151ee423eSJames Wright // Copyright (c) 2017-2022, Lawrence Livermore National Security, LLC and other CEED contributors. 251ee423eSJames Wright // All Rights Reserved. See the top-level LICENSE and NOTICE files for details. 351ee423eSJames Wright // 451ee423eSJames Wright // SPDX-License-Identifier: BSD-2-Clause 551ee423eSJames Wright // 651ee423eSJames Wright // This file is part of CEED: http://github.com/ceed 751ee423eSJames Wright /// @file 8*a175e481SJames Wright /// Functions for setting up and performing statistics collection 9*a175e481SJames Wright 10*a175e481SJames Wright #include "../qfunctions/turb_spanstats.h" 1151ee423eSJames Wright 1219706a06SJames Wright #include <petscsf.h> 1319706a06SJames Wright 14*a175e481SJames Wright #include "../include/matops.h" 1551ee423eSJames Wright #include "../navierstokes.h" 16*a175e481SJames Wright #include "ceed/ceed.h" 17*a175e481SJames Wright #include "petscerror.h" 18*a175e481SJames Wright #include "petscmat.h" 1919706a06SJames Wright #include "petscsys.h" 20*a175e481SJames Wright #include "petscvec.h" 2151ee423eSJames Wright 2251ee423eSJames Wright PetscErrorCode CreateStatsDM(User user, ProblemData *problem, PetscInt degree, SimpleBC bc) { 23*a175e481SJames Wright user->spanstats.num_comp_stats = 22; 24*a175e481SJames Wright PetscReal domain_min[3], domain_max[3]; 2551ee423eSJames Wright PetscFunctionBeginUser; 2651ee423eSJames Wright 27*a175e481SJames Wright // Get spanwise length 28*a175e481SJames Wright PetscCall(DMGetBoundingBox(user->dm, domain_min, domain_max)); 29*a175e481SJames Wright user->spanstats.span_width = domain_max[2] - domain_min[1]; 30*a175e481SJames Wright 3151ee423eSJames Wright // Get DM from surface 3251ee423eSJames Wright { 3351ee423eSJames Wright DMLabel label; 3451ee423eSJames Wright PetscCall(DMGetLabel(user->dm, "Face Sets", &label)); 3551ee423eSJames Wright PetscCall(DMPlexLabelComplete(user->dm, label)); 3651ee423eSJames Wright PetscCall(DMPlexFilter(user->dm, label, 1, &user->spanstats.dm)); 3751ee423eSJames Wright PetscCall(DMProjectCoordinates(user->spanstats.dm, NULL)); // Ensure that a coordinate FE exists 3851ee423eSJames Wright } 3951ee423eSJames Wright 4051ee423eSJames Wright PetscCall(PetscObjectSetName((PetscObject)user->spanstats.dm, "Spanwise_Stats")); 4151ee423eSJames Wright PetscCall(DMSetOptionsPrefix(user->spanstats.dm, "spanstats_")); 4251ee423eSJames Wright PetscCall(DMSetFromOptions(user->spanstats.dm)); 43*a175e481SJames Wright PetscCall(DMViewFromOptions(user->spanstats.dm, NULL, "-dm_view")); // -spanstats_dm_view 4451ee423eSJames Wright { 4551ee423eSJames Wright PetscFE fe; 4651ee423eSJames Wright DMLabel label; 4751ee423eSJames Wright 4851ee423eSJames Wright PetscCall(PetscFECreateLagrange(PETSC_COMM_SELF, problem->dim - 1, user->spanstats.num_comp_stats, PETSC_FALSE, degree, PETSC_DECIDE, &fe)); 4951ee423eSJames Wright PetscCall(PetscObjectSetName((PetscObject)fe, "stats")); 5051ee423eSJames Wright PetscCall(DMAddField(user->spanstats.dm, NULL, (PetscObject)fe)); 5151ee423eSJames Wright PetscCall(DMCreateDS(user->spanstats.dm)); 5251ee423eSJames Wright PetscCall(DMGetLabel(user->spanstats.dm, "Face Sets", &label)); 5351ee423eSJames Wright 5451ee423eSJames Wright PetscCall(DMPlexSetClosurePermutationTensor(user->spanstats.dm, PETSC_DETERMINE, NULL)); 5551ee423eSJames Wright PetscCall(PetscFEDestroy(&fe)); 5651ee423eSJames Wright } 5751ee423eSJames Wright 5851ee423eSJames Wright PetscSection section; 5951ee423eSJames Wright PetscCall(DMGetLocalSection(user->spanstats.dm, §ion)); 6051ee423eSJames Wright PetscCall(PetscSectionSetFieldName(section, 0, "")); 61*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 0, "Mean Density")); 62*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 1, "Mean Pressure")); 63*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 2, "Mean Pressure Squared")); 64*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 3, "Mean Pressure Velocity X")); 65*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 4, "Mean Pressure Velocity Y")); 66*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 5, "Mean Pressure Velocity Z")); 67*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 6, "Mean Density Temperature")); 68*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 7, "Mean Density Temperature Flux X")); 69*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 8, "Mean Density Temperature Flux Y")); 70*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 9, "Mean Density Temperature Flux Z")); 71*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 10, "Mean Momentum X")); 72*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 11, "Mean Momentum Y")); 73*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 12, "Mean Momentum Z")); 74*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 13, "Mean Momentum Flux XX")); 75*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 14, "Mean Momentum Flux YY")); 76*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 15, "Mean Momentum Flux ZZ")); 77*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 16, "Mean Momentum Flux YZ")); 78*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 17, "Mean Momentum Flux XZ")); 79*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 18, "Mean Momentum Flux XY")); 80*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 19, "Mean Velocity X")); 81*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 20, "Mean Velocity Y")); 82*a175e481SJames Wright PetscCall(PetscSectionSetComponentName(section, 0, 21, "Mean Velocity Z")); 8319706a06SJames Wright 8419706a06SJames Wright PetscFunctionReturn(0); 8519706a06SJames Wright } 8619706a06SJames Wright 871737222fSJames Wright // Create CeedElemRestriction for collocated data based on associated CeedBasis and CeedElemRestriction 881737222fSJames Wright // Number of quadrature points is used from the CeedBasis, and number of elements is used from the CeedElemRestriction 891737222fSJames Wright PetscErrorCode CreateElemRestrColloc(Ceed ceed, CeedInt num_comp, CeedBasis basis, CeedElemRestriction elem_restr_base, 901737222fSJames Wright CeedElemRestriction *elem_restr_collocated, CeedVector *l_vec, CeedVector *e_vec) { 911737222fSJames Wright CeedInt num_elem_qpts, loc_num_elem; 921737222fSJames Wright PetscFunctionBeginUser; 931737222fSJames Wright 941737222fSJames Wright CeedBasisGetNumQuadraturePoints(basis, &num_elem_qpts); 951737222fSJames Wright CeedElemRestrictionGetNumElements(elem_restr_base, &loc_num_elem); 961737222fSJames Wright 971737222fSJames Wright const CeedInt strides[] = {num_comp, 1, num_elem_qpts * num_comp}; 981737222fSJames Wright CeedElemRestrictionCreateStrided(ceed, loc_num_elem, num_elem_qpts, num_comp, num_comp * loc_num_elem * num_elem_qpts, strides, 991737222fSJames Wright elem_restr_collocated); 1001737222fSJames Wright CeedElemRestrictionCreateVector(*elem_restr_collocated, l_vec, e_vec); 1011737222fSJames Wright PetscFunctionReturn(0); 1021737222fSJames Wright } 1031737222fSJames Wright 104*a175e481SJames Wright // Get coordinates of quadrature points 10519706a06SJames Wright PetscErrorCode GetQuadratureCoords(Ceed ceed, DM dm, CeedElemRestriction elem_restr_x, CeedBasis basis_x, CeedVector x_coords, CeedVector *qx_coords, 10619706a06SJames Wright PetscInt *total_nqpnts) { 10719706a06SJames Wright CeedQFunction qf_quad_coords; 10819706a06SJames Wright CeedOperator op_quad_coords; 10919706a06SJames Wright PetscInt num_comp_x, loc_num_elem, num_elem_qpts; 11019706a06SJames Wright CeedElemRestriction elem_restr_qx; 11119706a06SJames Wright PetscFunctionBeginUser; 11219706a06SJames Wright 11319706a06SJames Wright // Create Element Restriction and CeedVector for quadrature coordinates 11419706a06SJames Wright CeedBasisGetNumQuadraturePoints(basis_x, &num_elem_qpts); 11519706a06SJames Wright CeedElemRestrictionGetNumElements(elem_restr_x, &loc_num_elem); 11619706a06SJames Wright CeedElemRestrictionGetNumComponents(elem_restr_x, &num_comp_x); 11719706a06SJames Wright *total_nqpnts = num_elem_qpts * loc_num_elem; 1181737222fSJames Wright PetscCall(CreateElemRestrColloc(ceed, num_comp_x, basis_x, elem_restr_x, &elem_restr_qx, qx_coords, NULL)); 11919706a06SJames Wright 12019706a06SJames Wright // Create QFunction 12119706a06SJames Wright CeedQFunctionCreateIdentity(ceed, num_comp_x, CEED_EVAL_INTERP, CEED_EVAL_NONE, &qf_quad_coords); 12219706a06SJames Wright 12319706a06SJames Wright // Create Operator 12419706a06SJames Wright CeedOperatorCreate(ceed, qf_quad_coords, NULL, NULL, &op_quad_coords); 12519706a06SJames Wright CeedOperatorSetField(op_quad_coords, "input", elem_restr_x, basis_x, CEED_VECTOR_ACTIVE); 12619706a06SJames Wright CeedOperatorSetField(op_quad_coords, "output", elem_restr_qx, CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE); 12719706a06SJames Wright 12819706a06SJames Wright CeedOperatorApply(op_quad_coords, x_coords, *qx_coords, CEED_REQUEST_IMMEDIATE); 12919706a06SJames Wright 13019706a06SJames Wright CeedQFunctionDestroy(&qf_quad_coords); 13119706a06SJames Wright CeedOperatorDestroy(&op_quad_coords); 13219706a06SJames Wright PetscFunctionReturn(0); 13319706a06SJames Wright } 13419706a06SJames Wright 135*a175e481SJames Wright // Create PetscSF for child-to-parent communication 13619706a06SJames Wright PetscErrorCode CreateStatsSF(Ceed ceed, CeedData ceed_data, DM parentdm, DM childdm, PetscSF statssf) { 13719706a06SJames Wright PetscInt child_num_qpnts, parent_num_qpnts, num_comp_x; 13819706a06SJames Wright CeedVector child_qx_coords, parent_qx_coords; 13919706a06SJames Wright PetscReal *child_coords, *parent_coords; 14019706a06SJames Wright PetscFunctionBeginUser; 14119706a06SJames Wright 14219706a06SJames Wright // Assume that child and parent have the same number of components 14319706a06SJames Wright CeedBasisGetNumComponents(ceed_data->basis_x, &num_comp_x); 14419706a06SJames Wright const PetscInt num_comp_sf = num_comp_x - 1; // Number of coord components used in the creation of the SF 14519706a06SJames Wright 14619706a06SJames Wright // Get quad_coords for child DM 147*a175e481SJames Wright PetscCall(GetQuadratureCoords(ceed, childdm, ceed_data->elem_restr_x, ceed_data->basis_x, ceed_data->x_coord, &child_qx_coords, &child_num_qpnts)); 14819706a06SJames Wright 14919706a06SJames Wright // Get quad_coords for parent DM 15019706a06SJames Wright PetscCall(GetQuadratureCoords(ceed, parentdm, ceed_data->spanstats.elem_restr_parent_x, ceed_data->spanstats.basis_x, ceed_data->spanstats.x_coord, 15119706a06SJames Wright &parent_qx_coords, &parent_num_qpnts)); 15219706a06SJames Wright 15319706a06SJames Wright // Remove z component of coordinates for matching 15419706a06SJames Wright { 15519706a06SJames Wright const PetscReal *child_quad_coords, *parent_quad_coords; 15619706a06SJames Wright 15719706a06SJames Wright CeedVectorGetArrayRead(child_qx_coords, CEED_MEM_HOST, &child_quad_coords); 15819706a06SJames Wright CeedVectorGetArrayRead(parent_qx_coords, CEED_MEM_HOST, &parent_quad_coords); 15919706a06SJames Wright 16019706a06SJames Wright PetscCall(PetscMalloc2(child_num_qpnts * 2, &child_coords, parent_num_qpnts * 2, &parent_coords)); 16119706a06SJames Wright for (int i = 0; i < child_num_qpnts; i++) { 16219706a06SJames Wright child_coords[0 + i * num_comp_sf] = child_quad_coords[0 + i * num_comp_x]; 16319706a06SJames Wright child_coords[1 + i * num_comp_sf] = child_quad_coords[1 + i * num_comp_x]; 16419706a06SJames Wright } 16519706a06SJames Wright for (int i = 0; i < parent_num_qpnts; i++) { 16619706a06SJames Wright parent_coords[0 + i * num_comp_sf] = parent_quad_coords[0 + i * num_comp_x]; 16719706a06SJames Wright parent_coords[1 + i * num_comp_sf] = parent_quad_coords[1 + i * num_comp_x]; 16819706a06SJames Wright } 16919706a06SJames Wright CeedVectorRestoreArrayRead(child_qx_coords, &child_quad_coords); 17019706a06SJames Wright CeedVectorRestoreArrayRead(parent_qx_coords, &parent_quad_coords); 17119706a06SJames Wright } 17219706a06SJames Wright 17319706a06SJames Wright PetscCall(PetscSFSetGraphFromCoordinates(statssf, parent_num_qpnts, child_num_qpnts, num_comp_sf, 1e-12, parent_coords, child_coords)); 17419706a06SJames Wright 175*a175e481SJames Wright PetscCall(PetscSFViewFromOptions(statssf, NULL, "-spanstats_sf_view")); 176*a175e481SJames Wright 17719706a06SJames Wright PetscCall(PetscFree2(child_coords, parent_coords)); 17819706a06SJames Wright CeedVectorDestroy(&child_qx_coords); 17919706a06SJames Wright CeedVectorDestroy(&parent_qx_coords); 18019706a06SJames Wright PetscFunctionReturn(0); 18119706a06SJames Wright } 18219706a06SJames Wright 183*a175e481SJames Wright // Compute mass matrix for statistics projection 184*a175e481SJames Wright PetscErrorCode SetupL2ProjectionStats(Ceed ceed, User user, CeedData ceed_data) { 185*a175e481SJames Wright CeedQFunction qf_mass; 186*a175e481SJames Wright CeedOperator op_mass; 187*a175e481SJames Wright CeedInt num_comp_q, q_data_size; 188*a175e481SJames Wright PetscFunctionBeginUser; 189*a175e481SJames Wright 190*a175e481SJames Wright // CEED Restriction 191*a175e481SJames Wright CeedElemRestrictionGetNumComponents(ceed_data->spanstats.elem_restr_parent_stats, &num_comp_q); 192*a175e481SJames Wright CeedElemRestrictionGetNumComponents(ceed_data->spanstats.elem_restr_parent_qd, &q_data_size); 193*a175e481SJames Wright 194*a175e481SJames Wright // Create Mass CeedOperator 195*a175e481SJames Wright PetscCall(CreateMassQFunction(ceed, num_comp_q, q_data_size, &qf_mass)); 196*a175e481SJames Wright CeedOperatorCreate(ceed, qf_mass, NULL, NULL, &op_mass); 197*a175e481SJames Wright CeedOperatorSetField(op_mass, "q", ceed_data->spanstats.elem_restr_parent_stats, ceed_data->spanstats.basis_stats, CEED_VECTOR_ACTIVE); 198*a175e481SJames Wright CeedOperatorSetField(op_mass, "qdata", ceed_data->spanstats.elem_restr_parent_qd, CEED_BASIS_COLLOCATED, ceed_data->spanstats.q_data); 199*a175e481SJames Wright CeedOperatorSetField(op_mass, "v", ceed_data->spanstats.elem_restr_parent_stats, ceed_data->spanstats.basis_stats, CEED_VECTOR_ACTIVE); 200*a175e481SJames Wright 201*a175e481SJames Wright // Setup KSP for L^2 projection 202*a175e481SJames Wright { 203*a175e481SJames Wright MatopApplyContext M_ctx; 204*a175e481SJames Wright PetscInt l_size, g_size; 205*a175e481SJames Wright Mat mat_mass; 206*a175e481SJames Wright VecType vec_type; 207*a175e481SJames Wright KSP ksp; 208*a175e481SJames Wright Vec ones, M_inv; 209*a175e481SJames Wright CeedVector x_ceed, y_ceed; 210*a175e481SJames Wright 211*a175e481SJames Wright PetscCall(DMCreateGlobalVector(user->spanstats.dm, &M_inv)); 212*a175e481SJames Wright PetscCall(VecGetLocalSize(M_inv, &l_size)); 213*a175e481SJames Wright PetscCall(VecGetSize(M_inv, &g_size)); 214*a175e481SJames Wright PetscCall(VecGetType(M_inv, &vec_type)); 215*a175e481SJames Wright 216*a175e481SJames Wright PetscCall(PetscMalloc1(1, &M_ctx)); 217*a175e481SJames Wright PetscCall(MatCreateShell(PETSC_COMM_WORLD, l_size, l_size, g_size, g_size, M_ctx, &mat_mass)); 218*a175e481SJames Wright PetscCall(MatShellSetOperation(mat_mass, MATOP_MULT, (void (*)(void))MatMult_Ceed)); 219*a175e481SJames Wright PetscCall(MatShellSetOperation(mat_mass, MATOP_GET_DIAGONAL, (void (*)(void))MatGetDiag_Ceed)); 220*a175e481SJames Wright PetscCall(MatShellSetVecType(mat_mass, vec_type)); 221*a175e481SJames Wright 222*a175e481SJames Wright CeedElemRestrictionCreateVector(ceed_data->spanstats.elem_restr_parent_stats, &x_ceed, NULL); 223*a175e481SJames Wright CeedElemRestrictionCreateVector(ceed_data->spanstats.elem_restr_parent_stats, &y_ceed, NULL); 224*a175e481SJames Wright 225*a175e481SJames Wright PetscCall(SetupMatopApplyCtx(PETSC_COMM_WORLD, user->spanstats.dm, user->ceed, op_mass, x_ceed, y_ceed, NULL, M_ctx)); 226*a175e481SJames Wright user->spanstats.M_ctx = M_ctx; 227*a175e481SJames Wright 228*a175e481SJames Wright // Create lumped mass matrix inverse 229*a175e481SJames Wright PetscCall(DMGetGlobalVector(user->spanstats.dm, &ones)); 230*a175e481SJames Wright PetscCall(VecZeroEntries(M_inv)); 231*a175e481SJames Wright PetscCall(VecSet(ones, 1)); 232*a175e481SJames Wright PetscCall(MatMult(mat_mass, ones, M_inv)); 233*a175e481SJames Wright PetscCall(VecReciprocal(M_inv)); 234*a175e481SJames Wright user->spanstats.M_inv = M_inv; 235*a175e481SJames Wright PetscCall(DMRestoreGlobalVector(user->spanstats.dm, &ones)); 236*a175e481SJames Wright 237*a175e481SJames Wright PetscCall(KSPCreate(PETSC_COMM_WORLD, &ksp)); 238*a175e481SJames Wright PetscCall(KSPSetOptionsPrefix(ksp, "spanstats_")); 239*a175e481SJames Wright { 240*a175e481SJames Wright PC pc; 241*a175e481SJames Wright PetscCall(KSPGetPC(ksp, &pc)); 242*a175e481SJames Wright PetscCall(PCSetType(pc, PCJACOBI)); 243*a175e481SJames Wright PetscCall(PCJacobiSetType(pc, PC_JACOBI_DIAGONAL)); 244*a175e481SJames Wright PetscCall(KSPSetType(ksp, KSPCG)); 245*a175e481SJames Wright PetscCall(KSPSetNormType(ksp, KSP_NORM_NATURAL)); 246*a175e481SJames Wright PetscCall(KSPSetTolerances(ksp, 1e-10, PETSC_DEFAULT, PETSC_DEFAULT, PETSC_DEFAULT)); 247*a175e481SJames Wright } 248*a175e481SJames Wright PetscCall(KSPSetOperators(ksp, mat_mass, mat_mass)); 249*a175e481SJames Wright PetscCall(KSPSetFromOptions(ksp)); 250*a175e481SJames Wright user->spanstats.ksp = ksp; 251*a175e481SJames Wright } 252*a175e481SJames Wright 253*a175e481SJames Wright // Cleanup 254*a175e481SJames Wright CeedQFunctionDestroy(&qf_mass); 255*a175e481SJames Wright PetscFunctionReturn(0); 256*a175e481SJames Wright } 257*a175e481SJames Wright 258*a175e481SJames Wright // Create CeedOperators and KSP for the statistics collection and processing 259*a175e481SJames Wright PetscErrorCode CreateStatisticsOperators(Ceed ceed, User user, CeedData ceed_data, ProblemData *problem) { 260*a175e481SJames Wright CeedInt num_comp_stats = user->spanstats.num_comp_stats, num_comp_x = problem->dim, num_comp_q; 261*a175e481SJames Wright CeedOperator op_setup_sur; 262*a175e481SJames Wright PetscFunctionBeginUser; 263*a175e481SJames Wright CeedBasisGetNumComponents(ceed_data->basis_q, &num_comp_q); 264*a175e481SJames Wright 265*a175e481SJames Wright // Create Operator for statistics collection 266*a175e481SJames Wright switch (user->phys->state_var) { 267*a175e481SJames Wright case STATEVAR_PRIMITIVE: 268*a175e481SJames Wright CeedQFunctionCreateInterior(ceed, 1, ChildStatsCollection_Prim, ChildStatsCollection_Prim_loc, &ceed_data->spanstats.qf_stats_collect); 269*a175e481SJames Wright break; 270*a175e481SJames Wright case STATEVAR_CONSERVATIVE: 271*a175e481SJames Wright CeedQFunctionCreateInterior(ceed, 1, ChildStatsCollection_Conserv, ChildStatsCollection_Conserv_loc, &ceed_data->spanstats.qf_stats_collect); 272*a175e481SJames Wright break; 273*a175e481SJames Wright } 274*a175e481SJames Wright 275*a175e481SJames Wright if (user->app_ctx->stats_test) { 276*a175e481SJames Wright CeedQFunctionDestroy(&ceed_data->spanstats.qf_stats_collect); 277*a175e481SJames Wright CeedQFunctionCreateInterior(ceed, 1, ChildStatsCollectionTest, ChildStatsCollectionTest_loc, &ceed_data->spanstats.qf_stats_collect); 278*a175e481SJames Wright } 279*a175e481SJames Wright 280*a175e481SJames Wright CeedQFunctionSetContext(ceed_data->spanstats.qf_stats_collect, problem->apply_vol_ifunction.qfunction_context); 281*a175e481SJames Wright CeedQFunctionAddInput(ceed_data->spanstats.qf_stats_collect, "q", num_comp_q, CEED_EVAL_INTERP); 282*a175e481SJames Wright CeedQFunctionAddInput(ceed_data->spanstats.qf_stats_collect, "q_data", problem->q_data_size_vol, CEED_EVAL_NONE); 283*a175e481SJames Wright CeedQFunctionAddInput(ceed_data->spanstats.qf_stats_collect, "x", num_comp_x, CEED_EVAL_INTERP); 284*a175e481SJames Wright CeedQFunctionAddOutput(ceed_data->spanstats.qf_stats_collect, "v", num_comp_stats, CEED_EVAL_NONE); 285*a175e481SJames Wright 286*a175e481SJames Wright CeedOperatorCreate(ceed, ceed_data->spanstats.qf_stats_collect, NULL, NULL, &user->spanstats.op_stats_collect); 287*a175e481SJames Wright CeedOperatorSetField(user->spanstats.op_stats_collect, "q", ceed_data->elem_restr_q, ceed_data->basis_q, CEED_VECTOR_ACTIVE); 288*a175e481SJames Wright CeedOperatorSetField(user->spanstats.op_stats_collect, "q_data", ceed_data->elem_restr_qd_i, CEED_BASIS_COLLOCATED, ceed_data->q_data); 289*a175e481SJames Wright CeedOperatorSetField(user->spanstats.op_stats_collect, "x", ceed_data->elem_restr_x, ceed_data->basis_x, ceed_data->x_coord); 290*a175e481SJames Wright CeedOperatorSetField(user->spanstats.op_stats_collect, "v", ceed_data->spanstats.elem_restr_child_colloc, CEED_BASIS_COLLOCATED, 291*a175e481SJames Wright CEED_VECTOR_ACTIVE); 292*a175e481SJames Wright 293*a175e481SJames Wright // Create Operator for statistics projection / processing 294*a175e481SJames Wright // Simply take collocated parent data (with quadrature weight already applied) and multiply by weight function. 295*a175e481SJames Wright // Therefore, an Identity QF is sufficient 296*a175e481SJames Wright CeedQFunctionCreateIdentity(ceed, num_comp_stats, CEED_EVAL_NONE, CEED_EVAL_INTERP, &ceed_data->spanstats.qf_stats_proj); 297*a175e481SJames Wright 298*a175e481SJames Wright CeedOperatorCreate(ceed, ceed_data->spanstats.qf_stats_proj, NULL, NULL, &user->spanstats.op_stats_proj); 299*a175e481SJames Wright CeedOperatorSetField(user->spanstats.op_stats_proj, "input", ceed_data->spanstats.elem_restr_parent_colloc, CEED_BASIS_COLLOCATED, 300*a175e481SJames Wright CEED_VECTOR_ACTIVE); 301*a175e481SJames Wright CeedOperatorSetField(user->spanstats.op_stats_proj, "output", ceed_data->spanstats.elem_restr_parent_stats, ceed_data->spanstats.basis_stats, 302*a175e481SJames Wright CEED_VECTOR_ACTIVE); 303*a175e481SJames Wright 304*a175e481SJames Wright // Get q_data for lumped mass matrix formation 305*a175e481SJames Wright CeedOperatorCreate(ceed, ceed_data->qf_setup_sur, NULL, NULL, &op_setup_sur); 306*a175e481SJames Wright CeedOperatorSetField(op_setup_sur, "dx", ceed_data->spanstats.elem_restr_parent_x, ceed_data->spanstats.basis_x, CEED_VECTOR_ACTIVE); 307*a175e481SJames Wright CeedOperatorSetField(op_setup_sur, "weight", CEED_ELEMRESTRICTION_NONE, ceed_data->spanstats.basis_x, CEED_VECTOR_NONE); 308*a175e481SJames Wright CeedOperatorSetField(op_setup_sur, "surface qdata", ceed_data->spanstats.elem_restr_parent_qd, CEED_BASIS_COLLOCATED, CEED_VECTOR_ACTIVE); 309*a175e481SJames Wright CeedOperatorApply(op_setup_sur, ceed_data->spanstats.x_coord, ceed_data->spanstats.q_data, CEED_REQUEST_IMMEDIATE); 310*a175e481SJames Wright 311*a175e481SJames Wright CeedOperatorDestroy(&op_setup_sur); 312*a175e481SJames Wright PetscFunctionReturn(0); 313*a175e481SJames Wright } 314*a175e481SJames Wright 315*a175e481SJames Wright // Setup for statistics collection 31619706a06SJames Wright PetscErrorCode SetupStatsCollection(Ceed ceed, User user, CeedData ceed_data, ProblemData *problem) { 31719706a06SJames Wright DM dm = user->spanstats.dm; 31819706a06SJames Wright MPI_Comm comm = PetscObjectComm((PetscObject)dm); 31919706a06SJames Wright CeedInt dim, P, Q, num_comp_x; 32019706a06SJames Wright Vec X_loc; 32119706a06SJames Wright PetscMemType X_loc_memtype; 32219706a06SJames Wright const PetscScalar *X_loc_array; 32319706a06SJames Wright PetscFunctionBeginUser; 32419706a06SJames Wright 32519706a06SJames Wright PetscCall(DMGetDimension(dm, &dim)); 326*a175e481SJames Wright CeedBasisGetNumQuadraturePoints1D(ceed_data->basis_q, &Q); 327*a175e481SJames Wright CeedBasisGetNumNodes1D(ceed_data->basis_q, &P); 32819706a06SJames Wright 3291737222fSJames Wright PetscCall(GetRestrictionForDomain(ceed, dm, 0, 0, 0, Q, problem->q_data_size_sur, &ceed_data->spanstats.elem_restr_parent_stats, 33019706a06SJames Wright &ceed_data->spanstats.elem_restr_parent_x, &ceed_data->spanstats.elem_restr_parent_qd)); 33119706a06SJames Wright CeedElemRestrictionGetNumComponents(ceed_data->spanstats.elem_restr_parent_x, &num_comp_x); 33219706a06SJames Wright CeedElemRestrictionCreateVector(ceed_data->spanstats.elem_restr_parent_x, &ceed_data->spanstats.x_coord, NULL); 333*a175e481SJames Wright CeedElemRestrictionCreateVector(ceed_data->spanstats.elem_restr_parent_stats, &user->spanstats.rhs_ceed, NULL); 3341737222fSJames Wright CeedElemRestrictionCreateVector(ceed_data->spanstats.elem_restr_parent_qd, &ceed_data->spanstats.q_data, NULL); 33519706a06SJames Wright 336*a175e481SJames Wright CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_x, 2, Q, CEED_GAUSS, &ceed_data->spanstats.basis_x); 33719706a06SJames Wright CeedBasisCreateTensorH1Lagrange(ceed, dim, user->spanstats.num_comp_stats, P, Q, CEED_GAUSS, &ceed_data->spanstats.basis_stats); 33819706a06SJames Wright 3391737222fSJames Wright PetscCall(CreateElemRestrColloc(ceed, user->spanstats.num_comp_stats, ceed_data->spanstats.basis_stats, 3401737222fSJames Wright ceed_data->spanstats.elem_restr_parent_stats, &ceed_data->spanstats.elem_restr_parent_colloc, 3411737222fSJames Wright &user->spanstats.parent_stats, NULL)); 3421737222fSJames Wright PetscCall(CreateElemRestrColloc(ceed, user->spanstats.num_comp_stats, ceed_data->basis_q, ceed_data->elem_restr_q, 3431737222fSJames Wright &ceed_data->spanstats.elem_restr_child_colloc, &user->spanstats.child_stats, NULL)); 344*a175e481SJames Wright CeedElemRestrictionCreateVector(ceed_data->spanstats.elem_restr_child_colloc, &user->spanstats.child_inst_stats, NULL); 345*a175e481SJames Wright CeedVectorSetValue(user->spanstats.child_stats, 0); 3461737222fSJames Wright 34719706a06SJames Wright // -- Copy DM coordinates into CeedVector 34819706a06SJames Wright { 34919706a06SJames Wright DM cdm; 35019706a06SJames Wright PetscCall(DMGetCellCoordinateDM(dm, &cdm)); 35119706a06SJames Wright if (cdm) { 35219706a06SJames Wright PetscCall(DMGetCellCoordinatesLocal(dm, &X_loc)); 35319706a06SJames Wright } else { 35419706a06SJames Wright PetscCall(DMGetCoordinatesLocal(dm, &X_loc)); 35519706a06SJames Wright } 35619706a06SJames Wright } 35719706a06SJames Wright PetscCall(VecScale(X_loc, problem->dm_scale)); 35819706a06SJames Wright PetscCall(VecGetArrayReadAndMemType(X_loc, &X_loc_array, &X_loc_memtype)); 35919706a06SJames Wright CeedVectorSetArray(ceed_data->spanstats.x_coord, MemTypeP2C(X_loc_memtype), CEED_COPY_VALUES, (PetscScalar *)X_loc_array); 36019706a06SJames Wright PetscCall(VecRestoreArrayRead(X_loc, &X_loc_array)); 36119706a06SJames Wright 36219706a06SJames Wright // Create SF for communicating child data back their respective parents 36319706a06SJames Wright PetscCall(PetscSFCreate(comm, &user->spanstats.sf)); 36419706a06SJames Wright PetscCall(CreateStatsSF(ceed, ceed_data, user->dm, user->spanstats.dm, user->spanstats.sf)); 36551ee423eSJames Wright 366*a175e481SJames Wright // Create CeedOperators for statistics collection 367*a175e481SJames Wright PetscCall(CreateStatisticsOperators(ceed, user, ceed_data, problem)); 368*a175e481SJames Wright 369*a175e481SJames Wright // Setup KSP and Mat for L^2 projection of statistics 370*a175e481SJames Wright PetscCall(SetupL2ProjectionStats(ceed, user, ceed_data)); 371*a175e481SJames Wright 372*a175e481SJames Wright PetscFunctionReturn(0); 373*a175e481SJames Wright } 374*a175e481SJames Wright 375*a175e481SJames Wright // Collect statistics based on the solution Q 376*a175e481SJames Wright PetscErrorCode CollectStatistics(User user, PetscScalar solution_time, Vec Q) { 377*a175e481SJames Wright PetscMemType q_mem_type; 378*a175e481SJames Wright const PetscScalar *q_arr; 379*a175e481SJames Wright Vec Q_loc; 380*a175e481SJames Wright PetscFunctionBeginUser; 381*a175e481SJames Wright 382*a175e481SJames Wright PetscCall(DMGetLocalVector(user->dm, &Q_loc)); 383*a175e481SJames Wright PetscCall(VecZeroEntries(Q_loc)); 384*a175e481SJames Wright PetscCall(DMGlobalToLocal(user->dm, Q, INSERT_VALUES, Q_loc)); 385*a175e481SJames Wright 386*a175e481SJames Wright PetscCall(VecGetArrayReadAndMemType(Q_loc, &q_arr, &q_mem_type)); 387*a175e481SJames Wright CeedVectorSetArray(user->q_ceed, MemTypeP2C(q_mem_type), CEED_USE_POINTER, (PetscScalar *)q_arr); 388*a175e481SJames Wright 389*a175e481SJames Wright CeedOperatorApply(user->spanstats.op_stats_collect, user->q_ceed, user->spanstats.child_inst_stats, CEED_REQUEST_IMMEDIATE); 390*a175e481SJames Wright 391*a175e481SJames Wright CeedVectorTakeArray(user->q_ceed, MemTypeP2C(q_mem_type), NULL); 392*a175e481SJames Wright PetscCall(VecRestoreArrayReadAndMemType(Q_loc, &q_arr)); 393*a175e481SJames Wright PetscCall(DMRestoreLocalVector(user->dm, &Q_loc)); 394*a175e481SJames Wright 395*a175e481SJames Wright // Record averaging using left rectangle rule 396*a175e481SJames Wright PetscScalar delta_t = solution_time - user->spanstats.prev_time; 397*a175e481SJames Wright PetscScalar prev_timeinterval = user->spanstats.prev_time - user->app_ctx->cont_time; 398*a175e481SJames Wright CeedVectorScale(user->spanstats.child_stats, prev_timeinterval / (prev_timeinterval + delta_t)); 399*a175e481SJames Wright CeedVectorAXPY(user->spanstats.child_stats, delta_t / (prev_timeinterval + delta_t), user->spanstats.child_inst_stats); 400*a175e481SJames Wright user->spanstats.prev_time = solution_time; 401*a175e481SJames Wright 402*a175e481SJames Wright PetscFunctionReturn(0); 403*a175e481SJames Wright } 404*a175e481SJames Wright 405*a175e481SJames Wright // Process the child statistics into parent statistics and project them onto stats 406*a175e481SJames Wright PetscErrorCode ProcessStatistics(User user, Vec *stats) { 407*a175e481SJames Wright Span_Stats user_stats = user->spanstats; 408*a175e481SJames Wright const PetscScalar *child_stats; 409*a175e481SJames Wright PetscScalar *parent_stats; 410*a175e481SJames Wright MPI_Datatype unit; 411*a175e481SJames Wright Vec rhs_loc, rhs; 412*a175e481SJames Wright PetscMemType rhs_mem_type; 413*a175e481SJames Wright CeedScalar *rhs_arr; 414*a175e481SJames Wright CeedMemType ceed_mem_type; 415*a175e481SJames Wright PetscFunctionBeginUser; 416*a175e481SJames Wright 417*a175e481SJames Wright CeedGetPreferredMemType(user->ceed, &ceed_mem_type); 418*a175e481SJames Wright CeedVectorSetValue(user_stats.parent_stats, 0); 419*a175e481SJames Wright 420*a175e481SJames Wright CeedVectorGetArrayRead(user_stats.child_stats, ceed_mem_type, &child_stats); 421*a175e481SJames Wright CeedVectorGetArray(user_stats.parent_stats, ceed_mem_type, &parent_stats); 422*a175e481SJames Wright 423*a175e481SJames Wright if (user_stats.num_comp_stats == 1) unit = MPIU_REAL; 424*a175e481SJames Wright else { 425*a175e481SJames Wright PetscCallMPI(MPI_Type_contiguous(user_stats.num_comp_stats, MPIU_REAL, &unit)); 426*a175e481SJames Wright PetscCallMPI(MPI_Type_commit(&unit)); 427*a175e481SJames Wright } 428*a175e481SJames Wright 429*a175e481SJames Wright PetscCall(PetscSFReduceBegin(user_stats.sf, unit, child_stats, parent_stats, MPI_SUM)); 430*a175e481SJames Wright PetscCall(PetscSFReduceEnd(user_stats.sf, unit, child_stats, parent_stats, MPI_SUM)); 431*a175e481SJames Wright 432*a175e481SJames Wright CeedVectorRestoreArrayRead(user_stats.child_stats, &child_stats); 433*a175e481SJames Wright CeedVectorRestoreArray(user_stats.parent_stats, &parent_stats); 434*a175e481SJames Wright PetscCallMPI(MPI_Type_free(&unit)); 435*a175e481SJames Wright 436*a175e481SJames Wright CeedVectorScale(user_stats.parent_stats, 1 / user_stats.span_width); 437*a175e481SJames Wright 438*a175e481SJames Wright // L^2 projection with the parent_data 439*a175e481SJames Wright PetscCall(DMGetGlobalVector(user_stats.dm, &rhs)); 440*a175e481SJames Wright PetscCall(DMGetLocalVector(user_stats.dm, &rhs_loc)); 441*a175e481SJames Wright PetscCall(VecZeroEntries(rhs)); 442*a175e481SJames Wright PetscCall(VecZeroEntries(rhs_loc)); 443*a175e481SJames Wright PetscCall(VecGetArrayWriteAndMemType(rhs_loc, &rhs_arr, &rhs_mem_type)); 444*a175e481SJames Wright CeedVectorSetArray(user_stats.rhs_ceed, MemTypeP2C(rhs_mem_type), CEED_USE_POINTER, (PetscScalar *)rhs_arr); 445*a175e481SJames Wright 446*a175e481SJames Wright CeedOperatorApply(user_stats.op_stats_proj, user_stats.parent_stats, user_stats.rhs_ceed, CEED_REQUEST_IMMEDIATE); 447*a175e481SJames Wright 448*a175e481SJames Wright CeedVectorTakeArray(user_stats.rhs_ceed, MemTypeP2C(rhs_mem_type), &rhs_arr); 449*a175e481SJames Wright PetscCall(VecRestoreArrayAndMemType(rhs_loc, &rhs_arr)); 450*a175e481SJames Wright PetscCall(DMLocalToGlobal(user_stats.dm, rhs_loc, ADD_VALUES, rhs)); 451*a175e481SJames Wright 452*a175e481SJames Wright PetscCall(VecDuplicate(rhs, stats)); 453*a175e481SJames Wright PetscCall(VecPointwiseMult(*stats, rhs, user_stats.M_inv)); 454*a175e481SJames Wright 455*a175e481SJames Wright PetscCall(KSPSolve(user_stats.ksp, rhs, *stats)); 456*a175e481SJames Wright 457*a175e481SJames Wright PetscFunctionReturn(0); 458*a175e481SJames Wright } 459*a175e481SJames Wright 460*a175e481SJames Wright // TSMonitor for the statistics collection and processing 461*a175e481SJames Wright PetscErrorCode TSMonitor_Statistics(TS ts, PetscInt steps, PetscReal solution_time, Vec Q, void *ctx) { 462*a175e481SJames Wright User user = (User)ctx; 463*a175e481SJames Wright Vec stats; 464*a175e481SJames Wright PetscFunctionBeginUser; 465*a175e481SJames Wright 466*a175e481SJames Wright // Do not collect or process on the first step of the run (ie. on the initial condition) 467*a175e481SJames Wright if (steps == user->app_ctx->cont_steps) PetscFunctionReturn(0); 468*a175e481SJames Wright 469*a175e481SJames Wright if (steps % user->app_ctx->stats_collect_interval == 0) { 470*a175e481SJames Wright PetscCall(CollectStatistics(user, solution_time, Q)); 471*a175e481SJames Wright } 472*a175e481SJames Wright 473*a175e481SJames Wright if (steps % user->app_ctx->stats_write_interval == 0 && user->app_ctx->stats_write_interval != -1) { 474*a175e481SJames Wright PetscCall(DMGetGlobalVector(user->spanstats.dm, &stats)); 475*a175e481SJames Wright PetscCall(ProcessStatistics(user, &stats)); 476*a175e481SJames Wright PetscCall(VecViewFromOptions(stats, NULL, "-stats_write_view")); 477*a175e481SJames Wright PetscCall(DMRestoreGlobalVector(user->spanstats.dm, &stats)); 478*a175e481SJames Wright } 479*a175e481SJames Wright PetscFunctionReturn(0); 480*a175e481SJames Wright } 481*a175e481SJames Wright 482*a175e481SJames Wright // Function to be called at the end of a simulation 483*a175e481SJames Wright PetscErrorCode StatsCollectFinalCall(User user, PetscReal solution_time, Vec Q) { 484*a175e481SJames Wright Vec stats; 485*a175e481SJames Wright PetscFunctionBeginUser; 486*a175e481SJames Wright 487*a175e481SJames Wright PetscCall(CollectStatistics(user, solution_time, Q)); 488*a175e481SJames Wright 489*a175e481SJames Wright PetscCall(DMGetGlobalVector(user->spanstats.dm, &stats)); 490*a175e481SJames Wright PetscCall(ProcessStatistics(user, &stats)); 491*a175e481SJames Wright PetscCall(VecViewFromOptions(stats, NULL, "-stats_write_view")); 492*a175e481SJames Wright 493*a175e481SJames Wright PetscScalar *stats_arr; 494*a175e481SJames Wright PetscCall(VecGetArray(stats, &stats_arr)); 495*a175e481SJames Wright PetscCall(VecRestoreArray(stats, &stats_arr)); 496*a175e481SJames Wright PetscCall(DMRestoreGlobalVector(user->spanstats.dm, &stats)); 497*a175e481SJames Wright 49851ee423eSJames Wright PetscFunctionReturn(0); 49951ee423eSJames Wright } 500