaffari CEED_BASIS_COLLOCATED, ceed_data->q_data); 39177841947SLeila Ghaffari CeedOperatorSetField(op, "x", ceed_data->elem_restr_x, ceed_data->basis_x, 39277841947SLeila Ghaffari ceed_data->x_coord); 39377841947SLeila Ghaffari CeedOperatorSetField(op, "v", ceed_data->elem_restr_q, ceed_data->basis_q, 39477841947SLeila Ghaffari CEED_VECTOR_ACTIVE); 39577841947SLeila Ghaffari CeedOperatorSetField(op, "dv", ceed_data->elem_restr_q, ceed_data->basis_q, 39677841947SLeila Ghaffari CEED_VECTOR_ACTIVE); 39777841947SLeila Ghaffari user->op_ifunction_vol = op; 39877841947SLeila Ghaffari } 39977841947SLeila Ghaffari 40077841947SLeila Ghaffari // ***************************************************************************** 40177841947SLeila Ghaffari // Set up CEED objects for the exterior domain (surface) 40277841947SLeila Ghaffari // ***************************************************************************** 40377841947SLeila Ghaffari CeedInt height = 1, 40477841947SLeila Ghaffari dim_sur = dim - height, 40577841947SLeila Ghaffari P_sur = app_ctx->degree + 1, 40677841947SLeila Ghaffari Q_sur = P_sur + app_ctx->q_extra; 40777841947SLeila Ghaffari const CeedInt q_data_size_sur = problem->q_data_size_sur; 40877841947SLeila Ghaffari 40977841947SLeila Ghaffari // ----------------------------------------------------------------------------- 41077841947SLeila Ghaffari // CEED Bases 41177841947SLeila Ghaffari // ----------------------------------------------------------------------------- 41277841947SLeila Ghaffari CeedBasisCreateTensorH1Lagrange(ceed, dim_sur, num_comp_q, P_sur, Q_sur, 41377841947SLeila Ghaffari CEED_GAUSS, &ceed_data->basis_q_sur); 41477841947SLeila Ghaffari CeedBasisCreateTensorH1Lagrange(ceed, dim_sur, num_comp_x, 2, Q_sur, CEED_GAUSS, 41577841947SLeila Ghaffari &ceed_data->basis_x_sur); 41677841947SLeila Ghaffari 41777841947SLeila Ghaffari // ----------------------------------------------------------------------------- 41877841947SLeila Ghaffari // CEED QFunctions 41977841947SLeila Ghaffari // ----------------------------------------------------------------------------- 42077841947SLeila Ghaffari // -- Create QFunction for quadrature data 42177841947SLeila Ghaffari CeedQFunctionCreateInterior(ceed, 1, problem->setup_sur, problem->setup_sur_loc, 42277841947SLeila Ghaffari &ceed_data->qf_setup_sur); 42377841947SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_setup_sur, "dx", num_comp_x*dim_sur, 42477841947SLeila Ghaffari CEED_EVAL_GRAD); 42577841947SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_setup_sur, "weight", 1, CEED_EVAL_WEIGHT); 426a61c78d6SJeremy L Thompson CeedQFunctionAddOutput(ceed_data->qf_setup_sur, "surface qdata", 427*2fe7aee7SLeila Ghaffari q_data_size_sur, CEED_EVAL_NONE); 42877841947SLeila Ghaffari 429*2fe7aee7SLeila Ghaffari // -- Creat QFunction for inflow boundaries 430*2fe7aee7SLeila Ghaffari if (problem->apply_inflow) { 431*2fe7aee7SLeila Ghaffari CeedQFunctionCreateInterior(ceed, 1, problem->apply_inflow, 432*2fe7aee7SLeila Ghaffari problem->apply_inflow_loc, &ceed_data->qf_apply_inflow); 433*2fe7aee7SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "q", num_comp_q, 43477841947SLeila Ghaffari CEED_EVAL_INTERP); 435*2fe7aee7SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "surface qdata", 436*2fe7aee7SLeila Ghaffari q_data_size_sur, CEED_EVAL_NONE); 437*2fe7aee7SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_inflow, "x", num_comp_x, 43877841947SLeila Ghaffari CEED_EVAL_INTERP); 439*2fe7aee7SLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_apply_inflow, "v", num_comp_q, 440*2fe7aee7SLeila Ghaffari CEED_EVAL_INTERP); 441*2fe7aee7SLeila Ghaffari } 442*2fe7aee7SLeila Ghaffari 443*2fe7aee7SLeila Ghaffari // -- Creat QFunction for outflow boundaries 444*2fe7aee7SLeila Ghaffari if (problem->apply_outflow) { 445*2fe7aee7SLeila Ghaffari CeedQFunctionCreateInterior(ceed, 1, problem->apply_outflow, 446*2fe7aee7SLeila Ghaffari problem->apply_outflow_loc, &ceed_data->qf_apply_outflow); 447*2fe7aee7SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "q", num_comp_q, 448*2fe7aee7SLeila Ghaffari CEED_EVAL_INTERP); 449*2fe7aee7SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "surface qdata", 450*2fe7aee7SLeila Ghaffari q_data_size_sur, CEED_EVAL_NONE); 451*2fe7aee7SLeila Ghaffari CeedQFunctionAddInput(ceed_data->qf_apply_outflow, "x", num_comp_x, 452*2fe7aee7SLeila Ghaffari CEED_EVAL_INTERP); 453*2fe7aee7SLeila Ghaffari CeedQFunctionAddOutput(ceed_data->qf_apply_outflow, "v", num_comp_q, 45477841947SLeila Ghaffari CEED_EVAL_INTERP); 45577841947SLeila Ghaffari } 45677841947SLeila Ghaffari 45777841947SLeila Ghaffari // ***************************************************************************** 45877841947SLeila Ghaffari // CEED Operator Apply 45977841947SLeila Ghaffari // ***************************************************************************** 46077841947SLeila Ghaffari // -- Apply CEED Operator for the geometric data 46177841947SLeila Ghaffari CeedOperatorApply(ceed_data->op_setup_vol, ceed_data->x_coord, 46277841947SLeila Ghaffari ceed_data->q_data, CEED_REQUEST_IMMEDIATE); 46377841947SLeila Ghaffari 46477841947SLeila Ghaffari // -- Create and apply CEED Composite Operator for the entire domain 46577841947SLeila Ghaffari if (!user->phys->implicit) { // RHS 46677841947SLeila Ghaffari ierr = CreateOperatorForDomain(ceed, dm, bc, ceed_data, user->phys, 46777841947SLeila Ghaffari user->op_rhs_vol, height, P_sur, Q_sur, 46877841947SLeila Ghaffari q_data_size_sur, &user->op_rhs); CHKERRQ(ierr); 46977841947SLeila Ghaffari } else { // IFunction 47077841947SLeila Ghaffari ierr = CreateOperatorForDomain(ceed, dm, bc, ceed_data, user->phys, 47177841947SLeila Ghaffari user->op_ifunction_vol, height, P_sur, Q_sur, 47277841947SLeila Ghaffari q_data_size_sur, &user->op_ifunction); CHKERRQ(ierr); 47377841947SLeila Ghaffari } 47477841947SLeila Ghaffari 47577841947SLeila Ghaffari PetscFunctionReturn(0); 47677841947SLeila Ghaffari } 477