13d8e8822SJeremy L Thompson // Copyright (c) 2017-2022, Lawrence Livermore National Security, LLC and other CEED contributors. 23d8e8822SJeremy L Thompson // All Rights Reserved. See the top-level LICENSE and NOTICE files for details. 3cb32e2e7SValeria Barra // 43d8e8822SJeremy L Thompson // SPDX-License-Identifier: BSD-2-Clause 5cb32e2e7SValeria Barra // 63d8e8822SJeremy L Thompson // This file is part of CEED: http://github.com/ceed 7cb32e2e7SValeria Barra 8cb32e2e7SValeria Barra /// @file 9cb32e2e7SValeria Barra /// libCEED QFunctions for diffusion operator example using PETSc 10cb32e2e7SValeria Barra 1113921685Svaleriabarra #ifndef bp3_h 1213921685Svaleriabarra #define bp3_h 1313921685Svaleriabarra 14c9c2c079SJeremy L Thompson #include <ceed.h> 1513921685Svaleriabarra #include <math.h> 1613921685Svaleriabarra 17e83e87a5Sjeremylt // ----------------------------------------------------------------------------- 18*ea61e9acSJeremy L Thompson // This QFunction sets up the geometric factors required to apply the diffusion operator 19ed264d09SValeria Barra // 20*ea61e9acSJeremy L Thompson // We require the product of the inverse of the Jacobian and its transpose to properly compute integrals of the form: int( gradv gradu) 21ed264d09SValeria Barra // 22ed264d09SValeria Barra // Determinant of Jacobian: 23ed264d09SValeria Barra // detJ = J11*A11 + J21*A12 + J31*A13 24ed264d09SValeria Barra // Jij = Jacobian entry ij 25ed264d09SValeria Barra // Aij = Adjoint ij 26ed264d09SValeria Barra // 27ed264d09SValeria Barra // Inverse of Jacobian: 28ed264d09SValeria Barra // Bij = Aij / detJ 29ed264d09SValeria Barra // 30ed264d09SValeria Barra // Product of Inverse and Transpose: 31ed264d09SValeria Barra // BBij = sum( Bik Bkj ) 32ed264d09SValeria Barra // 33ed264d09SValeria Barra // Stored: w B^T B detJ = w A^T A / detJ 34ed264d09SValeria Barra // Note: This matrix is symmetric, so we only store 6 distinct entries 350a8fc04aSrezgarshakeri // qd: 1 4 7 36ed264d09SValeria Barra // 2 5 8 370a8fc04aSrezgarshakeri // 3 6 9 38cb32e2e7SValeria Barra // ----------------------------------------------------------------------------- 392b730f8bSJeremy L Thompson CEED_QFUNCTION(SetupDiffGeo)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 40d4d45553Srezgarshakeri // Inputs 41d4d45553Srezgarshakeri const CeedScalar(*J)[3][CEED_Q_VLA] = (const CeedScalar(*)[3][CEED_Q_VLA])in[1]; 42d4d45553Srezgarshakeri const CeedScalar(*w) = in[2]; // Note: *X = in[0] 43d4d45553Srezgarshakeri // Outputs 44d4d45553Srezgarshakeri CeedScalar(*qd) = out[0]; 45cb32e2e7SValeria Barra 46d4d45553Srezgarshakeri const CeedInt dim = 3; 47cb32e2e7SValeria Barra // Quadrature Point Loop 482b730f8bSJeremy L Thompson CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) { 49d4d45553Srezgarshakeri // Setup 50d4d45553Srezgarshakeri CeedScalar A[3][3]; 51d4d45553Srezgarshakeri for (CeedInt j = 0; j < dim; j++) { 52d4d45553Srezgarshakeri for (CeedInt k = 0; k < dim; k++) { 53d4d45553Srezgarshakeri // Equivalent code with no mod operations: 54d4d45553Srezgarshakeri // A[k][j] = J[k+1][j+1]*J[k+2][j+2] - J[k+1][j+2]*J[k+2][j+1] 55d4d45553Srezgarshakeri A[k][j] = J[(k + 1) % dim][(j + 1) % dim][i] * J[(k + 2) % dim][(j + 2) % dim][i] - 56d4d45553Srezgarshakeri J[(k + 1) % dim][(j + 2) % dim][i] * J[(k + 2) % dim][(j + 1) % dim][i]; 57d4d45553Srezgarshakeri } 58d4d45553Srezgarshakeri } 59d4d45553Srezgarshakeri const CeedScalar detJ = J[0][0][i] * A[0][0] + J[0][1][i] * A[0][1] + J[0][2][i] * A[0][2]; 60d4d45553Srezgarshakeri 61d4d45553Srezgarshakeri const CeedScalar qw = w[i] / detJ; 620a8fc04aSrezgarshakeri qd[i + Q * 0] = w[i] * detJ; 630a8fc04aSrezgarshakeri qd[i + Q * 1] = qw * (A[0][0] * A[0][0] + A[0][1] * A[0][1] + A[0][2] * A[0][2]); 640a8fc04aSrezgarshakeri qd[i + Q * 2] = qw * (A[0][0] * A[1][0] + A[0][1] * A[1][1] + A[0][2] * A[1][2]); 650a8fc04aSrezgarshakeri qd[i + Q * 3] = qw * (A[0][0] * A[2][0] + A[0][1] * A[2][1] + A[0][2] * A[2][2]); 660a8fc04aSrezgarshakeri qd[i + Q * 4] = qw * (A[1][0] * A[1][0] + A[1][1] * A[1][1] + A[1][2] * A[1][2]); 670a8fc04aSrezgarshakeri qd[i + Q * 5] = qw * (A[1][0] * A[2][0] + A[1][1] * A[2][1] + A[1][2] * A[2][2]); 680a8fc04aSrezgarshakeri qd[i + Q * 6] = qw * (A[2][0] * A[2][0] + A[2][1] * A[2][1] + A[2][2] * A[2][2]); 69cb32e2e7SValeria Barra } // End of Quadrature Point Loop 70cb32e2e7SValeria Barra 71cb32e2e7SValeria Barra return 0; 72cb32e2e7SValeria Barra } 73cb32e2e7SValeria Barra 74e83e87a5Sjeremylt // ----------------------------------------------------------------------------- 75ed264d09SValeria Barra // This QFunction sets up the rhs and true solution for the problem 76cb32e2e7SValeria Barra // ----------------------------------------------------------------------------- 772b730f8bSJeremy L Thompson CEED_QFUNCTION(SetupDiffRhs)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 78cb32e2e7SValeria Barra #ifndef M_PI 79cb32e2e7SValeria Barra #define M_PI 3.14159265358979323846 80cb32e2e7SValeria Barra #endif 81e83e87a5Sjeremylt const CeedScalar *x = in[0], *w = in[1]; 82cb32e2e7SValeria Barra CeedScalar *true_soln = out[0], *rhs = out[1]; 83cb32e2e7SValeria Barra 84cb32e2e7SValeria Barra // Quadrature Point Loop 852b730f8bSJeremy L Thompson CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) { 86cb32e2e7SValeria Barra const CeedScalar c[3] = {0, 1., 2.}; 87cb32e2e7SValeria Barra const CeedScalar k[3] = {1., 2., 3.}; 88cb32e2e7SValeria Barra 892b730f8bSJeremy L Thompson true_soln[i] = sin(M_PI * (c[0] + k[0] * x[i + Q * 0])) * sin(M_PI * (c[1] + k[1] * x[i + Q * 1])) * sin(M_PI * (c[2] + k[2] * x[i + Q * 2])); 90cb32e2e7SValeria Barra 912b730f8bSJeremy L Thompson rhs[i] = w[i + Q * 0] * M_PI * M_PI * (k[0] * k[0] + k[1] * k[1] + k[2] * k[2]) * true_soln[i]; 92cb32e2e7SValeria Barra } // End of Quadrature Point Loop 93cb32e2e7SValeria Barra 94cb32e2e7SValeria Barra return 0; 95cb32e2e7SValeria Barra } 96cb32e2e7SValeria Barra 97e83e87a5Sjeremylt // ----------------------------------------------------------------------------- 98ed264d09SValeria Barra // This QFunction applies the diffusion operator for a scalar field. 99ed264d09SValeria Barra // 100ed264d09SValeria Barra // Inputs: 101ed264d09SValeria Barra // ug - Input vector gradient at quadrature points 1029b072555Sjeremylt // q_data - Geometric factors 103ed264d09SValeria Barra // 104ed264d09SValeria Barra // Output: 105ed264d09SValeria Barra // vg - Output vector (test functions) gradient at quadrature points 106cb32e2e7SValeria Barra // ----------------------------------------------------------------------------- 1072b730f8bSJeremy L Thompson CEED_QFUNCTION(Diff)(void *ctx, CeedInt Q, const CeedScalar *const *in, CeedScalar *const *out) { 1089b072555Sjeremylt const CeedScalar *ug = in[0], *q_data = in[1]; 109cb32e2e7SValeria Barra CeedScalar *vg = out[0]; 110cb32e2e7SValeria Barra 111cb32e2e7SValeria Barra // Quadrature Point Loop 1122b730f8bSJeremy L Thompson CeedPragmaSIMD for (CeedInt i = 0; i < Q; i++) { 113cb32e2e7SValeria Barra // Read spatial derivatives of u 1142b730f8bSJeremy L Thompson const CeedScalar du[3] = {ug[i + Q * 0], ug[i + Q * 1], ug[i + Q * 2]}; 1159b072555Sjeremylt // Read q_data (dXdxdXdx_T symmetric matrix) 1162b730f8bSJeremy L Thompson const CeedScalar dXdxdXdx_T[3][3] = { 1172b730f8bSJeremy L Thompson {q_data[i + 1 * Q], q_data[i + 2 * Q], q_data[i + 3 * Q]}, 1182b730f8bSJeremy L Thompson {q_data[i + 2 * Q], q_data[i + 4 * Q], q_data[i + 5 * Q]}, 1192b730f8bSJeremy L Thompson {q_data[i + 3 * Q], q_data[i + 5 * Q], q_data[i + 6 * Q]} 120cb32e2e7SValeria Barra }; 121cb32e2e7SValeria Barra 1222b730f8bSJeremy L Thompson for (int j = 0; j < 3; j++) { // j = direction of vg 1232b730f8bSJeremy L Thompson vg[i + j * Q] = (du[0] * dXdxdXdx_T[0][j] + du[1] * dXdxdXdx_T[1][j] + du[2] * dXdxdXdx_T[2][j]); 1242b730f8bSJeremy L Thompson } 125cb32e2e7SValeria Barra } // End of Quadrature Point Loop 126cb32e2e7SValeria Barra return 0; 127cb32e2e7SValeria Barra } 128cb32e2e7SValeria Barra // ----------------------------------------------------------------------------- 129f6b55d2cSvaleriabarra 130f6b55d2cSvaleriabarra #endif // bp3_h 131