1#!/usr/bin/env python 2import os, sys 3 4extraLogs = [] 5petsc_arch = '' 6 7# Use en_US as language so that BuildSystem parses compiler messages in english 8if 'LC_LOCAL' in os.environ and os.environ['LC_LOCAL'] != '' and os.environ['LC_LOCAL'] != 'en_US' and os.environ['LC_LOCAL']!= 'en_US.UTF-8': os.environ['LC_LOCAL'] = 'en_US.UTF-8' 9if 'LANG' in os.environ and os.environ['LANG'] != '' and os.environ['LANG'] != 'en_US' and os.environ['LANG'] != 'en_US.UTF-8': os.environ['LANG'] = 'en_US.UTF-8' 10 11if not hasattr(sys, 'version_info') or not sys.version_info[0] == 2 or not sys.version_info[1] >= 6: 12 print '*******************************************************************************' 13 print '* Python2 version 2.6 or higher is required to run ./configure *' 14 print '* Try: "python2.7 ./configure" or "python2.6 ./configure" *' 15 print '*******************************************************************************' 16 sys.exit(4) 17 18def check_for_option_mistakes(opts): 19 for opt in opts[1:]: 20 name = opt.split('=')[0] 21 if name.find('_') >= 0: 22 exception = False 23 for exc in ['mkl_cpardiso', 'mkl_pardiso', 'superlu_dist', 'superlu_mt', 'PETSC_ARCH', 'PETSC_DIR', 'CXX_CXXFLAGS', 'LD_SHARED', 'CC_LINKER_FLAGS', 'CXX_LINKER_FLAGS', 'FC_LINKER_FLAGS', 'AR_FLAGS', 'C_VERSION', 'CXX_VERSION', 'FC_VERSION', 'size_t', 'MPI_Comm','MPI_Fint','int64_t']: 24 if name.find(exc) >= 0: 25 exception = True 26 if not exception: 27 raise ValueError('The option '+name+' should probably be '+name.replace('_', '-')); 28 if opt.find('=') >=0: 29 optval = opt.split('=')[1] 30 if optval == 'ifneeded': 31 raise ValueError('The option '+opt+' should probably be '+opt.replace('ifneeded', '1')); 32 return 33 34def check_for_unsupported_combinations(opts): 35 if '--with-precision=single' in opts and '--with-clanguage=cxx' in opts and '--with-scalar-type=complex' in opts: 36 sys.exit(ValueError('PETSc does not support single precision complex with C++ clanguage, run with --with-clanguage=c')) 37 38def check_for_option_changed(opts): 39# Document changes in command line options here. 40 optMap = [('with-64bit-indices','with-64-bit-indices'),('c-blas-lapack','f2cblaslapack'),('cholmod','suitesparse'),('umfpack','suitesparse'),('f-blas-lapack','fblaslapack')] 41 for opt in opts[1:]: 42 optname = opt.split('=')[0].strip('-') 43 for oldname,newname in optMap: 44 if optname.find(oldname) >=0: 45 raise ValueError('The option '+opt+' should probably be '+opt.replace(oldname,newname)) 46 return 47 48def check_petsc_arch(opts): 49 # If PETSC_ARCH not specified - use script name (if not configure.py) 50 global petsc_arch 51 found = 0 52 for name in opts: 53 if name.find('PETSC_ARCH=') >= 0: 54 petsc_arch=name.split('=')[1] 55 found = 1 56 break 57 # If not yet specified - use the filename of script 58 if not found: 59 filename = os.path.basename(sys.argv[0]) 60 if not filename.startswith('configure') and not filename.startswith('reconfigure') and not filename.startswith('setup'): 61 petsc_arch=os.path.splitext(os.path.basename(sys.argv[0]))[0] 62 useName = 'PETSC_ARCH='+petsc_arch 63 opts.append(useName) 64 return 0 65 66def chkenable(): 67 #Replace all 'enable-'/'disable-' with 'with-'=0/1/tail 68 #enable-fortran is a special case, the resulting --with-fortran is ambiguous. 69 #Would it mean --with-fc= or --with-fortran-interfaces=? 70 for l in range(0,len(sys.argv)): 71 name = sys.argv[l] 72 if name.find('enable-fortran') >= 0: 73 if name.find('=') == -1: 74 sys.argv[l] = name.replace('enable-fortran','with-fortran-interfaces')+'=1' 75 else: 76 head, tail = name.split('=', 1) 77 sys.argv[l] = head.replace('enable-fortran','with-fortran-interfaces')+'='+tail 78 continue 79 if name.find('disable-fortran') >= 0: 80 if name.find('=') == -1: 81 sys.argv[l] = name.replace('disable-fortran','with-fortran-interfaces')+'=0' 82 else: 83 head, tail = name.split('=', 1) 84 if tail == '1': tail = '0' 85 sys.argv[l] = head.replace('disable-fortran','with-fortran-interfaces')+'='+tail 86 continue 87 88 if name.find('enable-cxx') >= 0: 89 if name.find('=') == -1: 90 sys.argv[l] = name.replace('enable-cxx','with-clanguage=C++') 91 else: 92 head, tail = name.split('=', 1) 93 if tail=='0': 94 sys.argv[l] = head.replace('enable-cxx','with-clanguage=C') 95 else: 96 sys.argv[l] = head.replace('enable-cxx','with-clanguage=C++') 97 continue 98 if name.find('disable-cxx') >= 0: 99 if name.find('=') == -1: 100 sys.argv[l] = name.replace('disable-cxx','with-clanguage=C') 101 else: 102 head, tail = name.split('=', 1) 103 if tail == '0': 104 sys.argv[l] = head.replace('disable-cxx','with-clanguage=C++') 105 else: 106 sys.argv[l] = head.replace('disable-cxx','with-clanguage=C') 107 continue 108 109 110 if name.find('enable-') >= 0: 111 if name.find('=') == -1: 112 sys.argv[l] = name.replace('enable-','with-')+'=1' 113 else: 114 head, tail = name.split('=', 1) 115 sys.argv[l] = head.replace('enable-','with-')+'='+tail 116 if name.find('disable-') >= 0: 117 if name.find('=') == -1: 118 sys.argv[l] = name.replace('disable-','with-')+'=0' 119 else: 120 head, tail = name.split('=', 1) 121 if tail == '1': tail = '0' 122 sys.argv[l] = head.replace('disable-','with-')+'='+tail 123 if name.find('without-') >= 0: 124 if name.find('=') == -1: 125 sys.argv[l] = name.replace('without-','with-')+'=0' 126 else: 127 head, tail = name.split('=', 1) 128 if tail == '1': tail = '0' 129 sys.argv[l] = head.replace('without-','with-')+'='+tail 130 131def argsAddDownload(value,deps = [],options = []): 132 # Adds --download-value to args if the command line DOES NOT already has --with-value or --download-value in it 133 # this is to prevent introducing conflicting arguments to ones that already exist 134 for i in sys.argv: 135 if i.startswith('--with-'+value): return 136 if i.startswith('--download-'+value) and not i.startswith('--download-'+value+'-commit'): return 137 sys.argv.append('--download-'+value) 138 for i in deps: 139 argsAddDownload(i) 140 for i in options: 141 sys.argv.append(i) 142 143def chksynonyms(): 144 #replace common configure options with ones that PETSc BuildSystem recognizes 145 downloadxsdk = 0 146 downloadideas = 0 147 for l in range(0,len(sys.argv)): 148 name = sys.argv[l] 149 150 if name.find('download-xsdk=') >= 0 or name.endswith('download-xsdk'): 151 downloadxsdk = 1 152 153 if name.find('download-ideas=') >= 0 or name.endswith('download-ideas'): 154 downloadideas = 1 155 156 if name.find('with-debug=') >= 0 or name.endswith('with-debug'): 157 if name.find('=') == -1: 158 sys.argv[l] = name.replace('with-debug','with-debugging')+'=1' 159 else: 160 head, tail = name.split('=', 1) 161 sys.argv[l] = head.replace('with-debug','with-debugging')+'='+tail 162 163 if name.find('with-shared=') >= 0 or name.endswith('with-shared'): 164 if name.find('=') == -1: 165 sys.argv[l] = name.replace('with-shared','with-shared-libraries')+'=1' 166 else: 167 head, tail = name.split('=', 1) 168 sys.argv[l] = head.replace('with-shared','with-shared-libraries')+'='+tail 169 170 if name.find('with-index-size=') >=0: 171 head,tail = name.split('=',1) 172 if int(tail)==32: 173 sys.argv[l] = '--with-64-bit-indices=0' 174 elif int(tail)==64: 175 sys.argv[l] = '--with-64-bit-indices=1' 176 else: 177 raise RuntimeError('--with-index-size= must be 32 or 64') 178 179 if name.find('with-precision=') >=0: 180 head,tail = name.split('=',1) 181 if tail.find('quad')>=0: 182 sys.argv[l]='--with-precision=__float128' 183 184 if downloadideas: 185 downloadxsdk = 1 186 argsAddDownload('pflotran') 187 argsAddDownload('alquimia') 188 # mstk currently cannot build a shared library 189 argsAddDownload('mstk',[],['--download-mstk-shared=0']) 190 argsAddDownload('ascem-io') 191 argsAddDownload('unittestcpp') 192 193 if downloadxsdk: 194 # Common external libraries 195 argsAddDownload('hdf5') 196 argsAddDownload('netcdf') 197 argsAddDownload('metis') 198 199 argsAddDownload('superlu_dist',['parmetis']) 200 201 argsAddDownload('hypre') 202 203 argsAddDownload('trilinos',['boost'],['--with-cxx-dialect=C++11']) 204 argsAddDownload('xsdktrilinos') 205 206 207def chkwinf90(): 208 for arg in sys.argv: 209 if (arg.find('win32fe') >= 0 and (arg.find('f90') >=0 or arg.find('ifort') >=0)): 210 return 1 211 return 0 212 213def chkdosfiles(): 214 # cygwin - but not a hg clone - so check one of files in bin dir 215 if "\r\n" in open(os.path.join('bin','petscmpiexec'),"rb").read(): 216 print '===============================================================================' 217 print ' *** Scripts are in DOS mode. Was winzip used to extract petsc sources? ****' 218 print ' *** Please restart with a fresh tarball and use "tar -xzf petsc.tar.gz" ****' 219 print '===============================================================================' 220 sys.exit(3) 221 return 222 223def chkcygwinlink(): 224 if os.path.exists('/usr/bin/cygcheck.exe') and os.path.exists('/usr/bin/link.exe') and chkwinf90(): 225 if '--ignore-cygwin-link' in sys.argv: return 0 226 print '===============================================================================' 227 print ' *** Cygwin /usr/bin/link detected! Compiles with CVF/Intel f90 can break! **' 228 print ' *** To workarround do: "mv /usr/bin/link.exe /usr/bin/link-cygwin.exe" **' 229 print ' *** Or to ignore this check, use configure option: --ignore-cygwin-link **' 230 print '===============================================================================' 231 sys.exit(3) 232 return 0 233 234def chkbrokencygwin(): 235 if os.path.exists('/usr/bin/cygcheck.exe'): 236 buf = os.popen('/usr/bin/cygcheck.exe -c cygwin').read() 237 if buf.find('1.5.11-1') > -1: 238 print '===============================================================================' 239 print ' *** cygwin-1.5.11-1 detected. ./configure fails with this version ***' 240 print ' *** Please upgrade to cygwin-1.5.12-1 or newer version. This can ***' 241 print ' *** be done by running cygwin-setup, selecting "next" all the way.***' 242 print '===============================================================================' 243 sys.exit(3) 244 return 0 245 246def chkusingwindowspython(): 247 if sys.platform == 'win32': 248 print '===============================================================================' 249 print ' *** Windows python detected. Please rerun ./configure with cygwin-python. ***' 250 print '===============================================================================' 251 sys.exit(3) 252 return 0 253 254def chkcygwinpython(): 255 if sys.platform == 'cygwin' : 256 import platform 257 import re 258 r=re.compile("([0-9]+).([0-9]+).([0-9]+)") 259 m=r.match(platform.release()) 260 major=int(m.group(1)) 261 minor=int(m.group(2)) 262 subminor=int(m.group(3)) 263 if ((major < 1) or (major == 1 and minor < 7) or (major == 1 and minor == 7 and subminor < 34)): 264 sys.argv.append('--useThreads=0') 265 extraLogs.append('''\ 266=============================================================================== 267** Cygwin version is older than 1.7.34. Python threads do not work correctly. *** 268** Disabling thread usage for this run of ./configure ******* 269===============================================================================''') 270 return 0 271 272def chkrhl9(): 273 if os.path.exists('/etc/redhat-release'): 274 try: 275 file = open('/etc/redhat-release','r') 276 buf = file.read() 277 file.close() 278 except: 279 # can't read file - assume dangerous RHL9 280 buf = 'Shrike' 281 if buf.find('Shrike') > -1: 282 sys.argv.append('--useThreads=0') 283 extraLogs.append('''\ 284============================================================================== 285 *** RHL9 detected. Threads do not work correctly with this distribution *** 286 ****** Disabling thread usage for this run of ./configure ********* 287===============================================================================''') 288 return 0 289 290def check_broken_configure_log_links(): 291 '''Sometime symlinks can get broken if the original files are deleted. Delete such broken links''' 292 import os 293 for logfile in ['configure.log','configure.log.bkp']: 294 if os.path.islink(logfile) and not os.path.isfile(logfile): os.remove(logfile) 295 return 296 297def move_configure_log(framework): 298 '''Move configure.log to PETSC_ARCH/lib/petsc/conf - and update configure.log.bkp in both locations appropriately''' 299 global petsc_arch 300 301 if hasattr(framework,'arch'): petsc_arch = framework.arch 302 if hasattr(framework,'logName'): curr_file = framework.logName 303 else: curr_file = 'configure.log' 304 305 if petsc_arch: 306 import shutil 307 import os 308 309 # Just in case - confdir is not created 310 lib_dir = os.path.join(petsc_arch,'lib') 311 conf_dir = os.path.join(petsc_arch,'lib','petsc','conf') 312 if not os.path.isdir(petsc_arch): os.mkdir(petsc_arch) 313 if not os.path.isdir(lib_dir): os.mkdir(lib_dir) 314 if not os.path.isdir(conf_dir): os.mkdir(conf_dir) 315 316 curr_bkp = curr_file + '.bkp' 317 new_file = os.path.join(conf_dir,curr_file) 318 new_bkp = new_file + '.bkp' 319 320 # Keep backup in $PETSC_ARCH/lib/petsc/conf location 321 if os.path.isfile(new_bkp): os.remove(new_bkp) 322 if os.path.isfile(new_file): os.rename(new_file,new_bkp) 323 if os.path.isfile(curr_file): 324 shutil.copyfile(curr_file,new_file) 325 os.remove(curr_file) 326 if os.path.isfile(new_file): os.symlink(new_file,curr_file) 327 # If the old bkp is using the same PETSC_ARCH/lib/petsc/conf - then update bkp link 328 if os.path.realpath(curr_bkp) == os.path.realpath(new_file): 329 if os.path.isfile(curr_bkp): os.remove(curr_bkp) 330 if os.path.isfile(new_bkp): os.symlink(new_bkp,curr_bkp) 331 return 332 333def print_final_timestamp(framework): 334 import time 335 framework.log.write(('='*80)+'\n') 336 framework.log.write('Finishing Configure Run at '+time.ctime(time.time())+'\n') 337 framework.log.write(('='*80)+'\n') 338 return 339 340def petsc_configure(configure_options): 341 if 'PETSC_DIR' in os.environ: 342 petscdir = os.environ['PETSC_DIR'] 343 if petscdir.find(' ') > -1: 344 raise RuntimeError('Your PETSC_DIR '+petscdir+' has spaces in it; this is not allowed.\n Change the directory with PETSc to not have spaces in it') 345 try: 346 sys.path.append(os.path.join(petscdir,'bin')) 347 import petscnagupgrade 348 file = os.path.join(petscdir,'.nagged') 349 if not petscnagupgrade.naggedtoday(file): 350 petscnagupgrade.currentversion(petscdir) 351 except: 352 pass 353 print '===============================================================================' 354 print ' Configuring PETSc to compile on your system ' 355 print '===============================================================================' 356 357 try: 358 # Command line arguments take precedence (but don't destroy argv[0]) 359 sys.argv = sys.argv[:1] + configure_options + sys.argv[1:] 360 check_for_option_mistakes(sys.argv) 361 check_for_option_changed(sys.argv) 362 except (TypeError, ValueError), e: 363 emsg = str(e) 364 if not emsg.endswith('\n'): emsg = emsg+'\n' 365 msg ='*******************************************************************************\n'\ 366 +' ERROR in COMMAND LINE ARGUMENT to ./configure \n' \ 367 +'-------------------------------------------------------------------------------\n' \ 368 +emsg+'*******************************************************************************\n' 369 sys.exit(msg) 370 # check PETSC_ARCH 371 check_for_unsupported_combinations(sys.argv) 372 check_petsc_arch(sys.argv) 373 check_broken_configure_log_links() 374 375 #rename '--enable-' to '--with-' 376 chkenable() 377 # support a few standard configure option types 378 chksynonyms() 379 # Check for broken cygwin 380 chkbrokencygwin() 381 # Disable threads on RHL9 382 chkrhl9() 383 # Make sure cygwin-python is used on windows 384 chkusingwindowspython() 385 # Threads don't work for cygwin & python... 386 chkcygwinpython() 387 chkcygwinlink() 388 chkdosfiles() 389 390 # Should be run from the toplevel 391 configDir = os.path.abspath('config') 392 bsDir = os.path.join(configDir, 'BuildSystem') 393 if not os.path.isdir(configDir): 394 raise RuntimeError('Run configure from $PETSC_DIR, not '+os.path.abspath('.')) 395 sys.path.insert(0, bsDir) 396 sys.path.insert(0, configDir) 397 import config.base 398 import config.framework 399 import cPickle 400 401 framework = None 402 try: 403 framework = config.framework.Framework(['--configModules=PETSc.Configure','--optionsModule=config.compilerOptions']+sys.argv[1:], loadArgDB = 0) 404 framework.setup() 405 framework.logPrint('\n'.join(extraLogs)) 406 framework.configure(out = sys.stdout) 407 framework.storeSubstitutions(framework.argDB) 408 framework.argDB['configureCache'] = cPickle.dumps(framework) 409 framework.printSummary() 410 framework.argDB.save(force = True) 411 framework.logClear() 412 print_final_timestamp(framework) 413 framework.closeLog() 414 try: 415 move_configure_log(framework) 416 except: 417 # perhaps print an error about unable to shuffle logs? 418 pass 419 return 0 420 except (RuntimeError, config.base.ConfigureSetupError), e: 421 emsg = str(e) 422 if not emsg.endswith('\n'): emsg = emsg+'\n' 423 msg ='*******************************************************************************\n'\ 424 +' UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details):\n' \ 425 +'-------------------------------------------------------------------------------\n' \ 426 +emsg+'*******************************************************************************\n' 427 se = '' 428 except (TypeError, ValueError), e: 429 emsg = str(e) 430 if not emsg.endswith('\n'): emsg = emsg+'\n' 431 msg ='*******************************************************************************\n'\ 432 +' ERROR in COMMAND LINE ARGUMENT to ./configure \n' \ 433 +'-------------------------------------------------------------------------------\n' \ 434 +emsg+'*******************************************************************************\n' 435 se = '' 436 except ImportError, e : 437 emsg = str(e) 438 if not emsg.endswith('\n'): emsg = emsg+'\n' 439 msg ='*******************************************************************************\n'\ 440 +' UNABLE to FIND MODULE for ./configure \n' \ 441 +'-------------------------------------------------------------------------------\n' \ 442 +emsg+'*******************************************************************************\n' 443 se = '' 444 except OSError, e : 445 emsg = str(e) 446 if not emsg.endswith('\n'): emsg = emsg+'\n' 447 msg ='*******************************************************************************\n'\ 448 +' UNABLE to EXECUTE BINARIES for ./configure \n' \ 449 +'-------------------------------------------------------------------------------\n' \ 450 +emsg+'*******************************************************************************\n' 451 se = '' 452 except SystemExit, e: 453 if e.code is None or e.code == 0: 454 return 455 if e.code is 10: 456 sys.exit(10) 457 msg ='*******************************************************************************\n'\ 458 +' CONFIGURATION FAILURE (Please send configure.log to petsc-maint@mcs.anl.gov)\n' \ 459 +'*******************************************************************************\n' 460 se = str(e) 461 except Exception, e: 462 msg ='*******************************************************************************\n'\ 463 +' CONFIGURATION CRASH (Please send configure.log to petsc-maint@mcs.anl.gov)\n' \ 464 +'*******************************************************************************\n' 465 se = str(e) 466 467 print msg 468 if not framework is None: 469 framework.logClear() 470 if hasattr(framework, 'log'): 471 try: 472 if hasattr(framework,'compilerDefines'): 473 framework.log.write('**** Configure header '+framework.compilerDefines+' ****\n') 474 framework.outputHeader(framework.log) 475 if hasattr(framework,'compilerFixes'): 476 framework.log.write('**** C specific Configure header '+framework.compilerFixes+' ****\n') 477 framework.outputCHeader(framework.log) 478 except Exception, e: 479 framework.log.write('Problem writing headers to log: '+str(e)) 480 import traceback 481 try: 482 framework.log.write(msg+se) 483 traceback.print_tb(sys.exc_info()[2], file = framework.log) 484 print_final_timestamp(framework) 485 if hasattr(framework,'log'): framework.log.close() 486 move_configure_log(framework) 487 except: 488 pass 489 sys.exit(1) 490 else: 491 print se 492 import traceback 493 traceback.print_tb(sys.exc_info()[2]) 494 if hasattr(framework,'log'): framework.log.close() 495 496if __name__ == '__main__': 497 petsc_configure([]) 498 499