xref: /libCEED/examples/solids/src/setup-libceed.c (revision 4d00b080eb3f95d2e04e55c0ff369c5c847bb288)
15aed82e4SJeremy L Thompson // Copyright (c) 2017-2024, Lawrence Livermore National Security, LLC and other CEED contributors.
23d8e8822SJeremy L Thompson // All Rights Reserved. See the top-level LICENSE and NOTICE files for details.
33d8e8822SJeremy L Thompson //
43d8e8822SJeremy L Thompson // SPDX-License-Identifier: BSD-2-Clause
53d8e8822SJeremy L Thompson //
63d8e8822SJeremy L Thompson // This file is part of CEED:  http://github.com/ceed
73d8e8822SJeremy L Thompson 
85754ecacSJeremy L Thompson /// @file
95754ecacSJeremy L Thompson /// libCEED setup for solid mechanics example using PETSc
105754ecacSJeremy L Thompson 
115754ecacSJeremy L Thompson #include "../include/setup-libceed.h"
122b730f8bSJeremy L Thompson 
1349aac155SJeremy L Thompson #include <ceed.h>
1449aac155SJeremy L Thompson #include <petscdmplex.h>
1549aac155SJeremy L Thompson #include <petscmat.h>
1649aac155SJeremy L Thompson 
175754ecacSJeremy L Thompson #include "../include/structs.h"
185754ecacSJeremy L Thompson #include "../include/utils.h"
195754ecacSJeremy L Thompson #include "../qfunctions/constant-force.h"      // Constant forcing function
205754ecacSJeremy L Thompson #include "../qfunctions/manufactured-force.h"  // Manufactured solution forcing
212b730f8bSJeremy L Thompson #include "../qfunctions/traction-boundary.h"   // Traction boundaries
225754ecacSJeremy L Thompson 
235754ecacSJeremy L Thompson #if PETSC_VERSION_LT(3, 14, 0)
245754ecacSJeremy L Thompson #define DMPlexGetClosureIndices(a, b, c, d, e, f, g, h, i) DMPlexGetClosureIndices(a, b, c, d, f, g, i)
255754ecacSJeremy L Thompson #define DMPlexRestoreClosureIndices(a, b, c, d, e, f, g, h, i) DMPlexRestoreClosureIndices(a, b, c, d, f, g, i)
265754ecacSJeremy L Thompson #endif
275754ecacSJeremy L Thompson 
285754ecacSJeremy L Thompson // -----------------------------------------------------------------------------
295754ecacSJeremy L Thompson // Problem options
305754ecacSJeremy L Thompson // -----------------------------------------------------------------------------
315754ecacSJeremy L Thompson // Forcing function data
325754ecacSJeremy L Thompson forcingData forcing_options[3] = {
332b730f8bSJeremy L Thompson     [FORCE_NONE]  = {.setup_forcing = NULL,               .setup_forcing_loc = NULL                  },
342b730f8bSJeremy L Thompson     [FORCE_CONST] = {.setup_forcing = SetupConstantForce, .setup_forcing_loc = SetupConstantForce_loc},
352b730f8bSJeremy L Thompson     [FORCE_MMS]   = {.setup_forcing = SetupMMSForce,      .setup_forcing_loc = SetupMMSForce_loc     }
365754ecacSJeremy L Thompson };
375754ecacSJeremy L Thompson 
385754ecacSJeremy L Thompson // -----------------------------------------------------------------------------
395754ecacSJeremy L Thompson // libCEED Functions
405754ecacSJeremy L Thompson // -----------------------------------------------------------------------------
415754ecacSJeremy L Thompson // Destroy libCEED objects
425754ecacSJeremy L Thompson PetscErrorCode CeedDataDestroy(CeedInt level, CeedData data) {
435754ecacSJeremy L Thompson   PetscFunctionBegin;
445754ecacSJeremy L Thompson 
455754ecacSJeremy L Thompson   // Vectors
465754ecacSJeremy L Thompson   CeedVectorDestroy(&data->x_ceed);
475754ecacSJeremy L Thompson   CeedVectorDestroy(&data->y_ceed);
485754ecacSJeremy L Thompson   CeedVectorDestroy(&data->geo_data);
492b730f8bSJeremy L Thompson   for (CeedInt i = 0; i < SOLIDS_MAX_NUMBER_FIELDS; i++) CeedVectorDestroy(&data->stored_fields[i]);
505754ecacSJeremy L Thompson   CeedVectorDestroy(&data->geo_data_diagnostic);
515754ecacSJeremy L Thompson   CeedVectorDestroy(&data->true_soln);
525754ecacSJeremy L Thompson   // Restrictions
535754ecacSJeremy L Thompson   CeedElemRestrictionDestroy(&data->elem_restr_x);
545754ecacSJeremy L Thompson   CeedElemRestrictionDestroy(&data->elem_restr_u);
555754ecacSJeremy L Thompson   CeedElemRestrictionDestroy(&data->elem_restr_geo_data_i);
562b730f8bSJeremy L Thompson   for (CeedInt i = 0; i < SOLIDS_MAX_NUMBER_FIELDS; i++) CeedElemRestrictionDestroy(&data->elem_restr_stored_fields_i[i]);
575754ecacSJeremy L Thompson   CeedElemRestrictionDestroy(&data->elem_restr_energy);
585754ecacSJeremy L Thompson   CeedElemRestrictionDestroy(&data->elem_restr_diagnostic);
595754ecacSJeremy L Thompson   CeedElemRestrictionDestroy(&data->elem_restr_geo_data_diagnostic_i);
605754ecacSJeremy L Thompson   // Bases
615754ecacSJeremy L Thompson   CeedBasisDestroy(&data->basis_x);
625754ecacSJeremy L Thompson   CeedBasisDestroy(&data->basis_u);
635754ecacSJeremy L Thompson   CeedBasisDestroy(&data->basis_energy);
645754ecacSJeremy L Thompson   CeedBasisDestroy(&data->basis_diagnostic);
655754ecacSJeremy L Thompson   // QFunctions
665754ecacSJeremy L Thompson   CeedQFunctionDestroy(&data->qf_residual);
675754ecacSJeremy L Thompson   CeedQFunctionDestroy(&data->qf_jacobian);
685754ecacSJeremy L Thompson   CeedQFunctionDestroy(&data->qf_energy);
695754ecacSJeremy L Thompson   CeedQFunctionDestroy(&data->qf_diagnostic);
705754ecacSJeremy L Thompson   // Operators
715754ecacSJeremy L Thompson   CeedOperatorDestroy(&data->op_residual);
725754ecacSJeremy L Thompson   CeedOperatorDestroy(&data->op_jacobian);
735754ecacSJeremy L Thompson   CeedOperatorDestroy(&data->op_energy);
745754ecacSJeremy L Thompson   CeedOperatorDestroy(&data->op_diagnostic);
755754ecacSJeremy L Thompson   // Restriction and Prolongation data
765754ecacSJeremy L Thompson   CeedBasisDestroy(&data->basis_c_to_f);
775754ecacSJeremy L Thompson   CeedOperatorDestroy(&data->op_prolong);
785754ecacSJeremy L Thompson   CeedOperatorDestroy(&data->op_restrict);
795754ecacSJeremy L Thompson 
802b730f8bSJeremy L Thompson   PetscCall(PetscFree(data));
815754ecacSJeremy L Thompson 
82ee4ca9cbSJames Wright   PetscFunctionReturn(PETSC_SUCCESS);
835754ecacSJeremy L Thompson };
845754ecacSJeremy L Thompson 
855754ecacSJeremy L Thompson // Utility function to create local CEED restriction from DMPlex
862b730f8bSJeremy L Thompson PetscErrorCode CreateRestrictionFromPlex(Ceed ceed, DM dm, CeedInt height, DMLabel domain_label, CeedInt value, CeedElemRestriction *elem_restr) {
87*4d00b080SJeremy L Thompson   PetscInt num_elem, elem_size, num_dof, num_comp, *elem_restr_offsets_petsc;
88*4d00b080SJeremy L Thompson   CeedInt *elem_restr_offsets_ceed;
895754ecacSJeremy L Thompson 
905754ecacSJeremy L Thompson   PetscFunctionBeginUser;
91*4d00b080SJeremy L Thompson   PetscCall(DMPlexGetLocalOffsets(dm, domain_label, value, height, 0, &num_elem, &elem_size, &num_comp, &num_dof, &elem_restr_offsets_petsc));
925754ecacSJeremy L Thompson 
93*4d00b080SJeremy L Thompson   PetscCall(IntArrayPetscToCeed(num_elem * elem_size, &elem_restr_offsets_petsc, &elem_restr_offsets_ceed));
94*4d00b080SJeremy L Thompson   CeedElemRestrictionCreate(ceed, num_elem, elem_size, num_comp, 1, num_dof, CEED_MEM_HOST, CEED_COPY_VALUES, elem_restr_offsets_ceed, elem_restr);
95*4d00b080SJeremy L Thompson   PetscCall(PetscFree(elem_restr_offsets_ceed));
965754ecacSJeremy L Thompson 
97ee4ca9cbSJames Wright   PetscFunctionReturn(PETSC_SUCCESS);
985754ecacSJeremy L Thompson };
995754ecacSJeremy L Thompson 
1005754ecacSJeremy L Thompson // Utility function to get Ceed Restriction for each domain
1012b730f8bSJeremy L Thompson PetscErrorCode GetRestrictionForDomain(Ceed ceed, DM dm, CeedInt height, DMLabel domain_label, PetscInt value, CeedInt Q, CeedInt q_data_size,
1022b730f8bSJeremy L Thompson                                        CeedElemRestriction *elem_restr_q, CeedElemRestriction *elem_restr_x, CeedElemRestriction *elem_restr_qd_i) {
1035754ecacSJeremy L Thompson   DM       dm_coord;
104*4d00b080SJeremy L Thompson   CeedInt  num_local_elem, Q_dim;
105*4d00b080SJeremy L Thompson   PetscInt dim;
1065754ecacSJeremy L Thompson 
1075754ecacSJeremy L Thompson   PetscFunctionBeginUser;
1085754ecacSJeremy L Thompson 
1092b730f8bSJeremy L Thompson   PetscCall(DMGetDimension(dm, &dim));
1105754ecacSJeremy L Thompson   dim -= height;
1115754ecacSJeremy L Thompson   Q_dim = CeedIntPow(Q, dim);
1122b730f8bSJeremy L Thompson   PetscCall(DMGetCoordinateDM(dm, &dm_coord));
1132b730f8bSJeremy L Thompson   PetscCall(DMPlexSetClosurePermutationTensor(dm_coord, PETSC_DETERMINE, NULL));
1145754ecacSJeremy L Thompson   if (elem_restr_q) {
1152b730f8bSJeremy L Thompson     PetscCall(CreateRestrictionFromPlex(ceed, dm, height, domain_label, value, elem_restr_q));
1165754ecacSJeremy L Thompson   }
1175754ecacSJeremy L Thompson   if (elem_restr_x) {
1182b730f8bSJeremy L Thompson     PetscCall(CreateRestrictionFromPlex(ceed, dm_coord, height, domain_label, value, elem_restr_x));
1195754ecacSJeremy L Thompson   }
1205754ecacSJeremy L Thompson   if (elem_restr_qd_i) {
1215754ecacSJeremy L Thompson     CeedElemRestrictionGetNumElements(*elem_restr_q, &num_local_elem);
1222b730f8bSJeremy L Thompson     CeedElemRestrictionCreateStrided(ceed, num_local_elem, Q_dim, q_data_size, q_data_size * num_local_elem * Q_dim, CEED_STRIDES_BACKEND,
1232b730f8bSJeremy L Thompson                                      elem_restr_qd_i);
1245754ecacSJeremy L Thompson   }
1255754ecacSJeremy L Thompson 
126ee4ca9cbSJames Wright   PetscFunctionReturn(PETSC_SUCCESS);
1275754ecacSJeremy L Thompson };
1285754ecacSJeremy L Thompson 
1295754ecacSJeremy L Thompson // Set up libCEED on the fine grid for a given degree
1302b730f8bSJeremy L Thompson PetscErrorCode SetupLibceedFineLevel(DM dm, DM dm_energy, DM dm_diagnostic, Ceed ceed, AppCtx app_ctx, CeedQFunctionContext phys_ctx,
1312b730f8bSJeremy L Thompson                                      ProblemData problem_data, PetscInt fine_level, PetscInt num_comp_u, PetscInt U_g_size, PetscInt U_loc_size,
1322b730f8bSJeremy L Thompson                                      CeedVector force_ceed, CeedVector neumann_ceed, CeedData *data) {
1335754ecacSJeremy L Thompson   CeedInt            P = app_ctx->level_degrees[fine_level] + 1;
1345754ecacSJeremy L Thompson   CeedInt            Q = app_ctx->level_degrees[fine_level] + 1 + app_ctx->q_extra;
135*4d00b080SJeremy L Thompson   CeedInt            num_comp_x, num_comp_e = 1, num_comp_d = 5;
1365754ecacSJeremy L Thompson   CeedInt            num_qpts;
137a61c78d6SJeremy L Thompson   CeedInt            q_data_size    = problem_data.q_data_size;
1385754ecacSJeremy L Thompson   forcingType        forcing_choice = app_ctx->forcing_choice;
1395754ecacSJeremy L Thompson   DM                 dm_coord;
1405754ecacSJeremy L Thompson   Vec                coords;
141*4d00b080SJeremy L Thompson   PetscInt           c_start, c_end, num_elem, dim;
1425754ecacSJeremy L Thompson   const PetscScalar *coordArray;
1435754ecacSJeremy L Thompson   CeedVector         x_coord;
1445754ecacSJeremy L Thompson   CeedQFunction      qf_setup_geo, qf_residual, qf_jacobian, qf_energy, qf_diagnostic;
1455754ecacSJeremy L Thompson   CeedOperator       op_setup_geo, op_residual, op_jacobian, op_energy, op_diagnostic;
1465754ecacSJeremy L Thompson 
1475754ecacSJeremy L Thompson   PetscFunctionBeginUser;
1485754ecacSJeremy L Thompson 
1495754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
1505754ecacSJeremy L Thompson   // libCEED bases
1515754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
1522b730f8bSJeremy L Thompson   PetscCall(DMGetDimension(dm, &dim));
1535754ecacSJeremy L Thompson   num_comp_x = dim;
1545754ecacSJeremy L Thompson   // -- Coordinate basis
1552b730f8bSJeremy L Thompson   CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_x, 2, Q, problem_data.quadrature_mode, &data[fine_level]->basis_x);
1565754ecacSJeremy L Thompson   // -- Solution basis
1572b730f8bSJeremy L Thompson   CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_u, P, Q, problem_data.quadrature_mode, &data[fine_level]->basis_u);
1585754ecacSJeremy L Thompson   // -- Energy basis
1592b730f8bSJeremy L Thompson   CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_e, P, Q, problem_data.quadrature_mode, &data[fine_level]->basis_energy);
1605754ecacSJeremy L Thompson   // -- Diagnostic output basis
1612b730f8bSJeremy L Thompson   CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_u, P, P, CEED_GAUSS_LOBATTO, &data[fine_level]->basis_diagnostic);
1625754ecacSJeremy L Thompson 
1635754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
1645754ecacSJeremy L Thompson   // libCEED restrictions
1655754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
1662b730f8bSJeremy L Thompson   PetscCall(DMGetCoordinateDM(dm, &dm_coord));
1672b730f8bSJeremy L Thompson   PetscCall(DMPlexSetClosurePermutationTensor(dm_coord, PETSC_DETERMINE, NULL));
1685754ecacSJeremy L Thompson 
1695754ecacSJeremy L Thompson   // -- Coordinate restriction
1702b730f8bSJeremy L Thompson   PetscCall(CreateRestrictionFromPlex(ceed, dm_coord, 0, 0, 0, &(data[fine_level]->elem_restr_x)));
1715754ecacSJeremy L Thompson   // -- Solution restriction
1722b730f8bSJeremy L Thompson   PetscCall(CreateRestrictionFromPlex(ceed, dm, 0, 0, 0, &data[fine_level]->elem_restr_u));
1735754ecacSJeremy L Thompson   // -- Energy restriction
1742b730f8bSJeremy L Thompson   PetscCall(CreateRestrictionFromPlex(ceed, dm_energy, 0, 0, 0, &data[fine_level]->elem_restr_energy));
1755754ecacSJeremy L Thompson   // -- Diagnostic data restriction
1762b730f8bSJeremy L Thompson   PetscCall(CreateRestrictionFromPlex(ceed, dm_diagnostic, 0, 0, 0, &data[fine_level]->elem_restr_diagnostic));
1775754ecacSJeremy L Thompson 
1785754ecacSJeremy L Thompson   // -- Stored data at quadrature points
1792b730f8bSJeremy L Thompson   PetscCall(DMPlexGetHeightStratum(dm, 0, &c_start, &c_end));
1805754ecacSJeremy L Thompson   num_elem = c_end - c_start;
1815754ecacSJeremy L Thompson   CeedBasisGetNumQuadraturePoints(data[fine_level]->basis_u, &num_qpts);
1825754ecacSJeremy L Thompson   // ---- Geometric data restriction, residual and Jacobian operators
1832b730f8bSJeremy L Thompson   CeedElemRestrictionCreateStrided(ceed, num_elem, num_qpts, q_data_size, num_elem * num_qpts * q_data_size, CEED_STRIDES_BACKEND,
1845754ecacSJeremy L Thompson                                    &data[fine_level]->elem_restr_geo_data_i);
1855754ecacSJeremy L Thompson   // ---- Stored field restrictions
1865754ecacSJeremy L Thompson   for (CeedInt i = 0; i < problem_data.number_fields_stored; i++) {
1872b730f8bSJeremy L Thompson     CeedElemRestrictionCreateStrided(ceed, num_elem, num_qpts, problem_data.field_sizes[i], num_elem * num_qpts * problem_data.field_sizes[i],
1882b730f8bSJeremy L Thompson                                      CEED_STRIDES_BACKEND, &data[fine_level]->elem_restr_stored_fields_i[i]);
1895754ecacSJeremy L Thompson   }
1905754ecacSJeremy L Thompson   // ---- Geometric data restriction, diagnostic operator
1912b730f8bSJeremy L Thompson   CeedElemRestrictionCreateStrided(ceed, num_elem, P * P * P, q_data_size, num_elem * P * P * P * q_data_size, CEED_STRIDES_BACKEND,
1925754ecacSJeremy L Thompson                                    &data[fine_level]->elem_restr_geo_data_diagnostic_i);
1935754ecacSJeremy L Thompson 
1945754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
1955754ecacSJeremy L Thompson   // Element coordinates
1965754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
1972b730f8bSJeremy L Thompson   PetscCall(DMGetCoordinatesLocal(dm, &coords));
1982b730f8bSJeremy L Thompson   PetscCall(VecGetArrayRead(coords, &coordArray));
1995754ecacSJeremy L Thompson 
2005754ecacSJeremy L Thompson   CeedElemRestrictionCreateVector(data[fine_level]->elem_restr_x, &x_coord, NULL);
2012b730f8bSJeremy L Thompson   CeedVectorSetArray(x_coord, CEED_MEM_HOST, CEED_COPY_VALUES, (PetscScalar *)coordArray);
2022b730f8bSJeremy L Thompson   PetscCall(VecRestoreArrayRead(coords, &coordArray));
2035754ecacSJeremy L Thompson 
2045754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
2055754ecacSJeremy L Thompson   // Persistent libCEED vectors
2065754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
2075754ecacSJeremy L Thompson   // -- Operator action variables
2085754ecacSJeremy L Thompson   CeedVectorCreate(ceed, U_loc_size, &data[fine_level]->x_ceed);
2095754ecacSJeremy L Thompson   CeedVectorCreate(ceed, U_loc_size, &data[fine_level]->y_ceed);
2105754ecacSJeremy L Thompson   // -- Geometric data vector
2112b730f8bSJeremy L Thompson   CeedVectorCreate(ceed, num_elem * num_qpts * q_data_size, &data[fine_level]->geo_data);
2125754ecacSJeremy L Thompson   // -- Stored field vectors
2135754ecacSJeremy L Thompson   for (CeedInt i = 0; i < problem_data.number_fields_stored; i++) {
2142b730f8bSJeremy L Thompson     CeedVectorCreate(ceed, num_elem * num_qpts * problem_data.field_sizes[i], &data[fine_level]->stored_fields[i]);
2155754ecacSJeremy L Thompson   }
2165754ecacSJeremy L Thompson   // -- Collocated geometric data vector
2172b730f8bSJeremy L Thompson   CeedVectorCreate(ceed, num_elem * P * P * P * q_data_size, &data[fine_level]->geo_data_diagnostic);
2185754ecacSJeremy L Thompson 
2195754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
2205754ecacSJeremy L Thompson   // Geometric factor computation
2215754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
222ea61e9acSJeremy L Thompson   // Create the QFunction and Operator that computes the quadrature data geo_data returns dXdx_i,j and w * det.
2235754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
2245754ecacSJeremy L Thompson   // -- QFunction
2252b730f8bSJeremy L Thompson   CeedQFunctionCreateInterior(ceed, 1, problem_data.setup_geo, problem_data.setup_geo_loc, &qf_setup_geo);
2265754ecacSJeremy L Thompson   CeedQFunctionAddInput(qf_setup_geo, "dx", num_comp_x * dim, CEED_EVAL_GRAD);
2275754ecacSJeremy L Thompson   CeedQFunctionAddInput(qf_setup_geo, "weight", 1, CEED_EVAL_WEIGHT);
228a61c78d6SJeremy L Thompson   CeedQFunctionAddOutput(qf_setup_geo, "qdata", q_data_size, CEED_EVAL_NONE);
2295754ecacSJeremy L Thompson   // -- Operator
2302b730f8bSJeremy L Thompson   CeedOperatorCreate(ceed, qf_setup_geo, CEED_QFUNCTION_NONE, CEED_QFUNCTION_NONE, &op_setup_geo);
2312b730f8bSJeremy L Thompson   CeedOperatorSetField(op_setup_geo, "dx", data[fine_level]->elem_restr_x, data[fine_level]->basis_x, CEED_VECTOR_ACTIVE);
2322b730f8bSJeremy L Thompson   CeedOperatorSetField(op_setup_geo, "weight", CEED_ELEMRESTRICTION_NONE, data[fine_level]->basis_x, CEED_VECTOR_NONE);
233356036faSJeremy L Thompson   CeedOperatorSetField(op_setup_geo, "qdata", data[fine_level]->elem_restr_geo_data_i, CEED_BASIS_NONE, CEED_VECTOR_ACTIVE);
2345754ecacSJeremy L Thompson   // -- Compute the quadrature data
2352b730f8bSJeremy L Thompson   CeedOperatorApply(op_setup_geo, x_coord, data[fine_level]->geo_data, CEED_REQUEST_IMMEDIATE);
2365754ecacSJeremy L Thompson   // -- Cleanup
2375754ecacSJeremy L Thompson   CeedQFunctionDestroy(&qf_setup_geo);
2385754ecacSJeremy L Thompson   CeedOperatorDestroy(&op_setup_geo);
2395754ecacSJeremy L Thompson 
2405754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
2415754ecacSJeremy L Thompson   // Local residual evaluator
2425754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
243ea61e9acSJeremy L Thompson   // Create the QFunction and Operator that computes the residual of the non-linear PDE.
2445754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
2455754ecacSJeremy L Thompson   // -- QFunction
2462b730f8bSJeremy L Thompson   CeedQFunctionCreateInterior(ceed, 1, problem_data.residual, problem_data.residual_loc, &qf_residual);
2475754ecacSJeremy L Thompson   CeedQFunctionAddInput(qf_residual, "du", num_comp_u * dim, CEED_EVAL_GRAD);
248a61c78d6SJeremy L Thompson   CeedQFunctionAddInput(qf_residual, "qdata", q_data_size, CEED_EVAL_NONE);
2495754ecacSJeremy L Thompson   CeedQFunctionAddOutput(qf_residual, "dv", num_comp_u * dim, CEED_EVAL_GRAD);
2505754ecacSJeremy L Thompson   for (CeedInt i = 0; i < problem_data.number_fields_stored; i++) {
2512b730f8bSJeremy L Thompson     CeedQFunctionAddOutput(qf_residual, problem_data.field_names[i], problem_data.field_sizes[i], CEED_EVAL_NONE);
2525754ecacSJeremy L Thompson   }
2535754ecacSJeremy L Thompson   CeedQFunctionSetContext(qf_residual, phys_ctx);
2545754ecacSJeremy L Thompson   // -- Operator
2552b730f8bSJeremy L Thompson   CeedOperatorCreate(ceed, qf_residual, CEED_QFUNCTION_NONE, CEED_QFUNCTION_NONE, &op_residual);
2562b730f8bSJeremy L Thompson   CeedOperatorSetField(op_residual, "du", data[fine_level]->elem_restr_u, data[fine_level]->basis_u, CEED_VECTOR_ACTIVE);
257356036faSJeremy L Thompson   CeedOperatorSetField(op_residual, "qdata", data[fine_level]->elem_restr_geo_data_i, CEED_BASIS_NONE, data[fine_level]->geo_data);
2582b730f8bSJeremy L Thompson   CeedOperatorSetField(op_residual, "dv", data[fine_level]->elem_restr_u, data[fine_level]->basis_u, CEED_VECTOR_ACTIVE);
2595754ecacSJeremy L Thompson   for (CeedInt i = 0; i < problem_data.number_fields_stored; i++) {
260356036faSJeremy L Thompson     CeedOperatorSetField(op_residual, problem_data.field_names[i], data[fine_level]->elem_restr_stored_fields_i[i], CEED_BASIS_NONE,
2615754ecacSJeremy L Thompson                          data[fine_level]->stored_fields[i]);
2625754ecacSJeremy L Thompson   }
2635754ecacSJeremy L Thompson   // -- Save libCEED data
2645754ecacSJeremy L Thompson   data[fine_level]->qf_residual = qf_residual;
2655754ecacSJeremy L Thompson   data[fine_level]->op_residual = op_residual;
2665754ecacSJeremy L Thompson 
2675754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
2685754ecacSJeremy L Thompson   // Jacobian evaluator
2695754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
270ea61e9acSJeremy L Thompson   // Create the QFunction and Operator that computes the action of the Jacobian for each linear solve.
2715754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
2725754ecacSJeremy L Thompson   // -- QFunction
2732b730f8bSJeremy L Thompson   CeedQFunctionCreateInterior(ceed, 1, problem_data.jacobian, problem_data.jacobian_loc, &qf_jacobian);
2745754ecacSJeremy L Thompson   CeedQFunctionAddInput(qf_jacobian, "delta du", num_comp_u * dim, CEED_EVAL_GRAD);
275a61c78d6SJeremy L Thompson   CeedQFunctionAddInput(qf_jacobian, "qdata", q_data_size, CEED_EVAL_NONE);
2765754ecacSJeremy L Thompson   for (CeedInt i = 0; i < problem_data.number_fields_stored; i++) {
2772b730f8bSJeremy L Thompson     CeedQFunctionAddInput(qf_jacobian, problem_data.field_names[i], problem_data.field_sizes[i], CEED_EVAL_NONE);
2785754ecacSJeremy L Thompson   }
2795754ecacSJeremy L Thompson   CeedQFunctionAddOutput(qf_jacobian, "delta dv", num_comp_u * dim, CEED_EVAL_GRAD);
2805754ecacSJeremy L Thompson   CeedQFunctionSetContext(qf_jacobian, phys_ctx);
2815754ecacSJeremy L Thompson   // -- Operator
2822b730f8bSJeremy L Thompson   CeedOperatorCreate(ceed, qf_jacobian, CEED_QFUNCTION_NONE, CEED_QFUNCTION_NONE, &op_jacobian);
2832b730f8bSJeremy L Thompson   CeedOperatorSetField(op_jacobian, "delta du", data[fine_level]->elem_restr_u, data[fine_level]->basis_u, CEED_VECTOR_ACTIVE);
284356036faSJeremy L Thompson   CeedOperatorSetField(op_jacobian, "qdata", data[fine_level]->elem_restr_geo_data_i, CEED_BASIS_NONE, data[fine_level]->geo_data);
2852b730f8bSJeremy L Thompson   CeedOperatorSetField(op_jacobian, "delta dv", data[fine_level]->elem_restr_u, data[fine_level]->basis_u, CEED_VECTOR_ACTIVE);
2865754ecacSJeremy L Thompson   for (CeedInt i = 0; i < problem_data.number_fields_stored; i++) {
287356036faSJeremy L Thompson     CeedOperatorSetField(op_jacobian, problem_data.field_names[i], data[fine_level]->elem_restr_stored_fields_i[i], CEED_BASIS_NONE,
2885754ecacSJeremy L Thompson                          data[fine_level]->stored_fields[i]);
2895754ecacSJeremy L Thompson   }
2905754ecacSJeremy L Thompson   // -- Save libCEED data
2915754ecacSJeremy L Thompson   data[fine_level]->qf_jacobian = qf_jacobian;
2925754ecacSJeremy L Thompson   data[fine_level]->op_jacobian = op_jacobian;
2935754ecacSJeremy L Thompson 
2945754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
2955754ecacSJeremy L Thompson   // Traction boundary conditions, if needed
2965754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
2975754ecacSJeremy L Thompson   if (app_ctx->bc_traction_count > 0) {
2985754ecacSJeremy L Thompson     // -- Setup
2995754ecacSJeremy L Thompson     DMLabel domain_label;
3002b730f8bSJeremy L Thompson     PetscCall(DMGetLabel(dm, "Face Sets", &domain_label));
3012b730f8bSJeremy L Thompson     PetscCall(DMGetDimension(dm, &dim));
3025754ecacSJeremy L Thompson 
3035754ecacSJeremy L Thompson     // -- Basis
3045754ecacSJeremy L Thompson     CeedInt   height = 1;
3055754ecacSJeremy L Thompson     CeedBasis basis_x_face, basis_u_face;
3062b730f8bSJeremy L Thompson     CeedBasisCreateTensorH1Lagrange(ceed, dim - height, num_comp_x, 2, Q, problem_data.quadrature_mode, &basis_x_face);
3072b730f8bSJeremy L Thompson     CeedBasisCreateTensorH1Lagrange(ceed, dim - height, num_comp_u, P, Q, problem_data.quadrature_mode, &basis_u_face);
3085754ecacSJeremy L Thompson     // -- QFunction
3095754ecacSJeremy L Thompson     CeedQFunction        qf_traction;
3105754ecacSJeremy L Thompson     CeedQFunctionContext traction_ctx;
3112b730f8bSJeremy L Thompson     CeedQFunctionCreateInterior(ceed, 1, SetupTractionBCs, SetupTractionBCs_loc, &qf_traction);
3125754ecacSJeremy L Thompson     CeedQFunctionContextCreate(ceed, &traction_ctx);
3135754ecacSJeremy L Thompson     CeedQFunctionSetContext(qf_traction, traction_ctx);
3142b730f8bSJeremy L Thompson     CeedQFunctionAddInput(qf_traction, "dx", num_comp_x * (num_comp_x - height), CEED_EVAL_GRAD);
3155754ecacSJeremy L Thompson     CeedQFunctionAddInput(qf_traction, "weight", 1, CEED_EVAL_WEIGHT);
3165754ecacSJeremy L Thompson     CeedQFunctionAddOutput(qf_traction, "v", num_comp_u, CEED_EVAL_INTERP);
3175754ecacSJeremy L Thompson 
3185754ecacSJeremy L Thompson     // -- Compute contribution on each boundary face
3195754ecacSJeremy L Thompson     for (CeedInt i = 0; i < app_ctx->bc_traction_count; i++) {
3205754ecacSJeremy L Thompson       CeedElemRestriction elem_restr_x_face, elem_restr_u_face;
3215754ecacSJeremy L Thompson       CeedOperator        op_traction;
3222b730f8bSJeremy L Thompson       CeedQFunctionContextSetData(traction_ctx, CEED_MEM_HOST, CEED_USE_POINTER, 3 * sizeof(CeedScalar), app_ctx->bc_traction_vector[i]);
3235754ecacSJeremy L Thompson       // Setup restriction
3242b730f8bSJeremy L Thompson       PetscCall(
3252b730f8bSJeremy L Thompson           GetRestrictionForDomain(ceed, dm, 1, domain_label, app_ctx->bc_traction_faces[i], Q, 0, &elem_restr_u_face, &elem_restr_x_face, NULL));
3265754ecacSJeremy L Thompson       // ---- Create boundary Operator
3275754ecacSJeremy L Thompson       CeedOperatorCreate(ceed, qf_traction, NULL, NULL, &op_traction);
3282b730f8bSJeremy L Thompson       CeedOperatorSetField(op_traction, "dx", elem_restr_x_face, basis_x_face, CEED_VECTOR_ACTIVE);
3292b730f8bSJeremy L Thompson       CeedOperatorSetField(op_traction, "weight", CEED_ELEMRESTRICTION_NONE, basis_x_face, CEED_VECTOR_NONE);
3302b730f8bSJeremy L Thompson       CeedOperatorSetField(op_traction, "v", elem_restr_u_face, basis_u_face, CEED_VECTOR_ACTIVE);
3315754ecacSJeremy L Thompson       // ---- Compute traction on face
3322b730f8bSJeremy L Thompson       CeedOperatorApplyAdd(op_traction, x_coord, neumann_ceed, CEED_REQUEST_IMMEDIATE);
3335754ecacSJeremy L Thompson       // ---- Cleanup
3345754ecacSJeremy L Thompson       CeedElemRestrictionDestroy(&elem_restr_x_face);
3355754ecacSJeremy L Thompson       CeedElemRestrictionDestroy(&elem_restr_u_face);
3365754ecacSJeremy L Thompson       CeedOperatorDestroy(&op_traction);
3375754ecacSJeremy L Thompson     }
3385754ecacSJeremy L Thompson     // -- Cleanup
3395754ecacSJeremy L Thompson     CeedBasisDestroy(&basis_x_face);
3405754ecacSJeremy L Thompson     CeedBasisDestroy(&basis_u_face);
3415754ecacSJeremy L Thompson     CeedQFunctionDestroy(&qf_traction);
3425754ecacSJeremy L Thompson     CeedQFunctionContextDestroy(&traction_ctx);
3435754ecacSJeremy L Thompson   }
3445754ecacSJeremy L Thompson 
3455754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
3465754ecacSJeremy L Thompson   // Forcing term, if needed
3475754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
348ea61e9acSJeremy L Thompson   // Create the QFunction and Operator that computes the forcing term (RHS) for the non-linear PDE.
3495754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
3505754ecacSJeremy L Thompson   if (forcing_choice != FORCE_NONE) {
3515754ecacSJeremy L Thompson     CeedQFunction qf_setup_force;
3525754ecacSJeremy L Thompson     CeedOperator  op_setup_force;
3535754ecacSJeremy L Thompson 
3545754ecacSJeremy L Thompson     // -- QFunction
3552b730f8bSJeremy L Thompson     CeedQFunctionCreateInterior(ceed, 1, forcing_options[forcing_choice].setup_forcing, forcing_options[forcing_choice].setup_forcing_loc,
3565754ecacSJeremy L Thompson                                 &qf_setup_force);
3575754ecacSJeremy L Thompson     CeedQFunctionAddInput(qf_setup_force, "x", num_comp_x, CEED_EVAL_INTERP);
3582b730f8bSJeremy L Thompson     CeedQFunctionAddInput(qf_setup_force, "qdata", q_data_size, CEED_EVAL_NONE);
3595754ecacSJeremy L Thompson     CeedQFunctionAddOutput(qf_setup_force, "force", num_comp_u, CEED_EVAL_INTERP);
3605754ecacSJeremy L Thompson     if (forcing_choice == FORCE_MMS) {
3615754ecacSJeremy L Thompson       CeedQFunctionSetContext(qf_setup_force, phys_ctx);
3625754ecacSJeremy L Thompson     } else {
3635754ecacSJeremy L Thompson       CeedQFunctionContext ctxForcing;
3645754ecacSJeremy L Thompson       CeedQFunctionContextCreate(ceed, &ctxForcing);
3652b730f8bSJeremy L Thompson       CeedQFunctionContextSetData(ctxForcing, CEED_MEM_HOST, CEED_USE_POINTER, sizeof(*app_ctx->forcing_vector), app_ctx->forcing_vector);
3665754ecacSJeremy L Thompson       CeedQFunctionSetContext(qf_setup_force, ctxForcing);
3675754ecacSJeremy L Thompson       CeedQFunctionContextDestroy(&ctxForcing);
3685754ecacSJeremy L Thompson     }
3695754ecacSJeremy L Thompson     // -- Operator
3702b730f8bSJeremy L Thompson     CeedOperatorCreate(ceed, qf_setup_force, CEED_QFUNCTION_NONE, CEED_QFUNCTION_NONE, &op_setup_force);
3712b730f8bSJeremy L Thompson     CeedOperatorSetField(op_setup_force, "x", data[fine_level]->elem_restr_x, data[fine_level]->basis_x, CEED_VECTOR_ACTIVE);
372356036faSJeremy L Thompson     CeedOperatorSetField(op_setup_force, "qdata", data[fine_level]->elem_restr_geo_data_i, CEED_BASIS_NONE, data[fine_level]->geo_data);
3732b730f8bSJeremy L Thompson     CeedOperatorSetField(op_setup_force, "force", data[fine_level]->elem_restr_u, data[fine_level]->basis_u, CEED_VECTOR_ACTIVE);
3745754ecacSJeremy L Thompson     // -- Compute forcing term
3755754ecacSJeremy L Thompson     CeedOperatorApply(op_setup_force, x_coord, force_ceed, CEED_REQUEST_IMMEDIATE);
3765754ecacSJeremy L Thompson     // -- Cleanup
3775754ecacSJeremy L Thompson     CeedQFunctionDestroy(&qf_setup_force);
3785754ecacSJeremy L Thompson     CeedOperatorDestroy(&op_setup_force);
3795754ecacSJeremy L Thompson   }
3805754ecacSJeremy L Thompson 
3815754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
3825754ecacSJeremy L Thompson   // True solution, for MMS
3835754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
384ea61e9acSJeremy L Thompson   // Create the QFunction and Operator that computes the true solution at the mesh nodes for validation with the manufactured solution.
3855754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
3865754ecacSJeremy L Thompson   if (problem_data.true_soln) {
3875754ecacSJeremy L Thompson     CeedScalar       *true_array;
3885754ecacSJeremy L Thompson     const CeedScalar *mult_array;
3895754ecacSJeremy L Thompson     CeedVector        mult_vec;
3905754ecacSJeremy L Thompson     CeedBasis         basis_x_true;
3915754ecacSJeremy L Thompson     CeedQFunction     qf_true;
3925754ecacSJeremy L Thompson     CeedOperator      op_true;
3935754ecacSJeremy L Thompson 
3945754ecacSJeremy L Thompson     // -- Solution vector
3955754ecacSJeremy L Thompson     CeedVectorCreate(ceed, U_loc_size, &(data[fine_level]->true_soln));
3965754ecacSJeremy L Thompson     // -- Basis
3972b730f8bSJeremy L Thompson     CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_x, 2, P, CEED_GAUSS_LOBATTO, &basis_x_true);
3985754ecacSJeremy L Thompson     // QFunction
3992b730f8bSJeremy L Thompson     CeedQFunctionCreateInterior(ceed, 1, problem_data.true_soln, problem_data.true_soln_loc, &qf_true);
4005754ecacSJeremy L Thompson     CeedQFunctionAddInput(qf_true, "x", num_comp_x, CEED_EVAL_INTERP);
401a61c78d6SJeremy L Thompson     CeedQFunctionAddOutput(qf_true, "true solution", num_comp_u, CEED_EVAL_NONE);
4025754ecacSJeremy L Thompson     // Operator
4032b730f8bSJeremy L Thompson     CeedOperatorCreate(ceed, qf_true, CEED_QFUNCTION_NONE, CEED_QFUNCTION_NONE, &op_true);
4042b730f8bSJeremy L Thompson     CeedOperatorSetField(op_true, "x", data[fine_level]->elem_restr_x, basis_x_true, CEED_VECTOR_ACTIVE);
405356036faSJeremy L Thompson     CeedOperatorSetField(op_true, "true solution", data[fine_level]->elem_restr_u, CEED_BASIS_NONE, CEED_VECTOR_ACTIVE);
4065754ecacSJeremy L Thompson     // -- Compute true solution
4072b730f8bSJeremy L Thompson     CeedOperatorApply(op_true, x_coord, data[fine_level]->true_soln, CEED_REQUEST_IMMEDIATE);
4085754ecacSJeremy L Thompson     // -- Multiplicity calculation
4092b730f8bSJeremy L Thompson     CeedElemRestrictionCreateVector(data[fine_level]->elem_restr_u, &mult_vec, NULL);
4105754ecacSJeremy L Thompson     CeedVectorSetValue(mult_vec, 0.);
4115754ecacSJeremy L Thompson     CeedElemRestrictionGetMultiplicity(data[fine_level]->elem_restr_u, mult_vec);
4125754ecacSJeremy L Thompson     // -- Multiplicity correction
4135754ecacSJeremy L Thompson     CeedVectorGetArray(data[fine_level]->true_soln, CEED_MEM_HOST, &true_array);
4145754ecacSJeremy L Thompson     CeedVectorGetArrayRead(mult_vec, CEED_MEM_HOST, &mult_array);
4152b730f8bSJeremy L Thompson     for (CeedInt i = 0; i < U_loc_size; i++) true_array[i] /= mult_array[i];
4165754ecacSJeremy L Thompson     CeedVectorRestoreArray(data[fine_level]->true_soln, &true_array);
4175754ecacSJeremy L Thompson     CeedVectorRestoreArrayRead(mult_vec, &mult_array);
4185754ecacSJeremy L Thompson     // -- Cleanup
4195754ecacSJeremy L Thompson     CeedVectorDestroy(&mult_vec);
4205754ecacSJeremy L Thompson     CeedBasisDestroy(&basis_x_true);
4215754ecacSJeremy L Thompson     CeedQFunctionDestroy(&qf_true);
4225754ecacSJeremy L Thompson     CeedOperatorDestroy(&op_true);
4235754ecacSJeremy L Thompson   }
4245754ecacSJeremy L Thompson 
4255754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
4265754ecacSJeremy L Thompson   // Local energy computation
4275754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
4285754ecacSJeremy L Thompson   // Create the QFunction and Operator that computes the strain energy
4295754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
4305754ecacSJeremy L Thompson   // -- QFunction
4312b730f8bSJeremy L Thompson   CeedQFunctionCreateInterior(ceed, 1, problem_data.energy, problem_data.energy_loc, &qf_energy);
4325754ecacSJeremy L Thompson   CeedQFunctionAddInput(qf_energy, "du", num_comp_u * dim, CEED_EVAL_GRAD);
433a61c78d6SJeremy L Thompson   CeedQFunctionAddInput(qf_energy, "qdata", q_data_size, CEED_EVAL_NONE);
4345754ecacSJeremy L Thompson   CeedQFunctionAddOutput(qf_energy, "energy", num_comp_e, CEED_EVAL_INTERP);
4355754ecacSJeremy L Thompson   CeedQFunctionSetContext(qf_energy, phys_ctx);
4365754ecacSJeremy L Thompson   // -- Operator
4372b730f8bSJeremy L Thompson   CeedOperatorCreate(ceed, qf_energy, CEED_QFUNCTION_NONE, CEED_QFUNCTION_NONE, &op_energy);
4382b730f8bSJeremy L Thompson   CeedOperatorSetField(op_energy, "du", data[fine_level]->elem_restr_u, data[fine_level]->basis_u, CEED_VECTOR_ACTIVE);
439356036faSJeremy L Thompson   CeedOperatorSetField(op_energy, "qdata", data[fine_level]->elem_restr_geo_data_i, CEED_BASIS_NONE, data[fine_level]->geo_data);
4402b730f8bSJeremy L Thompson   CeedOperatorSetField(op_energy, "energy", data[fine_level]->elem_restr_energy, data[fine_level]->basis_energy, CEED_VECTOR_ACTIVE);
4415754ecacSJeremy L Thompson   // -- Save libCEED data
4425754ecacSJeremy L Thompson   data[fine_level]->qf_energy = qf_energy;
4435754ecacSJeremy L Thompson   data[fine_level]->op_energy = op_energy;
4445754ecacSJeremy L Thompson 
4455754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
4465754ecacSJeremy L Thompson   // Diagnostic value computation
4475754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
4485754ecacSJeremy L Thompson   // Create the QFunction and Operator that computes nodal diagnostic quantities
4495754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
4505754ecacSJeremy L Thompson   // Geometric factors
4515754ecacSJeremy L Thompson   // -- Coordinate basis
4525754ecacSJeremy L Thompson   CeedBasis basis_x;
4532b730f8bSJeremy L Thompson   CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_x, 2, Q, CEED_GAUSS_LOBATTO, &basis_x);
4545754ecacSJeremy L Thompson   // -- QFunction
4552b730f8bSJeremy L Thompson   CeedQFunctionCreateInterior(ceed, 1, problem_data.setup_geo, problem_data.setup_geo_loc, &qf_setup_geo);
4565754ecacSJeremy L Thompson   CeedQFunctionAddInput(qf_setup_geo, "dx", num_comp_x * dim, CEED_EVAL_GRAD);
4575754ecacSJeremy L Thompson   CeedQFunctionAddInput(qf_setup_geo, "weight", 1, CEED_EVAL_WEIGHT);
458a61c78d6SJeremy L Thompson   CeedQFunctionAddOutput(qf_setup_geo, "qdata", q_data_size, CEED_EVAL_NONE);
4595754ecacSJeremy L Thompson   // -- Operator
4602b730f8bSJeremy L Thompson   CeedOperatorCreate(ceed, qf_setup_geo, CEED_QFUNCTION_NONE, CEED_QFUNCTION_NONE, &op_setup_geo);
4612b730f8bSJeremy L Thompson   CeedOperatorSetField(op_setup_geo, "dx", data[fine_level]->elem_restr_x, basis_x, CEED_VECTOR_ACTIVE);
4622b730f8bSJeremy L Thompson   CeedOperatorSetField(op_setup_geo, "weight", CEED_ELEMRESTRICTION_NONE, basis_x, CEED_VECTOR_NONE);
463356036faSJeremy L Thompson   CeedOperatorSetField(op_setup_geo, "qdata", data[fine_level]->elem_restr_geo_data_diagnostic_i, CEED_BASIS_NONE, CEED_VECTOR_ACTIVE);
4645754ecacSJeremy L Thompson   // -- Compute the quadrature data
4652b730f8bSJeremy L Thompson   CeedOperatorApply(op_setup_geo, x_coord, data[fine_level]->geo_data_diagnostic, CEED_REQUEST_IMMEDIATE);
4665754ecacSJeremy L Thompson   // -- Cleanup
4675754ecacSJeremy L Thompson   CeedBasisDestroy(&basis_x);
4685754ecacSJeremy L Thompson   CeedQFunctionDestroy(&qf_setup_geo);
4695754ecacSJeremy L Thompson   CeedOperatorDestroy(&op_setup_geo);
4705754ecacSJeremy L Thompson 
4715754ecacSJeremy L Thompson   // Diagnostic quantities
4725754ecacSJeremy L Thompson   // -- QFunction
4732b730f8bSJeremy L Thompson   CeedQFunctionCreateInterior(ceed, 1, problem_data.diagnostic, problem_data.diagnostic_loc, &qf_diagnostic);
4745754ecacSJeremy L Thompson   CeedQFunctionAddInput(qf_diagnostic, "u", num_comp_u, CEED_EVAL_INTERP);
4755754ecacSJeremy L Thompson   CeedQFunctionAddInput(qf_diagnostic, "du", num_comp_u * dim, CEED_EVAL_GRAD);
476a61c78d6SJeremy L Thompson   CeedQFunctionAddInput(qf_diagnostic, "qdata", q_data_size, CEED_EVAL_NONE);
4772b730f8bSJeremy L Thompson   CeedQFunctionAddOutput(qf_diagnostic, "diagnostic values", num_comp_u + num_comp_d, CEED_EVAL_NONE);
4785754ecacSJeremy L Thompson   CeedQFunctionSetContext(qf_diagnostic, phys_ctx);
4795754ecacSJeremy L Thompson   // -- Operator
4802b730f8bSJeremy L Thompson   CeedOperatorCreate(ceed, qf_diagnostic, CEED_QFUNCTION_NONE, CEED_QFUNCTION_NONE, &op_diagnostic);
4812b730f8bSJeremy L Thompson   CeedOperatorSetField(op_diagnostic, "u", data[fine_level]->elem_restr_u, data[fine_level]->basis_diagnostic, CEED_VECTOR_ACTIVE);
4822b730f8bSJeremy L Thompson   CeedOperatorSetField(op_diagnostic, "du", data[fine_level]->elem_restr_u, data[fine_level]->basis_diagnostic, CEED_VECTOR_ACTIVE);
483356036faSJeremy L Thompson   CeedOperatorSetField(op_diagnostic, "qdata", data[fine_level]->elem_restr_geo_data_diagnostic_i, CEED_BASIS_NONE,
4842b730f8bSJeremy L Thompson                        data[fine_level]->geo_data_diagnostic);
485356036faSJeremy L Thompson   CeedOperatorSetField(op_diagnostic, "diagnostic values", data[fine_level]->elem_restr_diagnostic, CEED_BASIS_NONE, CEED_VECTOR_ACTIVE);
4865754ecacSJeremy L Thompson   // -- Save libCEED data
4875754ecacSJeremy L Thompson   data[fine_level]->qf_diagnostic = qf_diagnostic;
4885754ecacSJeremy L Thompson   data[fine_level]->op_diagnostic = op_diagnostic;
4895754ecacSJeremy L Thompson 
4905754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
4915754ecacSJeremy L Thompson   // Cleanup
4925754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
4935754ecacSJeremy L Thompson   CeedVectorDestroy(&x_coord);
4945754ecacSJeremy L Thompson 
495ee4ca9cbSJames Wright   PetscFunctionReturn(PETSC_SUCCESS);
4965754ecacSJeremy L Thompson };
4975754ecacSJeremy L Thompson 
4985754ecacSJeremy L Thompson // Set up libCEED multigrid level for a given degree
4995754ecacSJeremy L Thompson //   Prolongation and Restriction are between level and level+1
5002b730f8bSJeremy L Thompson PetscErrorCode SetupLibceedLevel(DM dm, Ceed ceed, AppCtx app_ctx, ProblemData problem_data, PetscInt level, PetscInt num_comp_u, PetscInt U_g_size,
5012b730f8bSJeremy L Thompson                                  PetscInt U_loc_size, CeedVector fine_mult, CeedData *data) {
5025754ecacSJeremy L Thompson   CeedInt      fine_level = app_ctx->num_levels - 1;
5035754ecacSJeremy L Thompson   CeedInt      P          = app_ctx->level_degrees[level] + 1;
5045754ecacSJeremy L Thompson   CeedInt      Q          = app_ctx->level_degrees[fine_level] + 1 + app_ctx->q_extra;
505*4d00b080SJeremy L Thompson   PetscInt     dim;
5065754ecacSJeremy L Thompson   CeedOperator op_jacobian, op_prolong, op_restrict;
5075754ecacSJeremy L Thompson 
5085754ecacSJeremy L Thompson   PetscFunctionBeginUser;
5095754ecacSJeremy L Thompson 
5102b730f8bSJeremy L Thompson   PetscCall(DMGetDimension(dm, &dim));
5115754ecacSJeremy L Thompson 
5125754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
5135754ecacSJeremy L Thompson   // libCEED restrictions
5145754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
5155754ecacSJeremy L Thompson   // -- Solution restriction
5162b730f8bSJeremy L Thompson   PetscCall(CreateRestrictionFromPlex(ceed, dm, 0, 0, 0, &data[level]->elem_restr_u));
5175754ecacSJeremy L Thompson 
5185754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
5195754ecacSJeremy L Thompson   // libCEED bases
5205754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
5215754ecacSJeremy L Thompson   // -- Solution basis
5222b730f8bSJeremy L Thompson   CeedBasisCreateTensorH1Lagrange(ceed, dim, num_comp_u, P, Q, problem_data.quadrature_mode, &data[level]->basis_u);
5235754ecacSJeremy L Thompson 
5245754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
5255754ecacSJeremy L Thompson   // Persistent libCEED vectors
5265754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
5275754ecacSJeremy L Thompson   CeedVectorCreate(ceed, U_loc_size, &data[level]->x_ceed);
5285754ecacSJeremy L Thompson   CeedVectorCreate(ceed, U_loc_size, &data[level]->y_ceed);
5295754ecacSJeremy L Thompson 
5305754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
5315754ecacSJeremy L Thompson   // Coarse Grid, Prolongation, and Restriction Operators
5325754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
533ea61e9acSJeremy L Thompson   // Create the Operators that compute the prolongation and restriction between the p-multigrid levels and the coarse grid eval.
5345754ecacSJeremy L Thompson   // ---------------------------------------------------------------------------
5352b730f8bSJeremy L Thompson   CeedOperatorMultigridLevelCreate(data[level + 1]->op_jacobian, fine_mult, data[level]->elem_restr_u, data[level]->basis_u, &op_jacobian,
5362b730f8bSJeremy L Thompson                                    &op_prolong, &op_restrict);
5375754ecacSJeremy L Thompson 
5385754ecacSJeremy L Thompson   // -- Save libCEED data
5395754ecacSJeremy L Thompson   data[level]->op_jacobian     = op_jacobian;
5405754ecacSJeremy L Thompson   data[level + 1]->op_prolong  = op_prolong;
5415754ecacSJeremy L Thompson   data[level + 1]->op_restrict = op_restrict;
5425754ecacSJeremy L Thompson 
543ee4ca9cbSJames Wright   PetscFunctionReturn(PETSC_SUCCESS);
5445754ecacSJeremy L Thompson };
545