xref: /petsc/include/petscmat.h (revision bcee047adeeb73090d7e36cc71e39fc287cdbb97)
1 /*
2      Include file for the matrix component of PETSc
3 */
4 #ifndef PETSCMAT_H
5 #define PETSCMAT_H
6 
7 #include <petscvec.h>
8 
9 /* SUBMANSEC = Mat */
10 
11 /*S
12      Mat - Abstract PETSc matrix object used to manage all linear operators in PETSc, even those without
13            an explicit sparse representation (such as matrix-free operators)
14 
15    Level: beginner
16 
17    Note:
18    See [](doc_matrix), [](ch_matrices) and `MatType` for available matrix types
19 
20 .seealso: [](doc_matrix), [](ch_matrices), `MatCreate()`, `MatType`, `MatSetType()`, `MatDestroy()`
21 S*/
22 typedef struct _p_Mat *Mat;
23 
24 /*J
25     MatType - String with the name of a PETSc matrix type
26 
27    Level: beginner
28 
29    Note:
30    [](doc_matrix) for a table of available matrix types
31 
32 .seealso: [](doc_matrix), [](ch_matrices), `MatSetType()`, `Mat`, `MatSolverType`, `MatRegister()`
33 J*/
34 typedef const char *MatType;
35 #define MATSAME                      "same"
36 #define MATMAIJ                      "maij"
37 #define MATSEQMAIJ                   "seqmaij"
38 #define MATMPIMAIJ                   "mpimaij"
39 #define MATKAIJ                      "kaij"
40 #define MATSEQKAIJ                   "seqkaij"
41 #define MATMPIKAIJ                   "mpikaij"
42 #define MATIS                        "is"
43 #define MATAIJ                       "aij"
44 #define MATSEQAIJ                    "seqaij"
45 #define MATMPIAIJ                    "mpiaij"
46 #define MATAIJCRL                    "aijcrl"
47 #define MATSEQAIJCRL                 "seqaijcrl"
48 #define MATMPIAIJCRL                 "mpiaijcrl"
49 #define MATAIJCUSPARSE               "aijcusparse"
50 #define MATSEQAIJCUSPARSE            "seqaijcusparse"
51 #define MATMPIAIJCUSPARSE            "mpiaijcusparse"
52 #define MATAIJHIPSPARSE              "aijhipsparse"
53 #define MATSEQAIJHIPSPARSE           "seqaijhipsparse"
54 #define MATMPIAIJHIPSPARSE           "mpiaijhipsparse"
55 #define MATAIJKOKKOS                 "aijkokkos"
56 #define MATSEQAIJKOKKOS              "seqaijkokkos"
57 #define MATMPIAIJKOKKOS              "mpiaijkokkos"
58 #define MATAIJVIENNACL               "aijviennacl"
59 #define MATSEQAIJVIENNACL            "seqaijviennacl"
60 #define MATMPIAIJVIENNACL            "mpiaijviennacl"
61 #define MATAIJPERM                   "aijperm"
62 #define MATSEQAIJPERM                "seqaijperm"
63 #define MATMPIAIJPERM                "mpiaijperm"
64 #define MATAIJSELL                   "aijsell"
65 #define MATSEQAIJSELL                "seqaijsell"
66 #define MATMPIAIJSELL                "mpiaijsell"
67 #define MATAIJMKL                    "aijmkl"
68 #define MATSEQAIJMKL                 "seqaijmkl"
69 #define MATMPIAIJMKL                 "mpiaijmkl"
70 #define MATBAIJMKL                   "baijmkl"
71 #define MATSEQBAIJMKL                "seqbaijmkl"
72 #define MATMPIBAIJMKL                "mpibaijmkl"
73 #define MATSHELL                     "shell"
74 #define MATCENTERING                 "centering"
75 #define MATDENSE                     "dense"
76 #define MATDENSECUDA                 "densecuda"
77 #define MATDENSEHIP                  "densehip"
78 #define MATSEQDENSE                  "seqdense"
79 #define MATSEQDENSECUDA              "seqdensecuda"
80 #define MATSEQDENSEHIP               "seqdensehip"
81 #define MATMPIDENSE                  "mpidense"
82 #define MATMPIDENSECUDA              "mpidensecuda"
83 #define MATMPIDENSEHIP               "mpidensehip"
84 #define MATELEMENTAL                 "elemental"
85 #define MATSCALAPACK                 "scalapack"
86 #define MATBAIJ                      "baij"
87 #define MATSEQBAIJ                   "seqbaij"
88 #define MATMPIBAIJ                   "mpibaij"
89 #define MATMPIADJ                    "mpiadj"
90 #define MATSBAIJ                     "sbaij"
91 #define MATSEQSBAIJ                  "seqsbaij"
92 #define MATMPISBAIJ                  "mpisbaij"
93 #define MATMFFD                      "mffd"
94 #define MATNORMAL                    "normal"
95 #define MATNORMALHERMITIAN           "normalh"
96 #define MATLRC                       "lrc"
97 #define MATSCATTER                   "scatter"
98 #define MATBLOCKMAT                  "blockmat"
99 #define MATCOMPOSITE                 "composite"
100 #define MATFFT                       "fft"
101 #define MATFFTW                      "fftw"
102 #define MATSEQCUFFT                  "seqcufft"
103 #define MATSEQHIPFFT                 "seqhipfft"
104 #define MATTRANSPOSEMAT              PETSC_DEPRECATED_MACRO("GCC warning \"MATTRANSPOSEMAT macro is deprecated use MATTRANSPOSEVIRTUAL (since version 3.18)\"") "transpose"
105 #define MATTRANSPOSEVIRTUAL          "transpose"
106 #define MATHERMITIANTRANSPOSEVIRTUAL "hermitiantranspose"
107 #define MATSCHURCOMPLEMENT           "schurcomplement"
108 #define MATPYTHON                    "python"
109 #define MATHYPRE                     "hypre"
110 #define MATHYPRESTRUCT               "hyprestruct"
111 #define MATHYPRESSTRUCT              "hypresstruct"
112 #define MATSUBMATRIX                 "submatrix"
113 #define MATLOCALREF                  "localref"
114 #define MATNEST                      "nest"
115 #define MATPREALLOCATOR              "preallocator"
116 #define MATSELL                      "sell"
117 #define MATSEQSELL                   "seqsell"
118 #define MATMPISELL                   "mpisell"
119 #define MATSELLCUDA                  "sellcuda"
120 #define MATSEQSELLCUDA               "seqsellcuda"
121 #define MATMPISELLCUDA               "mpisellcuda"
122 #define MATDUMMY                     "dummy"
123 #define MATLMVM                      "lmvm"
124 #define MATLMVMDFP                   "lmvmdfp"
125 #define MATLMVMBFGS                  "lmvmbfgs"
126 #define MATLMVMSR1                   "lmvmsr1"
127 #define MATLMVMBROYDEN               "lmvmbroyden"
128 #define MATLMVMBADBROYDEN            "lmvmbadbroyden"
129 #define MATLMVMSYMBROYDEN            "lmvmsymbroyden"
130 #define MATLMVMSYMBADBROYDEN         "lmvmsymbadbroyden"
131 #define MATLMVMDIAGBROYDEN           "lmvmdiagbroyden"
132 #define MATCONSTANTDIAGONAL          "constantdiagonal"
133 #define MATDIAGONAL                  "diagonal"
134 #define MATHTOOL                     "htool"
135 #define MATH2OPUS                    "h2opus"
136 
137 /*J
138     MatSolverType - String with the name of a PETSc factorization based matrix solver type.
139 
140     For example: "petsc" indicates what PETSc provides, "superlu_dist" the parallel SuperLU_DIST package etc
141 
142    Level: beginner
143 
144    Note:
145    `MATSOLVERUMFPACK`, `MATSOLVERCHOLMOD`, `MATSOLVERKLU`, `MATSOLVERSPQR` form the SuiteSparse package; you can use `--download-suitesparse` as
146    a ./configure option to install them
147 
148 .seealso: [](sec_matfactor), [](ch_matrices), `MatGetFactor()`, `PCFactorSetMatSolverType()`, `PCFactorGetMatSolverType()`
149 J*/
150 typedef const char *MatSolverType;
151 #define MATSOLVERSUPERLU      "superlu"
152 #define MATSOLVERSUPERLU_DIST "superlu_dist"
153 #define MATSOLVERSTRUMPACK    "strumpack"
154 #define MATSOLVERUMFPACK      "umfpack"
155 #define MATSOLVERCHOLMOD      "cholmod"
156 #define MATSOLVERKLU          "klu"
157 #define MATSOLVERELEMENTAL    "elemental"
158 #define MATSOLVERSCALAPACK    "scalapack"
159 #define MATSOLVERESSL         "essl"
160 #define MATSOLVERLUSOL        "lusol"
161 #define MATSOLVERMUMPS        "mumps"
162 #define MATSOLVERMKL_PARDISO  "mkl_pardiso"
163 #define MATSOLVERMKL_CPARDISO "mkl_cpardiso"
164 #define MATSOLVERPASTIX       "pastix"
165 #define MATSOLVERMATLAB       "matlab"
166 #define MATSOLVERPETSC        "petsc"
167 #define MATSOLVERBAS          "bas"
168 #define MATSOLVERCUSPARSE     "cusparse"
169 #define MATSOLVERCUDA         "cuda"
170 #define MATSOLVERHIPSPARSE    "hipsparse"
171 #define MATSOLVERHIP          "hip"
172 #define MATSOLVERKOKKOS       "kokkos"
173 #define MATSOLVERSPQR         "spqr"
174 
175 /*E
176     MatFactorType - indicates what type of factorization is requested
177 
178     Values:
179 +  `MAT_FACTOR_LU` - LU factorization
180 .  `MAT_FACTOR_CHOLESKY` - Cholesky factorization
181 .  `MAT_FACTOR_ILU` - ILU factorization
182 .  `MAT_FACTOR_ICC` - incomplete Cholesky factorization
183 .  `MAT_FACTOR_ILUDT` - ILU factorization with drop tolerance
184 -  `MAT_FACTOR_QR` - QR factorization
185 
186     Level: beginner
187 
188 .seealso: [](ch_matrices), `MatSolverType`, `MatGetFactor()`, `MatGetFactorAvailable()`, `MatSolverTypeRegister()`
189 E*/
190 typedef enum {
191   MAT_FACTOR_NONE,
192   MAT_FACTOR_LU,
193   MAT_FACTOR_CHOLESKY,
194   MAT_FACTOR_ILU,
195   MAT_FACTOR_ICC,
196   MAT_FACTOR_ILUDT,
197   MAT_FACTOR_QR,
198   MAT_FACTOR_NUM_TYPES
199 } MatFactorType;
200 PETSC_EXTERN const char *const MatFactorTypes[];
201 
202 PETSC_EXTERN PetscErrorCode MatGetFactor(Mat, MatSolverType, MatFactorType, Mat *);
203 PETSC_EXTERN PetscErrorCode MatGetFactorAvailable(Mat, MatSolverType, MatFactorType, PetscBool *);
204 PETSC_EXTERN PetscErrorCode MatFactorGetCanUseOrdering(Mat, PetscBool *);
205 PETSC_DEPRECATED_FUNCTION("Use MatFactorGetCanUseOrdering() (since version 3.15)") static inline PetscErrorCode MatFactorGetUseOrdering(Mat A, PetscBool *b)
206 {
207   return MatFactorGetCanUseOrdering(A, b);
208 }
209 PETSC_EXTERN PetscErrorCode MatFactorGetSolverType(Mat, MatSolverType *);
210 PETSC_EXTERN PetscErrorCode MatGetFactorType(Mat, MatFactorType *);
211 PETSC_EXTERN PetscErrorCode MatSetFactorType(Mat, MatFactorType);
212 PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*MatSolverFunction)(Mat, MatFactorType, Mat *);
213 PETSC_EXTERN PetscErrorCode            MatSolverTypeRegister(MatSolverType, MatType, MatFactorType, MatSolverFunction);
214 PETSC_EXTERN PetscErrorCode            MatSolverTypeGet(MatSolverType, MatType, MatFactorType, PetscBool *, PetscBool *, MatSolverFunction *);
215 typedef MatSolverType MatSolverPackage PETSC_DEPRECATED_TYPEDEF("Use MatSolverType (since version 3.9)");
216 PETSC_DEPRECATED_FUNCTION("Use MatSolverTypeRegister() (since version 3.9)") static inline PetscErrorCode MatSolverPackageRegister(MatSolverType stype, MatType mtype, MatFactorType ftype, MatSolverFunction f)
217 {
218   return MatSolverTypeRegister(stype, mtype, ftype, f);
219 }
220 PETSC_DEPRECATED_FUNCTION("Use MatSolverTypeGet() (since version 3.9)") static inline PetscErrorCode MatSolverPackageGet(MatSolverType stype, MatType mtype, MatFactorType ftype, PetscBool *foundmtype, PetscBool *foundstype, MatSolverFunction *f)
221 {
222   return MatSolverTypeGet(stype, mtype, ftype, foundmtype, foundstype, f);
223 }
224 
225 /*E
226     MatProductType - indicates what type of matrix product is requested
227 
228     Values:
229 +  `MATPRODUCT_AB` - product of two matrices
230 .  `MATPRODUCT_AtB` - product of the transpose of a given matrix with a matrix
231 .  `MATPRODUCT_ABt` - product of a matrix with the transpose of another given matrix
232 .  `MATPRODUCT_PtAP` - the triple product of the transpose of a matrix with another matrix and itself
233 .  `MATPRODUCT_RARt` - the triple product of a matrix, another matrix and the transpose of the first matrix
234 -  `MATPRODUCT_ABC` - the product of three matrices
235 
236     Level: beginner
237 
238 .seealso: [](sec_matmatproduct), [](ch_matrices), `MatProductSetType()`
239 E*/
240 typedef enum {
241   MATPRODUCT_UNSPECIFIED = 0,
242   MATPRODUCT_AB,
243   MATPRODUCT_AtB,
244   MATPRODUCT_ABt,
245   MATPRODUCT_PtAP,
246   MATPRODUCT_RARt,
247   MATPRODUCT_ABC
248 } MatProductType;
249 PETSC_EXTERN const char *const MatProductTypes[];
250 
251 /*J
252     MatProductAlgorithm - String with the name of an algorithm for a PETSc matrix product implementation
253 
254    Level: beginner
255 
256 .seealso: [](sec_matmatproduct), [](ch_matrices), `MatSetType()`, `Mat`, `MatProductSetAlgorithm()`, `MatProductType`
257 J*/
258 typedef const char *MatProductAlgorithm;
259 #define MATPRODUCTALGORITHMDEFAULT         "default"
260 #define MATPRODUCTALGORITHMSORTED          "sorted"
261 #define MATPRODUCTALGORITHMSCALABLE        "scalable"
262 #define MATPRODUCTALGORITHMSCALABLEFAST    "scalable_fast"
263 #define MATPRODUCTALGORITHMHEAP            "heap"
264 #define MATPRODUCTALGORITHMBHEAP           "btheap"
265 #define MATPRODUCTALGORITHMLLCONDENSED     "llcondensed"
266 #define MATPRODUCTALGORITHMROWMERGE        "rowmerge"
267 #define MATPRODUCTALGORITHMOUTERPRODUCT    "outerproduct"
268 #define MATPRODUCTALGORITHMATB             "at*b"
269 #define MATPRODUCTALGORITHMRAP             "rap"
270 #define MATPRODUCTALGORITHMNONSCALABLE     "nonscalable"
271 #define MATPRODUCTALGORITHMSEQMPI          "seqmpi"
272 #define MATPRODUCTALGORITHMBACKEND         "backend"
273 #define MATPRODUCTALGORITHMOVERLAPPING     "overlapping"
274 #define MATPRODUCTALGORITHMMERGED          "merged"
275 #define MATPRODUCTALGORITHMALLATONCE       "allatonce"
276 #define MATPRODUCTALGORITHMALLATONCEMERGED "allatonce_merged"
277 #define MATPRODUCTALGORITHMALLGATHERV      "allgatherv"
278 #define MATPRODUCTALGORITHMCYCLIC          "cyclic"
279 #if defined(PETSC_HAVE_HYPRE)
280   #define MATPRODUCTALGORITHMHYPRE "hypre"
281 #endif
282 
283 PETSC_EXTERN PetscErrorCode MatProductCreate(Mat, Mat, Mat, Mat *);
284 PETSC_EXTERN PetscErrorCode MatProductCreateWithMat(Mat, Mat, Mat, Mat);
285 PETSC_EXTERN PetscErrorCode MatProductSetType(Mat, MatProductType);
286 PETSC_EXTERN PetscErrorCode MatProductSetAlgorithm(Mat, MatProductAlgorithm);
287 PETSC_EXTERN PetscErrorCode MatProductSetFill(Mat, PetscReal);
288 PETSC_EXTERN PetscErrorCode MatProductSetFromOptions(Mat);
289 PETSC_EXTERN PetscErrorCode MatProductSymbolic(Mat);
290 PETSC_EXTERN PetscErrorCode MatProductNumeric(Mat);
291 PETSC_EXTERN PetscErrorCode MatProductReplaceMats(Mat, Mat, Mat, Mat);
292 PETSC_EXTERN PetscErrorCode MatProductClear(Mat);
293 PETSC_EXTERN PetscErrorCode MatProductView(Mat, PetscViewer);
294 PETSC_EXTERN PetscErrorCode MatProductGetType(Mat, MatProductType *);
295 PETSC_EXTERN PetscErrorCode MatProductGetMats(Mat, Mat *, Mat *, Mat *);
296 
297 /* Logging support */
298 #define MAT_FILE_CLASSID 1211216 /* used to indicate matrices in binary files */
299 PETSC_EXTERN PetscClassId MAT_CLASSID;
300 PETSC_EXTERN PetscClassId MAT_COLORING_CLASSID;
301 PETSC_EXTERN PetscClassId MAT_FDCOLORING_CLASSID;
302 PETSC_EXTERN PetscClassId MAT_TRANSPOSECOLORING_CLASSID;
303 PETSC_EXTERN PetscClassId MAT_PARTITIONING_CLASSID;
304 PETSC_EXTERN PetscClassId MAT_COARSEN_CLASSID;
305 PETSC_EXTERN PetscClassId MAT_NULLSPACE_CLASSID;
306 PETSC_EXTERN PetscClassId MATMFFD_CLASSID;
307 
308 /*E
309     MatReuse - Indicates if matrices obtained from a previous call to `MatCreateSubMatrices()`, `MatCreateSubMatrix()`, `MatConvert()` or several other functions
310      are to be reused to store the new matrix values.
311 
312    Values:
313 +  `MAT_INITIAL_MATRIX` - create a new matrix
314 .  `MAT_REUSE_MATRIX` - reuse the matrix created with a previous call that used `MAT_INITIAL_MATRIX`
315 .  `MAT_INPLACE_MATRIX` - replace the first input matrix with the new matrix (not applicable to all functions)
316 -  `MAT_IGNORE_MATRIX` - do not create a new matrix or reuse a give matrix, just ignore that matrix argument (not applicable to all functions)
317 
318     Level: beginner
319 
320 .seealso: [](ch_matrices), `Mat`, `MatCreateSubMatrices()`, `MatCreateSubMatrix()`, `MatDestroyMatrices()`, `MatConvert()`
321 E*/
322 typedef enum {
323   MAT_INITIAL_MATRIX,
324   MAT_REUSE_MATRIX,
325   MAT_IGNORE_MATRIX,
326   MAT_INPLACE_MATRIX
327 } MatReuse;
328 
329 /*E
330     MatCreateSubMatrixOption - Indicates if matrices obtained from a call to `MatCreateSubMatrices()`
331      include the matrix values. Currently it is only used by `MatGetSeqNonzeroStructure()`.
332 
333     Level: developer
334 
335     Values:
336 +  `MAT_DO_NOT_GET_VALUES` - do not copy the matrix values
337 -  `MAT_GET_VALUES` - copy the matrix values
338 
339     Developer Note:
340     Why is not just a boolean used for this information?
341 
342 .seealso: [](ch_matrices), `Mat`, `MatDuplicateOption`, `PetscCopyMode`, `MatGetSeqNonzeroStructure()`
343 E*/
344 typedef enum {
345   MAT_DO_NOT_GET_VALUES,
346   MAT_GET_VALUES
347 } MatCreateSubMatrixOption;
348 
349 PETSC_EXTERN PetscErrorCode MatInitializePackage(void);
350 
351 PETSC_EXTERN PetscErrorCode MatCreate(MPI_Comm, Mat *);
352 PETSC_EXTERN PetscErrorCode MatSetSizes(Mat, PetscInt, PetscInt, PetscInt, PetscInt);
353 PETSC_EXTERN PetscErrorCode MatSetType(Mat, MatType);
354 PETSC_EXTERN PetscErrorCode MatGetVecType(Mat, VecType *);
355 PETSC_EXTERN PetscErrorCode MatSetVecType(Mat, VecType);
356 PETSC_EXTERN PetscErrorCode MatSetFromOptions(Mat);
357 PETSC_EXTERN PetscErrorCode MatViewFromOptions(Mat, PetscObject, const char[]);
358 PETSC_EXTERN PetscErrorCode MatRegister(const char[], PetscErrorCode (*)(Mat));
359 PETSC_EXTERN PetscErrorCode MatRegisterRootName(const char[], const char[], const char[]);
360 PETSC_EXTERN PetscErrorCode MatSetOptionsPrefix(Mat, const char[]);
361 PETSC_EXTERN PetscErrorCode MatSetOptionsPrefixFactor(Mat, const char[]);
362 PETSC_EXTERN PetscErrorCode MatAppendOptionsPrefixFactor(Mat, const char[]);
363 PETSC_EXTERN PetscErrorCode MatAppendOptionsPrefix(Mat, const char[]);
364 PETSC_EXTERN PetscErrorCode MatGetOptionsPrefix(Mat, const char *[]);
365 PETSC_EXTERN PetscErrorCode MatSetErrorIfFailure(Mat, PetscBool);
366 
367 PETSC_EXTERN PetscFunctionList MatList;
368 PETSC_EXTERN PetscFunctionList MatColoringList;
369 PETSC_EXTERN PetscFunctionList MatPartitioningList;
370 
371 /*E
372     MatStructure - Indicates if two matrices have the same nonzero structure
373 
374    Values:
375 +  `SAME_NONZERO_PATTERN`  - the two matrices have identical nonzero patterns
376 .  `DIFFERENT_NONZERO_PATTERN` - the two matrices may have different nonzero patterns
377 .  `SUBSET_NONZERO_PATTERN` - the nonzero pattern of the second matrix is a subset of the nonzero pattern of the first matrix
378 -  `UNKNOWN_NONZERO_PATTERN` - there is no known relationship between the nonzero patterns. In this case the implementations
379                                may try to detect a relationship to optimize the operation
380 
381     Level: beginner
382 
383 .seealso: [](ch_matrices), `Mat`, `MatCopy()`, `MatAXPY()`, `MatAYPX()`
384 E*/
385 typedef enum {
386   DIFFERENT_NONZERO_PATTERN,
387   SUBSET_NONZERO_PATTERN,
388   SAME_NONZERO_PATTERN,
389   UNKNOWN_NONZERO_PATTERN
390 } MatStructure;
391 PETSC_EXTERN const char *const MatStructures[];
392 
393 #if defined                 PETSC_HAVE_MKL_SPARSE
394 PETSC_EXTERN PetscErrorCode MatCreateSeqAIJMKL(MPI_Comm, PetscInt, PetscInt, PetscInt, const PetscInt[], Mat *);
395 PETSC_EXTERN PetscErrorCode MatCreateMPIAIJMKL(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], PetscInt, const PetscInt[], Mat *);
396 PETSC_EXTERN PetscErrorCode MatCreateBAIJMKL(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], PetscInt, const PetscInt[], Mat *);
397 PETSC_EXTERN PetscErrorCode MatCreateSeqBAIJMKL(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], Mat *);
398 #endif
399 
400 PETSC_EXTERN PetscErrorCode MatCreateSeqSELL(MPI_Comm, PetscInt, PetscInt, PetscInt, const PetscInt[], Mat *);
401 PETSC_EXTERN PetscErrorCode MatCreateSELL(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], PetscInt, const PetscInt[], Mat *);
402 PETSC_EXTERN PetscErrorCode MatSeqSELLSetPreallocation(Mat, PetscInt, const PetscInt[]);
403 PETSC_EXTERN PetscErrorCode MatMPISELLSetPreallocation(Mat, PetscInt, const PetscInt[], PetscInt, const PetscInt[]);
404 PETSC_EXTERN PetscErrorCode MatSeqSELLGetFillRatio(Mat, PetscReal *);
405 PETSC_EXTERN PetscErrorCode MatSeqSELLGetMaxSliceWidth(Mat, PetscInt *);
406 PETSC_EXTERN PetscErrorCode MatSeqSELLGetAvgSliceWidth(Mat, PetscReal *);
407 PETSC_EXTERN PetscErrorCode MatSeqSELLSetSliceHeight(Mat, PetscInt);
408 PETSC_EXTERN PetscErrorCode MatSeqSELLGetVarSliceSize(Mat, PetscReal *);
409 
410 PETSC_EXTERN PetscErrorCode MatCreateSeqDense(MPI_Comm, PetscInt, PetscInt, PetscScalar[], Mat *);
411 PETSC_EXTERN PetscErrorCode MatCreateDense(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscScalar[], Mat *);
412 PETSC_EXTERN PetscErrorCode MatCreateSeqAIJ(MPI_Comm, PetscInt, PetscInt, PetscInt, const PetscInt[], Mat *);
413 PETSC_EXTERN PetscErrorCode MatCreateAIJ(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], PetscInt, const PetscInt[], Mat *);
414 PETSC_EXTERN PetscErrorCode MatCreateMPIAIJWithArrays(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], const PetscInt[], const PetscScalar[], Mat *);
415 PETSC_EXTERN PetscErrorCode MatUpdateMPIAIJWithArrays(Mat, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], const PetscInt[], const PetscScalar[]);
416 PETSC_EXTERN PetscErrorCode MatUpdateMPIAIJWithArray(Mat, const PetscScalar[]);
417 PETSC_EXTERN PetscErrorCode MatCreateMPIAIJWithSplitArrays(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt[], PetscInt[], PetscScalar[], PetscInt[], PetscInt[], PetscScalar[], Mat *);
418 PETSC_EXTERN PetscErrorCode MatCreateMPIAIJWithSeqAIJ(MPI_Comm, Mat, Mat, const PetscInt[], Mat *);
419 
420 PETSC_EXTERN PetscErrorCode MatCreateSeqBAIJ(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], Mat *);
421 PETSC_EXTERN PetscErrorCode MatCreateBAIJ(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], PetscInt, const PetscInt[], Mat *);
422 PETSC_EXTERN PetscErrorCode MatCreateMPIBAIJWithArrays(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], const PetscInt[], const PetscScalar[], Mat *);
423 
424 PETSC_EXTERN PetscErrorCode MatSetPreallocationCOO(Mat, PetscCount, PetscInt[], PetscInt[]);
425 PETSC_EXTERN PetscErrorCode MatSetPreallocationCOOLocal(Mat, PetscCount, PetscInt[], PetscInt[]);
426 PETSC_EXTERN PetscErrorCode MatSetValuesCOO(Mat, const PetscScalar[], InsertMode);
427 
428 PETSC_EXTERN PetscErrorCode MatCreateMPIAdj(MPI_Comm, PetscInt, PetscInt, PetscInt[], PetscInt[], PetscInt[], Mat *);
429 PETSC_EXTERN PetscErrorCode MatCreateSeqSBAIJ(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], Mat *);
430 
431 PETSC_EXTERN PetscErrorCode MatCreateSBAIJ(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], PetscInt, const PetscInt[], Mat *);
432 PETSC_EXTERN PetscErrorCode MatCreateMPISBAIJWithArrays(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], const PetscInt[], const PetscScalar[], Mat *);
433 PETSC_EXTERN PetscErrorCode MatSeqSBAIJSetPreallocationCSR(Mat, PetscInt, const PetscInt[], const PetscInt[], const PetscScalar[]);
434 PETSC_EXTERN PetscErrorCode MatMPISBAIJSetPreallocationCSR(Mat, PetscInt, const PetscInt[], const PetscInt[], const PetscScalar[]);
435 PETSC_EXTERN PetscErrorCode MatXAIJSetPreallocation(Mat, PetscInt, const PetscInt[], const PetscInt[], const PetscInt[], const PetscInt[]);
436 
437 PETSC_EXTERN PetscErrorCode MatCreateShell(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, void *, Mat *);
438 PETSC_EXTERN PetscErrorCode MatCreateCentering(MPI_Comm, PetscInt, PetscInt, Mat *);
439 PETSC_EXTERN PetscErrorCode MatCreateNormal(Mat, Mat *);
440 PETSC_EXTERN PetscErrorCode MatCreateNormalHermitian(Mat, Mat *);
441 PETSC_EXTERN PetscErrorCode MatCreateLRC(Mat, Mat, Vec, Mat, Mat *);
442 PETSC_EXTERN PetscErrorCode MatLRCGetMats(Mat, Mat *, Mat *, Vec *, Mat *);
443 PETSC_EXTERN PetscErrorCode MatCreateIS(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, ISLocalToGlobalMapping, ISLocalToGlobalMapping, Mat *);
444 PETSC_EXTERN PetscErrorCode MatCreateSeqAIJCRL(MPI_Comm, PetscInt, PetscInt, PetscInt, const PetscInt[], Mat *);
445 PETSC_EXTERN PetscErrorCode MatCreateMPIAIJCRL(MPI_Comm, PetscInt, PetscInt, PetscInt, const PetscInt[], PetscInt, const PetscInt[], Mat *);
446 
447 PETSC_EXTERN PetscErrorCode MatCreateScatter(MPI_Comm, VecScatter, Mat *);
448 PETSC_EXTERN PetscErrorCode MatScatterSetVecScatter(Mat, VecScatter);
449 PETSC_EXTERN PetscErrorCode MatScatterGetVecScatter(Mat, VecScatter *);
450 PETSC_EXTERN PetscErrorCode MatCreateBlockMat(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt *, Mat *);
451 PETSC_EXTERN PetscErrorCode MatCompositeAddMat(Mat, Mat);
452 PETSC_EXTERN PetscErrorCode MatCompositeMerge(Mat);
453 typedef enum {
454   MAT_COMPOSITE_MERGE_RIGHT,
455   MAT_COMPOSITE_MERGE_LEFT
456 } MatCompositeMergeType;
457 PETSC_EXTERN PetscErrorCode MatCompositeSetMergeType(Mat, MatCompositeMergeType);
458 PETSC_EXTERN PetscErrorCode MatCreateComposite(MPI_Comm, PetscInt, const Mat *, Mat *);
459 typedef enum {
460   MAT_COMPOSITE_ADDITIVE,
461   MAT_COMPOSITE_MULTIPLICATIVE
462 } MatCompositeType;
463 PETSC_EXTERN PetscErrorCode MatCompositeSetType(Mat, MatCompositeType);
464 PETSC_EXTERN PetscErrorCode MatCompositeGetType(Mat, MatCompositeType *);
465 PETSC_EXTERN PetscErrorCode MatCompositeSetMatStructure(Mat, MatStructure);
466 PETSC_EXTERN PetscErrorCode MatCompositeGetMatStructure(Mat, MatStructure *);
467 PETSC_EXTERN PetscErrorCode MatCompositeGetNumberMat(Mat, PetscInt *);
468 PETSC_EXTERN PetscErrorCode MatCompositeGetMat(Mat, PetscInt, Mat *);
469 PETSC_EXTERN PetscErrorCode MatCompositeSetScalings(Mat, const PetscScalar *);
470 
471 PETSC_EXTERN PetscErrorCode MatCreateFFT(MPI_Comm, PetscInt, const PetscInt[], MatType, Mat *);
472 PETSC_EXTERN PetscErrorCode MatCreateSeqCUFFT(MPI_Comm, PetscInt, const PetscInt[], Mat *);
473 
474 PETSC_EXTERN PetscErrorCode MatCreateTranspose(Mat, Mat *);
475 PETSC_EXTERN PetscErrorCode MatTransposeGetMat(Mat, Mat *);
476 PETSC_EXTERN PetscErrorCode MatCreateHermitianTranspose(Mat, Mat *);
477 PETSC_EXTERN PetscErrorCode MatHermitianTransposeGetMat(Mat, Mat *);
478 PETSC_EXTERN PetscErrorCode MatNormalGetMat(Mat, Mat *);
479 PETSC_EXTERN PetscErrorCode MatNormalHermitianGetMat(Mat, Mat *);
480 PETSC_EXTERN PetscErrorCode MatCreateSubMatrixVirtual(Mat, IS, IS, Mat *);
481 PETSC_EXTERN PetscErrorCode MatSubMatrixVirtualUpdate(Mat, Mat, IS, IS);
482 PETSC_EXTERN PetscErrorCode MatCreateLocalRef(Mat, IS, IS, Mat *);
483 PETSC_EXTERN PetscErrorCode MatCreateConstantDiagonal(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscScalar, Mat *);
484 PETSC_EXTERN PetscErrorCode MatCreateDiagonal(Vec, Mat *);
485 PETSC_EXTERN PetscErrorCode MatDiagonalGetDiagonal(Mat, Vec *);
486 PETSC_EXTERN PetscErrorCode MatDiagonalRestoreDiagonal(Mat, Vec *);
487 PETSC_EXTERN PetscErrorCode MatDiagonalGetInverseDiagonal(Mat, Vec *);
488 PETSC_EXTERN PetscErrorCode MatDiagonalRestoreInverseDiagonal(Mat, Vec *);
489 
490 #if defined(PETSC_HAVE_HYPRE)
491 PETSC_EXTERN PetscErrorCode MatHYPRESetPreallocation(Mat, PetscInt, const PetscInt[], PetscInt, const PetscInt[]);
492 #endif
493 
494 PETSC_EXTERN PetscErrorCode MatPythonSetType(Mat, const char[]);
495 PETSC_EXTERN PetscErrorCode MatPythonGetType(Mat, const char *[]);
496 
497 PETSC_EXTERN PetscErrorCode MatResetPreallocation(Mat);
498 PETSC_EXTERN PetscErrorCode MatSetUp(Mat);
499 PETSC_EXTERN PetscErrorCode MatDestroy(Mat *);
500 PETSC_EXTERN PetscErrorCode MatGetNonzeroState(Mat, PetscObjectState *);
501 
502 PETSC_EXTERN PetscErrorCode MatConjugate(Mat);
503 PETSC_EXTERN PetscErrorCode MatRealPart(Mat);
504 PETSC_EXTERN PetscErrorCode MatImaginaryPart(Mat);
505 PETSC_EXTERN PetscErrorCode MatGetDiagonalBlock(Mat, Mat *);
506 PETSC_EXTERN PetscErrorCode MatGetTrace(Mat, PetscScalar *);
507 PETSC_EXTERN PetscErrorCode MatInvertBlockDiagonal(Mat, const PetscScalar **);
508 PETSC_EXTERN PetscErrorCode MatInvertVariableBlockDiagonal(Mat, PetscInt, const PetscInt *, PetscScalar *);
509 PETSC_EXTERN PetscErrorCode MatInvertBlockDiagonalMat(Mat, Mat);
510 PETSC_EXTERN PetscErrorCode MatInvertVariableBlockEnvelope(Mat, MatReuse, Mat *);
511 
512 PETSC_EXTERN PetscErrorCode MatSetValues(Mat, PetscInt, const PetscInt[], PetscInt, const PetscInt[], const PetscScalar[], InsertMode);
513 PETSC_EXTERN PetscErrorCode MatSetValuesIS(Mat, IS, IS, const PetscScalar[], InsertMode);
514 PETSC_EXTERN PetscErrorCode MatSetValuesBlocked(Mat, PetscInt, const PetscInt[], PetscInt, const PetscInt[], const PetscScalar[], InsertMode);
515 PETSC_EXTERN PetscErrorCode MatSetValuesRow(Mat, PetscInt, const PetscScalar[]);
516 PETSC_EXTERN PetscErrorCode MatSetValuesRowLocal(Mat, PetscInt, const PetscScalar[]);
517 PETSC_EXTERN PetscErrorCode MatSetValuesBatch(Mat, PetscInt, PetscInt, PetscInt[], const PetscScalar[]);
518 PETSC_EXTERN PetscErrorCode MatSetRandom(Mat, PetscRandom);
519 
520 /*S
521      MatStencil - Data structure (C struct) for storing information about rows and
522         columns of a matrix as indexed on an associated grid. These are arguments to `MatSetStencil()` and `MatSetBlockStencil()`
523 
524    Level: beginner
525 
526    Notes:
527    The i,j, and k represent the logical coordinates over the entire grid (for 2 and 1 dimensional problems the k and j entries are ignored).
528    The c represents the the degrees of freedom at each grid point (the dof argument to `DMDASetDOF()`). If dof is 1 then this entry is ignored.
529 
530    For stencil access to vectors see `DMDAVecGetArray()`, `DMDAVecGetArrayF90()`.
531 
532    For staggered grids, see `DMStagStencil`
533 
534    Fortran Note:
535    See `MatSetValuesStencil()` for details.
536 
537 .seealso: [](ch_matrices), `Mat`, `MatSetValuesStencil()`, `MatSetStencil()`, `MatSetValuesBlockedStencil()`, `DMDAVecGetArray()`, `DMDAVecGetArrayF90()`,
538           `DMStagStencil`
539 S*/
540 typedef struct {
541   PetscInt k, j, i, c;
542 } MatStencil;
543 
544 PETSC_EXTERN PetscErrorCode MatSetValuesStencil(Mat, PetscInt, const MatStencil[], PetscInt, const MatStencil[], const PetscScalar[], InsertMode);
545 PETSC_EXTERN PetscErrorCode MatSetValuesBlockedStencil(Mat, PetscInt, const MatStencil[], PetscInt, const MatStencil[], const PetscScalar[], InsertMode);
546 PETSC_EXTERN PetscErrorCode MatSetStencil(Mat, PetscInt, const PetscInt[], const PetscInt[], PetscInt);
547 
548 /*E
549     MatAssemblyType - Indicates if the process of setting values into the matrix is complete, and the matrix is ready for use
550 
551     Values:
552 +   `MAT_FLUSH_ASSEMBLY` - you will continue to put values into the matrix
553 -   `MAT_FINAL_ASSEMBLY` - you wish to use the matrix with the values currently inserted
554 
555     Level: beginner
556 
557 .seealso: [](ch_matrices), `Mat`, `MatSetValues`, `MatAssemblyBegin()`, `MatAssemblyEnd()`
558 E*/
559 typedef enum {
560   MAT_FLUSH_ASSEMBLY = 1,
561   MAT_FINAL_ASSEMBLY = 0
562 } MatAssemblyType;
563 PETSC_EXTERN PetscErrorCode MatAssemblyBegin(Mat, MatAssemblyType);
564 PETSC_EXTERN PetscErrorCode MatAssemblyEnd(Mat, MatAssemblyType);
565 PETSC_EXTERN PetscErrorCode MatAssembled(Mat, PetscBool *);
566 
567 /*E
568     MatOption - Options that may be set for a matrix that indicate properties of the matrix or affect its behavior or storage
569 
570     Level: beginner
571 
572    Note:
573    See `MatSetOption()` for the use of the options
574 
575    Developer Note:
576    Entries that are negative need not be called collectively by all processes.
577 
578 .seealso: [](ch_matrices), `Mat`, `MatSetOption()`
579 E*/
580 typedef enum {
581   MAT_OPTION_MIN                  = -3,
582   MAT_UNUSED_NONZERO_LOCATION_ERR = -2,
583   MAT_ROW_ORIENTED                = -1,
584   MAT_SYMMETRIC                   = 1,
585   MAT_STRUCTURALLY_SYMMETRIC      = 2,
586   MAT_FORCE_DIAGONAL_ENTRIES      = 3,
587   MAT_IGNORE_OFF_PROC_ENTRIES     = 4,
588   MAT_USE_HASH_TABLE              = 5,
589   MAT_KEEP_NONZERO_PATTERN        = 6,
590   MAT_IGNORE_ZERO_ENTRIES         = 7,
591   MAT_USE_INODES                  = 8,
592   MAT_HERMITIAN                   = 9,
593   MAT_SYMMETRY_ETERNAL            = 10,
594   MAT_NEW_NONZERO_LOCATION_ERR    = 11,
595   MAT_IGNORE_LOWER_TRIANGULAR     = 12,
596   MAT_ERROR_LOWER_TRIANGULAR      = 13,
597   MAT_GETROW_UPPERTRIANGULAR      = 14,
598   MAT_SPD                         = 15,
599   MAT_NO_OFF_PROC_ZERO_ROWS       = 16,
600   MAT_NO_OFF_PROC_ENTRIES         = 17,
601   MAT_NEW_NONZERO_LOCATIONS       = 18,
602   MAT_NEW_NONZERO_ALLOCATION_ERR  = 19,
603   MAT_SUBSET_OFF_PROC_ENTRIES     = 20,
604   MAT_SUBMAT_SINGLEIS             = 21,
605   MAT_STRUCTURE_ONLY              = 22,
606   MAT_SORTED_FULL                 = 23,
607   MAT_FORM_EXPLICIT_TRANSPOSE     = 24,
608   MAT_STRUCTURAL_SYMMETRY_ETERNAL = 25,
609   MAT_SPD_ETERNAL                 = 26,
610   MAT_OPTION_MAX                  = 27
611 } MatOption;
612 
613 PETSC_EXTERN const char *const *MatOptions;
614 PETSC_EXTERN PetscErrorCode     MatSetOption(Mat, MatOption, PetscBool);
615 PETSC_EXTERN PetscErrorCode     MatGetOption(Mat, MatOption, PetscBool *);
616 PETSC_EXTERN PetscErrorCode     MatPropagateSymmetryOptions(Mat, Mat);
617 PETSC_EXTERN PetscErrorCode     MatGetType(Mat, MatType *);
618 
619 PETSC_EXTERN PetscErrorCode    MatGetValues(Mat, PetscInt, const PetscInt[], PetscInt, const PetscInt[], PetscScalar[]);
620 PETSC_EXTERN PetscErrorCode    MatGetRow(Mat, PetscInt, PetscInt *, const PetscInt *[], const PetscScalar *[]);
621 PETSC_EXTERN PetscErrorCode    MatRestoreRow(Mat, PetscInt, PetscInt *, const PetscInt *[], const PetscScalar *[]);
622 PETSC_EXTERN PetscErrorCode    MatGetRowUpperTriangular(Mat);
623 PETSC_EXTERN PetscErrorCode    MatRestoreRowUpperTriangular(Mat);
624 PETSC_EXTERN PetscErrorCode    MatGetColumnVector(Mat, Vec, PetscInt);
625 PETSC_EXTERN PetscErrorCode    MatSeqAIJGetArray(Mat, PetscScalar *[]);
626 PETSC_EXTERN PetscErrorCode    MatSeqAIJGetArrayRead(Mat, const PetscScalar *[]);
627 PETSC_EXTERN PetscErrorCode    MatSeqAIJGetArrayWrite(Mat, PetscScalar *[]);
628 PETSC_EXTERN PetscErrorCode    MatSeqAIJRestoreArray(Mat, PetscScalar *[]);
629 PETSC_EXTERN PetscErrorCode    MatSeqAIJRestoreArrayRead(Mat, const PetscScalar *[]);
630 PETSC_EXTERN PetscErrorCode    MatSeqAIJRestoreArrayWrite(Mat, PetscScalar *[]);
631 PETSC_EXTERN PetscErrorCode    MatSeqAIJGetMaxRowNonzeros(Mat, PetscInt *);
632 PETSC_EXTERN PetscErrorCode    MatSeqAIJSetValuesLocalFast(Mat, PetscInt, const PetscInt[], PetscInt, const PetscInt[], const PetscScalar[], InsertMode);
633 PETSC_EXTERN PetscErrorCode    MatSeqAIJSetType(Mat, MatType);
634 PETSC_EXTERN PetscErrorCode    MatSeqAIJKron(Mat, Mat, MatReuse, Mat *);
635 PETSC_EXTERN PetscErrorCode    MatSeqAIJRegister(const char[], PetscErrorCode (*)(Mat, MatType, MatReuse, Mat *));
636 PETSC_EXTERN PetscFunctionList MatSeqAIJList;
637 PETSC_EXTERN PetscErrorCode    MatSeqBAIJGetArray(Mat, PetscScalar *[]);
638 PETSC_EXTERN PetscErrorCode    MatSeqBAIJRestoreArray(Mat, PetscScalar *[]);
639 PETSC_EXTERN PetscErrorCode    MatSeqSBAIJGetArray(Mat, PetscScalar *[]);
640 PETSC_EXTERN PetscErrorCode    MatSeqSBAIJRestoreArray(Mat, PetscScalar *[]);
641 PETSC_EXTERN PetscErrorCode    MatDenseGetArray(Mat, PetscScalar *[]);
642 PETSC_EXTERN PetscErrorCode    MatDenseRestoreArray(Mat, PetscScalar *[]);
643 PETSC_EXTERN PetscErrorCode    MatDensePlaceArray(Mat, const PetscScalar[]);
644 PETSC_EXTERN PetscErrorCode    MatDenseReplaceArray(Mat, const PetscScalar[]);
645 PETSC_EXTERN PetscErrorCode    MatDenseResetArray(Mat);
646 PETSC_EXTERN PetscErrorCode    MatDenseGetArrayRead(Mat, const PetscScalar *[]);
647 PETSC_EXTERN PetscErrorCode    MatDenseRestoreArrayRead(Mat, const PetscScalar *[]);
648 PETSC_EXTERN PetscErrorCode    MatDenseGetArrayWrite(Mat, PetscScalar *[]);
649 PETSC_EXTERN PetscErrorCode    MatDenseRestoreArrayWrite(Mat, PetscScalar *[]);
650 PETSC_EXTERN PetscErrorCode    MatDenseGetArrayAndMemType(Mat, PetscScalar *[], PetscMemType *);
651 PETSC_EXTERN PetscErrorCode    MatDenseRestoreArrayAndMemType(Mat, PetscScalar *[]);
652 PETSC_EXTERN PetscErrorCode    MatDenseGetArrayReadAndMemType(Mat, const PetscScalar *[], PetscMemType *);
653 PETSC_EXTERN PetscErrorCode    MatDenseRestoreArrayReadAndMemType(Mat, const PetscScalar *[]);
654 PETSC_EXTERN PetscErrorCode    MatDenseGetArrayWriteAndMemType(Mat, PetscScalar *[], PetscMemType *);
655 PETSC_EXTERN PetscErrorCode    MatDenseRestoreArrayWriteAndMemType(Mat, PetscScalar *[]);
656 PETSC_EXTERN PetscErrorCode    MatGetBlockSize(Mat, PetscInt *);
657 PETSC_EXTERN PetscErrorCode    MatSetBlockSize(Mat, PetscInt);
658 PETSC_EXTERN PetscErrorCode    MatGetBlockSizes(Mat, PetscInt *, PetscInt *);
659 PETSC_EXTERN PetscErrorCode    MatSetBlockSizes(Mat, PetscInt, PetscInt);
660 PETSC_EXTERN PetscErrorCode    MatSetBlockSizesFromMats(Mat, Mat, Mat);
661 PETSC_EXTERN PetscErrorCode    MatSetVariableBlockSizes(Mat, PetscInt, PetscInt *);
662 PETSC_EXTERN PetscErrorCode    MatGetVariableBlockSizes(Mat, PetscInt *, const PetscInt **);
663 
664 PETSC_EXTERN PetscErrorCode MatDenseGetColumn(Mat, PetscInt, PetscScalar *[]);
665 PETSC_EXTERN PetscErrorCode MatDenseRestoreColumn(Mat, PetscScalar *[]);
666 PETSC_EXTERN PetscErrorCode MatDenseGetColumnVec(Mat, PetscInt, Vec *);
667 PETSC_EXTERN PetscErrorCode MatDenseRestoreColumnVec(Mat, PetscInt, Vec *);
668 PETSC_EXTERN PetscErrorCode MatDenseGetColumnVecRead(Mat, PetscInt, Vec *);
669 PETSC_EXTERN PetscErrorCode MatDenseRestoreColumnVecRead(Mat, PetscInt, Vec *);
670 PETSC_EXTERN PetscErrorCode MatDenseGetColumnVecWrite(Mat, PetscInt, Vec *);
671 PETSC_EXTERN PetscErrorCode MatDenseRestoreColumnVecWrite(Mat, PetscInt, Vec *);
672 PETSC_EXTERN PetscErrorCode MatDenseGetSubMatrix(Mat, PetscInt, PetscInt, PetscInt, PetscInt, Mat *);
673 PETSC_EXTERN PetscErrorCode MatDenseRestoreSubMatrix(Mat, Mat *);
674 
675 PETSC_EXTERN PetscErrorCode MatMult(Mat, Vec, Vec);
676 PETSC_EXTERN PetscErrorCode MatMultDiagonalBlock(Mat, Vec, Vec);
677 PETSC_EXTERN PetscErrorCode MatMultAdd(Mat, Vec, Vec, Vec);
678 PETSC_EXTERN PetscErrorCode MatMultTranspose(Mat, Vec, Vec);
679 PETSC_EXTERN PetscErrorCode MatMultHermitianTranspose(Mat, Vec, Vec);
680 PETSC_EXTERN PetscErrorCode MatIsTranspose(Mat, Mat, PetscReal, PetscBool *);
681 PETSC_EXTERN PetscErrorCode MatIsHermitianTranspose(Mat, Mat, PetscReal, PetscBool *);
682 PETSC_EXTERN PetscErrorCode MatMultTransposeAdd(Mat, Vec, Vec, Vec);
683 PETSC_EXTERN PetscErrorCode MatMultHermitianTransposeAdd(Mat, Vec, Vec, Vec);
684 PETSC_EXTERN PetscErrorCode MatMatSolve(Mat, Mat, Mat);
685 PETSC_EXTERN PetscErrorCode MatMatSolveTranspose(Mat, Mat, Mat);
686 PETSC_EXTERN PetscErrorCode MatMatTransposeSolve(Mat, Mat, Mat);
687 PETSC_EXTERN PetscErrorCode MatResidual(Mat, Vec, Vec, Vec);
688 
689 /*E
690     MatDuplicateOption - Indicates if a duplicated sparse matrix should have
691   its numerical values copied over or just its nonzero structure.
692 
693     Values:
694 +   `MAT_DO_NOT_COPY_VALUES`    - Create a matrix using the same nonzero pattern as the original matrix,
695                                with zeros for the numerical values
696 .   `MAT_COPY_VALUES`           - Create a matrix with the same nonzero pattern as the original matrix
697                                and with the same numerical values.
698 -   `MAT_SHARE_NONZERO_PATTERN` - Create a matrix that shares the nonzero structure with the previous matrix
699                                and does not copy it, using zeros for the numerical values. The parent and
700                                child matrices will share their index (i and j) arrays, and you cannot
701                                insert new nonzero entries into either matrix
702 
703     Level: beginner
704 
705   Note:
706   Many matrix types (including `MATSEQAIJ`) do not support the `MAT_SHARE_NONZERO_PATTERN` optimization; in
707   this case the behavior is as if `MAT_DO_NOT_COPY_VALUES` has been specified.
708 
709 .seealso: [](ch_matrices), `Mat`, `MatDuplicate()`
710 E*/
711 typedef enum {
712   MAT_DO_NOT_COPY_VALUES,
713   MAT_COPY_VALUES,
714   MAT_SHARE_NONZERO_PATTERN
715 } MatDuplicateOption;
716 
717 PETSC_EXTERN PetscErrorCode MatConvert(Mat, MatType, MatReuse, Mat *);
718 PETSC_EXTERN PetscErrorCode MatDuplicate(Mat, MatDuplicateOption, Mat *);
719 
720 PETSC_EXTERN PetscErrorCode MatCopy(Mat, Mat, MatStructure);
721 PETSC_EXTERN PetscErrorCode MatView(Mat, PetscViewer);
722 PETSC_EXTERN PetscErrorCode MatIsSymmetric(Mat, PetscReal, PetscBool *);
723 PETSC_EXTERN PetscErrorCode MatIsStructurallySymmetric(Mat, PetscBool *);
724 PETSC_EXTERN PetscErrorCode MatIsHermitian(Mat, PetscReal, PetscBool *);
725 PETSC_EXTERN PetscErrorCode MatIsSymmetricKnown(Mat, PetscBool *, PetscBool *);
726 PETSC_EXTERN PetscErrorCode MatIsHermitianKnown(Mat, PetscBool *, PetscBool *);
727 PETSC_EXTERN PetscErrorCode MatIsStructurallySymmetricKnown(Mat, PetscBool *, PetscBool *);
728 PETSC_EXTERN PetscErrorCode MatIsSPDKnown(Mat, PetscBool *, PetscBool *);
729 PETSC_EXTERN PetscErrorCode MatMissingDiagonal(Mat, PetscBool *, PetscInt *);
730 PETSC_EXTERN PetscErrorCode MatLoad(Mat, PetscViewer);
731 
732 PETSC_EXTERN PetscErrorCode MatGetRowIJ(Mat, PetscInt, PetscBool, PetscBool, PetscInt *, const PetscInt *[], const PetscInt *[], PetscBool *);
733 PETSC_EXTERN PetscErrorCode MatRestoreRowIJ(Mat, PetscInt, PetscBool, PetscBool, PetscInt *, const PetscInt *[], const PetscInt *[], PetscBool *);
734 PETSC_EXTERN PetscErrorCode MatGetColumnIJ(Mat, PetscInt, PetscBool, PetscBool, PetscInt *, const PetscInt *[], const PetscInt *[], PetscBool *);
735 PETSC_EXTERN PetscErrorCode MatRestoreColumnIJ(Mat, PetscInt, PetscBool, PetscBool, PetscInt *, const PetscInt *[], const PetscInt *[], PetscBool *);
736 
737 /*S
738      MatInfo - Context of matrix information, used with `MatGetInfo()`
739 
740    Level: intermediate
741 
742    Fortran Note:
743    Information is stored as a double-precision array of dimension `MAT_INFO_SIZE`
744 
745 .seealso: [](ch_matrices), `Mat`, `MatGetInfo()`, `MatInfoType`
746 S*/
747 typedef struct {
748   PetscLogDouble block_size;                          /* block size */
749   PetscLogDouble nz_allocated, nz_used, nz_unneeded;  /* number of nonzeros */
750   PetscLogDouble memory;                              /* memory allocated */
751   PetscLogDouble assemblies;                          /* number of matrix assemblies called */
752   PetscLogDouble mallocs;                             /* number of mallocs during MatSetValues() */
753   PetscLogDouble fill_ratio_given, fill_ratio_needed; /* fill ratio for LU/ILU */
754   PetscLogDouble factor_mallocs;                      /* number of mallocs during factorization */
755 } MatInfo;
756 
757 /*E
758     MatInfoType - Indicates if you want information about the local part of the matrix,
759      the entire parallel matrix or the maximum over all the local parts.
760 
761     Values:
762 +   `MAT_LOCAL` - values for each MPI process part of the matrix
763 .   `MAT_GLOBAL_MAX` - maximum of each value over all MPI processes
764 -   `MAT_GLOBAL_SUM` - sum of each value over all MPI processes
765 
766     Level: beginner
767 
768 .seealso: [](ch_matrices), `MatGetInfo()`, `MatInfo`
769 E*/
770 typedef enum {
771   MAT_LOCAL      = 1,
772   MAT_GLOBAL_MAX = 2,
773   MAT_GLOBAL_SUM = 3
774 } MatInfoType;
775 PETSC_EXTERN PetscErrorCode MatGetInfo(Mat, MatInfoType, MatInfo *);
776 PETSC_EXTERN PetscErrorCode MatGetDiagonal(Mat, Vec);
777 PETSC_EXTERN PetscErrorCode MatGetRowMax(Mat, Vec, PetscInt[]);
778 PETSC_EXTERN PetscErrorCode MatGetRowMin(Mat, Vec, PetscInt[]);
779 PETSC_EXTERN PetscErrorCode MatGetRowMaxAbs(Mat, Vec, PetscInt[]);
780 PETSC_EXTERN PetscErrorCode MatGetRowMinAbs(Mat, Vec, PetscInt[]);
781 PETSC_EXTERN PetscErrorCode MatGetRowSum(Mat, Vec);
782 PETSC_EXTERN PetscErrorCode MatTranspose(Mat, MatReuse, Mat *);
783 PETSC_EXTERN PetscErrorCode MatTransposeSymbolic(Mat, Mat *);
784 PETSC_EXTERN PetscErrorCode MatTransposeSetPrecursor(Mat, Mat);
785 PETSC_EXTERN PetscErrorCode MatHermitianTranspose(Mat, MatReuse, Mat *);
786 PETSC_EXTERN PetscErrorCode MatPermute(Mat, IS, IS, Mat *);
787 PETSC_EXTERN PetscErrorCode MatDiagonalScale(Mat, Vec, Vec);
788 PETSC_EXTERN PetscErrorCode MatDiagonalSet(Mat, Vec, InsertMode);
789 
790 PETSC_EXTERN PetscErrorCode MatEqual(Mat, Mat, PetscBool *);
791 PETSC_EXTERN PetscErrorCode MatMultEqual(Mat, Mat, PetscInt, PetscBool *);
792 PETSC_EXTERN PetscErrorCode MatMultAddEqual(Mat, Mat, PetscInt, PetscBool *);
793 PETSC_EXTERN PetscErrorCode MatMultTransposeEqual(Mat, Mat, PetscInt, PetscBool *);
794 PETSC_EXTERN PetscErrorCode MatMultTransposeAddEqual(Mat, Mat, PetscInt, PetscBool *);
795 PETSC_EXTERN PetscErrorCode MatMultHermitianTransposeEqual(Mat, Mat, PetscInt, PetscBool *);
796 PETSC_EXTERN PetscErrorCode MatMultHermitianTransposeAddEqual(Mat, Mat, PetscInt, PetscBool *);
797 PETSC_EXTERN PetscErrorCode MatMatMultEqual(Mat, Mat, Mat, PetscInt, PetscBool *);
798 PETSC_EXTERN PetscErrorCode MatTransposeMatMultEqual(Mat, Mat, Mat, PetscInt, PetscBool *);
799 PETSC_EXTERN PetscErrorCode MatMatTransposeMultEqual(Mat, Mat, Mat, PetscInt, PetscBool *);
800 PETSC_EXTERN PetscErrorCode MatPtAPMultEqual(Mat, Mat, Mat, PetscInt, PetscBool *);
801 PETSC_EXTERN PetscErrorCode MatRARtMultEqual(Mat, Mat, Mat, PetscInt, PetscBool *);
802 PETSC_EXTERN PetscErrorCode MatIsLinear(Mat, PetscInt, PetscBool *);
803 
804 PETSC_EXTERN PetscErrorCode MatNorm(Mat, NormType, PetscReal *);
805 PETSC_EXTERN PetscErrorCode MatGetColumnNorms(Mat, NormType, PetscReal *);
806 PETSC_EXTERN PetscErrorCode MatGetColumnSums(Mat, PetscScalar *);
807 PETSC_EXTERN PetscErrorCode MatGetColumnSumsRealPart(Mat, PetscReal *);
808 PETSC_EXTERN PetscErrorCode MatGetColumnSumsImaginaryPart(Mat, PetscReal *);
809 PETSC_EXTERN PetscErrorCode MatGetColumnMeans(Mat, PetscScalar *);
810 PETSC_EXTERN PetscErrorCode MatGetColumnMeansRealPart(Mat, PetscReal *);
811 PETSC_EXTERN PetscErrorCode MatGetColumnMeansImaginaryPart(Mat, PetscReal *);
812 PETSC_EXTERN PetscErrorCode MatGetColumnReductions(Mat, PetscInt, PetscReal *);
813 PETSC_EXTERN PetscErrorCode MatZeroEntries(Mat);
814 PETSC_EXTERN PetscErrorCode MatSetInf(Mat);
815 PETSC_EXTERN PetscErrorCode MatZeroRows(Mat, PetscInt, const PetscInt[], PetscScalar, Vec, Vec);
816 PETSC_EXTERN PetscErrorCode MatZeroRowsIS(Mat, IS, PetscScalar, Vec, Vec);
817 PETSC_EXTERN PetscErrorCode MatZeroRowsStencil(Mat, PetscInt, const MatStencil[], PetscScalar, Vec, Vec);
818 PETSC_EXTERN PetscErrorCode MatZeroRowsColumnsStencil(Mat, PetscInt, const MatStencil[], PetscScalar, Vec, Vec);
819 PETSC_EXTERN PetscErrorCode MatZeroRowsColumns(Mat, PetscInt, const PetscInt[], PetscScalar, Vec, Vec);
820 PETSC_EXTERN PetscErrorCode MatZeroRowsColumnsIS(Mat, IS, PetscScalar, Vec, Vec);
821 
822 PETSC_EXTERN PetscErrorCode MatGetSize(Mat, PetscInt *, PetscInt *);
823 PETSC_EXTERN PetscErrorCode MatGetLocalSize(Mat, PetscInt *, PetscInt *);
824 PETSC_EXTERN PetscErrorCode MatGetOwnershipRange(Mat, PetscInt *, PetscInt *);
825 PETSC_EXTERN PetscErrorCode MatGetOwnershipRanges(Mat, const PetscInt **);
826 PETSC_EXTERN PetscErrorCode MatGetOwnershipRangeColumn(Mat, PetscInt *, PetscInt *);
827 PETSC_EXTERN PetscErrorCode MatGetOwnershipRangesColumn(Mat, const PetscInt **);
828 PETSC_EXTERN PetscErrorCode MatGetOwnershipIS(Mat, IS *, IS *);
829 
830 PETSC_EXTERN PetscErrorCode MatCreateSubMatrices(Mat, PetscInt, const IS[], const IS[], MatReuse, Mat *[]);
831 PETSC_DEPRECATED_FUNCTION("Use MatCreateSubMatrices() (since version 3.8)") static inline PetscErrorCode MatGetSubMatrices(Mat mat, PetscInt n, const IS irow[], const IS icol[], MatReuse scall, Mat *submat[])
832 {
833   return MatCreateSubMatrices(mat, n, irow, icol, scall, submat);
834 }
835 PETSC_EXTERN PetscErrorCode MatCreateSubMatricesMPI(Mat, PetscInt, const IS[], const IS[], MatReuse, Mat *[]);
836 PETSC_DEPRECATED_FUNCTION("Use MatCreateSubMatricesMPI() (since version 3.8)") static inline PetscErrorCode MatGetSubMatricesMPI(Mat mat, PetscInt n, const IS irow[], const IS icol[], MatReuse scall, Mat *submat[])
837 {
838   return MatCreateSubMatricesMPI(mat, n, irow, icol, scall, submat);
839 }
840 PETSC_EXTERN PetscErrorCode MatDestroyMatrices(PetscInt, Mat *[]);
841 PETSC_EXTERN PetscErrorCode MatDestroySubMatrices(PetscInt, Mat *[]);
842 PETSC_EXTERN PetscErrorCode MatCreateSubMatrix(Mat, IS, IS, MatReuse, Mat *);
843 PETSC_DEPRECATED_FUNCTION("Use MatCreateSubMatrix() (since version 3.8)") static inline PetscErrorCode MatGetSubMatrix(Mat mat, IS isrow, IS iscol, MatReuse cll, Mat *newmat)
844 {
845   return MatCreateSubMatrix(mat, isrow, iscol, cll, newmat);
846 }
847 PETSC_EXTERN PetscErrorCode MatGetLocalSubMatrix(Mat, IS, IS, Mat *);
848 PETSC_EXTERN PetscErrorCode MatRestoreLocalSubMatrix(Mat, IS, IS, Mat *);
849 PETSC_EXTERN PetscErrorCode MatGetSeqNonzeroStructure(Mat, Mat *);
850 PETSC_EXTERN PetscErrorCode MatDestroySeqNonzeroStructure(Mat *);
851 
852 PETSC_EXTERN PetscErrorCode MatCreateMPIAIJSumSeqAIJ(MPI_Comm, Mat, PetscInt, PetscInt, MatReuse, Mat *);
853 PETSC_EXTERN PetscErrorCode MatCreateMPIAIJSumSeqAIJSymbolic(MPI_Comm, Mat, PetscInt, PetscInt, Mat *);
854 PETSC_EXTERN PetscErrorCode MatCreateMPIAIJSumSeqAIJNumeric(Mat, Mat);
855 PETSC_EXTERN PetscErrorCode MatMPIAIJGetLocalMat(Mat, MatReuse, Mat *);
856 PETSC_EXTERN PetscErrorCode MatAIJGetLocalMat(Mat, Mat *);
857 PETSC_EXTERN PetscErrorCode MatMPIAIJGetLocalMatCondensed(Mat, MatReuse, IS *, IS *, Mat *);
858 PETSC_EXTERN PetscErrorCode MatMPIAIJGetLocalMatMerge(Mat, MatReuse, IS *, Mat *);
859 PETSC_EXTERN PetscErrorCode MatMPIAIJGetNumberNonzeros(Mat, PetscCount *);
860 PETSC_EXTERN PetscErrorCode MatGetBrowsOfAcols(Mat, Mat, MatReuse, IS *, IS *, Mat *);
861 PETSC_EXTERN PetscErrorCode MatGetGhosts(Mat, PetscInt *, const PetscInt *[]);
862 
863 PETSC_EXTERN PetscErrorCode MatIncreaseOverlap(Mat, PetscInt, IS[], PetscInt);
864 PETSC_EXTERN PetscErrorCode MatIncreaseOverlapSplit(Mat mat, PetscInt n, IS is[], PetscInt ov);
865 PETSC_EXTERN PetscErrorCode MatMPIAIJSetUseScalableIncreaseOverlap(Mat, PetscBool);
866 
867 PETSC_EXTERN PetscErrorCode MatMatMult(Mat, Mat, MatReuse, PetscReal, Mat *);
868 
869 PETSC_EXTERN PetscErrorCode MatMatMatMult(Mat, Mat, Mat, MatReuse, PetscReal, Mat *);
870 PETSC_EXTERN PetscErrorCode MatGalerkin(Mat, Mat, Mat, MatReuse, PetscReal, Mat *);
871 
872 PETSC_EXTERN PetscErrorCode MatPtAP(Mat, Mat, MatReuse, PetscReal, Mat *);
873 PETSC_EXTERN PetscErrorCode MatRARt(Mat, Mat, MatReuse, PetscReal, Mat *);
874 
875 PETSC_EXTERN PetscErrorCode MatTransposeMatMult(Mat, Mat, MatReuse, PetscReal, Mat *);
876 PETSC_EXTERN PetscErrorCode MatMatTransposeMult(Mat, Mat, MatReuse, PetscReal, Mat *);
877 
878 PETSC_EXTERN PetscErrorCode MatAXPY(Mat, PetscScalar, Mat, MatStructure);
879 PETSC_EXTERN PetscErrorCode MatAYPX(Mat, PetscScalar, Mat, MatStructure);
880 
881 PETSC_EXTERN PetscErrorCode MatScale(Mat, PetscScalar);
882 PETSC_EXTERN PetscErrorCode MatShift(Mat, PetscScalar);
883 
884 PETSC_EXTERN PetscErrorCode MatSetLocalToGlobalMapping(Mat, ISLocalToGlobalMapping, ISLocalToGlobalMapping);
885 PETSC_EXTERN PetscErrorCode MatGetLocalToGlobalMapping(Mat, ISLocalToGlobalMapping *, ISLocalToGlobalMapping *);
886 PETSC_EXTERN PetscErrorCode MatGetLayouts(Mat, PetscLayout *, PetscLayout *);
887 PETSC_EXTERN PetscErrorCode MatSetLayouts(Mat, PetscLayout, PetscLayout);
888 PETSC_EXTERN PetscErrorCode MatZeroRowsLocal(Mat, PetscInt, const PetscInt[], PetscScalar, Vec, Vec);
889 PETSC_EXTERN PetscErrorCode MatZeroRowsLocalIS(Mat, IS, PetscScalar, Vec, Vec);
890 PETSC_EXTERN PetscErrorCode MatZeroRowsColumnsLocal(Mat, PetscInt, const PetscInt[], PetscScalar, Vec, Vec);
891 PETSC_EXTERN PetscErrorCode MatZeroRowsColumnsLocalIS(Mat, IS, PetscScalar, Vec, Vec);
892 PETSC_EXTERN PetscErrorCode MatGetValuesLocal(Mat, PetscInt, const PetscInt[], PetscInt, const PetscInt[], PetscScalar[]);
893 PETSC_EXTERN PetscErrorCode MatSetValuesLocal(Mat, PetscInt, const PetscInt[], PetscInt, const PetscInt[], const PetscScalar[], InsertMode);
894 PETSC_EXTERN PetscErrorCode MatSetValuesBlockedLocal(Mat, PetscInt, const PetscInt[], PetscInt, const PetscInt[], const PetscScalar[], InsertMode);
895 
896 PETSC_EXTERN PetscErrorCode MatStashSetInitialSize(Mat, PetscInt, PetscInt);
897 PETSC_EXTERN PetscErrorCode MatStashGetInfo(Mat, PetscInt *, PetscInt *, PetscInt *, PetscInt *);
898 
899 PETSC_EXTERN PetscErrorCode MatInterpolate(Mat, Vec, Vec);
900 PETSC_EXTERN PetscErrorCode MatInterpolateAdd(Mat, Vec, Vec, Vec);
901 PETSC_EXTERN PetscErrorCode MatRestrict(Mat, Vec, Vec);
902 PETSC_EXTERN PetscErrorCode MatMatInterpolate(Mat, Mat, Mat *);
903 PETSC_EXTERN PetscErrorCode MatMatInterpolateAdd(Mat, Mat, Mat, Mat *);
904 PETSC_EXTERN PetscErrorCode MatMatRestrict(Mat, Mat, Mat *);
905 PETSC_EXTERN PetscErrorCode MatCreateVecs(Mat, Vec *, Vec *);
906 PETSC_DEPRECATED_FUNCTION("Use MatCreateVecs() (since version 3.6)") static inline PetscErrorCode MatGetVecs(Mat mat, Vec *x, Vec *y)
907 {
908   return MatCreateVecs(mat, x, y);
909 }
910 PETSC_EXTERN PetscErrorCode MatCreateRedundantMatrix(Mat, PetscInt, MPI_Comm, MatReuse, Mat *);
911 PETSC_EXTERN PetscErrorCode MatGetMultiProcBlock(Mat, MPI_Comm, MatReuse, Mat *);
912 PETSC_EXTERN PetscErrorCode MatFindZeroDiagonals(Mat, IS *);
913 PETSC_EXTERN PetscErrorCode MatFindOffBlockDiagonalEntries(Mat, IS *);
914 PETSC_EXTERN PetscErrorCode MatCreateMPIMatConcatenateSeqMat(MPI_Comm, Mat, PetscInt, MatReuse, Mat *);
915 
916 /*MC
917    MatSetValue - Set a single entry into a matrix.
918 
919    This value may be cached, so `MatAssemblyBegin()` and `MatAssemblyEnd()`
920    MUST be called after all calls to `MatSetValue()` have been completed.
921 
922    Synopsis:
923      #include <petscmat.h>
924      PetscErrorCode MatSetValue(Mat m,PetscInt i,PetscInt j,PetscScalar va,InsertMode mode)
925 
926    Not Collective
927 
928    Input Parameters:
929 +  m - the matrix
930 .  i - the row location of the entry
931 .  j - the column location of the entry
932 .  va - the value to insert
933 -  mode - either `INSERT_VALUES` or `ADD_VALUES`
934 
935    Level: beginner
936 
937    Note:
938    For efficiency one should use `MatSetValues()` and set several values simultaneously.
939 
940 .seealso: [](ch_matrices), `Mat`, `MatAssemblyBegin()`, `MatAssemblyEnd`, `InsertMode`, `MatGetValue()`, `MatSetValues()`,
941           `MatSetValueLocal()`, `MatSetValuesLocal()`
942 M*/
943 static inline PetscErrorCode MatSetValue(Mat m, PetscInt i, PetscInt j, PetscScalar va, InsertMode mode)
944 {
945   return MatSetValues(m, 1, &i, 1, &j, &va, mode);
946 }
947 
948 /*@C
949    MatGetValue - Gets a single value from a matrix
950 
951    Not Collective; can only return a value owned by the given process
952 
953    Input Parameters:
954 +  mat - the matrix
955 .  row - the row location of the entry
956 -  col - the column location of the entry
957 
958    Output Parameter:
959 .  va - the value
960 
961    Level: advanced
962 
963    Notes:
964    The matrix must have been assembled with `MatAssemblyBegin()` and `MatAssemblyEnd` before this call
965 
966    For efficiency one should use `MatGetValues()` and get several values simultaneously.
967 
968    See notes for `MatGetValues()`.
969 
970 .seealso: [](ch_matrices), `Mat`, `MatAssemblyBegin()`, `MatAssemblyEnd`, `MatSetValue()`, `MatGetValueLocal()`, `MatGetValues()`
971 @*/
972 static inline PetscErrorCode MatGetValue(Mat mat, PetscInt row, PetscInt col, PetscScalar *va)
973 {
974   return MatGetValues(mat, 1, &row, 1, &col, va);
975 }
976 
977 /*MC
978    MatSetValueLocal - Inserts or adds a single value into a matrix, using a local numbering of the nodes.
979 
980    Not Collective
981 
982    Input Parameters:
983 +  m - the matrix
984 .  i - the row location of the entry
985 .  j - the column location of the entry
986 .  va - the value to insert
987 -  mode - either `INSERT_VALUES` or `ADD_VALUES`
988 
989    Level: intermediate
990 
991    Notes:
992    For efficiency one should use `MatSetValuesLocal()` and set several values simultaneously.
993 
994    See notes for `MatSetValuesLocal()` for additional information on when and how this function can be used.
995 
996 .seealso: [](ch_matrices), `MatSetValue()`, `MatSetValuesLocal()`
997 M*/
998 static inline PetscErrorCode MatSetValueLocal(Mat m, PetscInt i, PetscInt j, PetscScalar va, InsertMode mode)
999 {
1000   return MatSetValuesLocal(m, 1, &i, 1, &j, &va, mode);
1001 }
1002 
1003 /*MC
1004    MatPreallocateBegin - Begins the block of code that will count the number of nonzeros per
1005        row in a matrix providing the data that one can use to correctly preallocate the matrix.
1006 
1007    Synopsis:
1008    #include <petscmat.h>
1009    PetscErrorCode MatPreallocateBegin(MPI_Comm comm, PetscInt nrows, PetscInt ncols, PetscInt *dnz, PetscInt *onz)
1010 
1011    Collective
1012 
1013    Input Parameters:
1014 +  comm - the communicator that will share the eventually allocated matrix
1015 .  nrows - the number of LOCAL rows in the matrix
1016 -  ncols - the number of LOCAL columns in the matrix
1017 
1018    Output Parameters:
1019 +  dnz - the array that will be passed to the matrix preallocation routines
1020 -  onz - the other array passed to the matrix preallocation routines
1021 
1022    Level: deprecated (since v3.19)
1023 
1024    Notes:
1025    This routine is no longer needed since assembling matrices without explicit preallocation will not be slower than
1026    the use of this routine
1027 
1028    This is a macro that handles its own error checking, it does not return an error code.
1029 
1030    Do not malloc or free `dnz` and `onz`, that is handled internally by these routines
1031 
1032    Developer Note:
1033     This is a MACRO not a function because it has a leading { that is closed by `PetscPreallocateFinalize()`.
1034 
1035 .seealso: [](ch_matrices), `MatPreallocateEnd()`, `MatPreallocateSet()`, `MatPreallocateSymmetricSetBlock()`, `MatPreallocateSetLocal()`,
1036           `MatPreallocateSymmetricSetLocalBlock()`
1037 M*/
1038 #define MatPreallocateBegin(comm, nrows, ncols, dnz, onz) \
1039   do { \
1040     PetscInt              __nrows = (nrows), __ncols = (ncols), __rstart, __end = 0; \
1041     PetscInt PETSC_UNUSED __start; \
1042     PetscCall(PetscCalloc2(__nrows, &(dnz), __nrows, &(onz))); \
1043     PetscCallMPI(MPI_Scan(&__ncols, &__end, 1, MPIU_INT, MPI_SUM, comm)); \
1044     __start = __end - __ncols; \
1045     (void)__start; \
1046     PetscCallMPI(MPI_Scan(&__nrows, &__rstart, 1, MPIU_INT, MPI_SUM, comm)); \
1047   __rstart -= __nrows
1048 
1049 #define MatPreallocateInitialize(...) PETSC_DEPRECATED_MACRO("GCC warning \"Use MatPreallocateBegin() (since version 3.18)\"") MatPreallocateBegin(__VA_ARGS__)
1050 
1051 /*MC
1052    MatPreallocateSetLocal - Indicates the locations (rows and columns) in the matrix where nonzeros will be
1053        inserted using a local number of the rows and columns
1054 
1055    Synopsis:
1056    #include <petscmat.h>
1057    PetscErrorCode MatPreallocateSetLocal(ISLocalToGlobalMappping map,PetscInt nrows, PetscInt *rows,PetscInt ncols, PetscInt *cols,PetscInt *dnz, PetscInt *onz)
1058 
1059    Not Collective
1060 
1061    Input Parameters:
1062 +  map - the row mapping from local numbering to global numbering
1063 .  nrows - the number of rows indicated
1064 .  rows - the indices of the rows
1065 .  cmap - the column mapping from local to global numbering
1066 .  ncols - the number of columns in the matrix
1067 .  cols - the columns indicated
1068 .  dnz - the array that will be passed to the matrix preallocation routines
1069 -  onz - the other array passed to the matrix preallocation routines
1070 
1071    Level: deprecated (since v3.19)
1072 
1073    Notes:
1074    This routine is no longer needed since assembling matrices without explicit preallocation will not be slower than
1075    the use of this routine
1076 
1077    Do not malloc or free `dnz` and `onz`, that is handled internally by these routines
1078 
1079 .seealso: [](ch_matrices), `MatPreallocateEnd()`, `MatPreallocateSet()`, `MatPreallocateSymmetricSetBlock()`
1080           `MatPreallocateBegin()`, `MatPreallocateSymmetricSetLocalBlock()`, `MatPreallocateSetLocalRemoveDups()`
1081 M*/
1082 #define MatPreallocateSetLocal(rmap, nrows, rows, cmap, ncols, cols, dnz, onz) \
1083   PetscMacroReturnStandard(PetscCall(ISLocalToGlobalMappingApply(rmap, nrows, rows, rows)); PetscCall(ISLocalToGlobalMappingApply(cmap, ncols, cols, cols)); for (PetscInt __l = 0; __l < nrows; __l++) PetscCall(MatPreallocateSet((rows)[__l], ncols, cols, dnz, onz));)
1084 
1085 /*MC
1086    MatPreallocateSetLocalRemoveDups - Indicates the locations (rows and columns) in the matrix where nonzeros will be
1087        inserted using a local number of the rows and columns. This version removes any duplicate columns in cols
1088 
1089    Synopsis:
1090    #include <petscmat.h>
1091    PetscErrorCode MatPreallocateSetLocalRemoveDups(ISLocalToGlobalMappping map,PetscInt nrows, PetscInt *rows,PetscInt ncols, PetscInt *cols,PetscInt *dnz, PetscInt *onz)
1092 
1093    Not Collective
1094 
1095    Input Parameters:
1096 +  map - the row mapping from local numbering to global numbering
1097 .  nrows - the number of rows indicated
1098 .  rows - the indices of the rows (these values are mapped to the global values)
1099 .  cmap - the column mapping from local to global numbering
1100 .  ncols - the number of columns in the matrix   (this value will be changed if duplicate columns are found)
1101 .  cols - the columns indicated (these values are mapped to the global values, they are then sorted and duplicates removed)
1102 .  dnz - the array that will be passed to the matrix preallocation routines
1103 -  onz - the other array passed to the matrix preallocation routines
1104 
1105    Level: deprecated (since v3.19)
1106 
1107    Notes:
1108    This routine is no longer needed since assembling matrices without explicit preallocation will not be slower than
1109    the use of this routine
1110 
1111    Do not malloc or free `dnz` and `onz`, that is handled internally by these routines
1112 
1113 .seealso: [](ch_matrices), `MatPreallocateEnd()`, `MatPreallocateSet()`, `MatPreallocateSymmetricSetBlock()`
1114           `MatPreallocateBegin()`, `MatPreallocateSymmetricSetLocalBlock()`, `MatPreallocateSetLocal()`
1115 M*/
1116 #define MatPreallocateSetLocalRemoveDups(rmap, nrows, rows, cmap, ncols, cols, dnz, onz) \
1117   PetscMacroReturnStandard(PetscCall(ISLocalToGlobalMappingApply(rmap, nrows, rows, rows)); PetscCall(ISLocalToGlobalMappingApply(cmap, ncols, cols, cols)); PetscCall(PetscSortRemoveDupsInt(&ncols, cols)); for (PetscInt __l = 0; __l < nrows; __l++) PetscCall(MatPreallocateSet((rows)[__l], ncols, cols, dnz, onz));)
1118 
1119 /*MC
1120    MatPreallocateSetLocalBlock - Indicates the locations (rows and columns) in the matrix where nonzeros will be
1121        inserted using a local number of the rows and columns
1122 
1123    Synopsis:
1124    #include <petscmat.h>
1125    PetscErrorCode MatPreallocateSetLocalBlock(ISLocalToGlobalMappping map,PetscInt nrows, PetscInt *rows,PetscInt ncols, PetscInt *cols,PetscInt *dnz, PetscInt *onz)
1126 
1127    Not Collective
1128 
1129    Input Parameters:
1130 +  map - the row mapping from local numbering to global numbering
1131 .  nrows - the number of rows indicated
1132 .  rows - the indices of the rows
1133 .  cmap - the column mapping from local to global numbering
1134 .  ncols - the number of columns in the matrix
1135 .  cols - the columns indicated
1136 .  dnz - the array that will be passed to the matrix preallocation routines
1137 -  onz - the other array passed to the matrix preallocation routines
1138 
1139    Level: deprecated (since v3.19)
1140 
1141    Notes:
1142    This routine is no longer needed since assembling matrices without explicit preallocation will not be slower than
1143    the use of this routine
1144 
1145    Do not malloc or free `dnz` and `onz`, that is handled internally by these routines
1146 
1147 .seealso: [](ch_matrices), `MatPreallocateEnd()`, `MatPreallocateSet()`, `MatPreallocateSymmetricSetBlock()`
1148           `MatPreallocateBegin()`, `MatPreallocateSymmetricSetLocalBlock()`
1149 M*/
1150 #define MatPreallocateSetLocalBlock(rmap, nrows, rows, cmap, ncols, cols, dnz, onz) \
1151   PetscMacroReturnStandard(PetscCall(ISLocalToGlobalMappingApplyBlock(rmap, nrows, rows, rows)); PetscCall(ISLocalToGlobalMappingApplyBlock(cmap, ncols, cols, cols)); for (PetscInt __l = 0; __l < nrows; __l++) PetscCall(MatPreallocateSet((rows)[__l], ncols, cols, dnz, onz));)
1152 
1153 /*MC
1154    MatPreallocateSymmetricSetLocalBlock - Indicates the locations (rows and columns) in the matrix where nonzeros will be
1155        inserted using a local number of the rows and columns
1156 
1157    Synopsis:
1158    #include <petscmat.h>
1159    PetscErrorCode MatPreallocateSymmetricSetLocalBlock(ISLocalToGlobalMappping map,PetscInt nrows, PetscInt *rows,PetscInt ncols, PetscInt *cols,PetscInt *dnz, PetscInt *onz)
1160 
1161    Not Collective
1162 
1163    Input Parameters:
1164 +  map - the mapping between local numbering and global numbering
1165 .  nrows - the number of rows indicated
1166 .  rows - the indices of the rows
1167 .  ncols - the number of columns in the matrix
1168 .  cols - the columns indicated
1169 .  dnz - the array that will be passed to the matrix preallocation routines
1170 -  onz - the other array passed to the matrix preallocation routines
1171 
1172    Level: deprecated (since v3.19)
1173 
1174    Notes:
1175    This routine is no longer needed since assembling matrices without explicit preallocation will not be slower than
1176    the use of this routine
1177 
1178    Do not malloc or free `dnz` and `onz` that is handled internally by these routines
1179 
1180 .seealso: [](ch_matrices), `MatPreallocateEnd()`, `MatPreallocateSet()`
1181           `MatPreallocateBegin()`, `MatPreallocateSetLocal()`
1182 M*/
1183 #define MatPreallocateSymmetricSetLocalBlock(map, nrows, rows, ncols, cols, dnz, onz) \
1184   PetscMacroReturnStandard(PetscCall(ISLocalToGlobalMappingApplyBlock(map, nrows, rows, rows)); PetscCall(ISLocalToGlobalMappingApplyBlock(map, ncols, cols, cols)); for (PetscInt __l = 0; __l < nrows; __l++) PetscCall(MatPreallocateSymmetricSetBlock((rows)[__l], ncols, cols, dnz, onz));)
1185 
1186 /*MC
1187    MatPreallocateSet - Indicates the locations (rows and columns) in the matrix where nonzeros will be
1188        inserted using a local number of the rows and columns
1189 
1190    Synopsis:
1191    #include <petscmat.h>
1192    PetscErrorCode MatPreallocateSet(PetscInt nrows, PetscInt *rows,PetscInt ncols, PetscInt *cols,PetscInt *dnz, PetscInt *onz)
1193 
1194    Not Collective
1195 
1196    Input Parameters:
1197 +  row - the row
1198 .  ncols - the number of columns in the matrix
1199 -  cols - the columns indicated
1200 
1201    Output Parameters:
1202 +  dnz - the array that will be passed to the matrix preallocation routines
1203 -  onz - the other array passed to the matrix preallocation routines
1204 
1205    Level: deprecated (since v3.19)
1206 
1207    Notes:
1208    This routine is no longer needed since assembling matrices without explicit preallocation will not be slower than
1209    the use of this routine
1210 
1211    Do not malloc or free `dnz` and `onz` that is handled internally by these routines
1212 
1213    This is a MACRO not a function because it uses variables declared in MatPreallocateBegin().
1214 
1215 .seealso: [](ch_matrices), `MatPreallocateEnd()`, `MatPreallocateSet()`, `MatPreallocateSymmetricSetBlock()`
1216           `MatPreallocateBegin()`, `MatPreallocateSetLocal()`
1217 M*/
1218 #define MatPreallocateSet(row, nc, cols, dnz, onz) \
1219   PetscMacroReturnStandard(PetscCheck(row >= __rstart, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Trying to set preallocation for row %" PetscInt_FMT " less than first local row %" PetscInt_FMT, row, __rstart); PetscCheck(row < __rstart + __nrows, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Trying to set preallocation for row %" PetscInt_FMT " greater than last local row %" PetscInt_FMT, row, __rstart + __nrows - 1); for (PetscInt __i = 0; __i < nc; ++__i) { \
1220     if ((cols)[__i] < __start || (cols)[__i] >= __end) onz[row - __rstart]++; \
1221     else if (dnz[row - __rstart] < __ncols) dnz[row - __rstart]++; \
1222   })
1223 
1224 /*MC
1225    MatPreallocateSymmetricSetBlock - Indicates the locations (rows and columns) in the matrix where nonzeros will be
1226        inserted using a local number of the rows and columns
1227 
1228    Synopsis:
1229    #include <petscmat.h>
1230    PetscErrorCode MatPreallocateSymmetricSetBlock(PetscInt nrows, PetscInt *rows,PetscInt ncols, PetscInt *cols,PetscInt *dnz, PetscInt *onz)
1231 
1232    Not Collective
1233 
1234    Input Parameters:
1235 +  nrows - the number of rows indicated
1236 .  rows - the indices of the rows
1237 .  ncols - the number of columns in the matrix
1238 .  cols - the columns indicated
1239 .  dnz - the array that will be passed to the matrix preallocation routines
1240 -  onz - the other array passed to the matrix preallocation routines
1241 
1242    Level: deprecated (since v3.19)
1243 
1244    Notes:
1245    This routine is no longer needed since assembling matrices without explicit preallocation will not be slower than
1246    the use of this routine
1247 
1248    Do not malloc or free `dnz` and `onz` that is handled internally by these routines
1249 
1250    This is a MACRO not a function because it uses variables declared in MatPreallocateBegin().
1251 
1252 .seealso: [](ch_matrices), `MatPreallocateEnd()`, `MatPreallocateSet()`, `MatPreallocateBegin()`,
1253           `MatPreallocateSymmetricSetLocalBlock()`, `MatPreallocateSetLocal()`
1254 M*/
1255 #define MatPreallocateSymmetricSetBlock(row, nc, cols, dnz, onz) \
1256   PetscMacroReturnStandard(for (PetscInt __i = 0; __i < nc; __i++) { \
1257     if (cols[__i] >= __end) onz[row - __rstart]++; \
1258     else if (cols[__i] >= row && dnz[row - __rstart] < __ncols) dnz[row - __rstart]++; \
1259   })
1260 
1261 /*MC
1262    MatPreallocateLocation -  An alternative to MatPreallocateSet() that puts the nonzero locations into the matrix if it exists
1263 
1264    Synopsis:
1265    #include <petscmat.h>
1266    PetscErrorCode MatPreallocateLocations(Mat A,PetscInt row,PetscInt ncols,PetscInt *cols,PetscInt *dnz,PetscInt *onz)
1267 
1268    Not Collective
1269 
1270    Input Parameters:
1271 +  A - matrix
1272 .  row - row where values exist (must be local to this process)
1273 .  ncols - number of columns
1274 .  cols - columns with nonzeros
1275 .  dnz - the array that will be passed to the matrix preallocation routines
1276 -  onz - the other array passed to the matrix preallocation routines
1277 
1278    Level: deprecated (since v3.19)
1279 
1280    Notes:
1281    This routine is no longer needed since assembling matrices without explicit preallocation will not be slower than
1282    the use of this routine
1283 
1284    Do not malloc or free `dnz` and `onz` that is handled internally by these routines
1285 
1286    This is a MACRO not a function because it uses a bunch of variables private to the MatPreallocation.... routines.
1287 
1288 .seealso: [](ch_matrices), `MatPreallocateBegin()`, `MatPreallocateSet()`, `MatPreallocateSymmetricSetBlock()`, `MatPreallocateSetLocal()`,
1289           `MatPreallocateSymmetricSetLocalBlock()`
1290 M*/
1291 #define MatPreallocateLocation(A, row, ncols, cols, dnz, onz) (A ? MatSetValues(A, 1, &row, ncols, cols, NULL, INSERT_VALUES) : MatPreallocateSet(row, ncols, cols, dnz, onz))
1292 
1293 /*MC
1294    MatPreallocateEnd - Ends the block of code that will count the number of nonzeros per
1295        row in a matrix providing the data that one can use to correctly preallocate the matrix.
1296 
1297    Synopsis:
1298    #include <petscmat.h>
1299    PetscErrorCode MatPreallocateEnd(PetscInt *dnz, PetscInt *onz)
1300 
1301    Collective
1302 
1303    Input Parameters:
1304 +  dnz - the array that was be passed to the matrix preallocation routines
1305 -  onz - the other array passed to the matrix preallocation routines
1306 
1307    Level: deprecated (since v3.19)
1308 
1309    Notes:
1310    This routine is no longer needed since assembling matrices without explicit preallocation will not be slower than
1311    the use of this routine
1312 
1313    Do not malloc or free `dnz` and `onz`, that is handled internally by these routines
1314 
1315    Developer Note:
1316     This is a MACRO not a function because it closes the { started in MatPreallocateBegin().
1317 
1318 .seealso: [](ch_matrices), `MatPreallocateBegin()`, `MatPreallocateSet()`, `MatPreallocateSymmetricSetBlock()`, `MatPreallocateSetLocal()`,
1319           `MatPreallocateSymmetricSetLocalBlock()`
1320 M*/
1321 #define MatPreallocateEnd(dnz, onz) \
1322   PetscCall(PetscFree2(dnz, onz)); \
1323   } \
1324   while (0)
1325 
1326 #define MatPreallocateFinalize(...) PETSC_DEPRECATED_MACRO("GCC warning \"Use MatPreallocateEnd() (since version 3.18)\"") MatPreallocateEnd(__VA_ARGS__)
1327 
1328 /* Routines unique to particular data structures */
1329 PETSC_EXTERN PetscErrorCode MatShellGetContext(Mat, void *);
1330 
1331 PETSC_EXTERN PetscErrorCode MatInodeAdjustForInodes(Mat, IS *, IS *);
1332 PETSC_EXTERN PetscErrorCode MatInodeGetInodeSizes(Mat, PetscInt *, PetscInt *[], PetscInt *);
1333 
1334 PETSC_EXTERN PetscErrorCode MatSeqAIJSetColumnIndices(Mat, PetscInt[]);
1335 PETSC_EXTERN PetscErrorCode MatSeqBAIJSetColumnIndices(Mat, PetscInt[]);
1336 PETSC_EXTERN PetscErrorCode MatCreateSeqAIJWithArrays(MPI_Comm, PetscInt, PetscInt, PetscInt[], PetscInt[], PetscScalar[], Mat *);
1337 PETSC_EXTERN PetscErrorCode MatCreateSeqBAIJWithArrays(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt[], PetscInt[], PetscScalar[], Mat *);
1338 PETSC_EXTERN PetscErrorCode MatCreateSeqSBAIJWithArrays(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt[], PetscInt[], PetscScalar[], Mat *);
1339 PETSC_EXTERN PetscErrorCode MatCreateSeqAIJFromTriple(MPI_Comm, PetscInt, PetscInt, PetscInt[], PetscInt[], PetscScalar[], Mat *, PetscInt, PetscBool);
1340 
1341 #define MAT_SKIP_ALLOCATION -4
1342 
1343 PETSC_EXTERN PetscErrorCode MatSeqBAIJSetPreallocation(Mat, PetscInt, PetscInt, const PetscInt[]);
1344 PETSC_EXTERN PetscErrorCode MatSeqSBAIJSetPreallocation(Mat, PetscInt, PetscInt, const PetscInt[]);
1345 PETSC_EXTERN PetscErrorCode MatSeqAIJSetPreallocation(Mat, PetscInt, const PetscInt[]);
1346 PETSC_EXTERN PetscErrorCode MatSeqAIJSetTotalPreallocation(Mat, PetscInt);
1347 
1348 PETSC_EXTERN PetscErrorCode MatMPIBAIJSetPreallocation(Mat, PetscInt, PetscInt, const PetscInt[], PetscInt, const PetscInt[]);
1349 PETSC_EXTERN PetscErrorCode MatMPISBAIJSetPreallocation(Mat, PetscInt, PetscInt, const PetscInt[], PetscInt, const PetscInt[]);
1350 PETSC_EXTERN PetscErrorCode MatMPIAIJSetPreallocation(Mat, PetscInt, const PetscInt[], PetscInt, const PetscInt[]);
1351 PETSC_EXTERN PetscErrorCode MatSeqAIJSetPreallocationCSR(Mat, const PetscInt[], const PetscInt[], const PetscScalar[]);
1352 PETSC_EXTERN PetscErrorCode MatSeqBAIJSetPreallocationCSR(Mat, PetscInt, const PetscInt[], const PetscInt[], const PetscScalar[]);
1353 PETSC_EXTERN PetscErrorCode MatMPIAIJSetPreallocationCSR(Mat, const PetscInt[], const PetscInt[], const PetscScalar[]);
1354 PETSC_EXTERN PetscErrorCode MatMPIBAIJSetPreallocationCSR(Mat, PetscInt, const PetscInt[], const PetscInt[], const PetscScalar[]);
1355 PETSC_EXTERN PetscErrorCode MatMPIAdjSetPreallocation(Mat, PetscInt[], PetscInt[], PetscInt[]);
1356 PETSC_EXTERN PetscErrorCode MatMPIAdjToSeq(Mat, Mat *);
1357 PETSC_EXTERN PetscErrorCode MatMPIAdjToSeqRankZero(Mat, Mat *);
1358 PETSC_EXTERN PetscErrorCode MatMPIDenseSetPreallocation(Mat, PetscScalar[]);
1359 PETSC_EXTERN PetscErrorCode MatSeqDenseSetPreallocation(Mat, PetscScalar[]);
1360 PETSC_EXTERN PetscErrorCode MatMPIAIJGetSeqAIJ(Mat, Mat *, Mat *, const PetscInt *[]);
1361 PETSC_EXTERN PetscErrorCode MatMPIBAIJGetSeqBAIJ(Mat, Mat *, Mat *, const PetscInt *[]);
1362 PETSC_EXTERN PetscErrorCode MatMPIAdjCreateNonemptySubcommMat(Mat, Mat *);
1363 
1364 PETSC_EXTERN PetscErrorCode MatDenseGetLDA(Mat, PetscInt *);
1365 PETSC_EXTERN PetscErrorCode MatDenseSetLDA(Mat, PetscInt);
1366 PETSC_DEPRECATED_FUNCTION("Use MatDenseSetLDA() (since version 3.14)") static inline PetscErrorCode MatSeqDenseSetLDA(Mat A, PetscInt lda)
1367 {
1368   return MatDenseSetLDA(A, lda);
1369 }
1370 PETSC_EXTERN PetscErrorCode MatDenseGetLocalMatrix(Mat, Mat *);
1371 
1372 PETSC_EXTERN PetscErrorCode MatBlockMatSetPreallocation(Mat, PetscInt, PetscInt, const PetscInt[]);
1373 
1374 PETSC_EXTERN PetscErrorCode MatStoreValues(Mat);
1375 PETSC_EXTERN PetscErrorCode MatRetrieveValues(Mat);
1376 
1377 PETSC_EXTERN PetscErrorCode MatFindNonzeroRows(Mat, IS *);
1378 PETSC_EXTERN PetscErrorCode MatFindZeroRows(Mat, IS *);
1379 /*
1380   These routines are not usually accessed directly, rather solving is
1381   done through the KSP and PC interfaces.
1382 */
1383 
1384 /*J
1385     MatOrderingType - String with the name of a PETSc matrix ordering. These orderings are most commonly used
1386     to reduce fill in sparse factorizations.
1387 
1388    Level: beginner
1389 
1390    Notes:
1391    If `MATORDERINGEXTERNAL` is used then PETSc does not compute an ordering and instead the external factorization solver package called utilizes one
1392    of its own.
1393 
1394    There is no `MatOrdering` object, the ordering is obtained directly from the matrix with `MatGetOrdering()`
1395 
1396    Developer Note:
1397    This API should be converted to an API similar to those for `MatColoring` and `MatPartitioning`
1398 
1399 .seealso: [](ch_matrices), [](sec_graph), `MatGetFactor()`, `MatGetOrdering()`, `MatColoringType`, `MatPartitioningType`, `MatCoarsenType`, `MatCoarsenType`,
1400           `PCFactorSetOrderingType()`
1401 J*/
1402 typedef const char *MatOrderingType;
1403 #define MATORDERINGNATURAL       "natural"
1404 #define MATORDERINGND            "nd"
1405 #define MATORDERING1WD           "1wd"
1406 #define MATORDERINGRCM           "rcm"
1407 #define MATORDERINGQMD           "qmd"
1408 #define MATORDERINGROWLENGTH     "rowlength"
1409 #define MATORDERINGWBM           "wbm"
1410 #define MATORDERINGSPECTRAL      "spectral"
1411 #define MATORDERINGAMD           "amd"           /* only works if UMFPACK is installed with PETSc */
1412 #define MATORDERINGMETISND       "metisnd"       /* only works if METIS is installed with PETSc */
1413 #define MATORDERINGNATURAL_OR_ND "natural_or_nd" /* special coase used for Cholesky and ICC, allows ND when AIJ matrix is used but Natural when SBAIJ is used */
1414 #define MATORDERINGEXTERNAL      "external"      /* uses an ordering type internal to the factorization package */
1415 
1416 PETSC_EXTERN PetscErrorCode    MatGetOrdering(Mat, MatOrderingType, IS *, IS *);
1417 PETSC_EXTERN PetscErrorCode    MatGetOrderingList(PetscFunctionList *);
1418 PETSC_EXTERN PetscErrorCode    MatOrderingRegister(const char[], PetscErrorCode (*)(Mat, MatOrderingType, IS *, IS *));
1419 PETSC_EXTERN PetscFunctionList MatOrderingList;
1420 
1421 #include "petscmatcoarsen.h"
1422 
1423 PETSC_EXTERN PetscErrorCode MatReorderForNonzeroDiagonal(Mat, PetscReal, IS, IS);
1424 PETSC_EXTERN PetscErrorCode MatCreateLaplacian(Mat, PetscReal, PetscBool, Mat *);
1425 
1426 PETSC_EXTERN PetscErrorCode MatFactorGetPreferredOrdering(Mat, MatFactorType, MatOrderingType *);
1427 
1428 /*S
1429     MatFactorShiftType - Type of numeric shift used for factorizations
1430 
1431    Values:
1432 +  `MAT_SHIFT_NONE` - do not shift the matrix diagonal entries
1433 .  `MAT_SHIFT_NONZERO` - shift the entries to be non-zero
1434 .  `MAT_SHIFT_POSITIVE_DEFINITE` - shift the entries to force the factorization to be positive definite
1435 -  `MAT_SHIFT_INBLOCKS` - only shift the factors inside the small dense diagonal blocks of the matrix, for example with `MATBAIJ`
1436 
1437    Level: intermediate
1438 
1439 .seealso: [](ch_matrices), `Mat`, `MatGetFactor()`, `PCFactorSetShiftType()`
1440 S*/
1441 typedef enum {
1442   MAT_SHIFT_NONE,
1443   MAT_SHIFT_NONZERO,
1444   MAT_SHIFT_POSITIVE_DEFINITE,
1445   MAT_SHIFT_INBLOCKS
1446 } MatFactorShiftType;
1447 PETSC_EXTERN const char *const MatFactorShiftTypes[];
1448 PETSC_EXTERN const char *const MatFactorShiftTypesDetail[];
1449 
1450 /*S
1451     MatFactorError - indicates what type of error was generated in a matrix factorization
1452 
1453     Values:
1454 +   `MAT_FACTOR_NOERROR` - there was no error during the factorization
1455 .   `MAT_FACTOR_STRUCT_ZEROPIVOT` - there was a missing entry in a diagonal location of the matrix
1456 .   `MAT_FACTOR_NUMERIC_ZEROPIVOT` - there was a (near) zero pivot during the factorization
1457 .   `MAT_FACTOR_OUTMEMORY` - the factorization has run out of memory
1458 -   `MAT_FACTOR_OTHER` - some other error has occurred.
1459 
1460     Level: intermediate
1461 
1462     Note:
1463     When a factorization is done in a preconditioner `PC` the error may be propagated up to a `PCFailedReason` or a `KSPConvergedReason`
1464 
1465 .seealso: [](ch_matrices), `Mat`, `MatGetFactor()`, `MatFactorGetError()`, `MatFactorGetErrorZeroPivot()`, `MatFactorClearError()`,
1466           `PCFailedReason`, `PCGetFailedReason()`, `KSPConvergedReason`
1467 S*/
1468 typedef enum {
1469   MAT_FACTOR_NOERROR,
1470   MAT_FACTOR_STRUCT_ZEROPIVOT,
1471   MAT_FACTOR_NUMERIC_ZEROPIVOT,
1472   MAT_FACTOR_OUTMEMORY,
1473   MAT_FACTOR_OTHER
1474 } MatFactorError;
1475 
1476 PETSC_EXTERN PetscErrorCode MatFactorGetError(Mat, MatFactorError *);
1477 PETSC_EXTERN PetscErrorCode MatFactorClearError(Mat);
1478 PETSC_EXTERN PetscErrorCode MatFactorGetErrorZeroPivot(Mat, PetscReal *, PetscInt *);
1479 
1480 /*S
1481    MatFactorInfo - Data passed into the matrix factorization routines, and information about the resulting factorization
1482 
1483    Level: developer
1484 
1485    Note:
1486    You can use `MatFactorInfoInitialize()` to set default values.
1487 
1488    Fortran Note:
1489    The data is available in a double precision arrays of size `MAT_FACTORINFO_SIZE`
1490 
1491 .seealso: [](ch_matrices), `Mat`, `MatInfo`, `MatGetFactor()`, `MatLUFactorSymbolic()`, `MatILUFactorSymbolic()`, `MatCholeskyFactorSymbolic()`,
1492           `MatICCFactorSymbolic()`, `MatICCFactor()`, `MatFactorInfoInitialize()`
1493 S*/
1494 typedef struct {
1495   PetscReal diagonal_fill; /* force diagonal to fill in if initially not filled */
1496   PetscReal usedt;
1497   PetscReal dt;            /* drop tolerance */
1498   PetscReal dtcol;         /* tolerance for pivoting */
1499   PetscReal dtcount;       /* maximum nonzeros to be allowed per row */
1500   PetscReal fill;          /* expected fill, nonzeros in factored matrix/nonzeros in original matrix */
1501   PetscReal levels;        /* ICC/ILU(levels) */
1502   PetscReal pivotinblocks; /* for BAIJ and SBAIJ matrices pivot in factorization on blocks, default 1.0
1503                                    factorization may be faster if do not pivot */
1504   PetscReal zeropivot;     /* pivot is called zero if less than this */
1505   PetscReal shifttype;     /* type of shift added to matrix factor to prevent zero pivots */
1506   PetscReal shiftamount;   /* how large the shift is */
1507 } MatFactorInfo;
1508 
1509 PETSC_EXTERN PetscErrorCode MatFactorInfoInitialize(MatFactorInfo *);
1510 PETSC_EXTERN PetscErrorCode MatCholeskyFactor(Mat, IS, const MatFactorInfo *);
1511 PETSC_EXTERN PetscErrorCode MatCholeskyFactorSymbolic(Mat, Mat, IS, const MatFactorInfo *);
1512 PETSC_EXTERN PetscErrorCode MatCholeskyFactorNumeric(Mat, Mat, const MatFactorInfo *);
1513 PETSC_EXTERN PetscErrorCode MatLUFactor(Mat, IS, IS, const MatFactorInfo *);
1514 PETSC_EXTERN PetscErrorCode MatILUFactor(Mat, IS, IS, const MatFactorInfo *);
1515 PETSC_EXTERN PetscErrorCode MatLUFactorSymbolic(Mat, Mat, IS, IS, const MatFactorInfo *);
1516 PETSC_EXTERN PetscErrorCode MatILUFactorSymbolic(Mat, Mat, IS, IS, const MatFactorInfo *);
1517 PETSC_EXTERN PetscErrorCode MatICCFactorSymbolic(Mat, Mat, IS, const MatFactorInfo *);
1518 PETSC_EXTERN PetscErrorCode MatICCFactor(Mat, IS, const MatFactorInfo *);
1519 PETSC_EXTERN PetscErrorCode MatLUFactorNumeric(Mat, Mat, const MatFactorInfo *);
1520 PETSC_EXTERN PetscErrorCode MatQRFactor(Mat, IS, const MatFactorInfo *);
1521 PETSC_EXTERN PetscErrorCode MatQRFactorSymbolic(Mat, Mat, IS, const MatFactorInfo *);
1522 PETSC_EXTERN PetscErrorCode MatQRFactorNumeric(Mat, Mat, const MatFactorInfo *);
1523 PETSC_EXTERN PetscErrorCode MatGetInertia(Mat, PetscInt *, PetscInt *, PetscInt *);
1524 PETSC_EXTERN PetscErrorCode MatSolve(Mat, Vec, Vec);
1525 PETSC_EXTERN PetscErrorCode MatForwardSolve(Mat, Vec, Vec);
1526 PETSC_EXTERN PetscErrorCode MatBackwardSolve(Mat, Vec, Vec);
1527 PETSC_EXTERN PetscErrorCode MatSolveAdd(Mat, Vec, Vec, Vec);
1528 PETSC_EXTERN PetscErrorCode MatSolveTranspose(Mat, Vec, Vec);
1529 PETSC_EXTERN PetscErrorCode MatSolveTransposeAdd(Mat, Vec, Vec, Vec);
1530 PETSC_EXTERN PetscErrorCode MatSolves(Mat, Vecs, Vecs);
1531 PETSC_EXTERN PetscErrorCode MatSetUnfactored(Mat);
1532 
1533 typedef enum {
1534   MAT_FACTOR_SCHUR_UNFACTORED,
1535   MAT_FACTOR_SCHUR_FACTORED,
1536   MAT_FACTOR_SCHUR_INVERTED
1537 } MatFactorSchurStatus;
1538 PETSC_EXTERN PetscErrorCode MatFactorSetSchurIS(Mat, IS);
1539 PETSC_EXTERN PetscErrorCode MatFactorGetSchurComplement(Mat, Mat *, MatFactorSchurStatus *);
1540 PETSC_EXTERN PetscErrorCode MatFactorRestoreSchurComplement(Mat, Mat *, MatFactorSchurStatus);
1541 PETSC_EXTERN PetscErrorCode MatFactorInvertSchurComplement(Mat);
1542 PETSC_EXTERN PetscErrorCode MatFactorCreateSchurComplement(Mat, Mat *, MatFactorSchurStatus *);
1543 PETSC_EXTERN PetscErrorCode MatFactorSolveSchurComplement(Mat, Vec, Vec);
1544 PETSC_EXTERN PetscErrorCode MatFactorSolveSchurComplementTranspose(Mat, Vec, Vec);
1545 PETSC_EXTERN PetscErrorCode MatFactorFactorizeSchurComplement(Mat);
1546 
1547 PETSC_EXTERN PetscErrorCode MatSeqDenseInvert(Mat);
1548 /*E
1549     MatSORType - What type of (S)SOR to perform
1550 
1551    Values:
1552 +  `SOR_FORWARD_SWEEP` - do a sweep from the first row of the matrix to the last
1553 .  `SOR_BACKWARD_SWEEP` -  do a sweep from the last row to the first
1554 .  `SOR_SYMMETRIC_SWEEP` - do a sweep from the first row to the last and then back to the first
1555 .  `SOR_LOCAL_FORWARD_SWEEP` - each MPI rank does its own forward sweep with no communication
1556 .  `SOR_LOCAL_BACKWARD_SWEEP` - each MPI rank does its own backward sweep with no communication
1557 .  `SOR_LOCAL_SYMMETRIC_SWEEP` - each MPI rank does its own symmetric sweep with no communication
1558 .  `SOR_ZERO_INITIAL_GUESS` - indicates the initial solution is zero so the sweep can avoid unneeded computation
1559 .  `SOR_EISENSTAT` - apply the Eisentat application of SOR, see `PCEISENSTAT`
1560 .  `SOR_APPLY_UPPER` - multiply by the upper triangular portion of the matrix
1561 -  `SOR_APPLY_LOWER` - multiply by the lower triangular portion of the matrix
1562 
1563     Level: beginner
1564 
1565    Note:
1566    These may be bitwise ORd together
1567 
1568    Developer Note:
1569    Since `MatSORType` may be bitwise ORd together, so do not change the numerical values below
1570 
1571 .seealso: [](ch_matrices), `MatSOR()`
1572 E*/
1573 typedef enum {
1574   SOR_FORWARD_SWEEP         = 1,
1575   SOR_BACKWARD_SWEEP        = 2,
1576   SOR_SYMMETRIC_SWEEP       = 3,
1577   SOR_LOCAL_FORWARD_SWEEP   = 4,
1578   SOR_LOCAL_BACKWARD_SWEEP  = 8,
1579   SOR_LOCAL_SYMMETRIC_SWEEP = 12,
1580   SOR_ZERO_INITIAL_GUESS    = 16,
1581   SOR_EISENSTAT             = 32,
1582   SOR_APPLY_UPPER           = 64,
1583   SOR_APPLY_LOWER           = 128
1584 } MatSORType;
1585 PETSC_EXTERN PetscErrorCode MatSOR(Mat, Vec, PetscReal, MatSORType, PetscReal, PetscInt, PetscInt, Vec);
1586 
1587 /*S
1588      MatColoring - Object for managing the coloring of matrices.
1589 
1590    Level: beginner
1591 
1592    Notes:
1593    Coloring of matrices can be computed directly from the sparse matrix nonzero structure via the `MatColoring` object or from the mesh from which the
1594    matrix comes from via `DMCreateColoring()`. In general using the mesh produces a more optimal coloring (fewer colors).
1595 
1596    Once a coloring is available `MatFDColoringCreate()` creates an object that can be used to efficiently compute Jacobians using that coloring. This
1597    same object can also be used to efficiently convert data created by Automatic Differentiation tools to PETSc sparse matrices.
1598 
1599 .seealso: [](ch_matrices), [](sec_graph), `MatFDColoringCreate()`, `MatColoringWeightType`, `ISColoring`, `MatFDColoring`, `DMCreateColoring()`, `MatColoringCreate()`,
1600           `MatPartitioning`, `MatColoringType`, `MatPartitioningType`, `MatOrderingType`, `MatColoringSetWeightType()`,
1601           `MatColoringSetWeights()`, `MatCoarsenType`, `MatCoarsen`
1602 S*/
1603 typedef struct _p_MatColoring *MatColoring;
1604 
1605 /*J
1606     MatColoringType - String with the name of a PETSc matrix coloring
1607 
1608    Level: beginner
1609 
1610 .seealso: [](ch_matrices), [](sec_graph), `Mat`, `MatFDColoringCreate()`, `MatColoringSetType()`, `MatColoring`
1611 J*/
1612 typedef const char *MatColoringType;
1613 #define MATCOLORINGJP      "jp"
1614 #define MATCOLORINGPOWER   "power"
1615 #define MATCOLORINGNATURAL "natural"
1616 #define MATCOLORINGSL      "sl"
1617 #define MATCOLORINGLF      "lf"
1618 #define MATCOLORINGID      "id"
1619 #define MATCOLORINGGREEDY  "greedy"
1620 
1621 /*E
1622    MatColoringWeightType - Type of weight scheme used for the coloring algorithm
1623 
1624     Values:
1625 +   `MAT_COLORING_RANDOM`  - Random weights
1626 .   `MAT_COLORING_LEXICAL` - Lexical weighting based upon global numbering.
1627 -   `MAT_COLORING_LF`      - Last-first weighting.
1628 
1629     Level: intermediate
1630 
1631 .seealso: [](ch_matrices), `MatColoring`, `MatColoringCreate()`, `MatColoringSetWeightType()`, `MatColoringSetWeights()`
1632 E*/
1633 typedef enum {
1634   MAT_COLORING_WEIGHT_RANDOM,
1635   MAT_COLORING_WEIGHT_LEXICAL,
1636   MAT_COLORING_WEIGHT_LF,
1637   MAT_COLORING_WEIGHT_SL
1638 } MatColoringWeightType;
1639 
1640 PETSC_EXTERN PetscErrorCode MatColoringCreate(Mat, MatColoring *);
1641 PETSC_EXTERN PetscErrorCode MatColoringGetDegrees(Mat, PetscInt, PetscInt *);
1642 PETSC_EXTERN PetscErrorCode MatColoringDestroy(MatColoring *);
1643 PETSC_EXTERN PetscErrorCode MatColoringView(MatColoring, PetscViewer);
1644 PETSC_EXTERN PetscErrorCode MatColoringSetType(MatColoring, MatColoringType);
1645 PETSC_EXTERN PetscErrorCode MatColoringSetFromOptions(MatColoring);
1646 PETSC_EXTERN PetscErrorCode MatColoringSetDistance(MatColoring, PetscInt);
1647 PETSC_EXTERN PetscErrorCode MatColoringGetDistance(MatColoring, PetscInt *);
1648 PETSC_EXTERN PetscErrorCode MatColoringSetMaxColors(MatColoring, PetscInt);
1649 PETSC_EXTERN PetscErrorCode MatColoringGetMaxColors(MatColoring, PetscInt *);
1650 PETSC_EXTERN PetscErrorCode MatColoringApply(MatColoring, ISColoring *);
1651 PETSC_EXTERN PetscErrorCode MatColoringRegister(const char[], PetscErrorCode (*)(MatColoring));
1652 PETSC_EXTERN PetscErrorCode MatColoringPatch(Mat, PetscInt, PetscInt, ISColoringValue[], ISColoring *);
1653 PETSC_EXTERN PetscErrorCode MatColoringSetWeightType(MatColoring, MatColoringWeightType);
1654 PETSC_EXTERN PetscErrorCode MatColoringSetWeights(MatColoring, PetscReal *, PetscInt *);
1655 PETSC_EXTERN PetscErrorCode MatColoringCreateWeights(MatColoring, PetscReal **, PetscInt **lperm);
1656 PETSC_EXTERN PetscErrorCode MatColoringTest(MatColoring, ISColoring);
1657 PETSC_DEPRECATED_FUNCTION("Use MatColoringTest() (since version 3.10)") static inline PetscErrorCode MatColoringTestValid(MatColoring matcoloring, ISColoring iscoloring)
1658 {
1659   return MatColoringTest(matcoloring, iscoloring);
1660 }
1661 PETSC_EXTERN PetscErrorCode MatISColoringTest(Mat, ISColoring);
1662 
1663 /*S
1664      MatFDColoring - Object for computing a sparse Jacobian via finite differences with coloring
1665 
1666    Level: beginner
1667 
1668    Notes:
1669    This object is creating utilizing a coloring provided by the `MatColoring` object or `DMCreateColoring()`
1670 
1671    The `SNES` option `-snes_fd_coloring` will cause the Jacobian needed by `SNES` to be computed via a use of this object
1672 
1673 .seealso: [](ch_matrices), `Mat`, `MatFDColoringCreate()`, `MatFDColoringSetFunction()`, `MatColoring`, `DMCreateColoring()`
1674 S*/
1675 typedef struct _p_MatFDColoring *MatFDColoring;
1676 
1677 PETSC_EXTERN PetscErrorCode MatFDColoringCreate(Mat, ISColoring, MatFDColoring *);
1678 PETSC_EXTERN PetscErrorCode MatFDColoringDestroy(MatFDColoring *);
1679 PETSC_EXTERN PetscErrorCode MatFDColoringView(MatFDColoring, PetscViewer);
1680 PETSC_EXTERN PetscErrorCode MatFDColoringSetFunction(MatFDColoring, PetscErrorCode (*)(void), void *);
1681 PETSC_EXTERN PetscErrorCode MatFDColoringGetFunction(MatFDColoring, PetscErrorCode (**)(void), void **);
1682 PETSC_EXTERN PetscErrorCode MatFDColoringSetParameters(MatFDColoring, PetscReal, PetscReal);
1683 PETSC_EXTERN PetscErrorCode MatFDColoringSetFromOptions(MatFDColoring);
1684 PETSC_EXTERN PetscErrorCode MatFDColoringApply(Mat, MatFDColoring, Vec, void *);
1685 PETSC_EXTERN PetscErrorCode MatFDColoringSetF(MatFDColoring, Vec);
1686 PETSC_EXTERN PetscErrorCode MatFDColoringGetPerturbedColumns(MatFDColoring, PetscInt *, const PetscInt *[]);
1687 PETSC_EXTERN PetscErrorCode MatFDColoringSetUp(Mat, ISColoring, MatFDColoring);
1688 PETSC_EXTERN PetscErrorCode MatFDColoringSetBlockSize(MatFDColoring, PetscInt, PetscInt);
1689 PETSC_EXTERN PetscErrorCode MatFDColoringSetValues(Mat, MatFDColoring, const PetscScalar *);
1690 
1691 /*S
1692      MatTransposeColoring - Object for computing a sparse matrix product C=A*B^T via coloring
1693 
1694    Level: developer
1695 
1696 .seealso: [](ch_matrices), `Mat`, `MatProductType`, `MatTransposeColoringCreate()`
1697 S*/
1698 typedef struct _p_MatTransposeColoring *MatTransposeColoring;
1699 
1700 PETSC_EXTERN PetscErrorCode MatTransposeColoringCreate(Mat, ISColoring, MatTransposeColoring *);
1701 PETSC_EXTERN PetscErrorCode MatTransColoringApplySpToDen(MatTransposeColoring, Mat, Mat);
1702 PETSC_EXTERN PetscErrorCode MatTransColoringApplyDenToSp(MatTransposeColoring, Mat, Mat);
1703 PETSC_EXTERN PetscErrorCode MatTransposeColoringDestroy(MatTransposeColoring *);
1704 
1705 /*S
1706      MatPartitioning - Object for managing the partitioning of a matrix or graph
1707 
1708    Level: beginner
1709 
1710    Note:
1711      There is also a `PetscPartitioner` object that provides the same functionality. It can utilize the `MatPartitioning` operations
1712      via `PetscPartitionerSetType`(p,`PETSCPARTITIONERMATPARTITIONING`)
1713 
1714    Developers Note:
1715      It is an extra maintenance and documentation cost to have two objects with the same functionality. `PetscPartitioner` should be removed
1716 
1717 .seealso: [](ch_matrices), [](sec_graph), `Mat`, `MatPartitioningCreate()`, `MatPartitioningType`, `MatColoring`, `MatGetOrdering()`, `MatOrderingType`,
1718           `MatCoarsenType`, `MatCoarsenType`
1719 S*/
1720 typedef struct _p_MatPartitioning *MatPartitioning;
1721 
1722 /*J
1723     MatPartitioningType - String with the name of a PETSc matrix partitioning
1724 
1725    Level: beginner
1726 dm
1727 .seealso: [](ch_matrices), [](sec_graph), `Mat`, `MatPartitioningCreate()`, `MatPartitioning`, `MatPartitioningSetType()`, `MatColoringType`, `MatOrderingType`,
1728           `MatCoarsenType`, `MatCoarsenType`
1729 J*/
1730 typedef const char *MatPartitioningType;
1731 #define MATPARTITIONINGCURRENT  "current"
1732 #define MATPARTITIONINGAVERAGE  "average"
1733 #define MATPARTITIONINGSQUARE   "square"
1734 #define MATPARTITIONINGPARMETIS "parmetis"
1735 #define MATPARTITIONINGCHACO    "chaco"
1736 #define MATPARTITIONINGPARTY    "party"
1737 #define MATPARTITIONINGPTSCOTCH "ptscotch"
1738 #define MATPARTITIONINGHIERARCH "hierarch"
1739 
1740 PETSC_EXTERN PetscErrorCode MatPartitioningCreate(MPI_Comm, MatPartitioning *);
1741 PETSC_EXTERN PetscErrorCode MatPartitioningSetType(MatPartitioning, MatPartitioningType);
1742 PETSC_EXTERN PetscErrorCode MatPartitioningSetNParts(MatPartitioning, PetscInt);
1743 PETSC_EXTERN PetscErrorCode MatPartitioningSetAdjacency(MatPartitioning, Mat);
1744 PETSC_EXTERN PetscErrorCode MatPartitioningSetNumberVertexWeights(MatPartitioning, PetscInt);
1745 PETSC_EXTERN PetscErrorCode MatPartitioningSetVertexWeights(MatPartitioning, const PetscInt[]);
1746 PETSC_EXTERN PetscErrorCode MatPartitioningSetPartitionWeights(MatPartitioning, const PetscReal[]);
1747 PETSC_EXTERN PetscErrorCode MatPartitioningSetUseEdgeWeights(MatPartitioning, PetscBool);
1748 PETSC_EXTERN PetscErrorCode MatPartitioningGetUseEdgeWeights(MatPartitioning, PetscBool *);
1749 PETSC_EXTERN PetscErrorCode MatPartitioningApply(MatPartitioning, IS *);
1750 PETSC_EXTERN PetscErrorCode MatPartitioningImprove(MatPartitioning, IS *);
1751 PETSC_EXTERN PetscErrorCode MatPartitioningViewImbalance(MatPartitioning, IS);
1752 PETSC_EXTERN PetscErrorCode MatPartitioningApplyND(MatPartitioning, IS *);
1753 PETSC_EXTERN PetscErrorCode MatPartitioningDestroy(MatPartitioning *);
1754 PETSC_EXTERN PetscErrorCode MatPartitioningRegister(const char[], PetscErrorCode (*)(MatPartitioning));
1755 PETSC_EXTERN PetscErrorCode MatPartitioningView(MatPartitioning, PetscViewer);
1756 PETSC_EXTERN PetscErrorCode MatPartitioningViewFromOptions(MatPartitioning, PetscObject, const char[]);
1757 PETSC_EXTERN PetscErrorCode MatPartitioningSetFromOptions(MatPartitioning);
1758 PETSC_EXTERN PetscErrorCode MatPartitioningGetType(MatPartitioning, MatPartitioningType *);
1759 
1760 PETSC_EXTERN PetscErrorCode MatPartitioningParmetisSetRepartition(MatPartitioning part);
1761 PETSC_EXTERN PetscErrorCode MatPartitioningParmetisSetCoarseSequential(MatPartitioning);
1762 PETSC_EXTERN PetscErrorCode MatPartitioningParmetisGetEdgeCut(MatPartitioning, PetscInt *);
1763 
1764 typedef enum {
1765   MP_CHACO_MULTILEVEL = 1,
1766   MP_CHACO_SPECTRAL   = 2,
1767   MP_CHACO_LINEAR     = 4,
1768   MP_CHACO_RANDOM     = 5,
1769   MP_CHACO_SCATTERED  = 6
1770 } MPChacoGlobalType;
1771 PETSC_EXTERN const char *const MPChacoGlobalTypes[];
1772 typedef enum {
1773   MP_CHACO_KERNIGHAN = 1,
1774   MP_CHACO_NONE      = 2
1775 } MPChacoLocalType;
1776 PETSC_EXTERN const char *const MPChacoLocalTypes[];
1777 typedef enum {
1778   MP_CHACO_LANCZOS = 0,
1779   MP_CHACO_RQI     = 1
1780 } MPChacoEigenType;
1781 PETSC_EXTERN const char *const MPChacoEigenTypes[];
1782 
1783 PETSC_EXTERN PetscErrorCode MatPartitioningChacoSetGlobal(MatPartitioning, MPChacoGlobalType);
1784 PETSC_EXTERN PetscErrorCode MatPartitioningChacoGetGlobal(MatPartitioning, MPChacoGlobalType *);
1785 PETSC_EXTERN PetscErrorCode MatPartitioningChacoSetLocal(MatPartitioning, MPChacoLocalType);
1786 PETSC_EXTERN PetscErrorCode MatPartitioningChacoGetLocal(MatPartitioning, MPChacoLocalType *);
1787 PETSC_EXTERN PetscErrorCode MatPartitioningChacoSetCoarseLevel(MatPartitioning, PetscReal);
1788 PETSC_EXTERN PetscErrorCode MatPartitioningChacoSetEigenSolver(MatPartitioning, MPChacoEigenType);
1789 PETSC_EXTERN PetscErrorCode MatPartitioningChacoGetEigenSolver(MatPartitioning, MPChacoEigenType *);
1790 PETSC_EXTERN PetscErrorCode MatPartitioningChacoSetEigenTol(MatPartitioning, PetscReal);
1791 PETSC_EXTERN PetscErrorCode MatPartitioningChacoGetEigenTol(MatPartitioning, PetscReal *);
1792 PETSC_EXTERN PetscErrorCode MatPartitioningChacoSetEigenNumber(MatPartitioning, PetscInt);
1793 PETSC_EXTERN PetscErrorCode MatPartitioningChacoGetEigenNumber(MatPartitioning, PetscInt *);
1794 
1795 #define MP_PARTY_OPT "opt"
1796 #define MP_PARTY_LIN "lin"
1797 #define MP_PARTY_SCA "sca"
1798 #define MP_PARTY_RAN "ran"
1799 #define MP_PARTY_GBF "gbf"
1800 #define MP_PARTY_GCF "gcf"
1801 #define MP_PARTY_BUB "bub"
1802 #define MP_PARTY_DEF "def"
1803 PETSC_EXTERN PetscErrorCode MatPartitioningPartySetGlobal(MatPartitioning, const char *);
1804 #define MP_PARTY_HELPFUL_SETS  "hs"
1805 #define MP_PARTY_KERNIGHAN_LIN "kl"
1806 #define MP_PARTY_NONE          "no"
1807 PETSC_EXTERN PetscErrorCode MatPartitioningPartySetLocal(MatPartitioning, const char *);
1808 PETSC_EXTERN PetscErrorCode MatPartitioningPartySetCoarseLevel(MatPartitioning, PetscReal);
1809 PETSC_EXTERN PetscErrorCode MatPartitioningPartySetBipart(MatPartitioning, PetscBool);
1810 PETSC_EXTERN PetscErrorCode MatPartitioningPartySetMatchOptimization(MatPartitioning, PetscBool);
1811 
1812 typedef enum {
1813   MP_PTSCOTCH_DEFAULT,
1814   MP_PTSCOTCH_QUALITY,
1815   MP_PTSCOTCH_SPEED,
1816   MP_PTSCOTCH_BALANCE,
1817   MP_PTSCOTCH_SAFETY,
1818   MP_PTSCOTCH_SCALABILITY
1819 } MPPTScotchStrategyType;
1820 PETSC_EXTERN const char *const MPPTScotchStrategyTypes[];
1821 
1822 PETSC_EXTERN PetscErrorCode MatPartitioningPTScotchSetImbalance(MatPartitioning, PetscReal);
1823 PETSC_EXTERN PetscErrorCode MatPartitioningPTScotchGetImbalance(MatPartitioning, PetscReal *);
1824 PETSC_EXTERN PetscErrorCode MatPartitioningPTScotchSetStrategy(MatPartitioning, MPPTScotchStrategyType);
1825 PETSC_EXTERN PetscErrorCode MatPartitioningPTScotchGetStrategy(MatPartitioning, MPPTScotchStrategyType *);
1826 
1827 /*
1828  * hierarchical partitioning
1829  */
1830 PETSC_EXTERN PetscErrorCode MatPartitioningHierarchicalGetFineparts(MatPartitioning, IS *);
1831 PETSC_EXTERN PetscErrorCode MatPartitioningHierarchicalGetCoarseparts(MatPartitioning, IS *);
1832 PETSC_EXTERN PetscErrorCode MatPartitioningHierarchicalSetNcoarseparts(MatPartitioning, PetscInt);
1833 PETSC_EXTERN PetscErrorCode MatPartitioningHierarchicalSetNfineparts(MatPartitioning, PetscInt);
1834 
1835 PETSC_EXTERN PetscErrorCode MatMeshToCellGraph(Mat, PetscInt, Mat *);
1836 
1837 /*
1838     If you add entries here you must also add them to src/mat/f90-mod/petscmat.h
1839     If any of the enum values are changed, also update dMatOps dict at src/binding/petsc4py/src/libpetsc4py/libpetsc4py.pyx
1840 */
1841 typedef enum {
1842   MATOP_SET_VALUES               = 0,
1843   MATOP_GET_ROW                  = 1,
1844   MATOP_RESTORE_ROW              = 2,
1845   MATOP_MULT                     = 3,
1846   MATOP_MULT_ADD                 = 4,
1847   MATOP_MULT_TRANSPOSE           = 5,
1848   MATOP_MULT_TRANSPOSE_ADD       = 6,
1849   MATOP_SOLVE                    = 7,
1850   MATOP_SOLVE_ADD                = 8,
1851   MATOP_SOLVE_TRANSPOSE          = 9,
1852   MATOP_SOLVE_TRANSPOSE_ADD      = 10,
1853   MATOP_LUFACTOR                 = 11,
1854   MATOP_CHOLESKYFACTOR           = 12,
1855   MATOP_SOR                      = 13,
1856   MATOP_TRANSPOSE                = 14,
1857   MATOP_GETINFO                  = 15,
1858   MATOP_EQUAL                    = 16,
1859   MATOP_GET_DIAGONAL             = 17,
1860   MATOP_DIAGONAL_SCALE           = 18,
1861   MATOP_NORM                     = 19,
1862   MATOP_ASSEMBLY_BEGIN           = 20,
1863   MATOP_ASSEMBLY_END             = 21,
1864   MATOP_SET_OPTION               = 22,
1865   MATOP_ZERO_ENTRIES             = 23,
1866   MATOP_ZERO_ROWS                = 24,
1867   MATOP_LUFACTOR_SYMBOLIC        = 25,
1868   MATOP_LUFACTOR_NUMERIC         = 26,
1869   MATOP_CHOLESKY_FACTOR_SYMBOLIC = 27,
1870   MATOP_CHOLESKY_FACTOR_NUMERIC  = 28,
1871   MATOP_SETUP                    = 29,
1872   MATOP_ILUFACTOR_SYMBOLIC       = 30,
1873   MATOP_ICCFACTOR_SYMBOLIC       = 31,
1874   MATOP_GET_DIAGONAL_BLOCK       = 32,
1875   MATOP_SET_INF                  = 33,
1876   MATOP_DUPLICATE                = 34,
1877   MATOP_FORWARD_SOLVE            = 35,
1878   MATOP_BACKWARD_SOLVE           = 36,
1879   MATOP_ILUFACTOR                = 37,
1880   MATOP_ICCFACTOR                = 38,
1881   MATOP_AXPY                     = 39,
1882   MATOP_CREATE_SUBMATRICES       = 40,
1883   MATOP_INCREASE_OVERLAP         = 41,
1884   MATOP_GET_VALUES               = 42,
1885   MATOP_COPY                     = 43,
1886   MATOP_GET_ROW_MAX              = 44,
1887   MATOP_SCALE                    = 45,
1888   MATOP_SHIFT                    = 46,
1889   MATOP_DIAGONAL_SET             = 47,
1890   MATOP_ZERO_ROWS_COLUMNS        = 48,
1891   MATOP_SET_RANDOM               = 49,
1892   MATOP_GET_ROW_IJ               = 50,
1893   MATOP_RESTORE_ROW_IJ           = 51,
1894   MATOP_GET_COLUMN_IJ            = 52,
1895   MATOP_RESTORE_COLUMN_IJ        = 53,
1896   MATOP_FDCOLORING_CREATE        = 54,
1897   MATOP_COLORING_PATCH           = 55,
1898   MATOP_SET_UNFACTORED           = 56,
1899   MATOP_PERMUTE                  = 57,
1900   MATOP_SET_VALUES_BLOCKED       = 58,
1901   MATOP_CREATE_SUBMATRIX         = 59,
1902   MATOP_DESTROY                  = 60,
1903   MATOP_VIEW                     = 61,
1904   MATOP_CONVERT_FROM             = 62,
1905   /* MATOP_PLACEHOLDER_63=63 */
1906   MATOP_MATMAT_MULT_SYMBOLIC    = 64,
1907   MATOP_MATMAT_MULT_NUMERIC     = 65,
1908   MATOP_SET_LOCAL_TO_GLOBAL_MAP = 66,
1909   MATOP_SET_VALUES_LOCAL        = 67,
1910   MATOP_ZERO_ROWS_LOCAL         = 68,
1911   MATOP_GET_ROW_MAX_ABS         = 69,
1912   MATOP_GET_ROW_MIN_ABS         = 70,
1913   MATOP_CONVERT                 = 71,
1914   MATOP_HAS_OPERATION           = 72,
1915   /* MATOP_PLACEHOLDER_73=73, */
1916   MATOP_SET_VALUES_ADIFOR = 74,
1917   MATOP_FD_COLORING_APPLY = 75,
1918   MATOP_SET_FROM_OPTIONS  = 76,
1919   /* MATOP_PLACEHOLDER_77=77, */
1920   /* MATOP_PLACEHOLDER_78=78, */
1921   MATOP_FIND_ZERO_DIAGONALS       = 79,
1922   MATOP_MULT_MULTIPLE             = 80,
1923   MATOP_SOLVE_MULTIPLE            = 81,
1924   MATOP_GET_INERTIA               = 82,
1925   MATOP_LOAD                      = 83,
1926   MATOP_IS_SYMMETRIC              = 84,
1927   MATOP_IS_HERMITIAN              = 85,
1928   MATOP_IS_STRUCTURALLY_SYMMETRIC = 86,
1929   MATOP_SET_VALUES_BLOCKEDLOCAL   = 87,
1930   MATOP_CREATE_VECS               = 88,
1931   /* MATOP_PLACEHOLDER_89=89, */
1932   MATOP_MAT_MULT_SYMBOLIC = 90,
1933   MATOP_MAT_MULT_NUMERIC  = 91,
1934   /* MATOP_PLACEHOLDER_92=92, */
1935   MATOP_PTAP_SYMBOLIC = 93,
1936   MATOP_PTAP_NUMERIC  = 94,
1937   /* MATOP_PLACEHOLDER_95=95, */
1938   MATOP_MAT_TRANSPOSE_MULT_SYMBO = 96,
1939   MATOP_MAT_TRANSPOSE_MULT_NUMER = 97,
1940   MATOP_BIND_TO_CPU              = 98,
1941   MATOP_PRODUCTSETFROMOPTIONS    = 99,
1942   MATOP_PRODUCTSYMBOLIC          = 100,
1943   MATOP_PRODUCTNUMERIC           = 101,
1944   MATOP_CONJUGATE                = 102,
1945   MATOP_VIEW_NATIVE              = 103,
1946   MATOP_SET_VALUES_ROW           = 104,
1947   MATOP_REAL_PART                = 105,
1948   MATOP_IMAGINARY_PART           = 106,
1949   MATOP_GET_ROW_UPPER_TRIANGULAR = 107,
1950   MATOP_RESTORE_ROW_UPPER_TRIANG = 108,
1951   MATOP_MAT_SOLVE                = 109,
1952   MATOP_MAT_SOLVE_TRANSPOSE      = 110,
1953   MATOP_GET_ROW_MIN              = 111,
1954   MATOP_GET_COLUMN_VECTOR        = 112,
1955   MATOP_MISSING_DIAGONAL         = 113,
1956   MATOP_GET_SEQ_NONZERO_STRUCTUR = 114,
1957   MATOP_CREATE                   = 115,
1958   MATOP_GET_GHOSTS               = 116,
1959   MATOP_GET_LOCAL_SUB_MATRIX     = 117,
1960   MATOP_RESTORE_LOCALSUB_MATRIX  = 118,
1961   MATOP_MULT_DIAGONAL_BLOCK      = 119,
1962   MATOP_HERMITIAN_TRANSPOSE      = 120,
1963   MATOP_MULT_HERMITIAN_TRANSPOSE = 121,
1964   MATOP_MULT_HERMITIAN_TRANS_ADD = 122,
1965   MATOP_GET_MULTI_PROC_BLOCK     = 123,
1966   MATOP_FIND_NONZERO_ROWS        = 124,
1967   MATOP_GET_COLUMN_NORMS         = 125,
1968   MATOP_INVERT_BLOCK_DIAGONAL    = 126,
1969   MATOP_INVERT_VBLOCK_DIAGONAL   = 127,
1970   MATOP_CREATE_SUB_MATRICES_MPI  = 128,
1971   MATOP_SET_VALUES_BATCH         = 129,
1972   /* MATOP_PLACEHOLDER_130=130, */
1973   MATOP_TRANSPOSE_MAT_MULT_SYMBO = 131,
1974   MATOP_TRANSPOSE_MAT_MULT_NUMER = 132,
1975   MATOP_TRANSPOSE_COLORING_CREAT = 133,
1976   MATOP_TRANS_COLORING_APPLY_SPT = 134,
1977   MATOP_TRANS_COLORING_APPLY_DEN = 135,
1978   /* MATOP_PLACEHOLDER_136=136, */
1979   MATOP_RART_SYMBOLIC         = 137,
1980   MATOP_RART_NUMERIC          = 138,
1981   MATOP_SET_BLOCK_SIZES       = 139,
1982   MATOP_AYPX                  = 140,
1983   MATOP_RESIDUAL              = 141,
1984   MATOP_FDCOLORING_SETUP      = 142,
1985   MATOP_FIND_OFFBLOCK_ENTRIES = 143,
1986   MATOP_MPICONCATENATESEQ     = 144,
1987   MATOP_DESTROYSUBMATRICES    = 145,
1988   MATOP_TRANSPOSE_SOLVE       = 146,
1989   MATOP_GET_VALUES_LOCAL      = 147
1990 } MatOperation;
1991 PETSC_EXTERN PetscErrorCode MatSetOperation(Mat, MatOperation, void (*)(void));
1992 PETSC_EXTERN PetscErrorCode MatGetOperation(Mat, MatOperation, void (**)(void));
1993 PETSC_EXTERN PetscErrorCode MatHasOperation(Mat, MatOperation, PetscBool *);
1994 PETSC_EXTERN PetscErrorCode MatHasCongruentLayouts(Mat, PetscBool *);
1995 PETSC_DEPRECATED_FUNCTION("Use MatProductClear() (since version 3.14)") static inline PetscErrorCode MatFreeIntermediateDataStructures(Mat A)
1996 {
1997   return MatProductClear(A);
1998 }
1999 PETSC_EXTERN PetscErrorCode MatShellSetOperation(Mat, MatOperation, void (*)(void));
2000 PETSC_EXTERN PetscErrorCode MatShellGetOperation(Mat, MatOperation, void (**)(void));
2001 PETSC_EXTERN PetscErrorCode MatShellSetContext(Mat, void *);
2002 PETSC_EXTERN PetscErrorCode MatShellSetContextDestroy(Mat, PetscErrorCode (*)(void *));
2003 PETSC_EXTERN PetscErrorCode MatShellSetVecType(Mat, VecType);
2004 PETSC_EXTERN PetscErrorCode MatShellTestMult(Mat, PetscErrorCode (*)(void *, Vec, Vec), Vec, void *, PetscBool *);
2005 PETSC_EXTERN PetscErrorCode MatShellTestMultTranspose(Mat, PetscErrorCode (*)(void *, Vec, Vec), Vec, void *, PetscBool *);
2006 PETSC_EXTERN PetscErrorCode MatShellSetManageScalingShifts(Mat);
2007 PETSC_EXTERN PetscErrorCode MatShellSetMatProductOperation(Mat, MatProductType, PetscErrorCode (*)(Mat, Mat, Mat, void **), PetscErrorCode (*)(Mat, Mat, Mat, void *), PetscErrorCode (*)(void *), MatType, MatType);
2008 PETSC_EXTERN PetscErrorCode MatIsShell(Mat, PetscBool *);
2009 
2010 /*
2011    Codes for matrices stored on disk. By default they are
2012    stored in a universal format. By changing the format with
2013    PetscViewerPushFormat(viewer,PETSC_VIEWER_NATIVE); the matrices will
2014    be stored in a way natural for the matrix, for example dense matrices
2015    would be stored as dense. Matrices stored this way may only be
2016    read into matrices of the same type.
2017 */
2018 #define MATRIX_BINARY_FORMAT_DENSE -1
2019 
2020 PETSC_EXTERN PetscErrorCode MatMPIBAIJSetHashTableFactor(Mat, PetscReal);
2021 
2022 PETSC_EXTERN PetscErrorCode MatISSetLocalMatType(Mat, MatType);
2023 PETSC_EXTERN PetscErrorCode MatISSetPreallocation(Mat, PetscInt, const PetscInt[], PetscInt, const PetscInt[]);
2024 PETSC_EXTERN PetscErrorCode MatISStoreL2L(Mat, PetscBool);
2025 PETSC_EXTERN PetscErrorCode MatISFixLocalEmpty(Mat, PetscBool);
2026 PETSC_EXTERN PetscErrorCode MatISGetLocalMat(Mat, Mat *);
2027 PETSC_EXTERN PetscErrorCode MatISRestoreLocalMat(Mat, Mat *);
2028 PETSC_EXTERN PetscErrorCode MatISSetLocalMat(Mat, Mat);
2029 PETSC_EXTERN PetscErrorCode MatISGetLocalToGlobalMapping(Mat, ISLocalToGlobalMapping *, ISLocalToGlobalMapping *);
2030 PETSC_EXTERN                PETSC_DEPRECATED_FUNCTION("Use the MatConvert() interface (since version 3.10)") PetscErrorCode MatISGetMPIXAIJ(Mat, MatReuse, Mat *);
2031 
2032 /*S
2033      MatNullSpace - Object that removes a null space from a vector, i.e.
2034          orthogonalizes the vector to a subspace
2035 
2036    Level: advanced
2037 
2038 .seealso: [](ch_matrices), `Mat`, `MatNullSpaceCreate()`, `MatNullSpaceSetFunction()`, `MatGetNullSpace()`, `MatSetNullSpace()`
2039 S*/
2040 typedef struct _p_MatNullSpace *MatNullSpace;
2041 
2042 PETSC_EXTERN PetscErrorCode MatNullSpaceCreate(MPI_Comm, PetscBool, PetscInt, const Vec[], MatNullSpace *);
2043 PETSC_EXTERN PetscErrorCode MatNullSpaceSetFunction(MatNullSpace, PetscErrorCode (*)(MatNullSpace, Vec, void *), void *);
2044 PETSC_EXTERN PetscErrorCode MatNullSpaceDestroy(MatNullSpace *);
2045 PETSC_EXTERN PetscErrorCode MatNullSpaceRemove(MatNullSpace, Vec);
2046 PETSC_EXTERN PetscErrorCode MatGetNullSpace(Mat, MatNullSpace *);
2047 PETSC_EXTERN PetscErrorCode MatGetTransposeNullSpace(Mat, MatNullSpace *);
2048 PETSC_EXTERN PetscErrorCode MatSetTransposeNullSpace(Mat, MatNullSpace);
2049 PETSC_EXTERN PetscErrorCode MatSetNullSpace(Mat, MatNullSpace);
2050 PETSC_EXTERN PetscErrorCode MatSetNearNullSpace(Mat, MatNullSpace);
2051 PETSC_EXTERN PetscErrorCode MatGetNearNullSpace(Mat, MatNullSpace *);
2052 PETSC_EXTERN PetscErrorCode MatNullSpaceTest(MatNullSpace, Mat, PetscBool *);
2053 PETSC_EXTERN PetscErrorCode MatNullSpaceView(MatNullSpace, PetscViewer);
2054 PETSC_EXTERN PetscErrorCode MatNullSpaceGetVecs(MatNullSpace, PetscBool *, PetscInt *, const Vec **);
2055 PETSC_EXTERN PetscErrorCode MatNullSpaceCreateRigidBody(Vec, MatNullSpace *);
2056 
2057 PETSC_EXTERN PetscErrorCode MatReorderingSeqSBAIJ(Mat, IS);
2058 PETSC_EXTERN PetscErrorCode MatMPISBAIJSetHashTableFactor(Mat, PetscReal);
2059 PETSC_EXTERN PetscErrorCode MatSeqSBAIJSetColumnIndices(Mat, PetscInt *);
2060 
2061 PETSC_EXTERN PetscErrorCode MatCreateMAIJ(Mat, PetscInt, Mat *);
2062 PETSC_EXTERN PetscErrorCode MatMAIJRedimension(Mat, PetscInt, Mat *);
2063 PETSC_EXTERN PetscErrorCode MatMAIJGetAIJ(Mat, Mat *);
2064 
2065 PETSC_EXTERN PetscErrorCode MatComputeOperator(Mat, MatType, Mat *);
2066 PETSC_EXTERN PetscErrorCode MatComputeOperatorTranspose(Mat, MatType, Mat *);
2067 
2068 PETSC_DEPRECATED_FUNCTION("Use MatComputeOperator() (since version 3.12)") static inline PetscErrorCode MatComputeExplicitOperator(Mat A, Mat *B)
2069 {
2070   return MatComputeOperator(A, PETSC_NULLPTR, B);
2071 }
2072 PETSC_DEPRECATED_FUNCTION("Use MatComputeOperatorTranspose() (since version 3.12)") static inline PetscErrorCode MatComputeExplicitOperatorTranspose(Mat A, Mat *B)
2073 {
2074   return MatComputeOperatorTranspose(A, PETSC_NULLPTR, B);
2075 }
2076 
2077 PETSC_EXTERN PetscErrorCode MatCreateKAIJ(Mat, PetscInt, PetscInt, const PetscScalar[], const PetscScalar[], Mat *);
2078 PETSC_EXTERN PetscErrorCode MatKAIJGetAIJ(Mat, Mat *);
2079 PETSC_EXTERN PetscErrorCode MatKAIJGetS(Mat, PetscInt *, PetscInt *, PetscScalar **);
2080 PETSC_EXTERN PetscErrorCode MatKAIJGetSRead(Mat, PetscInt *, PetscInt *, const PetscScalar **);
2081 PETSC_EXTERN PetscErrorCode MatKAIJRestoreS(Mat, PetscScalar **);
2082 PETSC_EXTERN PetscErrorCode MatKAIJRestoreSRead(Mat, const PetscScalar **);
2083 PETSC_EXTERN PetscErrorCode MatKAIJGetT(Mat, PetscInt *, PetscInt *, PetscScalar **);
2084 PETSC_EXTERN PetscErrorCode MatKAIJGetTRead(Mat, PetscInt *, PetscInt *, const PetscScalar **);
2085 PETSC_EXTERN PetscErrorCode MatKAIJRestoreT(Mat, PetscScalar **);
2086 PETSC_EXTERN PetscErrorCode MatKAIJRestoreTRead(Mat, const PetscScalar **);
2087 PETSC_EXTERN PetscErrorCode MatKAIJSetAIJ(Mat, Mat);
2088 PETSC_EXTERN PetscErrorCode MatKAIJSetS(Mat, PetscInt, PetscInt, const PetscScalar[]);
2089 PETSC_EXTERN PetscErrorCode MatKAIJSetT(Mat, PetscInt, PetscInt, const PetscScalar[]);
2090 PETSC_EXTERN PetscErrorCode MatKAIJGetScaledIdentity(Mat, PetscBool *);
2091 
2092 PETSC_EXTERN PetscErrorCode MatDiagonalScaleLocal(Mat, Vec);
2093 
2094 PETSC_EXTERN PetscErrorCode MatCreateMFFD(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, Mat *);
2095 PETSC_EXTERN PetscErrorCode MatMFFDSetBase(Mat, Vec, Vec);
2096 PETSC_EXTERN PetscErrorCode MatMFFDSetFunction(Mat, PetscErrorCode (*)(void *, Vec, Vec), void *);
2097 PETSC_EXTERN PetscErrorCode MatMFFDSetFunctioni(Mat, PetscErrorCode (*)(void *, PetscInt, Vec, PetscScalar *));
2098 PETSC_EXTERN PetscErrorCode MatMFFDSetFunctioniBase(Mat, PetscErrorCode (*)(void *, Vec));
2099 PETSC_EXTERN PetscErrorCode MatMFFDSetHHistory(Mat, PetscScalar[], PetscInt);
2100 PETSC_EXTERN PetscErrorCode MatMFFDResetHHistory(Mat);
2101 PETSC_EXTERN PetscErrorCode MatMFFDSetFunctionError(Mat, PetscReal);
2102 PETSC_EXTERN PetscErrorCode MatMFFDSetPeriod(Mat, PetscInt);
2103 PETSC_EXTERN PetscErrorCode MatMFFDGetH(Mat, PetscScalar *);
2104 PETSC_EXTERN PetscErrorCode MatMFFDSetOptionsPrefix(Mat, const char[]);
2105 PETSC_EXTERN PetscErrorCode MatMFFDCheckPositivity(void *, Vec, Vec, PetscScalar *);
2106 PETSC_EXTERN PetscErrorCode MatMFFDSetCheckh(Mat, PetscErrorCode (*)(void *, Vec, Vec, PetscScalar *), void *);
2107 
2108 /*S
2109     MatMFFD - A data structured used to manage the computation of the h differencing parameter for matrix-free
2110               Jacobian vector products
2111 
2112     Level: developer
2113 
2114     Notes:
2115     `MATMFFD` is a specific `MatType` which uses the `MatMFFD` data structure
2116 
2117      MatMFFD*() methods actually take the `Mat` as their first argument. Not a `MatMFFD` data structure
2118 
2119     This functionality is often obtained using `MatCreateSNESMF()` or with `SNES` solvers using `-snes_mf` or `-snes_mf_operator`
2120 
2121 .seealso: [](ch_matrices), `MatMFFDType`, `MATMFFD`, `MatCreateMFFD()`, `MatMFFDSetFuction()`, `MatMFFDSetType()`, `MatMFFDRegister()`,
2122           `MatCreateSNESMF()`, `SNES`, `-snes_mf`, `-snes_mf_operator`
2123 S*/
2124 typedef struct _p_MatMFFD *MatMFFD;
2125 
2126 /*J
2127     MatMFFDType - algorithm used to compute the `h` used in computing matrix-vector products via differencing of a function
2128 
2129    Values:
2130 +   `MATMFFD_DS` - an algorithm described by Dennis and Schnabel
2131 -   `MATMFFD_WP` - the Walker-Pernice strategy.
2132 
2133    Level: beginner
2134 
2135 .seealso: [](ch_matrices), `MatMFFDSetType()`, `MatMFFDRegister()`, `MatMFFDSetFunction()`, `MatCreateMFFD()`
2136 J*/
2137 typedef const char *MatMFFDType;
2138 #define MATMFFD_DS "ds"
2139 #define MATMFFD_WP "wp"
2140 
2141 PETSC_EXTERN PetscErrorCode MatMFFDSetType(Mat, MatMFFDType);
2142 PETSC_EXTERN PetscErrorCode MatMFFDRegister(const char[], PetscErrorCode (*)(MatMFFD));
2143 
2144 PETSC_EXTERN PetscErrorCode MatMFFDDSSetUmin(Mat, PetscReal);
2145 PETSC_EXTERN PetscErrorCode MatMFFDWPSetComputeNormU(Mat, PetscBool);
2146 
2147 PETSC_EXTERN PetscErrorCode MatFDColoringSetType(MatFDColoring, MatMFFDType);
2148 
2149 PETSC_EXTERN PetscErrorCode PetscViewerMathematicaPutMatrix(PetscViewer, PetscInt, PetscInt, PetscReal *);
2150 PETSC_EXTERN PetscErrorCode PetscViewerMathematicaPutCSRMatrix(PetscViewer, PetscInt, PetscInt, PetscInt *, PetscInt *, PetscReal *);
2151 
2152 #ifdef PETSC_HAVE_H2OPUS
2153 PETSC_EXTERN_TYPEDEF typedef PetscScalar (*MatH2OpusKernel)(PetscInt, PetscReal[], PetscReal[], void *);
2154 PETSC_EXTERN PetscErrorCode MatCreateH2OpusFromKernel(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, const PetscReal[], PetscBool, MatH2OpusKernel, void *, PetscReal, PetscInt, PetscInt, Mat *);
2155 PETSC_EXTERN PetscErrorCode MatCreateH2OpusFromMat(Mat, PetscInt, const PetscReal[], PetscBool, PetscReal, PetscInt, PetscInt, PetscInt, PetscReal, Mat *);
2156 PETSC_EXTERN PetscErrorCode MatH2OpusSetSamplingMat(Mat, Mat, PetscInt, PetscReal);
2157 PETSC_EXTERN PetscErrorCode MatH2OpusOrthogonalize(Mat);
2158 PETSC_EXTERN PetscErrorCode MatH2OpusCompress(Mat, PetscReal);
2159 PETSC_EXTERN PetscErrorCode MatH2OpusSetNativeMult(Mat, PetscBool);
2160 PETSC_EXTERN PetscErrorCode MatH2OpusGetNativeMult(Mat, PetscBool *);
2161 PETSC_EXTERN PetscErrorCode MatH2OpusGetIndexMap(Mat, IS *);
2162 PETSC_EXTERN PetscErrorCode MatH2OpusMapVec(Mat, PetscBool, Vec, Vec *);
2163 PETSC_EXTERN PetscErrorCode MatH2OpusLowRankUpdate(Mat, Mat, Mat, PetscScalar);
2164 #endif
2165 
2166 #ifdef PETSC_HAVE_HTOOL
2167 PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*MatHtoolKernel)(PetscInt, PetscInt, PetscInt, const PetscInt *, const PetscInt *, PetscScalar *, void *);
2168 PETSC_EXTERN PetscErrorCode MatCreateHtoolFromKernel(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, const PetscReal[], const PetscReal[], MatHtoolKernel, void *, Mat *);
2169 PETSC_EXTERN PetscErrorCode MatHtoolSetKernel(Mat, MatHtoolKernel, void *);
2170 PETSC_EXTERN PetscErrorCode MatHtoolGetPermutationSource(Mat, IS *);
2171 PETSC_EXTERN PetscErrorCode MatHtoolGetPermutationTarget(Mat, IS *);
2172 PETSC_EXTERN PetscErrorCode MatHtoolUsePermutation(Mat, PetscBool);
2173 
2174 /*E
2175      MatHtoolCompressorType - Indicates the type of compressor used by a `MATHTOOL`
2176 
2177     Values:
2178 +   `MAT_HTOOL_COMPRESSOR_SYMPARTIAL_ACA` (default) - symmetric partial adaptive cross approximation
2179 .   `MAT_HTOOL_COMPRESSOR_FULL_ACA` - full adaptive cross approximation
2180 -   `MAT_HTOOL_COMPRESSOR_SVD` - singular value decomposition
2181 
2182    Level: intermediate
2183 
2184 .seealso: [](ch_matrices), `Mat`, `MatCreateHtoolFromKernel()`, `MATHTOOL`, `MatHtoolClusteringType`
2185 E*/
2186 typedef enum {
2187   MAT_HTOOL_COMPRESSOR_SYMPARTIAL_ACA,
2188   MAT_HTOOL_COMPRESSOR_FULL_ACA,
2189   MAT_HTOOL_COMPRESSOR_SVD
2190 } MatHtoolCompressorType;
2191 
2192 /*E
2193      MatHtoolClusteringType - Indicates the type of clustering used by a `MATHTOOL`
2194 
2195     Values:
2196 +   `MAT_HTOOL_CLUSTERING_PCA_REGULAR` (default) - axis computed via principle component analysis, split uniformly
2197 .   `MAT_HTOOL_CLUSTERING_PCA_GEOMETRIC` - axis computed via principle component analysis, split barycentrically
2198 .   `MAT_HTOOL_CLUSTERING_BOUNDING_BOX_1_REGULAR` - axis along the largest extent of the bounding box, split uniformly
2199 -   `MAT_HTOOL_CLUSTERING_BOUNDING_BOX_1_GEOMETRIC` - axis along the largest extent of the bounding box, split barycentrically
2200 
2201    Level: intermediate
2202 
2203     Note:
2204     Higher-dimensional clustering is not yet supported in Htool, but once it is, one should add BOUNDING_BOX_{2,3} types
2205 
2206 .seealso: [](ch_matrices), `Mat`, `MatCreateHtoolFromKernel()`, `MATHTOOL`, `MatHtoolCompressorType`
2207 E*/
2208 typedef enum {
2209   MAT_HTOOL_CLUSTERING_PCA_REGULAR,
2210   MAT_HTOOL_CLUSTERING_PCA_GEOMETRIC,
2211   MAT_HTOOL_CLUSTERING_BOUNDING_BOX_1_REGULAR,
2212   MAT_HTOOL_CLUSTERING_BOUNDING_BOX_1_GEOMETRIC
2213 } MatHtoolClusteringType;
2214 #endif
2215 
2216 #ifdef PETSC_HAVE_MUMPS
2217 PETSC_EXTERN PetscErrorCode MatMumpsSetIcntl(Mat, PetscInt, PetscInt);
2218 PETSC_EXTERN PetscErrorCode MatMumpsGetIcntl(Mat, PetscInt, PetscInt *);
2219 PETSC_EXTERN PetscErrorCode MatMumpsSetCntl(Mat, PetscInt, PetscReal);
2220 PETSC_EXTERN PetscErrorCode MatMumpsGetCntl(Mat, PetscInt, PetscReal *);
2221 
2222 PETSC_EXTERN PetscErrorCode MatMumpsGetInfo(Mat, PetscInt, PetscInt *);
2223 PETSC_EXTERN PetscErrorCode MatMumpsGetInfog(Mat, PetscInt, PetscInt *);
2224 PETSC_EXTERN PetscErrorCode MatMumpsGetRinfo(Mat, PetscInt, PetscReal *);
2225 PETSC_EXTERN PetscErrorCode MatMumpsGetRinfog(Mat, PetscInt, PetscReal *);
2226 PETSC_EXTERN PetscErrorCode MatMumpsGetNullPivots(Mat, PetscInt *, PetscInt **);
2227 PETSC_EXTERN PetscErrorCode MatMumpsGetInverse(Mat, Mat);
2228 PETSC_EXTERN PetscErrorCode MatMumpsGetInverseTranspose(Mat, Mat);
2229 #endif
2230 
2231 #ifdef PETSC_HAVE_MKL_PARDISO
2232 PETSC_EXTERN PetscErrorCode MatMkl_PardisoSetCntl(Mat, PetscInt, PetscInt);
2233 #endif
2234 
2235 #ifdef PETSC_HAVE_MKL_CPARDISO
2236 PETSC_EXTERN PetscErrorCode MatMkl_CPardisoSetCntl(Mat, PetscInt, PetscInt);
2237 #endif
2238 
2239 #ifdef PETSC_HAVE_SUPERLU
2240 PETSC_EXTERN PetscErrorCode MatSuperluSetILUDropTol(Mat, PetscReal);
2241 #endif
2242 
2243 #ifdef PETSC_HAVE_SUPERLU_DIST
2244 PETSC_EXTERN PetscErrorCode MatSuperluDistGetDiagU(Mat, PetscScalar *);
2245 #endif
2246 
2247 #ifdef PETSC_HAVE_STRUMPACK
2248 /*E
2249     MatSTRUMPACKReordering - sparsity reducing ordering to be used in `MATSOLVERSTRUMPACK``
2250 
2251     Values:
2252 +  `MAT_STRUMPACK_NATURAL` - use the current ordering
2253 .  `MAT_STRUMPACK_METIS` - use MeTis to compute an ordering
2254 .  `MAT_STRUMPACK_PARMETIS` - use ParMeTis to compute an ordering
2255 .  `MAT_STRUMPACK_SCOTCH` - use Scotch to compute an ordering
2256 .  `MAT_STRUMPACK_PTSCOTCH` - use parallel Scotch to compute an ordering
2257 -  `MAT_STRUMPACK_RCM` - use an RCM ordering
2258 
2259     Level: intermediate
2260 
2261     Developer Note:
2262     Should be called `MatSTRUMPACKReorderingType`
2263 
2264 .seealso: `Mat`, `MATSOLVERSTRUMPACK`, `MatGetFactor()`, `MatSTRUMPACKSetHSSRelTol()`, `MatSTRUMPACKSetReordering()`
2265 E*/
2266 typedef enum {
2267   MAT_STRUMPACK_NATURAL  = 0,
2268   MAT_STRUMPACK_METIS    = 1,
2269   MAT_STRUMPACK_PARMETIS = 2,
2270   MAT_STRUMPACK_SCOTCH   = 3,
2271   MAT_STRUMPACK_PTSCOTCH = 4,
2272   MAT_STRUMPACK_RCM      = 5
2273 } MatSTRUMPACKReordering;
2274 
2275 PETSC_EXTERN PetscErrorCode MatSTRUMPACKSetReordering(Mat, MatSTRUMPACKReordering);
2276 PETSC_EXTERN PetscErrorCode MatSTRUMPACKSetColPerm(Mat, PetscBool);
2277 PETSC_EXTERN PetscErrorCode MatSTRUMPACKSetHSSRelTol(Mat, PetscReal);
2278 PETSC_DEPRECATED_FUNCTION("Use MatSTRUMPACKSetHSSRelTol() (since version 3.9)") static inline PetscErrorCode MatSTRUMPACKSetHSSRelCompTol(Mat mat, PetscReal rtol)
2279 {
2280   return MatSTRUMPACKSetHSSRelTol(mat, rtol);
2281 }
2282 PETSC_EXTERN PetscErrorCode MatSTRUMPACKSetHSSAbsTol(Mat, PetscReal);
2283 PETSC_EXTERN PetscErrorCode MatSTRUMPACKSetHSSMinSepSize(Mat, PetscInt);
2284 PETSC_DEPRECATED_FUNCTION("Use MatSTRUMPACKSetHSSMinSepSize() (since version 3.9)") static inline PetscErrorCode MatSTRUMPACKSetHSSMinSize(Mat mat, PetscInt hssminsize)
2285 {
2286   return MatSTRUMPACKSetHSSMinSepSize(mat, hssminsize);
2287 }
2288 PETSC_EXTERN PetscErrorCode MatSTRUMPACKSetHSSMaxRank(Mat, PetscInt);
2289 PETSC_EXTERN PetscErrorCode MatSTRUMPACKSetHSSLeafSize(Mat, PetscInt);
2290 #endif
2291 
2292 PETSC_EXTERN PetscErrorCode MatBindToCPU(Mat, PetscBool);
2293 PETSC_EXTERN PetscErrorCode MatBoundToCPU(Mat, PetscBool *);
2294 PETSC_DEPRECATED_FUNCTION("Use MatBindToCPU (since v3.13)") static inline PetscErrorCode MatPinToCPU(Mat A, PetscBool flg)
2295 {
2296   return MatBindToCPU(A, flg);
2297 }
2298 PETSC_EXTERN PetscErrorCode MatSetBindingPropagates(Mat, PetscBool);
2299 PETSC_EXTERN PetscErrorCode MatGetBindingPropagates(Mat, PetscBool *);
2300 
2301 #ifdef PETSC_HAVE_CUDA
2302 /*E
2303     MatCUSPARSEStorageFormat - indicates the storage format for `MATAIJCUSPARSE` (GPU)
2304     matrices.
2305 
2306     Values:
2307 +   `MAT_CUSPARSE_CSR` - Compressed Sparse Row
2308 .   `MAT_CUSPARSE_ELL` - Ellpack (requires CUDA 4.2 or later).
2309 -   `MAT_CUSPARSE_HYB` - Hybrid, a combination of Ellpack and Coordinate format (requires CUDA 4.2 or later).
2310 
2311     Level: intermediate
2312 
2313 .seealso: [](ch_matrices), `MATAIJCUSPARSE`, `MatCUSPARSESetFormat()`, `MatCUSPARSEFormatOperation`
2314 E*/
2315 
2316 typedef enum {
2317   MAT_CUSPARSE_CSR,
2318   MAT_CUSPARSE_ELL,
2319   MAT_CUSPARSE_HYB
2320 } MatCUSPARSEStorageFormat;
2321 
2322 /* these will be strings associated with enumerated type defined above */
2323 PETSC_EXTERN const char *const MatCUSPARSEStorageFormats[];
2324 
2325 /*E
2326     MatCUSPARSEFormatOperation - indicates the operation of `MATAIJCUSPARSE` (GPU)
2327     matrices whose operation should use a particular storage format.
2328 
2329     Values:
2330 +   `MAT_CUSPARSE_MULT_DIAG` - sets the storage format for the diagonal matrix in the parallel MatMult
2331 .   `MAT_CUSPARSE_MULT_OFFDIAG` - sets the storage format for the offdiagonal matrix in the parallel MatMult
2332 .   `MAT_CUSPARSE_MULT` - sets the storage format for the entire matrix in the serial (single GPU) MatMult
2333 -   `MAT_CUSPARSE_ALL` - sets the storage format for all `MATAIJCUSPARSE` (GPU) matrices
2334 
2335     Level: intermediate
2336 
2337 .seealso: [](ch_matrices), `MatCUSPARSESetFormat()`, `MatCUSPARSEStorageFormat`
2338 E*/
2339 typedef enum {
2340   MAT_CUSPARSE_MULT_DIAG,
2341   MAT_CUSPARSE_MULT_OFFDIAG,
2342   MAT_CUSPARSE_MULT,
2343   MAT_CUSPARSE_ALL
2344 } MatCUSPARSEFormatOperation;
2345 
2346 PETSC_EXTERN PetscErrorCode MatCreateSeqAIJCUSPARSE(MPI_Comm, PetscInt, PetscInt, PetscInt, const PetscInt[], Mat *);
2347 PETSC_EXTERN PetscErrorCode MatCreateAIJCUSPARSE(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], PetscInt, const PetscInt[], Mat *);
2348 PETSC_EXTERN PetscErrorCode MatCUSPARSESetFormat(Mat, MatCUSPARSEFormatOperation, MatCUSPARSEStorageFormat);
2349 PETSC_EXTERN PetscErrorCode MatCUSPARSESetUseCPUSolve(Mat, PetscBool);
2350 PETSC_EXTERN PetscErrorCode MatSeqAIJCUSPARSEGetIJ(Mat, PetscBool, const int **, const int **);
2351 PETSC_EXTERN PetscErrorCode MatSeqAIJCUSPARSERestoreIJ(Mat, PetscBool, const int **, const int **);
2352 PETSC_EXTERN PetscErrorCode MatSeqAIJCUSPARSEGetArrayRead(Mat, const PetscScalar **);
2353 PETSC_EXTERN PetscErrorCode MatSeqAIJCUSPARSERestoreArrayRead(Mat, const PetscScalar **);
2354 PETSC_EXTERN PetscErrorCode MatSeqAIJCUSPARSEGetArrayWrite(Mat, PetscScalar **);
2355 PETSC_EXTERN PetscErrorCode MatSeqAIJCUSPARSERestoreArrayWrite(Mat, PetscScalar **);
2356 PETSC_EXTERN PetscErrorCode MatSeqAIJCUSPARSEGetArray(Mat, PetscScalar **);
2357 PETSC_EXTERN PetscErrorCode MatSeqAIJCUSPARSERestoreArray(Mat, PetscScalar **);
2358 
2359 PETSC_EXTERN PetscErrorCode MatCreateDenseCUDA(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscScalar[], Mat *);
2360 PETSC_EXTERN PetscErrorCode MatCreateSeqDenseCUDA(MPI_Comm, PetscInt, PetscInt, PetscScalar[], Mat *);
2361 PETSC_EXTERN PetscErrorCode MatDenseCUDAGetArrayWrite(Mat, PetscScalar **);
2362 PETSC_EXTERN PetscErrorCode MatDenseCUDAGetArrayRead(Mat, const PetscScalar **);
2363 PETSC_EXTERN PetscErrorCode MatDenseCUDAGetArray(Mat, PetscScalar **);
2364 PETSC_EXTERN PetscErrorCode MatDenseCUDARestoreArrayWrite(Mat, PetscScalar **);
2365 PETSC_EXTERN PetscErrorCode MatDenseCUDARestoreArrayRead(Mat, const PetscScalar **);
2366 PETSC_EXTERN PetscErrorCode MatDenseCUDARestoreArray(Mat, PetscScalar **);
2367 PETSC_EXTERN PetscErrorCode MatDenseCUDAPlaceArray(Mat, const PetscScalar *);
2368 PETSC_EXTERN PetscErrorCode MatDenseCUDAReplaceArray(Mat, const PetscScalar *);
2369 PETSC_EXTERN PetscErrorCode MatDenseCUDAResetArray(Mat);
2370 PETSC_EXTERN PetscErrorCode MatDenseCUDASetPreallocation(Mat, PetscScalar *);
2371 
2372 PETSC_EXTERN PetscErrorCode MatCreateSeqSELLCUDA(MPI_Comm, PetscInt, PetscInt, PetscInt, const PetscInt[], Mat *);
2373 PETSC_EXTERN PetscErrorCode MatCreateSELLCUDA(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], PetscInt, const PetscInt[], Mat *);
2374 #endif
2375 
2376 #ifdef PETSC_HAVE_HIP
2377 /*E
2378     MatHIPSPARSEStorageFormat - indicates the storage format for `MATAIJHIPSPARSE` (GPU)
2379     matrices.
2380 
2381     Values:
2382 +   `MAT_HIPSPARSE_CSR` - Compressed Sparse Row
2383 .   `MAT_HIPSPARSE_ELL` - Ellpack
2384 -   `MAT_HIPSPARSE_HYB` - Hybrid, a combination of Ellpack and Coordinate format
2385 
2386     Level: intermediate
2387 
2388 .seealso: [](ch_matrices), `MatHIPSPARSESetFormat()`, `MatHIPSPARSEFormatOperation`
2389 E*/
2390 
2391 typedef enum {
2392   MAT_HIPSPARSE_CSR,
2393   MAT_HIPSPARSE_ELL,
2394   MAT_HIPSPARSE_HYB
2395 } MatHIPSPARSEStorageFormat;
2396 
2397 /* these will be strings associated with enumerated type defined above */
2398 PETSC_EXTERN const char *const MatHIPSPARSEStorageFormats[];
2399 
2400 /*E
2401     MatHIPSPARSEFormatOperation - indicates the operation of `MATAIJHIPSPARSE` (GPU)
2402     matrices whose operation should use a particular storage format.
2403 
2404     Values:
2405 +   `MAT_HIPSPARSE_MULT_DIAG` - sets the storage format for the diagonal matrix in the parallel `MatMult()`
2406 .   `MAT_HIPSPARSE_MULT_OFFDIAG` - sets the storage format for the offdiagonal matrix in the parallel `MatMult()`
2407 .   `MAT_HIPSPARSE_MULT` - sets the storage format for the entire matrix in the serial (single GPU) `MatMult()`
2408 -   `MAT_HIPSPARSE_ALL` - sets the storage format for all HIPSPARSE (GPU) matrices
2409 
2410     Level: intermediate
2411 
2412 .seealso: [](ch_matrices), `MatHIPSPARSESetFormat()`, `MatHIPSPARSEStorageFormat`
2413 E*/
2414 typedef enum {
2415   MAT_HIPSPARSE_MULT_DIAG,
2416   MAT_HIPSPARSE_MULT_OFFDIAG,
2417   MAT_HIPSPARSE_MULT,
2418   MAT_HIPSPARSE_ALL
2419 } MatHIPSPARSEFormatOperation;
2420 
2421 PETSC_EXTERN PetscErrorCode MatCreateSeqAIJHIPSPARSE(MPI_Comm, PetscInt, PetscInt, PetscInt, const PetscInt[], Mat *);
2422 PETSC_EXTERN PetscErrorCode MatCreateAIJHIPSPARSE(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], PetscInt, const PetscInt[], Mat *);
2423 PETSC_EXTERN PetscErrorCode MatHIPSPARSESetFormat(Mat, MatHIPSPARSEFormatOperation, MatHIPSPARSEStorageFormat);
2424 PETSC_EXTERN PetscErrorCode MatHIPSPARSESetUseCPUSolve(Mat, PetscBool);
2425 PETSC_EXTERN PetscErrorCode MatSeqAIJHIPSPARSEGetIJ(Mat, PetscBool, const int **, const int **);
2426 PETSC_EXTERN PetscErrorCode MatSeqAIJHIPSPARSERestoreIJ(Mat, PetscBool, const int **, const int **);
2427 PETSC_EXTERN PetscErrorCode MatSeqAIJHIPSPARSEGetArrayRead(Mat, const PetscScalar **);
2428 PETSC_EXTERN PetscErrorCode MatSeqAIJHIPSPARSERestoreArrayRead(Mat, const PetscScalar **);
2429 PETSC_EXTERN PetscErrorCode MatSeqAIJHIPSPARSEGetArrayWrite(Mat, PetscScalar **);
2430 PETSC_EXTERN PetscErrorCode MatSeqAIJHIPSPARSERestoreArrayWrite(Mat, PetscScalar **);
2431 PETSC_EXTERN PetscErrorCode MatSeqAIJHIPSPARSEGetArray(Mat, PetscScalar **);
2432 PETSC_EXTERN PetscErrorCode MatSeqAIJHIPSPARSERestoreArray(Mat, PetscScalar **);
2433 
2434 PETSC_EXTERN PetscErrorCode MatCreateDenseHIP(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscScalar[], Mat *);
2435 PETSC_EXTERN PetscErrorCode MatCreateSeqDenseHIP(MPI_Comm, PetscInt, PetscInt, PetscScalar[], Mat *);
2436 PETSC_EXTERN PetscErrorCode MatDenseHIPGetArrayWrite(Mat, PetscScalar **);
2437 PETSC_EXTERN PetscErrorCode MatDenseHIPGetArrayRead(Mat, const PetscScalar **);
2438 PETSC_EXTERN PetscErrorCode MatDenseHIPGetArray(Mat, PetscScalar **);
2439 PETSC_EXTERN PetscErrorCode MatDenseHIPRestoreArrayWrite(Mat, PetscScalar **);
2440 PETSC_EXTERN PetscErrorCode MatDenseHIPRestoreArrayRead(Mat, const PetscScalar **);
2441 PETSC_EXTERN PetscErrorCode MatDenseHIPRestoreArray(Mat, PetscScalar **);
2442 PETSC_EXTERN PetscErrorCode MatDenseHIPPlaceArray(Mat, const PetscScalar *);
2443 PETSC_EXTERN PetscErrorCode MatDenseHIPReplaceArray(Mat, const PetscScalar *);
2444 PETSC_EXTERN PetscErrorCode MatDenseHIPResetArray(Mat);
2445 PETSC_EXTERN PetscErrorCode MatDenseHIPSetPreallocation(Mat, PetscScalar *);
2446 #endif
2447 
2448 #if defined(PETSC_HAVE_VIENNACL)
2449 PETSC_EXTERN PetscErrorCode MatCreateSeqAIJViennaCL(MPI_Comm, PetscInt, PetscInt, PetscInt, const PetscInt[], Mat *);
2450 PETSC_EXTERN PetscErrorCode MatCreateAIJViennaCL(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt[], PetscInt, const PetscInt[], Mat *);
2451 #endif
2452 
2453 #if defined(PETSC_HAVE_FFTW)
2454 PETSC_EXTERN PetscErrorCode VecScatterPetscToFFTW(Mat, Vec, Vec);
2455 PETSC_EXTERN PetscErrorCode VecScatterFFTWToPetsc(Mat, Vec, Vec);
2456 PETSC_EXTERN PetscErrorCode MatCreateVecsFFTW(Mat, Vec *, Vec *, Vec *);
2457 #endif
2458 
2459 #if defined(PETSC_HAVE_SCALAPACK)
2460 PETSC_EXTERN PetscErrorCode MatCreateScaLAPACK(MPI_Comm, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, Mat *);
2461 PETSC_EXTERN PetscErrorCode MatScaLAPACKSetBlockSizes(Mat, PetscInt, PetscInt);
2462 PETSC_EXTERN PetscErrorCode MatScaLAPACKGetBlockSizes(Mat, PetscInt *, PetscInt *);
2463 #endif
2464 
2465 PETSC_EXTERN PetscErrorCode MatCreateNest(MPI_Comm, PetscInt, const IS[], PetscInt, const IS[], const Mat[], Mat *);
2466 PETSC_EXTERN PetscErrorCode MatNestGetSize(Mat, PetscInt *, PetscInt *);
2467 PETSC_EXTERN PetscErrorCode MatNestGetISs(Mat, IS[], IS[]);
2468 PETSC_EXTERN PetscErrorCode MatNestGetLocalISs(Mat, IS[], IS[]);
2469 PETSC_EXTERN PetscErrorCode MatNestGetSubMats(Mat, PetscInt *, PetscInt *, Mat ***);
2470 PETSC_EXTERN PetscErrorCode MatNestGetSubMat(Mat, PetscInt, PetscInt, Mat *);
2471 PETSC_EXTERN PetscErrorCode MatNestSetVecType(Mat, VecType);
2472 PETSC_EXTERN PetscErrorCode MatNestSetSubMats(Mat, PetscInt, const IS[], PetscInt, const IS[], const Mat[]);
2473 PETSC_EXTERN PetscErrorCode MatNestSetSubMat(Mat, PetscInt, PetscInt, Mat);
2474 
2475 PETSC_EXTERN PetscErrorCode MatChop(Mat, PetscReal);
2476 PETSC_EXTERN PetscErrorCode MatComputeBandwidth(Mat, PetscReal, PetscInt *);
2477 
2478 PETSC_EXTERN PetscErrorCode MatSubdomainsCreateCoalesce(Mat, PetscInt, PetscInt *, IS **);
2479 
2480 PETSC_EXTERN PetscErrorCode MatPreallocatorPreallocate(Mat, PetscBool, Mat);
2481 
2482 PETSC_INTERN PetscErrorCode MatHeaderMerge(Mat, Mat *);
2483 PETSC_EXTERN PetscErrorCode MatHeaderReplace(Mat, Mat *);
2484 
2485 PETSC_EXTERN PetscErrorCode MatSeqAIJGetCSRAndMemType(Mat, const PetscInt **, const PetscInt **, PetscScalar **, PetscMemType *);
2486 
2487 PETSC_EXTERN PetscErrorCode MatCreateGraph(Mat, PetscBool, PetscBool, PetscReal, Mat *);
2488 PETSC_EXTERN PetscErrorCode MatEliminateZeros(Mat);
2489 
2490 PETSC_EXTERN PetscErrorCode MatCreateDenseFromVecType(MPI_Comm, VecType, PetscInt, PetscInt, PetscInt, PetscInt, PetscInt, PetscScalar *, Mat *);
2491 #endif
2492