1 // Copyright (c) 2017-2022, Lawrence Livermore National Security, LLC and other CEED contributors. 2 // All Rights Reserved. See the top-level LICENSE and NOTICE files for details. 3 // 4 // SPDX-License-Identifier: BSD-2-Clause 5 // 6 // This file is part of CEED: http://github.com/ceed 7 8 /// @file 9 /// Setup libCEED for Navier-Stokes example using PETSc 10 11 #include <ceed.h> 12 #include <petscdmplex.h> 13 14 #include "../navierstokes.h" 15 16 PetscErrorCode AddBCSubOperator(Ceed ceed, DM dm, CeedData ceed_data, DMLabel domain_label, PetscInt label_value, CeedInt height, CeedInt Q_sur, 17 CeedInt q_data_size_sur, CeedInt jac_data_size_sur, CeedQFunction qf_apply_bc, CeedQFunction qf_apply_bc_jacobian, 18 CeedOperator *op_apply, CeedOperator *op_apply_ijacobian) { 19 CeedVector q_data_sur, jac_data_sur = NULL; 20 CeedOperator op_setup_sur, op_apply_bc, op_apply_bc_jacobian = NULL; 21 CeedElemRestriction elem_restr_x_sur, elem_restr_q_sur, elem_restr_qd_i_sur, elem_restr_jd_i_sur = NULL; 22 CeedInt num_qpts_sur, dm_field = 0; 23 24 PetscFunctionBeginUser; 25 // --- Get number of quadrature points for the boundaries 26 PetscCallCeed(ceed, CeedBasisGetNumQuadraturePoints(ceed_data->basis_q_sur, &num_qpts_sur)); 27 28 // ---- CEED Restriction 29 PetscCall(DMPlexCeedElemRestrictionCreate(ceed, dm, domain_label, label_value, height, dm_field, &elem_restr_q_sur)); 30 PetscCall(DMPlexCeedElemRestrictionCoordinateCreate(ceed, dm, domain_label, label_value, height, &elem_restr_x_sur)); 31 PetscCall(DMPlexCeedElemRestrictionQDataCreate(ceed, dm, domain_label, label_value, height, q_data_size_sur, &elem_restr_qd_i_sur)); 32 if (jac_data_size_sur > 0) { 33 // State-dependent data will be passed from residual to Jacobian. This will be collocated. 34 PetscCall(DMPlexCeedElemRestrictionQDataCreate(ceed, dm, domain_label, label_value, height, jac_data_size_sur, &elem_restr_jd_i_sur)); 35 PetscCallCeed(ceed, CeedElemRestrictionCreateVector(elem_restr_jd_i_sur, &jac_data_sur, NULL)); 36 } 37 38 // ---- CEED Vector 39 CeedInt loc_num_elem_sur; 40 PetscCallCeed(ceed, CeedElemRestrictionGetNumElements(elem_restr_q_sur, &loc_num_elem_sur)); 41 PetscCallCeed(ceed, CeedVectorCreate(ceed, q_data_size_sur * loc_num_elem_sur * num_qpts_sur, &q_data_sur)); 42 43 // ---- CEED Operator 44 // ----- CEED Operator for Setup (geometric factors) 45 PetscCallCeed(ceed, CeedOperatorCreate(ceed, ceed_data->qf_setup_sur, NULL, NULL, &op_setup_sur)); 46 PetscCallCeed(ceed, CeedOperatorSetField(op_setup_sur, "dx", elem_restr_x_sur, ceed_data->basis_x_sur, CEED_VECTOR_ACTIVE)); 47 PetscCallCeed(ceed, CeedOperatorSetField(op_setup_sur, "weight", CEED_ELEMRESTRICTION_NONE, ceed_data->basis_x_sur, CEED_VECTOR_NONE)); 48 PetscCallCeed(ceed, CeedOperatorSetField(op_setup_sur, "surface qdata", elem_restr_qd_i_sur, CEED_BASIS_NONE, CEED_VECTOR_ACTIVE)); 49 50 // ----- CEED Operator for Physics 51 PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_apply_bc, NULL, NULL, &op_apply_bc)); 52 PetscCallCeed(ceed, CeedOperatorSetField(op_apply_bc, "q", elem_restr_q_sur, ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE)); 53 PetscCallCeed(ceed, CeedOperatorSetField(op_apply_bc, "Grad_q", elem_restr_q_sur, ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE)); 54 PetscCallCeed(ceed, CeedOperatorSetField(op_apply_bc, "surface qdata", elem_restr_qd_i_sur, CEED_BASIS_NONE, q_data_sur)); 55 PetscCallCeed(ceed, CeedOperatorSetField(op_apply_bc, "x", elem_restr_x_sur, ceed_data->basis_x_sur, ceed_data->x_coord)); 56 PetscCallCeed(ceed, CeedOperatorSetField(op_apply_bc, "v", elem_restr_q_sur, ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE)); 57 if (elem_restr_jd_i_sur) 58 PetscCallCeed(ceed, CeedOperatorSetField(op_apply_bc, "surface jacobian data", elem_restr_jd_i_sur, CEED_BASIS_NONE, jac_data_sur)); 59 60 if (qf_apply_bc_jacobian) { 61 PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_apply_bc_jacobian, NULL, NULL, &op_apply_bc_jacobian)); 62 PetscCallCeed(ceed, CeedOperatorSetField(op_apply_bc_jacobian, "dq", elem_restr_q_sur, ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE)); 63 PetscCallCeed(ceed, CeedOperatorSetField(op_apply_bc_jacobian, "Grad_dq", elem_restr_q_sur, ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE)); 64 PetscCallCeed(ceed, CeedOperatorSetField(op_apply_bc_jacobian, "surface qdata", elem_restr_qd_i_sur, CEED_BASIS_NONE, q_data_sur)); 65 PetscCallCeed(ceed, CeedOperatorSetField(op_apply_bc_jacobian, "x", elem_restr_x_sur, ceed_data->basis_x_sur, ceed_data->x_coord)); 66 PetscCallCeed(ceed, CeedOperatorSetField(op_apply_bc_jacobian, "surface jacobian data", elem_restr_jd_i_sur, CEED_BASIS_NONE, jac_data_sur)); 67 PetscCallCeed(ceed, CeedOperatorSetField(op_apply_bc_jacobian, "v", elem_restr_q_sur, ceed_data->basis_q_sur, CEED_VECTOR_ACTIVE)); 68 } 69 70 // ----- Apply CEED operator for Setup 71 PetscCallCeed(ceed, CeedOperatorApply(op_setup_sur, ceed_data->x_coord, q_data_sur, CEED_REQUEST_IMMEDIATE)); 72 73 // ----- Apply Sub-Operator for Physics 74 PetscCallCeed(ceed, CeedCompositeOperatorAddSub(*op_apply, op_apply_bc)); 75 if (op_apply_bc_jacobian) PetscCallCeed(ceed, CeedCompositeOperatorAddSub(*op_apply_ijacobian, op_apply_bc_jacobian)); 76 77 // ----- Cleanup 78 PetscCallCeed(ceed, CeedVectorDestroy(&q_data_sur)); 79 PetscCallCeed(ceed, CeedVectorDestroy(&jac_data_sur)); 80 PetscCallCeed(ceed, CeedElemRestrictionDestroy(&elem_restr_q_sur)); 81 PetscCallCeed(ceed, CeedElemRestrictionDestroy(&elem_restr_x_sur)); 82 PetscCallCeed(ceed, CeedElemRestrictionDestroy(&elem_restr_qd_i_sur)); 83 PetscCallCeed(ceed, CeedElemRestrictionDestroy(&elem_restr_jd_i_sur)); 84 PetscCallCeed(ceed, CeedOperatorDestroy(&op_setup_sur)); 85 PetscCallCeed(ceed, CeedOperatorDestroy(&op_apply_bc)); 86 PetscCallCeed(ceed, CeedOperatorDestroy(&op_apply_bc_jacobian)); 87 PetscFunctionReturn(PETSC_SUCCESS); 88 } 89 90 // Utility function to create CEED Composite Operator for the entire domain 91 PetscErrorCode CreateOperatorForDomain(Ceed ceed, DM dm, SimpleBC bc, CeedData ceed_data, Physics phys, CeedOperator op_apply_vol, 92 CeedOperator op_apply_ijacobian_vol, CeedInt height, CeedInt P_sur, CeedInt Q_sur, CeedInt q_data_size_sur, 93 CeedInt jac_data_size_sur, CeedOperator *op_apply, CeedOperator *op_apply_ijacobian) { 94 DMLabel domain_label; 95 96 PetscFunctionBeginUser; 97 // Create Composite Operaters 98 PetscCallCeed(ceed, CeedCompositeOperatorCreate(ceed, op_apply)); 99 if (op_apply_ijacobian) PetscCallCeed(ceed, CeedCompositeOperatorCreate(ceed, op_apply_ijacobian)); 100 101 // --Apply Sub-Operator for the volume 102 PetscCallCeed(ceed, CeedCompositeOperatorAddSub(*op_apply, op_apply_vol)); 103 if (op_apply_ijacobian) PetscCallCeed(ceed, CeedCompositeOperatorAddSub(*op_apply_ijacobian, op_apply_ijacobian_vol)); 104 105 // -- Create Sub-Operator for in/outflow BCs 106 if (phys->has_neumann || 1) { 107 // --- Setup 108 PetscCall(DMGetLabel(dm, "Face Sets", &domain_label)); 109 110 // --- Create Sub-Operator for inflow boundaries 111 for (CeedInt i = 0; i < bc->num_inflow; i++) { 112 PetscCall(AddBCSubOperator(ceed, dm, ceed_data, domain_label, bc->inflows[i], height, Q_sur, q_data_size_sur, jac_data_size_sur, 113 ceed_data->qf_apply_inflow, ceed_data->qf_apply_inflow_jacobian, op_apply, op_apply_ijacobian)); 114 } 115 // --- Create Sub-Operator for outflow boundaries 116 for (CeedInt i = 0; i < bc->num_outflow; i++) { 117 PetscCall(AddBCSubOperator(ceed, dm, ceed_data, domain_label, bc->outflows[i], height, Q_sur, q_data_size_sur, jac_data_size_sur, 118 ceed_data->qf_apply_outflow, ceed_data->qf_apply_outflow_jacobian, op_apply, op_apply_ijacobian)); 119 } 120 // --- Create Sub-Operator for freestream boundaries 121 for (CeedInt i = 0; i < bc->num_freestream; i++) { 122 PetscCall(AddBCSubOperator(ceed, dm, ceed_data, domain_label, bc->freestreams[i], height, Q_sur, q_data_size_sur, jac_data_size_sur, 123 ceed_data->qf_apply_freestream, ceed_data->qf_apply_freestream_jacobian, op_apply, op_apply_ijacobian)); 124 } 125 } 126 127 // ----- Get Context Labels for Operator 128 PetscCallCeed(ceed, CeedOperatorGetContextFieldLabel(*op_apply, "solution time", &phys->solution_time_label)); 129 PetscCallCeed(ceed, CeedOperatorGetContextFieldLabel(*op_apply, "timestep size", &phys->timestep_size_label)); 130 PetscFunctionReturn(PETSC_SUCCESS); 131 } 132 133 PetscErrorCode SetupBCQFunctions(Ceed ceed, PetscInt dim_sur, PetscInt num_comp_x, PetscInt num_comp_q, PetscInt q_data_size_sur, 134 PetscInt jac_data_size_sur, ProblemQFunctionSpec apply_bc, ProblemQFunctionSpec apply_bc_jacobian, 135 CeedQFunction *qf_apply_bc, CeedQFunction *qf_apply_bc_jacobian) { 136 PetscFunctionBeginUser; 137 if (apply_bc.qfunction) { 138 PetscCallCeed(ceed, CeedQFunctionCreateInterior(ceed, 1, apply_bc.qfunction, apply_bc.qfunction_loc, qf_apply_bc)); 139 PetscCallCeed(ceed, CeedQFunctionSetContext(*qf_apply_bc, apply_bc.qfunction_context)); 140 PetscCallCeed(ceed, CeedQFunctionAddInput(*qf_apply_bc, "q", num_comp_q, CEED_EVAL_INTERP)); 141 PetscCallCeed(ceed, CeedQFunctionAddInput(*qf_apply_bc, "Grad_q", num_comp_q * dim_sur, CEED_EVAL_GRAD)); 142 PetscCallCeed(ceed, CeedQFunctionAddInput(*qf_apply_bc, "surface qdata", q_data_size_sur, CEED_EVAL_NONE)); 143 PetscCallCeed(ceed, CeedQFunctionAddInput(*qf_apply_bc, "x", num_comp_x, CEED_EVAL_INTERP)); 144 PetscCallCeed(ceed, CeedQFunctionAddOutput(*qf_apply_bc, "v", num_comp_q, CEED_EVAL_INTERP)); 145 if (jac_data_size_sur) PetscCallCeed(ceed, CeedQFunctionAddOutput(*qf_apply_bc, "surface jacobian data", jac_data_size_sur, CEED_EVAL_NONE)); 146 } 147 if (apply_bc_jacobian.qfunction) { 148 PetscCallCeed(ceed, CeedQFunctionCreateInterior(ceed, 1, apply_bc_jacobian.qfunction, apply_bc_jacobian.qfunction_loc, qf_apply_bc_jacobian)); 149 PetscCallCeed(ceed, CeedQFunctionSetContext(*qf_apply_bc_jacobian, apply_bc_jacobian.qfunction_context)); 150 PetscCallCeed(ceed, CeedQFunctionAddInput(*qf_apply_bc_jacobian, "dq", num_comp_q, CEED_EVAL_INTERP)); 151 PetscCallCeed(ceed, CeedQFunctionAddInput(*qf_apply_bc_jacobian, "Grad_dq", num_comp_q * dim_sur, CEED_EVAL_GRAD)); 152 PetscCallCeed(ceed, CeedQFunctionAddInput(*qf_apply_bc_jacobian, "surface qdata", q_data_size_sur, CEED_EVAL_NONE)); 153 PetscCallCeed(ceed, CeedQFunctionAddInput(*qf_apply_bc_jacobian, "x", num_comp_x, CEED_EVAL_INTERP)); 154 PetscCallCeed(ceed, CeedQFunctionAddInput(*qf_apply_bc_jacobian, "surface jacobian data", jac_data_size_sur, CEED_EVAL_NONE)); 155 PetscCallCeed(ceed, CeedQFunctionAddOutput(*qf_apply_bc_jacobian, "v", num_comp_q, CEED_EVAL_INTERP)); 156 } 157 PetscFunctionReturn(PETSC_SUCCESS); 158 } 159 160 PetscErrorCode SetupLibceed(Ceed ceed, CeedData ceed_data, DM dm, User user, AppCtx app_ctx, ProblemData *problem, SimpleBC bc) { 161 PetscFunctionBeginUser; 162 // ***************************************************************************** 163 // Set up CEED objects for the interior domain (volume) 164 // ***************************************************************************** 165 const PetscInt num_comp_q = 5; 166 const CeedInt dim = problem->dim, num_comp_x = problem->dim, q_data_size_vol = problem->q_data_size_vol, jac_data_size_vol = num_comp_q + 6 + 3; 167 CeedElemRestriction elem_restr_jd_i; 168 CeedVector jac_data; 169 CeedInt num_qpts; 170 DMLabel domain_label = NULL; 171 PetscInt label_value = 0, height = 0, dm_field = 0; 172 173 // ----------------------------------------------------------------------------- 174 // CEED Bases 175 // ----------------------------------------------------------------------------- 176 DM dm_coord; 177 PetscCall(DMGetCoordinateDM(dm, &dm_coord)); 178 179 PetscCall(CreateBasisFromPlex(ceed, dm, domain_label, label_value, height, dm_field, &ceed_data->basis_q)); 180 PetscCall(CreateBasisFromPlex(ceed, dm_coord, domain_label, label_value, height, dm_field, &ceed_data->basis_x)); 181 PetscCallCeed(ceed, CeedBasisCreateProjection(ceed_data->basis_x, ceed_data->basis_q, &ceed_data->basis_xc)); 182 PetscCallCeed(ceed, CeedBasisGetNumQuadraturePoints(ceed_data->basis_q, &num_qpts)); 183 184 // ----------------------------------------------------------------------------- 185 // CEED Restrictions 186 // ----------------------------------------------------------------------------- 187 // -- Create restriction 188 PetscCall(DMPlexCeedElemRestrictionCreate(ceed, dm, domain_label, label_value, height, 0, &ceed_data->elem_restr_q)); 189 PetscCall(DMPlexCeedElemRestrictionCoordinateCreate(ceed, dm, domain_label, label_value, height, &ceed_data->elem_restr_x)); 190 PetscCall(DMPlexCeedElemRestrictionQDataCreate(ceed, dm, domain_label, label_value, height, q_data_size_vol, &ceed_data->elem_restr_qd_i)); 191 PetscCall(DMPlexCeedElemRestrictionQDataCreate(ceed, dm, domain_label, label_value, height, jac_data_size_vol, &elem_restr_jd_i)); 192 // -- Create E vectors 193 PetscCallCeed(ceed, CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->q_ceed, NULL)); 194 PetscCallCeed(ceed, CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->q_dot_ceed, NULL)); 195 PetscCallCeed(ceed, CeedElemRestrictionCreateVector(ceed_data->elem_restr_q, &user->g_ceed, NULL)); 196 197 // ----------------------------------------------------------------------------- 198 // CEED QFunctions 199 // ----------------------------------------------------------------------------- 200 // -- Create QFunction for quadrature data 201 PetscCallCeed(ceed, CeedQFunctionCreateInterior(ceed, 1, problem->setup_vol.qfunction, problem->setup_vol.qfunction_loc, &ceed_data->qf_setup_vol)); 202 if (problem->setup_vol.qfunction_context) { 203 PetscCallCeed(ceed, CeedQFunctionSetContext(ceed_data->qf_setup_vol, problem->setup_vol.qfunction_context)); 204 } 205 PetscCallCeed(ceed, CeedQFunctionAddInput(ceed_data->qf_setup_vol, "dx", num_comp_x * dim, CEED_EVAL_GRAD)); 206 PetscCallCeed(ceed, CeedQFunctionAddInput(ceed_data->qf_setup_vol, "weight", 1, CEED_EVAL_WEIGHT)); 207 PetscCallCeed(ceed, CeedQFunctionAddOutput(ceed_data->qf_setup_vol, "qdata", q_data_size_vol, CEED_EVAL_NONE)); 208 209 // -- Create QFunction for ICs 210 PetscCallCeed(ceed, CeedQFunctionCreateInterior(ceed, 1, problem->ics.qfunction, problem->ics.qfunction_loc, &ceed_data->qf_ics)); 211 PetscCallCeed(ceed, CeedQFunctionSetContext(ceed_data->qf_ics, problem->ics.qfunction_context)); 212 PetscCallCeed(ceed, CeedQFunctionAddInput(ceed_data->qf_ics, "x", num_comp_x, CEED_EVAL_INTERP)); 213 PetscCallCeed(ceed, CeedQFunctionAddInput(ceed_data->qf_ics, "dx", num_comp_x * dim, CEED_EVAL_GRAD)); 214 PetscCallCeed(ceed, CeedQFunctionAddOutput(ceed_data->qf_ics, "q0", num_comp_q, CEED_EVAL_NONE)); 215 216 // -- Create QFunction for RHS 217 if (problem->apply_vol_rhs.qfunction) { 218 PetscCallCeed( 219 ceed, CeedQFunctionCreateInterior(ceed, 1, problem->apply_vol_rhs.qfunction, problem->apply_vol_rhs.qfunction_loc, &ceed_data->qf_rhs_vol)); 220 PetscCallCeed(ceed, CeedQFunctionSetContext(ceed_data->qf_rhs_vol, problem->apply_vol_rhs.qfunction_context)); 221 PetscCallCeed(ceed, CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "q", num_comp_q, CEED_EVAL_INTERP)); 222 PetscCallCeed(ceed, CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "Grad_q", num_comp_q * dim, CEED_EVAL_GRAD)); 223 PetscCallCeed(ceed, CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "qdata", q_data_size_vol, CEED_EVAL_NONE)); 224 PetscCallCeed(ceed, CeedQFunctionAddInput(ceed_data->qf_rhs_vol, "x", num_comp_x, CEED_EVAL_INTERP)); 225 PetscCallCeed(ceed, CeedQFunctionAddOutput(ceed_data->qf_rhs_vol, "v", num_comp_q, CEED_EVAL_INTERP)); 226 PetscCallCeed(ceed, CeedQFunctionAddOutput(ceed_data->qf_rhs_vol, "Grad_v", num_comp_q * dim, CEED_EVAL_GRAD)); 227 } 228 229 // -- Create QFunction for IFunction 230 if (problem->apply_vol_ifunction.qfunction) { 231 PetscCallCeed(ceed, CeedQFunctionCreateInterior(ceed, 1, problem->apply_vol_ifunction.qfunction, problem->apply_vol_ifunction.qfunction_loc, 232 &ceed_data->qf_ifunction_vol)); 233 PetscCallCeed(ceed, CeedQFunctionSetContext(ceed_data->qf_ifunction_vol, problem->apply_vol_ifunction.qfunction_context)); 234 PetscCallCeed(ceed, CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "q", num_comp_q, CEED_EVAL_INTERP)); 235 PetscCallCeed(ceed, CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "Grad_q", num_comp_q * dim, CEED_EVAL_GRAD)); 236 PetscCallCeed(ceed, CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "q dot", num_comp_q, CEED_EVAL_INTERP)); 237 PetscCallCeed(ceed, CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "qdata", q_data_size_vol, CEED_EVAL_NONE)); 238 PetscCallCeed(ceed, CeedQFunctionAddInput(ceed_data->qf_ifunction_vol, "x", num_comp_x, CEED_EVAL_INTERP)); 239 PetscCallCeed(ceed, CeedQFunctionAddOutput(ceed_data->qf_ifunction_vol, "v", num_comp_q, CEED_EVAL_INTERP)); 240 PetscCallCeed(ceed, CeedQFunctionAddOutput(ceed_data->qf_ifunction_vol, "Grad_v", num_comp_q * dim, CEED_EVAL_GRAD)); 241 PetscCallCeed(ceed, CeedQFunctionAddOutput(ceed_data->qf_ifunction_vol, "jac_data", jac_data_size_vol, CEED_EVAL_NONE)); 242 } 243 244 CeedQFunction qf_ijacobian_vol = NULL; 245 if (problem->apply_vol_ijacobian.qfunction) { 246 PetscCallCeed(ceed, CeedQFunctionCreateInterior(ceed, 1, problem->apply_vol_ijacobian.qfunction, problem->apply_vol_ijacobian.qfunction_loc, 247 &qf_ijacobian_vol)); 248 PetscCallCeed(ceed, CeedQFunctionSetContext(qf_ijacobian_vol, problem->apply_vol_ijacobian.qfunction_context)); 249 PetscCallCeed(ceed, CeedQFunctionAddInput(qf_ijacobian_vol, "dq", num_comp_q, CEED_EVAL_INTERP)); 250 PetscCallCeed(ceed, CeedQFunctionAddInput(qf_ijacobian_vol, "Grad_dq", num_comp_q * dim, CEED_EVAL_GRAD)); 251 PetscCallCeed(ceed, CeedQFunctionAddInput(qf_ijacobian_vol, "qdata", q_data_size_vol, CEED_EVAL_NONE)); 252 PetscCallCeed(ceed, CeedQFunctionAddInput(qf_ijacobian_vol, "x", num_comp_x, CEED_EVAL_INTERP)); 253 PetscCallCeed(ceed, CeedQFunctionAddInput(qf_ijacobian_vol, "jac_data", jac_data_size_vol, CEED_EVAL_NONE)); 254 PetscCallCeed(ceed, CeedQFunctionAddOutput(qf_ijacobian_vol, "v", num_comp_q, CEED_EVAL_INTERP)); 255 PetscCallCeed(ceed, CeedQFunctionAddOutput(qf_ijacobian_vol, "Grad_v", num_comp_q * dim, CEED_EVAL_GRAD)); 256 } 257 258 // --------------------------------------------------------------------------- 259 // Element coordinates 260 // --------------------------------------------------------------------------- 261 // -- Create CEED vector 262 PetscCallCeed(ceed, CeedElemRestrictionCreateVector(ceed_data->elem_restr_x, &ceed_data->x_coord, NULL)); 263 264 // -- Copy PETSc vector in CEED vector 265 Vec X_loc; 266 { 267 DM cdm; 268 PetscCall(DMGetCellCoordinateDM(dm, &cdm)); 269 if (cdm) { 270 PetscCall(DMGetCellCoordinatesLocal(dm, &X_loc)); 271 } else { 272 PetscCall(DMGetCoordinatesLocal(dm, &X_loc)); 273 } 274 } 275 PetscCall(VecScale(X_loc, problem->dm_scale)); 276 PetscCall(VecCopyP2C(X_loc, ceed_data->x_coord)); 277 278 // ----------------------------------------------------------------------------- 279 // CEED vectors 280 // ----------------------------------------------------------------------------- 281 // -- Create CEED vector for geometric data 282 PetscCallCeed(ceed, CeedElemRestrictionCreateVector(ceed_data->elem_restr_qd_i, &ceed_data->q_data, NULL)); 283 PetscCallCeed(ceed, CeedElemRestrictionCreateVector(elem_restr_jd_i, &jac_data, NULL)); 284 285 // ----------------------------------------------------------------------------- 286 // CEED Operators 287 // ----------------------------------------------------------------------------- 288 // -- Create CEED operator for quadrature data 289 PetscCallCeed(ceed, CeedOperatorCreate(ceed, ceed_data->qf_setup_vol, NULL, NULL, &ceed_data->op_setup_vol)); 290 PetscCallCeed(ceed, CeedOperatorSetField(ceed_data->op_setup_vol, "dx", ceed_data->elem_restr_x, ceed_data->basis_x, CEED_VECTOR_ACTIVE)); 291 PetscCallCeed(ceed, CeedOperatorSetField(ceed_data->op_setup_vol, "weight", CEED_ELEMRESTRICTION_NONE, ceed_data->basis_x, CEED_VECTOR_NONE)); 292 PetscCallCeed(ceed, CeedOperatorSetField(ceed_data->op_setup_vol, "qdata", ceed_data->elem_restr_qd_i, CEED_BASIS_NONE, CEED_VECTOR_ACTIVE)); 293 294 // -- Create CEED operator for ICs 295 CeedOperator op_ics; 296 PetscCallCeed(ceed, CeedOperatorCreate(ceed, ceed_data->qf_ics, NULL, NULL, &op_ics)); 297 PetscCallCeed(ceed, CeedOperatorSetField(op_ics, "x", ceed_data->elem_restr_x, ceed_data->basis_xc, CEED_VECTOR_ACTIVE)); 298 PetscCallCeed(ceed, CeedOperatorSetField(op_ics, "dx", ceed_data->elem_restr_x, ceed_data->basis_xc, CEED_VECTOR_ACTIVE)); 299 PetscCallCeed(ceed, CeedOperatorSetField(op_ics, "q0", ceed_data->elem_restr_q, CEED_BASIS_NONE, CEED_VECTOR_ACTIVE)); 300 PetscCallCeed(ceed, CeedOperatorGetContextFieldLabel(op_ics, "evaluation time", &user->phys->ics_time_label)); 301 PetscCall(OperatorApplyContextCreate(NULL, dm, user->ceed, op_ics, ceed_data->x_coord, NULL, NULL, user->Q_loc, &ceed_data->op_ics_ctx)); 302 PetscCallCeed(ceed, CeedOperatorDestroy(&op_ics)); 303 304 // Create CEED operator for RHS 305 if (ceed_data->qf_rhs_vol) { 306 CeedOperator op; 307 PetscCallCeed(ceed, CeedOperatorCreate(ceed, ceed_data->qf_rhs_vol, NULL, NULL, &op)); 308 PetscCallCeed(ceed, CeedOperatorSetField(op, "q", ceed_data->elem_restr_q, ceed_data->basis_q, CEED_VECTOR_ACTIVE)); 309 PetscCallCeed(ceed, CeedOperatorSetField(op, "Grad_q", ceed_data->elem_restr_q, ceed_data->basis_q, CEED_VECTOR_ACTIVE)); 310 PetscCallCeed(ceed, CeedOperatorSetField(op, "qdata", ceed_data->elem_restr_qd_i, CEED_BASIS_NONE, ceed_data->q_data)); 311 PetscCallCeed(ceed, CeedOperatorSetField(op, "x", ceed_data->elem_restr_x, ceed_data->basis_x, ceed_data->x_coord)); 312 PetscCallCeed(ceed, CeedOperatorSetField(op, "v", ceed_data->elem_restr_q, ceed_data->basis_q, CEED_VECTOR_ACTIVE)); 313 PetscCallCeed(ceed, CeedOperatorSetField(op, "Grad_v", ceed_data->elem_restr_q, ceed_data->basis_q, CEED_VECTOR_ACTIVE)); 314 user->op_rhs_vol = op; 315 } 316 317 // -- CEED operator for IFunction 318 if (ceed_data->qf_ifunction_vol) { 319 CeedOperator op; 320 PetscCallCeed(ceed, CeedOperatorCreate(ceed, ceed_data->qf_ifunction_vol, NULL, NULL, &op)); 321 PetscCallCeed(ceed, CeedOperatorSetField(op, "q", ceed_data->elem_restr_q, ceed_data->basis_q, CEED_VECTOR_ACTIVE)); 322 PetscCallCeed(ceed, CeedOperatorSetField(op, "Grad_q", ceed_data->elem_restr_q, ceed_data->basis_q, CEED_VECTOR_ACTIVE)); 323 PetscCallCeed(ceed, CeedOperatorSetField(op, "q dot", ceed_data->elem_restr_q, ceed_data->basis_q, user->q_dot_ceed)); 324 PetscCallCeed(ceed, CeedOperatorSetField(op, "qdata", ceed_data->elem_restr_qd_i, CEED_BASIS_NONE, ceed_data->q_data)); 325 PetscCallCeed(ceed, CeedOperatorSetField(op, "x", ceed_data->elem_restr_x, ceed_data->basis_x, ceed_data->x_coord)); 326 PetscCallCeed(ceed, CeedOperatorSetField(op, "v", ceed_data->elem_restr_q, ceed_data->basis_q, CEED_VECTOR_ACTIVE)); 327 PetscCallCeed(ceed, CeedOperatorSetField(op, "Grad_v", ceed_data->elem_restr_q, ceed_data->basis_q, CEED_VECTOR_ACTIVE)); 328 PetscCallCeed(ceed, CeedOperatorSetField(op, "jac_data", elem_restr_jd_i, CEED_BASIS_NONE, jac_data)); 329 330 user->op_ifunction_vol = op; 331 } 332 333 CeedOperator op_ijacobian_vol = NULL; 334 if (qf_ijacobian_vol) { 335 CeedOperator op; 336 PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_ijacobian_vol, NULL, NULL, &op)); 337 PetscCallCeed(ceed, CeedOperatorSetField(op, "dq", ceed_data->elem_restr_q, ceed_data->basis_q, CEED_VECTOR_ACTIVE)); 338 PetscCallCeed(ceed, CeedOperatorSetField(op, "Grad_dq", ceed_data->elem_restr_q, ceed_data->basis_q, CEED_VECTOR_ACTIVE)); 339 PetscCallCeed(ceed, CeedOperatorSetField(op, "qdata", ceed_data->elem_restr_qd_i, CEED_BASIS_NONE, ceed_data->q_data)); 340 PetscCallCeed(ceed, CeedOperatorSetField(op, "x", ceed_data->elem_restr_x, ceed_data->basis_x, ceed_data->x_coord)); 341 PetscCallCeed(ceed, CeedOperatorSetField(op, "jac_data", elem_restr_jd_i, CEED_BASIS_NONE, jac_data)); 342 PetscCallCeed(ceed, CeedOperatorSetField(op, "v", ceed_data->elem_restr_q, ceed_data->basis_q, CEED_VECTOR_ACTIVE)); 343 PetscCallCeed(ceed, CeedOperatorSetField(op, "Grad_v", ceed_data->elem_restr_q, ceed_data->basis_q, CEED_VECTOR_ACTIVE)); 344 op_ijacobian_vol = op; 345 PetscCallCeed(ceed, CeedQFunctionDestroy(&qf_ijacobian_vol)); 346 } 347 348 // ***************************************************************************** 349 // Set up CEED objects for the exterior domain (surface) 350 // ***************************************************************************** 351 height = 1; 352 CeedInt dim_sur = dim - height, P_sur = app_ctx->degree + 1, Q_sur = P_sur + app_ctx->q_extra; 353 const CeedInt q_data_size_sur = problem->q_data_size_sur, jac_data_size_sur = problem->jac_data_size_sur; 354 355 // ----------------------------------------------------------------------------- 356 // CEED Bases 357 // ----------------------------------------------------------------------------- 358 359 DMLabel label = 0; 360 PetscInt face_id = 0; 361 PetscInt field = 0; // Still want the normal, default field 362 PetscCall(CreateBasisFromPlex(ceed, dm, label, face_id, height, field, &ceed_data->basis_q_sur)); 363 PetscCall(CreateBasisFromPlex(ceed, dm_coord, label, face_id, height, field, &ceed_data->basis_x_sur)); 364 PetscCallCeed(ceed, CeedBasisCreateProjection(ceed_data->basis_x_sur, ceed_data->basis_q_sur, &ceed_data->basis_xc_sur)); 365 366 // ----------------------------------------------------------------------------- 367 // CEED QFunctions 368 // ----------------------------------------------------------------------------- 369 // -- Create QFunction for quadrature data 370 PetscCallCeed(ceed, CeedQFunctionCreateInterior(ceed, 1, problem->setup_sur.qfunction, problem->setup_sur.qfunction_loc, &ceed_data->qf_setup_sur)); 371 if (problem->setup_sur.qfunction_context) { 372 PetscCallCeed(ceed, CeedQFunctionSetContext(ceed_data->qf_setup_sur, problem->setup_sur.qfunction_context)); 373 } 374 PetscCallCeed(ceed, CeedQFunctionAddInput(ceed_data->qf_setup_sur, "dx", num_comp_x * dim_sur, CEED_EVAL_GRAD)); 375 PetscCallCeed(ceed, CeedQFunctionAddInput(ceed_data->qf_setup_sur, "weight", 1, CEED_EVAL_WEIGHT)); 376 PetscCallCeed(ceed, CeedQFunctionAddOutput(ceed_data->qf_setup_sur, "surface qdata", q_data_size_sur, CEED_EVAL_NONE)); 377 378 PetscCall(SetupBCQFunctions(ceed, dim_sur, num_comp_x, num_comp_q, q_data_size_sur, jac_data_size_sur, problem->apply_inflow, 379 problem->apply_inflow_jacobian, &ceed_data->qf_apply_inflow, &ceed_data->qf_apply_inflow_jacobian)); 380 PetscCall(SetupBCQFunctions(ceed, dim_sur, num_comp_x, num_comp_q, q_data_size_sur, jac_data_size_sur, problem->apply_outflow, 381 problem->apply_outflow_jacobian, &ceed_data->qf_apply_outflow, &ceed_data->qf_apply_outflow_jacobian)); 382 PetscCall(SetupBCQFunctions(ceed, dim_sur, num_comp_x, num_comp_q, q_data_size_sur, jac_data_size_sur, problem->apply_freestream, 383 problem->apply_freestream_jacobian, &ceed_data->qf_apply_freestream, &ceed_data->qf_apply_freestream_jacobian)); 384 385 // ***************************************************************************** 386 // CEED Operator Apply 387 // ***************************************************************************** 388 // -- Apply CEED Operator for the geometric data 389 PetscCallCeed(ceed, CeedOperatorApply(ceed_data->op_setup_vol, ceed_data->x_coord, ceed_data->q_data, CEED_REQUEST_IMMEDIATE)); 390 391 // -- Create and apply CEED Composite Operator for the entire domain 392 if (!user->phys->implicit) { // RHS 393 CeedOperator op_rhs; 394 PetscCall(CreateOperatorForDomain(ceed, dm, bc, ceed_data, user->phys, user->op_rhs_vol, NULL, height, P_sur, Q_sur, q_data_size_sur, 0, &op_rhs, 395 NULL)); 396 PetscCall(OperatorApplyContextCreate(dm, dm, ceed, op_rhs, user->q_ceed, user->g_ceed, user->Q_loc, NULL, &user->op_rhs_ctx)); 397 PetscCallCeed(ceed, CeedOperatorDestroy(&op_rhs)); 398 } else { // IFunction 399 PetscCall(CreateOperatorForDomain(ceed, dm, bc, ceed_data, user->phys, user->op_ifunction_vol, op_ijacobian_vol, height, P_sur, Q_sur, 400 q_data_size_sur, jac_data_size_sur, &user->op_ifunction, op_ijacobian_vol ? &user->op_ijacobian : NULL)); 401 if (user->op_ijacobian) { 402 PetscCallCeed(ceed, CeedOperatorGetContextFieldLabel(user->op_ijacobian, "ijacobian time shift", &user->phys->ijacobian_time_shift_label)); 403 } 404 if (problem->use_strong_bc_ceed) PetscCall(SetupStrongBC_Ceed(ceed, ceed_data, dm, user, problem, bc)); 405 if (app_ctx->sgs_model_type == SGS_MODEL_DATA_DRIVEN) PetscCall(SgsDDModelSetup(ceed, user, ceed_data, problem)); 406 } 407 408 if (app_ctx->turb_spanstats_enable) PetscCall(TurbulenceStatisticsSetup(ceed, user, ceed_data, problem)); 409 if (app_ctx->diff_filter_monitor) PetscCall(DifferentialFilterSetup(ceed, user, ceed_data, problem)); 410 411 PetscCallCeed(ceed, CeedElemRestrictionDestroy(&elem_restr_jd_i)); 412 PetscCallCeed(ceed, CeedOperatorDestroy(&op_ijacobian_vol)); 413 PetscCallCeed(ceed, CeedVectorDestroy(&jac_data)); 414 PetscFunctionReturn(PETSC_SUCCESS); 415 } 416