1 // Copyright (c) 2017-2023, Lawrence Livermore National Security, LLC and other CEED contributors. 2 // All Rights Reserved. See the top-level LICENSE and NOTICE files for details. 3 // 4 // SPDX-License-Identifier: BSD-2-Clause 5 // 6 // This file is part of CEED: http://github.com/ceed 7 /// @file 8 /// Functions for setting up and projecting the velocity gradient 9 10 #include "../qfunctions/velocity_gradient_projection.h" 11 12 #include <petscdmplex.h> 13 14 #include "../navierstokes.h" 15 16 PetscErrorCode VelocityGradientProjectionCreateDM(NodalProjectionData grad_velo_proj, User user, PetscInt degree) { 17 PetscFE fe; 18 PetscSection section; 19 PetscInt dim; 20 21 PetscFunctionBeginUser; 22 grad_velo_proj->num_comp = 9; // 9 velocity gradient 23 24 PetscCall(DMClone(user->dm, &grad_velo_proj->dm)); 25 PetscCall(DMGetDimension(grad_velo_proj->dm, &dim)); 26 PetscCall(PetscObjectSetName((PetscObject)grad_velo_proj->dm, "Velocity Gradient Projection")); 27 28 PetscInt q_order = user->app_ctx->degree + user->app_ctx->q_extra; 29 PetscCall(PetscFECreateLagrange(PETSC_COMM_SELF, dim, grad_velo_proj->num_comp, PETSC_FALSE, degree, q_order, &fe)); 30 PetscCall(PetscObjectSetName((PetscObject)fe, "Velocity Gradient Projection")); 31 PetscCall(DMAddField(grad_velo_proj->dm, NULL, (PetscObject)fe)); 32 PetscCall(DMCreateDS(grad_velo_proj->dm)); 33 PetscCall(DMPlexSetClosurePermutationTensor(grad_velo_proj->dm, PETSC_DETERMINE, NULL)); 34 35 PetscCall(DMGetLocalSection(grad_velo_proj->dm, §ion)); 36 PetscCall(PetscSectionSetFieldName(section, 0, "")); 37 PetscCall(PetscSectionSetComponentName(section, 0, 0, "VelocityGradientXX")); 38 PetscCall(PetscSectionSetComponentName(section, 0, 1, "VelocityGradientXY")); 39 PetscCall(PetscSectionSetComponentName(section, 0, 2, "VelocityGradientXZ")); 40 PetscCall(PetscSectionSetComponentName(section, 0, 3, "VelocityGradientYX")); 41 PetscCall(PetscSectionSetComponentName(section, 0, 4, "VelocityGradientYY")); 42 PetscCall(PetscSectionSetComponentName(section, 0, 5, "VelocityGradientYZ")); 43 PetscCall(PetscSectionSetComponentName(section, 0, 6, "VelocityGradientZX")); 44 PetscCall(PetscSectionSetComponentName(section, 0, 7, "VelocityGradientZY")); 45 PetscCall(PetscSectionSetComponentName(section, 0, 8, "VelocityGradientZZ")); 46 47 PetscCall(PetscFEDestroy(&fe)); 48 PetscFunctionReturn(PETSC_SUCCESS); 49 }; 50 51 PetscErrorCode VelocityGradientProjectionSetup(Ceed ceed, User user, CeedData ceed_data, ProblemData *problem) { 52 OperatorApplyContext mass_matop_ctx; 53 CeedOperator op_rhs_assemble, op_mass; 54 CeedQFunction qf_rhs_assemble, qf_mass; 55 CeedBasis basis_grad_velo; 56 CeedElemRestriction elem_restr_grad_velo; 57 PetscInt dim; 58 CeedInt num_comp_x, num_comp_q, q_data_size; 59 60 PetscFunctionBeginUser; 61 PetscCall(PetscNew(&user->grad_velo_proj)); 62 NodalProjectionData grad_velo_proj = user->grad_velo_proj; 63 64 PetscCall(VelocityGradientProjectionCreateDM(grad_velo_proj, user, user->app_ctx->degree)); 65 66 // -- Get Pre-requisite things 67 PetscCall(DMGetDimension(grad_velo_proj->dm, &dim)); 68 PetscCallCeed(ceed, CeedBasisGetNumComponents(ceed_data->basis_x, &num_comp_x)); 69 PetscCallCeed(ceed, CeedBasisGetNumComponents(ceed_data->basis_q, &num_comp_q)); 70 PetscCallCeed(ceed, CeedElemRestrictionGetNumComponents(ceed_data->elem_restr_qd_i, &q_data_size)); 71 PetscCall(GetRestrictionForDomain(ceed, grad_velo_proj->dm, 0, 0, 0, 0, -1, 0, &elem_restr_grad_velo, NULL, NULL)); 72 73 PetscCall(CreateBasisFromPlex(ceed, grad_velo_proj->dm, 0, 0, 0, 0, &basis_grad_velo)); 74 75 // -- Build RHS operator 76 switch (user->phys->state_var) { 77 case STATEVAR_PRIMITIVE: 78 PetscCallCeed( 79 ceed, CeedQFunctionCreateInterior(ceed, 1, VelocityGradientProjectionRHS_Prim, VelocityGradientProjectionRHS_Prim_loc, &qf_rhs_assemble)); 80 break; 81 case STATEVAR_CONSERVATIVE: 82 PetscCallCeed(ceed, CeedQFunctionCreateInterior(ceed, 1, VelocityGradientProjectionRHS_Conserv, VelocityGradientProjectionRHS_Conserv_loc, 83 &qf_rhs_assemble)); 84 break; 85 default: 86 SETERRQ(PetscObjectComm((PetscObject)user->dm), PETSC_ERR_SUP, "No velocity gradient projection QFunction for chosen state variable"); 87 } 88 89 PetscCallCeed(ceed, CeedQFunctionSetContext(qf_rhs_assemble, problem->apply_vol_ifunction.qfunction_context)); 90 PetscCallCeed(ceed, CeedQFunctionAddInput(qf_rhs_assemble, "q", num_comp_q, CEED_EVAL_INTERP)); 91 PetscCallCeed(ceed, CeedQFunctionAddInput(qf_rhs_assemble, "Grad_q", num_comp_q * dim, CEED_EVAL_GRAD)); 92 PetscCallCeed(ceed, CeedQFunctionAddInput(qf_rhs_assemble, "qdata", q_data_size, CEED_EVAL_NONE)); 93 PetscCallCeed(ceed, CeedQFunctionAddInput(qf_rhs_assemble, "x", num_comp_x, CEED_EVAL_INTERP)); 94 PetscCallCeed(ceed, CeedQFunctionAddOutput(qf_rhs_assemble, "velocity gradient", grad_velo_proj->num_comp, CEED_EVAL_INTERP)); 95 96 PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_rhs_assemble, NULL, NULL, &op_rhs_assemble)); 97 PetscCallCeed(ceed, CeedOperatorSetField(op_rhs_assemble, "q", ceed_data->elem_restr_q, ceed_data->basis_q, CEED_VECTOR_ACTIVE)); 98 PetscCallCeed(ceed, CeedOperatorSetField(op_rhs_assemble, "Grad_q", ceed_data->elem_restr_q, ceed_data->basis_q, CEED_VECTOR_ACTIVE)); 99 PetscCallCeed(ceed, CeedOperatorSetField(op_rhs_assemble, "qdata", ceed_data->elem_restr_qd_i, CEED_BASIS_COLLOCATED, ceed_data->q_data)); 100 PetscCallCeed(ceed, CeedOperatorSetField(op_rhs_assemble, "x", ceed_data->elem_restr_x, ceed_data->basis_x, ceed_data->x_coord)); 101 PetscCallCeed(ceed, CeedOperatorSetField(op_rhs_assemble, "velocity gradient", elem_restr_grad_velo, basis_grad_velo, CEED_VECTOR_ACTIVE)); 102 103 PetscCall(OperatorApplyContextCreate(user->dm, grad_velo_proj->dm, ceed, op_rhs_assemble, NULL, NULL, NULL, NULL, &grad_velo_proj->l2_rhs_ctx)); 104 105 // -- Build Mass operator 106 PetscCall(CreateMassQFunction(ceed, grad_velo_proj->num_comp, q_data_size, &qf_mass)); 107 PetscCallCeed(ceed, CeedOperatorCreate(ceed, qf_mass, NULL, NULL, &op_mass)); 108 PetscCallCeed(ceed, CeedOperatorSetField(op_mass, "u", elem_restr_grad_velo, basis_grad_velo, CEED_VECTOR_ACTIVE)); 109 PetscCallCeed(ceed, CeedOperatorSetField(op_mass, "qdata", ceed_data->elem_restr_qd_i, CEED_BASIS_COLLOCATED, ceed_data->q_data)); 110 PetscCallCeed(ceed, CeedOperatorSetField(op_mass, "v", elem_restr_grad_velo, basis_grad_velo, CEED_VECTOR_ACTIVE)); 111 112 { // -- Setup KSP for L^2 projection with lumped mass operator 113 Mat mat_mass; 114 MPI_Comm comm = PetscObjectComm((PetscObject)grad_velo_proj->dm); 115 116 PetscCall(OperatorApplyContextCreate(grad_velo_proj->dm, grad_velo_proj->dm, ceed, op_mass, NULL, NULL, NULL, NULL, &mass_matop_ctx)); 117 PetscCall(CreateMatShell_Ceed(mass_matop_ctx, &mat_mass)); 118 119 PetscCall(KSPCreate(comm, &grad_velo_proj->ksp)); 120 PetscCall(KSPSetOptionsPrefix(grad_velo_proj->ksp, "velocity_gradient_projection_")); 121 { 122 PC pc; 123 PetscCall(KSPGetPC(grad_velo_proj->ksp, &pc)); 124 PetscCall(PCSetType(pc, PCJACOBI)); 125 PetscCall(PCJacobiSetType(pc, PC_JACOBI_ROWSUM)); 126 PetscCall(KSPSetType(grad_velo_proj->ksp, KSPPREONLY)); 127 // TODO Not sure if the option below are necessary 128 PetscCall(KSPSetConvergenceTest(grad_velo_proj->ksp, KSPConvergedSkip, NULL, NULL)); 129 } 130 PetscCall(KSPSetOperators(grad_velo_proj->ksp, mat_mass, mat_mass)); 131 PetscCall(KSPSetFromOptions(grad_velo_proj->ksp)); 132 } 133 134 PetscCallCeed(ceed, CeedBasisDestroy(&basis_grad_velo)); 135 PetscCallCeed(ceed, CeedElemRestrictionDestroy(&elem_restr_grad_velo)); 136 PetscCallCeed(ceed, CeedQFunctionDestroy(&qf_rhs_assemble)); 137 PetscCallCeed(ceed, CeedQFunctionDestroy(&qf_mass)); 138 PetscCallCeed(ceed, CeedOperatorDestroy(&op_rhs_assemble)); 139 PetscCallCeed(ceed, CeedOperatorDestroy(&op_mass)); 140 PetscFunctionReturn(PETSC_SUCCESS); 141 } 142 143 PetscErrorCode VelocityGradientProjectionApply(User user, Vec Q_loc, Vec VelocityGradient) { 144 NodalProjectionData grad_velo_proj = user->grad_velo_proj; 145 OperatorApplyContext l2_rhs_ctx = grad_velo_proj->l2_rhs_ctx; 146 147 PetscFunctionBeginUser; 148 PetscCall(ApplyCeedOperatorLocalToGlobal(Q_loc, VelocityGradient, l2_rhs_ctx)); 149 150 PetscCall(KSPSolve(grad_velo_proj->ksp, VelocityGradient, VelocityGradient)); 151 152 PetscFunctionReturn(PETSC_SUCCESS); 153 } 154