xref: /petsc/include/petscsys.h (revision 73fca5a054db3a26b2f92cdffe2dd2b4e924195c)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10d382aafbSBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include
11d382aafbSBarry Smith    in the conf/variables definition of PETSC_INCLUDE
12d382aafbSBarry Smith */
13d382aafbSBarry Smith #include "petscconf.h"
14d382aafbSBarry Smith #include "petscfix.h"
15d382aafbSBarry Smith 
16*73fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
17*73fca5a0SBarry Smith /*
18*73fca5a0SBarry Smith    Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
19*73fca5a0SBarry Smith    We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
20*73fca5a0SBarry Smith */
21*73fca5a0SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L)
22*73fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L
23*73fca5a0SBarry Smith #endif
24*73fca5a0SBarry Smith #if defined(PETSC__BSD_SOURCE)
25*73fca5a0SBarry Smith #define _BSD_SOURCE
26*73fca5a0SBarry Smith #endif
27*73fca5a0SBarry Smith #endif
28*73fca5a0SBarry Smith 
29d382aafbSBarry Smith /* ========================================================================== */
30d382aafbSBarry Smith /*
31d382aafbSBarry Smith    This facilitates using C version of PETSc from C++ and
32e2e64c6bSBarry Smith    C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter)
33d382aafbSBarry Smith */
34d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus)
35d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler"
36d382aafbSBarry Smith #endif
371ec50b02SJed Brown 
381ec50b02SJed Brown #if defined(__cplusplus)
391ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
401ec50b02SJed Brown #else
411ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
421ec50b02SJed Brown #endif
43d382aafbSBarry Smith 
44d382aafbSBarry Smith #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
45d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN extern "C" {
46d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END  }
47d382aafbSBarry Smith #else
48d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN
49d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END
50d382aafbSBarry Smith #endif
51d382aafbSBarry Smith /* ========================================================================== */
52d382aafbSBarry Smith /*
53d382aafbSBarry Smith    Current PETSc version number and release date. Also listed in
54d382aafbSBarry Smith     Web page
55d382aafbSBarry Smith     src/docs/tex/manual/intro.tex,
56d382aafbSBarry Smith     src/docs/tex/manual/manual.tex.
57d382aafbSBarry Smith     src/docs/website/index.html.
58d382aafbSBarry Smith */
59d382aafbSBarry Smith #include "petscversion.h"
60301d30feSBarry Smith #define PETSC_AUTHOR_INFO        "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
61d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1)
62301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \
63d382aafbSBarry Smith                                          PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \
64301d30feSBarry Smith 					 PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE)
65d382aafbSBarry Smith #else
66301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s  HG Date: %s", \
67301d30feSBarry Smith                                         PETSC_VERSION_HG, PETSC_VERSION_DATE_HG)
68d382aafbSBarry Smith #endif
69d382aafbSBarry Smith 
70d382aafbSBarry Smith /*MC
71d382aafbSBarry Smith     PetscGetVersion - Gets the PETSc version information in a string.
72d382aafbSBarry Smith 
73d382aafbSBarry Smith     Input Parameter:
74d382aafbSBarry Smith .   len - length of the string
75d382aafbSBarry Smith 
76d382aafbSBarry Smith     Output Parameter:
77d382aafbSBarry Smith .   version - version string
78d382aafbSBarry Smith 
79d382aafbSBarry Smith     Level: developer
80d382aafbSBarry Smith 
81d382aafbSBarry Smith     Usage:
82d382aafbSBarry Smith     char version[256];
83d382aafbSBarry Smith     ierr = PetscGetVersion(version,256);CHKERRQ(ierr)
84d382aafbSBarry Smith 
85d382aafbSBarry Smith     Fortran Note:
86d382aafbSBarry Smith     This routine is not supported in Fortran.
87d382aafbSBarry Smith 
88d382aafbSBarry Smith .seealso: PetscGetProgramName()
89d382aafbSBarry Smith 
90d382aafbSBarry Smith M*/
91d382aafbSBarry Smith 
92d382aafbSBarry Smith /* ========================================================================== */
93d382aafbSBarry Smith 
94d382aafbSBarry Smith /*
95d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
96d382aafbSBarry Smith 
97d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
98d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
99d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
100d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
101d382aafbSBarry Smith     mpicxx.h directly in their code
102d382aafbSBarry Smith */
103d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1
104d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1
105d382aafbSBarry Smith #include "mpi.h"
10665013866SBarry Smith 
107d382aafbSBarry Smith /*
108d382aafbSBarry Smith     Yuck, we need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
109d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
110d382aafbSBarry Smith 
111d382aafbSBarry Smith     The MPI STANDARD HAS TO BE CHANGED to prevent this nonsense.
112d382aafbSBarry Smith */
113d382aafbSBarry Smith #include <stdio.h>
114d382aafbSBarry Smith 
115d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
116d382aafbSBarry Smith #if !defined(MPIAPI)
117d382aafbSBarry Smith #define MPIAPI
118d382aafbSBarry Smith #endif
119d382aafbSBarry Smith 
120b3506946SBarry Smith 
121d382aafbSBarry Smith /*MC
122d382aafbSBarry Smith     PetscErrorCode - datatype used for return error code from all PETSc functions
123d382aafbSBarry Smith 
124d382aafbSBarry Smith     Level: beginner
125d382aafbSBarry Smith 
126d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
127d382aafbSBarry Smith M*/
128d382aafbSBarry Smith typedef int PetscErrorCode;
129d382aafbSBarry Smith 
130d382aafbSBarry Smith /*MC
131d382aafbSBarry Smith 
132503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
133d382aafbSBarry Smith          (internal integer in the data structure used for error
134d382aafbSBarry Smith          checking). These are all defined by an offset from the lowest
1350700a824SBarry Smith          one, PETSC_SMALLEST_CLASSID.
136d382aafbSBarry Smith 
137d382aafbSBarry Smith     Level: advanced
138d382aafbSBarry Smith 
1390700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
140d382aafbSBarry Smith M*/
1410700a824SBarry Smith typedef int PetscClassId;
142d382aafbSBarry Smith 
143d382aafbSBarry Smith 
144d382aafbSBarry Smith /*MC
145d382aafbSBarry Smith     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
146d382aafbSBarry Smith 
147d382aafbSBarry Smith     Level: intermediate
148d382aafbSBarry Smith 
149d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1503b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
151287e6e24SBarry Smith            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
1523b2a8c54SBarry Smith 
1533b2a8c54SBarry Smith     PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a
1543b2a8c54SBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
1553b2a8c54SBarry Smith 
1563b2a8c54SBarry Smith     PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
1573b2a8c54SBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
158d382aafbSBarry Smith 
159287e6e24SBarry Smith     Developer Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
160287e6e24SBarry Smith      if you run ./configure with the option
161287e6e24SBarry Smith      --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
162287e6e24SBarry Smith      for example, you can change the int below to long int. Since MATLAB uses the MKL (Intel Math Libraries) it is likely one can
163287e6e24SBarry Smith      purchase a 64 bit integer version of the MKL and use that with a  PetscBLASInt of long int.
164287e6e24SBarry Smith 
165287e6e24SBarry Smith      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
166287e6e24SBarry Smith      be used with PETSc if you have set PetscBLASInt to long int.
167287e6e24SBarry Smith 
168d382aafbSBarry Smith .seealso: PetscMPIInt, PetscInt
169d382aafbSBarry Smith 
170d382aafbSBarry Smith M*/
171d382aafbSBarry Smith typedef int PetscBLASInt;
172d382aafbSBarry Smith 
173d382aafbSBarry Smith /*MC
174d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
175d382aafbSBarry Smith 
176d382aafbSBarry Smith     Level: intermediate
177d382aafbSBarry Smith 
178d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1793b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
180d382aafbSBarry Smith 
1813b2a8c54SBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
182d382aafbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
183d382aafbSBarry Smith 
1843b2a8c54SBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
185d382aafbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
186d382aafbSBarry Smith 
187d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt
188d382aafbSBarry Smith 
189d382aafbSBarry Smith M*/
190d382aafbSBarry Smith typedef int PetscMPIInt;
191d382aafbSBarry Smith 
192d382aafbSBarry Smith /*MC
193d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
194d382aafbSBarry Smith 
195d382aafbSBarry Smith     Level: intermediate
196d382aafbSBarry Smith 
197d382aafbSBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
198d382aafbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
199d382aafbSBarry Smith 
200d382aafbSBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
201d382aafbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
202d382aafbSBarry Smith 
203d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
204d382aafbSBarry Smith M*/
205d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
206d382aafbSBarry Smith 
207d382aafbSBarry Smith /*MC
208d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
2093b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
210d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
211d382aafbSBarry Smith 
212d382aafbSBarry Smith    Level: intermediate
213d382aafbSBarry Smith 
214d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
215d382aafbSBarry Smith M*/
216d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
217d382aafbSBarry Smith typedef long long PetscInt;
218d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT
219d382aafbSBarry Smith #else
220d382aafbSBarry Smith typedef int PetscInt;
221d382aafbSBarry Smith #define MPIU_INT MPI_INT
222d382aafbSBarry Smith #endif
223d382aafbSBarry Smith 
22458b60935SBarry Smith /*EC
22558b60935SBarry Smith 
22658b60935SBarry Smith     PetscPrecision - indicates what precision the object is using
22758b60935SBarry Smith 
22858b60935SBarry Smith     Level: advanced
22958b60935SBarry Smith 
23058b60935SBarry Smith .seealso: PetscObjectSetPrecision()
23158b60935SBarry Smith E*/
23258b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;
23358b60935SBarry Smith extern const char *PetscPrecisions[];
23458b60935SBarry Smith 
23558b60935SBarry Smith 
236503cfb0cSBarry Smith /*
237503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
238503cfb0cSBarry Smith */
239d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
240d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT
241d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
242d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG
243d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
244d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT
245d382aafbSBarry Smith #else
246d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
247d382aafbSBarry Smith #endif
248d382aafbSBarry Smith 
249d382aafbSBarry Smith 
250d382aafbSBarry Smith /*
251d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
252d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
253d382aafbSBarry Smith */
254d382aafbSBarry Smith 
255d382aafbSBarry Smith extern FILE* PETSC_STDOUT;
256d382aafbSBarry Smith 
257d382aafbSBarry Smith /*
258d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
259d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
260d382aafbSBarry Smith */
261d382aafbSBarry Smith extern FILE* PETSC_STDERR;
262d382aafbSBarry Smith 
263d382aafbSBarry Smith /*
264d382aafbSBarry Smith       PETSC_ZOPEFD is used to send data to the PETSc webpage.  It can be used
265d382aafbSBarry Smith     in conjunction with PETSC_STDOUT, or by itself.
266d382aafbSBarry Smith */
267d382aafbSBarry Smith extern FILE* PETSC_ZOPEFD;
268d382aafbSBarry Smith 
269d382aafbSBarry Smith #if !defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
270d382aafbSBarry Smith /*MC
271d382aafbSBarry Smith       PetscPolymorphicSubroutine - allows defining a C++ polymorphic version of
272d382aafbSBarry Smith             a PETSc function that remove certain optional arguments for a simplier user interface
273d382aafbSBarry Smith 
274d382aafbSBarry Smith    Synopsis:
275d382aafbSBarry Smith    PetscPolymorphicSubroutine(Functionname,(arguments of C++ function),(arguments of C function))
276d382aafbSBarry Smith 
277eca87e8dSBarry Smith      Not collective
278eca87e8dSBarry Smith 
279d382aafbSBarry Smith    Level: developer
280d382aafbSBarry Smith 
281d382aafbSBarry Smith     Example:
282d382aafbSBarry Smith       PetscPolymorphicSubroutine(VecNorm,(Vec x,PetscReal *r),(x,NORM_2,r)) generates the new routine
283d382aafbSBarry Smith            PetscErrorCode VecNorm(Vec x,PetscReal *r) = VecNorm(x,NORM_2,r)
284d382aafbSBarry Smith 
285d382aafbSBarry Smith .seealso: PetscPolymorphicFunction()
286d382aafbSBarry Smith 
287d382aafbSBarry Smith M*/
288d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {return A C;}
289d382aafbSBarry Smith 
290d382aafbSBarry Smith /*MC
291d382aafbSBarry Smith       PetscPolymorphicScalar - allows defining a C++ polymorphic version of
292d382aafbSBarry Smith             a PETSc function that replaces a PetscScalar * argument with a PetscScalar argument
293d382aafbSBarry Smith 
294d382aafbSBarry Smith    Synopsis:
295d382aafbSBarry Smith    PetscPolymorphicScalar(Functionname,(arguments of C++ function),(arguments of C function))
296d382aafbSBarry Smith 
297eca87e8dSBarry Smith    Not collective
298eca87e8dSBarry Smith 
299d382aafbSBarry Smith    Level: developer
300d382aafbSBarry Smith 
301d382aafbSBarry Smith     Example:
302d382aafbSBarry Smith       PetscPolymorphicScalar(VecAXPY,(PetscScalar _val,Vec x,Vec y),(&_Val,x,y)) generates the new routine
303d382aafbSBarry Smith            PetscErrorCode VecAXPY(PetscScalar _val,Vec x,Vec y) = {PetscScalar _Val = _val; return VecAXPY(&_Val,x,y);}
304d382aafbSBarry Smith 
305d382aafbSBarry Smith .seealso: PetscPolymorphicFunction(),PetscPolymorphicSubroutine()
306d382aafbSBarry Smith 
307d382aafbSBarry Smith M*/
308d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {PetscScalar _Val = _val; return A C;}
309d382aafbSBarry Smith 
310d382aafbSBarry Smith /*MC
311d382aafbSBarry Smith       PetscPolymorphicFunction - allows defining a C++ polymorphic version of
312d382aafbSBarry Smith             a PETSc function that remove certain optional arguments for a simplier user interface
313d382aafbSBarry Smith             and returns the computed value (istead of an error code)
314d382aafbSBarry Smith 
315d382aafbSBarry Smith    Synopsis:
316d382aafbSBarry Smith    PetscPolymorphicFunction(Functionname,(arguments of C++ function),(arguments of C function),return type,return variable name)
317d382aafbSBarry Smith 
318eca87e8dSBarry Smith      Not collective
319eca87e8dSBarry Smith 
320d382aafbSBarry Smith    Level: developer
321d382aafbSBarry Smith 
322d382aafbSBarry Smith     Example:
323d382aafbSBarry Smith       PetscPolymorphicFunction(VecNorm,(Vec x,NormType t),(x,t,&r),PetscReal,r) generates the new routine
324d382aafbSBarry Smith          PetscReal VecNorm(Vec x,NormType t) = {PetscReal r; VecNorm(x,t,&r); return r;}
325d382aafbSBarry Smith 
326d382aafbSBarry Smith .seealso: PetscPolymorphicSubroutine()
327d382aafbSBarry Smith 
328d382aafbSBarry Smith M*/
329d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) PETSC_STATIC_INLINE D A B {D E; A C;return E;}
330d382aafbSBarry Smith 
331d382aafbSBarry Smith #else
332d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C)
333d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C)
334d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E)
335d382aafbSBarry Smith #endif
336d382aafbSBarry Smith 
337d382aafbSBarry Smith /*MC
338d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
339d382aafbSBarry Smith 
340d382aafbSBarry Smith     Synopsis:
341ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
342d382aafbSBarry Smith 
343eca87e8dSBarry Smith     Not Collective
344eca87e8dSBarry Smith 
345d382aafbSBarry Smith     Input Parameters:
346d382aafbSBarry Smith .   cond - condition or expression
347d382aafbSBarry Smith 
348d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
349d382aafbSBarry Smith     branch is unlikely.
350d382aafbSBarry Smith 
351d382aafbSBarry Smith     Level: advanced
352d382aafbSBarry Smith 
353d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
354d382aafbSBarry Smith M*/
355d382aafbSBarry Smith 
356d382aafbSBarry Smith /*MC
357d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
358d382aafbSBarry Smith 
359d382aafbSBarry Smith     Synopsis:
360ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
361d382aafbSBarry Smith 
362eca87e8dSBarry Smith     Not Collective
363eca87e8dSBarry Smith 
364d382aafbSBarry Smith     Input Parameters:
365d382aafbSBarry Smith .   cond - condition or expression
366d382aafbSBarry Smith 
367d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
368d382aafbSBarry Smith     branch is likely.
369d382aafbSBarry Smith 
370d382aafbSBarry Smith     Level: advanced
371d382aafbSBarry Smith 
372d382aafbSBarry Smith .seealso: PetscUnlikely()
373d382aafbSBarry Smith M*/
374d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
375d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
376d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
377d382aafbSBarry Smith #else
378cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
379cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
380d382aafbSBarry Smith #endif
381d382aafbSBarry Smith 
382d382aafbSBarry Smith /*
383d382aafbSBarry Smith     Defines some elementary mathematics functions and constants.
384d382aafbSBarry Smith */
385d382aafbSBarry Smith #include "petscmath.h"
386d382aafbSBarry Smith 
387d382aafbSBarry Smith /*
388d382aafbSBarry Smith     Declare extern C stuff after including external header files
389d382aafbSBarry Smith */
390d382aafbSBarry Smith 
391d382aafbSBarry Smith PETSC_EXTERN_CXX_BEGIN
392d382aafbSBarry Smith 
393d382aafbSBarry Smith /*
394d382aafbSBarry Smith        Basic PETSc constants
395d382aafbSBarry Smith */
396d382aafbSBarry Smith 
397d382aafbSBarry Smith /*E
398ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
399d382aafbSBarry Smith 
400d382aafbSBarry Smith    Level: beginner
401d382aafbSBarry Smith 
402ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
40334e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
40434e82e7dSBarry Smith 
405d382aafbSBarry Smith E*/
406ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
407ace3abfcSBarry Smith extern const char *PetscBools[];
40870b3c8c7SBarry Smith 
40970b3c8c7SBarry Smith /*E
41070b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
41170b3c8c7SBarry Smith 
41270b3c8c7SBarry Smith    Level: beginner
41370b3c8c7SBarry Smith 
41470b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
41570b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
41670b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
41770b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
41870b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
41970b3c8c7SBarry Smith 
42070b3c8c7SBarry Smith E*/
42170b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
42270b3c8c7SBarry Smith extern const char *PetscCopyModes[];
423d382aafbSBarry Smith 
424d382aafbSBarry Smith /*MC
425ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
426d382aafbSBarry Smith 
427d382aafbSBarry Smith     Level: beginner
428d382aafbSBarry Smith 
429d382aafbSBarry Smith     Note: Zero integer
430d382aafbSBarry Smith 
431ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE
432d382aafbSBarry Smith M*/
433d382aafbSBarry Smith 
434d382aafbSBarry Smith /*MC
435ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
436d382aafbSBarry Smith 
437d382aafbSBarry Smith     Level: beginner
438d382aafbSBarry Smith 
439d382aafbSBarry Smith     Note: Nonzero integer
440d382aafbSBarry Smith 
441ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE
442d382aafbSBarry Smith M*/
443d382aafbSBarry Smith 
444d382aafbSBarry Smith /*MC
445d382aafbSBarry Smith     PETSC_NULL - standard way of passing in a null or array or pointer
446d382aafbSBarry Smith 
447d382aafbSBarry Smith    Level: beginner
448d382aafbSBarry Smith 
449d382aafbSBarry Smith    Notes: accepted by many PETSc functions to not set a parameter and instead use
450d382aafbSBarry Smith           some default
451d382aafbSBarry Smith 
452d382aafbSBarry Smith           This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
453503cfb0cSBarry Smith           PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc
454d382aafbSBarry Smith 
45534e82e7dSBarry Smith   Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under
45634e82e7dSBarry Smith       different versions of Unix. It is tricky to insure the correct include file is always included.
45734e82e7dSBarry Smith 
458d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
459d382aafbSBarry Smith 
460d382aafbSBarry Smith M*/
461d382aafbSBarry Smith #define PETSC_NULL           0
462d382aafbSBarry Smith 
463d382aafbSBarry Smith /*MC
464d382aafbSBarry Smith     PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument
465d382aafbSBarry Smith 
466d382aafbSBarry Smith    Level: beginner
467d382aafbSBarry Smith 
468d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
469d382aafbSBarry Smith           some default
470d382aafbSBarry Smith 
471d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
472d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
473d382aafbSBarry Smith 
474d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
475d382aafbSBarry Smith 
476d382aafbSBarry Smith M*/
477d382aafbSBarry Smith #define PETSC_IGNORE         PETSC_NULL
478d382aafbSBarry Smith 
479d382aafbSBarry Smith /*MC
480557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
481557d4da8SBarry Smith        where you wish PETSc to use the default.
482557d4da8SBarry Smith 
483557d4da8SBarry Smith    Level: beginner
484557d4da8SBarry Smith 
485557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
486557d4da8SBarry Smith 
487557d4da8SBarry Smith M*/
488557d4da8SBarry Smith #define PETSC_DECIDE  -1
489557d4da8SBarry Smith 
490557d4da8SBarry Smith /*MC
491d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
492d382aafbSBarry Smith        where you wish PETSc to compute the required value.
493d382aafbSBarry Smith 
494d382aafbSBarry Smith    Level: beginner
495d382aafbSBarry Smith 
496557d4da8SBarry Smith 
497557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
498557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
499557d4da8SBarry Smith 
500d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes()
501d382aafbSBarry Smith 
502d382aafbSBarry Smith M*/
503d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
504d382aafbSBarry Smith 
505d382aafbSBarry Smith /*MC
506557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
507557d4da8SBarry Smith        where you wish PETSc to use the default.
508557d4da8SBarry Smith 
509557d4da8SBarry Smith    Level: beginner
510557d4da8SBarry Smith 
511557d4da8SBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION.
512557d4da8SBarry Smith 
513557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE
514557d4da8SBarry Smith 
515557d4da8SBarry Smith M*/
516557d4da8SBarry Smith #define PETSC_DEFAULT  -2
517557d4da8SBarry Smith 
518557d4da8SBarry Smith /*MC
519d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
520d382aafbSBarry Smith            all the processs that PETSc knows about.
521d382aafbSBarry Smith 
522d382aafbSBarry Smith    Level: beginner
523d382aafbSBarry Smith 
524d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
525d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
526d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
527d382aafbSBarry Smith           PetscInitialize()
528d382aafbSBarry Smith 
529d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
530d382aafbSBarry Smith 
531d382aafbSBarry Smith M*/
532d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_WORLD;
533d382aafbSBarry Smith 
534d382aafbSBarry Smith /*MC
535503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
536d382aafbSBarry Smith 
537d382aafbSBarry Smith    Level: beginner
538d382aafbSBarry Smith 
539d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
540d382aafbSBarry Smith 
541d382aafbSBarry Smith M*/
542d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
543d382aafbSBarry Smith 
5447087cfbeSBarry Smith extern  PetscBool  PetscInitializeCalled;
5457087cfbeSBarry Smith extern  PetscBool  PetscFinalizeCalled;
546d382aafbSBarry Smith 
5477087cfbeSBarry Smith extern PetscErrorCode  PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
5487087cfbeSBarry Smith extern PetscErrorCode  PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
5497087cfbeSBarry Smith extern PetscErrorCode  PetscCommDestroy(MPI_Comm*);
550d382aafbSBarry Smith 
551d382aafbSBarry Smith /*MC
552d382aafbSBarry Smith    PetscMalloc - Allocates memory
553d382aafbSBarry Smith 
554eca87e8dSBarry Smith    Synopsis:
555eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
556eca87e8dSBarry Smith 
557eca87e8dSBarry Smith    Not Collective
558eca87e8dSBarry Smith 
559d382aafbSBarry Smith    Input Parameter:
560d382aafbSBarry Smith .  m - number of bytes to allocate
561d382aafbSBarry Smith 
562d382aafbSBarry Smith    Output Parameter:
563d382aafbSBarry Smith .  result - memory allocated
564d382aafbSBarry Smith 
565d382aafbSBarry Smith    Level: beginner
566d382aafbSBarry Smith 
567d382aafbSBarry Smith    Notes: Memory is always allocated at least double aligned
568d382aafbSBarry Smith 
569d382aafbSBarry Smith           If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will
570d382aafbSBarry Smith           properly handle not freeing the null pointer.
571d382aafbSBarry Smith 
572d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
573d382aafbSBarry Smith 
574d382aafbSBarry Smith   Concepts: memory allocation
575d382aafbSBarry Smith 
576d382aafbSBarry Smith M*/
5772714b66aSJed Brown #define PetscMalloc(a,b)  ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) )
578d382aafbSBarry Smith 
579d382aafbSBarry Smith /*MC
580503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
581d382aafbSBarry Smith 
582d382aafbSBarry Smith    Synopsis:
583d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
584d382aafbSBarry Smith 
585eca87e8dSBarry Smith    Not Collective
586eca87e8dSBarry Smith 
587eca87e8dSBarry Smith    Input Parameters:
588eca87e8dSBarry Smith .  addr - address to align (any pointer type)
589eca87e8dSBarry Smith 
590d382aafbSBarry Smith    Level: developer
591d382aafbSBarry Smith 
592d382aafbSBarry Smith .seealso: PetscMallocAlign()
593d382aafbSBarry Smith 
594d382aafbSBarry Smith   Concepts: memory allocation
595d382aafbSBarry Smith M*/
596d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
597d382aafbSBarry Smith 
598d382aafbSBarry Smith /*MC
599503cfb0cSBarry Smith    PetscMalloc2 - Allocates 2 chunks of  memory both aligned to PETSC_MEMALIGN
600d382aafbSBarry Smith 
601eca87e8dSBarry Smith    Synopsis:
602eca87e8dSBarry Smith    PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2)
603eca87e8dSBarry Smith 
604eca87e8dSBarry Smith    Not Collective
605eca87e8dSBarry Smith 
606d382aafbSBarry Smith    Input Parameter:
607d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
608d382aafbSBarry Smith .  t1 - type of first memory elements
609d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
610d382aafbSBarry Smith -  t2 - type of second memory elements
611d382aafbSBarry Smith 
612d382aafbSBarry Smith    Output Parameter:
613d382aafbSBarry Smith +  r1 - memory allocated in first chunk
614d382aafbSBarry Smith -  r2 - memory allocated in second chunk
615d382aafbSBarry Smith 
616d382aafbSBarry Smith    Level: developer
617d382aafbSBarry Smith 
618d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
619d382aafbSBarry Smith 
620d382aafbSBarry Smith   Concepts: memory allocation
621d382aafbSBarry Smith 
622d382aafbSBarry Smith M*/
623d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
624d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2))
625d382aafbSBarry Smith #else
6263b98c0a2SBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) \
627d382aafbSBarry Smith                                          || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0))
628d382aafbSBarry Smith #endif
629d382aafbSBarry Smith 
630d382aafbSBarry Smith /*MC
631503cfb0cSBarry Smith    PetscMalloc3 - Allocates 3 chunks of  memory  all aligned to PETSC_MEMALIGN
632d382aafbSBarry Smith 
633eca87e8dSBarry Smith    Synopsis:
634eca87e8dSBarry Smith    PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3)
635eca87e8dSBarry Smith 
636eca87e8dSBarry Smith    Not Collective
637eca87e8dSBarry Smith 
638d382aafbSBarry Smith    Input Parameter:
639d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
640d382aafbSBarry Smith .  t1 - type of first memory elements
641d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
642d382aafbSBarry Smith .  t2 - type of second memory elements
643d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
644d382aafbSBarry Smith -  t3 - type of third memory elements
645d382aafbSBarry Smith 
646d382aafbSBarry Smith    Output Parameter:
647d382aafbSBarry Smith +  r1 - memory allocated in first chunk
648d382aafbSBarry Smith .  r2 - memory allocated in second chunk
649d382aafbSBarry Smith -  r3 - memory allocated in third chunk
650d382aafbSBarry Smith 
651d382aafbSBarry Smith    Level: developer
652d382aafbSBarry Smith 
653d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3()
654d382aafbSBarry Smith 
655d382aafbSBarry Smith   Concepts: memory allocation
656d382aafbSBarry Smith 
657d382aafbSBarry Smith M*/
658d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
659d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3))
660d382aafbSBarry Smith #else
6613b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \
662d382aafbSBarry Smith                                                   || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0))
663d382aafbSBarry Smith #endif
664d382aafbSBarry Smith 
665d382aafbSBarry Smith /*MC
666503cfb0cSBarry Smith    PetscMalloc4 - Allocates 4 chunks of  memory  all aligned to PETSC_MEMALIGN
667d382aafbSBarry Smith 
668eca87e8dSBarry Smith    Synopsis:
669eca87e8dSBarry Smith    PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4)
670eca87e8dSBarry Smith 
671eca87e8dSBarry Smith    Not Collective
672eca87e8dSBarry Smith 
673d382aafbSBarry Smith    Input Parameter:
674d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
675d382aafbSBarry Smith .  t1 - type of first memory elements
676d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
677d382aafbSBarry Smith .  t2 - type of second memory elements
678d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
679d382aafbSBarry Smith .  t3 - type of third memory elements
680d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
681d382aafbSBarry Smith -  t4 - type of fourth memory elements
682d382aafbSBarry Smith 
683d382aafbSBarry Smith    Output Parameter:
684d382aafbSBarry Smith +  r1 - memory allocated in first chunk
685d382aafbSBarry Smith .  r2 - memory allocated in second chunk
686d382aafbSBarry Smith .  r3 - memory allocated in third chunk
687d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
688d382aafbSBarry Smith 
689d382aafbSBarry Smith    Level: developer
690d382aafbSBarry Smith 
691d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4()
692d382aafbSBarry Smith 
693d382aafbSBarry Smith   Concepts: memory allocation
694d382aafbSBarry Smith 
695d382aafbSBarry Smith M*/
696d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
697d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4))
698d382aafbSBarry Smith #else
699d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4)               \
7003b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \
701d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0))
702d382aafbSBarry Smith #endif
703d382aafbSBarry Smith 
704d382aafbSBarry Smith /*MC
705503cfb0cSBarry Smith    PetscMalloc5 - Allocates 5 chunks of  memory all aligned to PETSC_MEMALIGN
706d382aafbSBarry Smith 
707eca87e8dSBarry Smith    Synopsis:
708eca87e8dSBarry Smith    PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5)
709eca87e8dSBarry Smith 
710eca87e8dSBarry Smith    Not Collective
711eca87e8dSBarry Smith 
712d382aafbSBarry Smith    Input Parameter:
713d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
714d382aafbSBarry Smith .  t1 - type of first memory elements
715d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
716d382aafbSBarry Smith .  t2 - type of second memory elements
717d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
718d382aafbSBarry Smith .  t3 - type of third memory elements
719d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
720d382aafbSBarry Smith .  t4 - type of fourth memory elements
721d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
722d382aafbSBarry Smith -  t5 - type of fifth memory elements
723d382aafbSBarry Smith 
724d382aafbSBarry Smith    Output Parameter:
725d382aafbSBarry Smith +  r1 - memory allocated in first chunk
726d382aafbSBarry Smith .  r2 - memory allocated in second chunk
727d382aafbSBarry Smith .  r3 - memory allocated in third chunk
728d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
729d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
730d382aafbSBarry Smith 
731d382aafbSBarry Smith    Level: developer
732d382aafbSBarry Smith 
733d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5()
734d382aafbSBarry Smith 
735d382aafbSBarry Smith   Concepts: memory allocation
736d382aafbSBarry Smith 
737d382aafbSBarry Smith M*/
738d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
739d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5))
740d382aafbSBarry Smith #else
741d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5)      \
7423b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \
743d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0))
744d382aafbSBarry Smith #endif
745d382aafbSBarry Smith 
746d382aafbSBarry Smith 
747d382aafbSBarry Smith /*MC
748503cfb0cSBarry Smith    PetscMalloc6 - Allocates 6 chunks of  memory all aligned to PETSC_MEMALIGN
749d382aafbSBarry Smith 
750eca87e8dSBarry Smith    Synopsis:
751eca87e8dSBarry Smith    PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6)
752eca87e8dSBarry Smith 
753eca87e8dSBarry Smith    Not Collective
754eca87e8dSBarry Smith 
755d382aafbSBarry Smith    Input Parameter:
756d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
757d382aafbSBarry Smith .  t1 - type of first memory elements
758d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
759d382aafbSBarry Smith .  t2 - type of second memory elements
760d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
761d382aafbSBarry Smith .  t3 - type of third memory elements
762d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
763d382aafbSBarry Smith .  t4 - type of fourth memory elements
764d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
765d382aafbSBarry Smith .  t5 - type of fifth memory elements
766d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
767d382aafbSBarry Smith -  t6 - type of sixth memory elements
768d382aafbSBarry Smith 
769d382aafbSBarry Smith    Output Parameter:
770d382aafbSBarry Smith +  r1 - memory allocated in first chunk
771d382aafbSBarry Smith .  r2 - memory allocated in second chunk
772d382aafbSBarry Smith .  r3 - memory allocated in third chunk
773d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
774d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
775d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
776d382aafbSBarry Smith 
777d382aafbSBarry Smith    Level: developer
778d382aafbSBarry Smith 
779d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
780d382aafbSBarry Smith 
781d382aafbSBarry Smith   Concepts: memory allocation
782d382aafbSBarry Smith 
783d382aafbSBarry Smith M*/
784d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
785d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6))
786d382aafbSBarry Smith #else
787d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \
7883b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \
789d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0))
790d382aafbSBarry Smith #endif
791d382aafbSBarry Smith 
792d382aafbSBarry Smith /*MC
793503cfb0cSBarry Smith    PetscMalloc7 - Allocates 7 chunks of  memory all aligned to PETSC_MEMALIGN
794d382aafbSBarry Smith 
795eca87e8dSBarry Smith    Synopsis:
796eca87e8dSBarry Smith    PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7)
797eca87e8dSBarry Smith 
798eca87e8dSBarry Smith    Not Collective
799eca87e8dSBarry Smith 
800d382aafbSBarry Smith    Input Parameter:
801d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
802d382aafbSBarry Smith .  t1 - type of first memory elements
803d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
804d382aafbSBarry Smith .  t2 - type of second memory elements
805d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
806d382aafbSBarry Smith .  t3 - type of third memory elements
807d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
808d382aafbSBarry Smith .  t4 - type of fourth memory elements
809d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
810d382aafbSBarry Smith .  t5 - type of fifth memory elements
811d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
812d382aafbSBarry Smith .  t6 - type of sixth memory elements
813d382aafbSBarry Smith .  m7 - number of elements to allocate in 7th chunk  (may be zero)
814d382aafbSBarry Smith -  t7 - type of sixth memory elements
815d382aafbSBarry Smith 
816d382aafbSBarry Smith    Output Parameter:
817d382aafbSBarry Smith +  r1 - memory allocated in first chunk
818d382aafbSBarry Smith .  r2 - memory allocated in second chunk
819d382aafbSBarry Smith .  r3 - memory allocated in third chunk
820d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
821d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
822d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
823eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
824d382aafbSBarry Smith 
825d382aafbSBarry Smith    Level: developer
826d382aafbSBarry Smith 
827d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7()
828d382aafbSBarry Smith 
829d382aafbSBarry Smith   Concepts: memory allocation
830d382aafbSBarry Smith 
831d382aafbSBarry Smith M*/
832d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
833d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7))
834d382aafbSBarry Smith #else
835d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \
8363b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \
837d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0))
838d382aafbSBarry Smith #endif
839d382aafbSBarry Smith 
840d382aafbSBarry Smith /*MC
841503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
842d382aafbSBarry Smith 
843eca87e8dSBarry Smith    Synopsis:
844eca87e8dSBarry Smith    PetscErrorCode PetscNew(struct type,((type *))result)
845eca87e8dSBarry Smith 
846eca87e8dSBarry Smith    Not Collective
847eca87e8dSBarry Smith 
848d382aafbSBarry Smith    Input Parameter:
849d382aafbSBarry Smith .  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
850d382aafbSBarry Smith 
851d382aafbSBarry Smith    Output Parameter:
852d382aafbSBarry Smith .  result - memory allocated
853d382aafbSBarry Smith 
854d382aafbSBarry Smith    Level: beginner
855d382aafbSBarry Smith 
856ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog()
857d382aafbSBarry Smith 
858d382aafbSBarry Smith   Concepts: memory allocation
859d382aafbSBarry Smith 
860d382aafbSBarry Smith M*/
861d382aafbSBarry Smith #define PetscNew(A,b)      (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A)))
862ad0619ddSBarry Smith 
863ad0619ddSBarry Smith /*MC
864ad0619ddSBarry Smith    PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
865ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
866ad0619ddSBarry Smith 
867ad0619ddSBarry Smith    Synopsis:
868ad0619ddSBarry Smith    PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result)
869ad0619ddSBarry Smith 
870ad0619ddSBarry Smith    Not Collective
871ad0619ddSBarry Smith 
872ad0619ddSBarry Smith    Input Parameter:
873ad0619ddSBarry Smith +  obj - object memory is logged to
874ad0619ddSBarry Smith -  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
875ad0619ddSBarry Smith 
876ad0619ddSBarry Smith    Output Parameter:
877ad0619ddSBarry Smith .  result - memory allocated
878ad0619ddSBarry Smith 
879ad0619ddSBarry Smith    Level: developer
880ad0619ddSBarry Smith 
881ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory()
882ad0619ddSBarry Smith 
883ad0619ddSBarry Smith   Concepts: memory allocation
884ad0619ddSBarry Smith 
885ad0619ddSBarry Smith M*/
886d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0))
887d382aafbSBarry Smith 
888d382aafbSBarry Smith /*MC
889d382aafbSBarry Smith    PetscFree - Frees memory
890d382aafbSBarry Smith 
891eca87e8dSBarry Smith    Synopsis:
892eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
893eca87e8dSBarry Smith 
894eca87e8dSBarry Smith    Not Collective
895eca87e8dSBarry Smith 
896d382aafbSBarry Smith    Input Parameter:
897d382aafbSBarry Smith .   memory - memory to free (the pointer is ALWAYS set to 0 upon sucess)
898d382aafbSBarry Smith 
899d382aafbSBarry Smith    Level: beginner
900d382aafbSBarry Smith 
901d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscNew() or PetscMalloc()
902d382aafbSBarry Smith 
903d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid()
904d382aafbSBarry Smith 
905d382aafbSBarry Smith   Concepts: memory allocation
906d382aafbSBarry Smith 
907d382aafbSBarry Smith M*/
90812537b14SJed Brown #define PetscFree(a)   ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0)))
909d382aafbSBarry Smith 
910d382aafbSBarry Smith /*MC
911d382aafbSBarry Smith    PetscFreeVoid - Frees memory
912d382aafbSBarry Smith 
913d382aafbSBarry Smith    Synopsis:
914d382aafbSBarry Smith    void PetscFreeVoid(void *memory)
915d382aafbSBarry Smith 
916eca87e8dSBarry Smith    Not Collective
917eca87e8dSBarry Smith 
918eca87e8dSBarry Smith    Input Parameter:
919eca87e8dSBarry Smith .   memory - memory to free
920eca87e8dSBarry Smith 
921d382aafbSBarry Smith    Level: beginner
922d382aafbSBarry Smith 
923d382aafbSBarry Smith    Notes: This is different from PetscFree() in that no error code is returned
924d382aafbSBarry Smith 
925d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
926d382aafbSBarry Smith 
927d382aafbSBarry Smith   Concepts: memory allocation
928d382aafbSBarry Smith 
929d382aafbSBarry Smith M*/
9302714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0)
931d382aafbSBarry Smith 
932d382aafbSBarry Smith 
933d382aafbSBarry Smith /*MC
934d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
935d382aafbSBarry Smith 
936eca87e8dSBarry Smith    Synopsis:
937eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
938eca87e8dSBarry Smith 
939eca87e8dSBarry Smith    Not Collective
940eca87e8dSBarry Smith 
941d382aafbSBarry Smith    Input Parameter:
942d382aafbSBarry Smith +   memory1 - memory to free
943d382aafbSBarry Smith -   memory2 - 2nd memory to free
944d382aafbSBarry Smith 
945d382aafbSBarry Smith    Level: developer
946d382aafbSBarry Smith 
947d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
948d382aafbSBarry Smith 
949d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
950d382aafbSBarry Smith 
951d382aafbSBarry Smith   Concepts: memory allocation
952d382aafbSBarry Smith 
953d382aafbSBarry Smith M*/
954d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
955d382aafbSBarry Smith #define PetscFree2(m1,m2)   (PetscFree(m2) || PetscFree(m1))
956d382aafbSBarry Smith #else
95781dabb53SJed Brown #define PetscFree2(m1,m2)   ((m2)=0, PetscFree(m1))
958d382aafbSBarry Smith #endif
959d382aafbSBarry Smith 
960d382aafbSBarry Smith /*MC
961d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
962d382aafbSBarry Smith 
963eca87e8dSBarry Smith    Synopsis:
964eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
965eca87e8dSBarry Smith 
966eca87e8dSBarry Smith    Not Collective
967eca87e8dSBarry Smith 
968d382aafbSBarry Smith    Input Parameter:
969d382aafbSBarry Smith +   memory1 - memory to free
970d382aafbSBarry Smith .   memory2 - 2nd memory to free
971d382aafbSBarry Smith -   memory3 - 3rd memory to free
972d382aafbSBarry Smith 
973d382aafbSBarry Smith    Level: developer
974d382aafbSBarry Smith 
975d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
976d382aafbSBarry Smith 
977d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
978d382aafbSBarry Smith 
979d382aafbSBarry Smith   Concepts: memory allocation
980d382aafbSBarry Smith 
981d382aafbSBarry Smith M*/
982d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
983d382aafbSBarry Smith #define PetscFree3(m1,m2,m3)   (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
984d382aafbSBarry Smith #else
98581dabb53SJed Brown #define PetscFree3(m1,m2,m3)   ((m3)=0,(m2)=0,PetscFree(m1))
986d382aafbSBarry Smith #endif
987d382aafbSBarry Smith 
988d382aafbSBarry Smith /*MC
989d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
990d382aafbSBarry Smith 
991eca87e8dSBarry Smith    Synopsis:
992eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
993eca87e8dSBarry Smith 
994eca87e8dSBarry Smith    Not Collective
995eca87e8dSBarry Smith 
996d382aafbSBarry Smith    Input Parameter:
997d382aafbSBarry Smith +   m1 - memory to free
998d382aafbSBarry Smith .   m2 - 2nd memory to free
999d382aafbSBarry Smith .   m3 - 3rd memory to free
1000d382aafbSBarry Smith -   m4 - 4th memory to free
1001d382aafbSBarry Smith 
1002d382aafbSBarry Smith    Level: developer
1003d382aafbSBarry Smith 
1004d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
1005d382aafbSBarry Smith 
1006d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
1007d382aafbSBarry Smith 
1008d382aafbSBarry Smith   Concepts: memory allocation
1009d382aafbSBarry Smith 
1010d382aafbSBarry Smith M*/
1011d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1012d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4)   (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1013d382aafbSBarry Smith #else
101481dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4)   ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1015d382aafbSBarry Smith #endif
1016d382aafbSBarry Smith 
1017d382aafbSBarry Smith /*MC
1018d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
1019d382aafbSBarry Smith 
1020eca87e8dSBarry Smith    Synopsis:
1021eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
1022eca87e8dSBarry Smith 
1023eca87e8dSBarry Smith    Not Collective
1024eca87e8dSBarry Smith 
1025d382aafbSBarry Smith    Input Parameter:
1026d382aafbSBarry Smith +   m1 - memory to free
1027d382aafbSBarry Smith .   m2 - 2nd memory to free
1028d382aafbSBarry Smith .   m3 - 3rd memory to free
1029d382aafbSBarry Smith .   m4 - 4th memory to free
1030d382aafbSBarry Smith -   m5 - 5th memory to free
1031d382aafbSBarry Smith 
1032d382aafbSBarry Smith    Level: developer
1033d382aafbSBarry Smith 
1034d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
1035d382aafbSBarry Smith 
1036d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
1037d382aafbSBarry Smith 
1038d382aafbSBarry Smith   Concepts: memory allocation
1039d382aafbSBarry Smith 
1040d382aafbSBarry Smith M*/
1041d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1042d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5)   (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1043d382aafbSBarry Smith #else
104481dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1045d382aafbSBarry Smith #endif
1046d382aafbSBarry Smith 
1047d382aafbSBarry Smith 
1048d382aafbSBarry Smith /*MC
1049d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
1050d382aafbSBarry Smith 
1051eca87e8dSBarry Smith    Synopsis:
1052eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
1053eca87e8dSBarry Smith 
1054eca87e8dSBarry Smith    Not Collective
1055eca87e8dSBarry Smith 
1056d382aafbSBarry Smith    Input Parameter:
1057d382aafbSBarry Smith +   m1 - memory to free
1058d382aafbSBarry Smith .   m2 - 2nd memory to free
1059d382aafbSBarry Smith .   m3 - 3rd memory to free
1060d382aafbSBarry Smith .   m4 - 4th memory to free
1061d382aafbSBarry Smith .   m5 - 5th memory to free
1062d382aafbSBarry Smith -   m6 - 6th memory to free
1063d382aafbSBarry Smith 
1064d382aafbSBarry Smith 
1065d382aafbSBarry Smith    Level: developer
1066d382aafbSBarry Smith 
1067d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
1068d382aafbSBarry Smith 
1069d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
1070d382aafbSBarry Smith 
1071d382aafbSBarry Smith   Concepts: memory allocation
1072d382aafbSBarry Smith 
1073d382aafbSBarry Smith M*/
1074d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1075d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6)   (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1076d382aafbSBarry Smith #else
107781dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1078d382aafbSBarry Smith #endif
1079d382aafbSBarry Smith 
1080d382aafbSBarry Smith /*MC
1081d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
1082d382aafbSBarry Smith 
1083eca87e8dSBarry Smith    Synopsis:
1084eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1085eca87e8dSBarry Smith 
1086eca87e8dSBarry Smith    Not Collective
1087eca87e8dSBarry Smith 
1088d382aafbSBarry Smith    Input Parameter:
1089d382aafbSBarry Smith +   m1 - memory to free
1090d382aafbSBarry Smith .   m2 - 2nd memory to free
1091d382aafbSBarry Smith .   m3 - 3rd memory to free
1092d382aafbSBarry Smith .   m4 - 4th memory to free
1093d382aafbSBarry Smith .   m5 - 5th memory to free
1094d382aafbSBarry Smith .   m6 - 6th memory to free
1095d382aafbSBarry Smith -   m7 - 7th memory to free
1096d382aafbSBarry Smith 
1097d382aafbSBarry Smith 
1098d382aafbSBarry Smith    Level: developer
1099d382aafbSBarry Smith 
1100d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1101d382aafbSBarry Smith 
1102d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1103d382aafbSBarry Smith           PetscMalloc7()
1104d382aafbSBarry Smith 
1105d382aafbSBarry Smith   Concepts: memory allocation
1106d382aafbSBarry Smith 
1107d382aafbSBarry Smith M*/
1108d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1109d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1110d382aafbSBarry Smith #else
111181dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1112d382aafbSBarry Smith #endif
1113d382aafbSBarry Smith 
11147087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);
11157087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);
11167087cfbeSBarry Smith extern PetscErrorCode   PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[]));
11177087cfbeSBarry Smith extern PetscErrorCode   PetscMallocClear(void);
1118d382aafbSBarry Smith 
1119d382aafbSBarry Smith /*
112066d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc  memory allocation
1121d382aafbSBarry Smith */
11227087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDump(FILE *);
11237087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDumpLog(FILE *);
11247087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetCurrentUsage(PetscLogDouble *);
11257087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetMaximumUsage(PetscLogDouble *);
11267087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDebug(PetscBool);
11277087cfbeSBarry Smith extern PetscErrorCode    PetscMallocValidate(int,const char[],const char[],const char[]);
11287087cfbeSBarry Smith extern PetscErrorCode    PetscMallocSetDumpLog(void);
1129d382aafbSBarry Smith 
1130d382aafbSBarry Smith 
1131d382aafbSBarry Smith /*E
1132d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1133d382aafbSBarry Smith 
1134d382aafbSBarry Smith    Level: beginner
1135d382aafbSBarry Smith 
1136d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1137d382aafbSBarry Smith 
1138d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1139d382aafbSBarry Smith           PetscDataTypeGetSize()
1140d382aafbSBarry Smith 
1141d382aafbSBarry Smith E*/
1142d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
1143557d4da8SBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC_LONG_DOUBLE = 10} PetscDataType;
1144d382aafbSBarry Smith extern const char *PetscDataTypes[];
1145d382aafbSBarry Smith 
1146d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1147d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1148d382aafbSBarry Smith #else
1149ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1150d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
1151ce63c4c1SBarry Smith #elif defined(PETSC_USE_REAL_LONG_DOUBLE)
1152d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_LONG_DOUBLE
1153d382aafbSBarry Smith #else
1154d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1155d382aafbSBarry Smith #endif
1156d382aafbSBarry Smith #endif
1157ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1158d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
1159ce63c4c1SBarry Smith #elif defined(PETSC_USE_REAL_LONG_DOUBLE)
1160d382aafbSBarry Smith #define  PETSC_REAL  PETSC_LONG_DOUBLE
1161d382aafbSBarry Smith #else
1162d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1163d382aafbSBarry Smith #endif
1164d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1165d382aafbSBarry Smith 
11667087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
11677087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
11687087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeGetSize(PetscDataType,size_t*);
1169d382aafbSBarry Smith 
1170d382aafbSBarry Smith /*
1171d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1172d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1173d382aafbSBarry Smith    functionality and/or error checking.
1174d382aafbSBarry Smith */
11757087cfbeSBarry Smith extern PetscErrorCode    PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
11767087cfbeSBarry Smith extern PetscErrorCode    PetscMemmove(void*,void *,size_t);
11777087cfbeSBarry Smith extern PetscErrorCode    PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
11787087cfbeSBarry Smith extern PetscErrorCode    PetscStrlen(const char[],size_t*);
11797087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArray(const char[],int*,char ***);
11807087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArrayDestroy(int,char **);
11817087cfbeSBarry Smith extern PetscErrorCode    PetscStrcmp(const char[],const char[],PetscBool  *);
11827087cfbeSBarry Smith extern PetscErrorCode    PetscStrgrt(const char[],const char[],PetscBool  *);
11837087cfbeSBarry Smith extern PetscErrorCode    PetscStrcasecmp(const char[],const char[],PetscBool *);
11847087cfbeSBarry Smith extern PetscErrorCode    PetscStrncmp(const char[],const char[],size_t,PetscBool *);
11857087cfbeSBarry Smith extern PetscErrorCode    PetscStrcpy(char[],const char[]);
11867087cfbeSBarry Smith extern PetscErrorCode    PetscStrcat(char[],const char[]);
11877087cfbeSBarry Smith extern PetscErrorCode    PetscStrncat(char[],const char[],size_t);
11887087cfbeSBarry Smith extern PetscErrorCode    PetscStrncpy(char[],const char[],size_t);
11897087cfbeSBarry Smith extern PetscErrorCode    PetscStrchr(const char[],char,char *[]);
11907087cfbeSBarry Smith extern PetscErrorCode    PetscStrtolower(char[]);
11917087cfbeSBarry Smith extern PetscErrorCode    PetscStrrchr(const char[],char,char *[]);
11927087cfbeSBarry Smith extern PetscErrorCode    PetscStrstr(const char[],const char[],char *[]);
11937087cfbeSBarry Smith extern PetscErrorCode    PetscStrrstr(const char[],const char[],char *[]);
119474722a09SBarry Smith extern PetscErrorCode    PetscStrendswith(const char[],const char[],PetscBool*);
11957ba3a57cSBarry Smith extern PetscErrorCode    PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
11967087cfbeSBarry Smith extern PetscErrorCode    PetscStrallocpy(const char[],char *[]);
11977087cfbeSBarry Smith extern PetscErrorCode    PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1198d382aafbSBarry Smith 
1199d382aafbSBarry Smith /*S
1200d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1201d382aafbSBarry Smith 
1202d382aafbSBarry Smith   Level: intermediate
1203d382aafbSBarry Smith 
1204d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1205d382aafbSBarry Smith S*/
1206d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1207d382aafbSBarry Smith 
12087087cfbeSBarry Smith extern PetscErrorCode    PetscTokenCreate(const char[],const char,PetscToken*);
12097087cfbeSBarry Smith extern PetscErrorCode    PetscTokenFind(PetscToken,char *[]);
12107087cfbeSBarry Smith extern PetscErrorCode    PetscTokenDestroy(PetscToken);
1211d382aafbSBarry Smith 
1212d382aafbSBarry Smith /*
1213d382aafbSBarry Smith    These are  MPI operations for MPI_Allreduce() etc
1214d382aafbSBarry Smith */
12157087cfbeSBarry Smith extern  MPI_Op PetscMaxSum_Op;
1216ce63c4c1SBarry Smith #if (defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128)
12177087cfbeSBarry Smith extern  MPI_Op MPIU_SUM;
1218d382aafbSBarry Smith #else
1219d382aafbSBarry Smith #define MPIU_SUM MPI_SUM
1220d382aafbSBarry Smith #endif
1221ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL___FLOAT128)
1222d9822059SBarry Smith extern  MPI_Op MPIU_MAX;
1223d9822059SBarry Smith extern  MPI_Op MPIU_MIN;
1224d9822059SBarry Smith #else
1225d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1226d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1227d9822059SBarry Smith #endif
12287087cfbeSBarry Smith extern PetscErrorCode  PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1229d382aafbSBarry Smith 
1230eb3f98d2SBarry Smith extern PetscErrorCode MPILong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1231eb3f98d2SBarry Smith extern PetscErrorCode MPILong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1232eb3f98d2SBarry Smith 
1233d382aafbSBarry Smith /*S
1234d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1235d382aafbSBarry Smith 
1236d382aafbSBarry Smith    Level: beginner
1237d382aafbSBarry Smith 
1238d382aafbSBarry Smith    Note: This is the base class from which all objects appear.
1239d382aafbSBarry Smith 
12401890ba74SBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc()
1241d382aafbSBarry Smith S*/
1242d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1243d382aafbSBarry Smith 
1244d382aafbSBarry Smith /*S
1245d382aafbSBarry Smith      PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed
1246d382aafbSBarry Smith       by string name
1247d382aafbSBarry Smith 
1248d382aafbSBarry Smith    Level: advanced
1249d382aafbSBarry Smith 
1250d382aafbSBarry Smith .seealso:  PetscFListAdd(), PetscFListDestroy()
1251d382aafbSBarry Smith S*/
1252d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList;
1253d382aafbSBarry Smith 
1254d382aafbSBarry Smith /*E
1255d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1256d382aafbSBarry Smith 
1257d382aafbSBarry Smith   Level: beginner
1258d382aafbSBarry Smith 
1259d382aafbSBarry Smith   FILE_MODE_READ - open a file at its beginning for reading
1260d382aafbSBarry Smith 
1261d382aafbSBarry Smith   FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1262d382aafbSBarry Smith 
1263d382aafbSBarry Smith   FILE_MODE_APPEND - open a file at end for writing
1264d382aafbSBarry Smith 
1265d382aafbSBarry Smith   FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1266d382aafbSBarry Smith 
1267d382aafbSBarry Smith   FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1268d382aafbSBarry Smith 
1269d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1270d382aafbSBarry Smith E*/
1271d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1272d382aafbSBarry Smith 
1273d382aafbSBarry Smith #include "petscviewer.h"
1274d382aafbSBarry Smith #include "petscoptions.h"
1275d382aafbSBarry Smith 
12760700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
12777087cfbeSBarry Smith extern PetscClassId   PETSC_LARGEST_CLASSID;
12787087cfbeSBarry Smith extern PetscClassId   PETSC_OBJECT_CLASSID;
12797087cfbeSBarry Smith extern PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1280d382aafbSBarry Smith 
1281d382aafbSBarry Smith /*
1282d382aafbSBarry Smith    Routines that get memory usage information from the OS
1283d382aafbSBarry Smith */
12847087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetCurrentUsage(PetscLogDouble *);
12857087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetMaximumUsage(PetscLogDouble *);
12867087cfbeSBarry Smith extern PetscErrorCode  PetscMemorySetGetMaximumUsage(void);
12877087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryShowUsage(PetscViewer,const char[]);
1288d382aafbSBarry Smith 
12897087cfbeSBarry Smith extern PetscErrorCode  PetscInfoAllow(PetscBool ,const char []);
12907087cfbeSBarry Smith extern PetscErrorCode  PetscGetTime(PetscLogDouble*);
12917087cfbeSBarry Smith extern PetscErrorCode  PetscGetCPUTime(PetscLogDouble*);
12927087cfbeSBarry Smith extern PetscErrorCode  PetscSleep(PetscReal);
1293d382aafbSBarry Smith 
1294d382aafbSBarry Smith /*
1295d382aafbSBarry Smith    Initialization of PETSc
1296d382aafbSBarry Smith */
12977087cfbeSBarry Smith extern PetscErrorCode  PetscInitialize(int*,char***,const char[],const char[]);
1298d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscInitialize,(int *argc,char ***args),(argc,args,PETSC_NULL,PETSC_NULL))
12997087cfbeSBarry Smith extern PetscErrorCode  PetscInitializeNoArguments(void);
13007087cfbeSBarry Smith extern PetscErrorCode  PetscInitialized(PetscBool  *);
13017087cfbeSBarry Smith extern PetscErrorCode  PetscFinalized(PetscBool  *);
13027087cfbeSBarry Smith extern PetscErrorCode  PetscFinalize(void);
130309573ac7SBarry Smith extern PetscErrorCode PetscInitializeFortran(void);
13047087cfbeSBarry Smith extern PetscErrorCode  PetscGetArgs(int*,char ***);
13057087cfbeSBarry Smith extern PetscErrorCode  PetscGetArguments(char ***);
13067087cfbeSBarry Smith extern PetscErrorCode  PetscFreeArguments(char **);
1307d382aafbSBarry Smith 
13087087cfbeSBarry Smith extern PetscErrorCode  PetscEnd(void);
13097087cfbeSBarry Smith extern PetscErrorCode  PetscSysInitializePackage(const char[]);
1310d382aafbSBarry Smith 
1311d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_LOCAL_WORLD;
131285afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*);
131385afcc9aSBarry Smith extern PetscErrorCode  PetscHMPISpawn(PetscMPIInt);
131485afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIFinalize(void);
131585afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*);
131685afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*);
131785afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIFree(MPI_Comm,void*);
131885afcc9aSBarry Smith extern PetscErrorCode  PetscHMPIMalloc(MPI_Comm,size_t,void**);
1319d382aafbSBarry Smith 
13207087cfbeSBarry Smith extern PetscErrorCode  PetscPythonInitialize(const char[],const char[]);
13217087cfbeSBarry Smith extern PetscErrorCode  PetscPythonFinalize(void);
13227087cfbeSBarry Smith extern PetscErrorCode  PetscPythonPrintError(void);
13235180491cSLisandro Dalcin extern PetscErrorCode  PetscPythonMonitorSet(PetscObject,const char[]);
1324d382aafbSBarry Smith 
1325d382aafbSBarry Smith /*
1326d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
1327d382aafbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be
1328d382aafbSBarry Smith    C++.
1329d382aafbSBarry Smith */
1330d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void);
1331d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void);
1332d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1333d382aafbSBarry Smith 
1334d382aafbSBarry Smith /*
1335d382aafbSBarry Smith    PetscTryMethod - Queries an object for a method, if it exists then calls it.
1336d382aafbSBarry Smith               These are intended to be used only inside PETSc functions.
1337503cfb0cSBarry Smith 
1338503cfb0cSBarry Smith    Level: developer
1339503cfb0cSBarry Smith 
1340503cfb0cSBarry Smith .seealso: PetscUseMethod()
1341d382aafbSBarry Smith */
1342d382aafbSBarry Smith #define  PetscTryMethod(obj,A,B,C) \
1343d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1344d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1345d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1346d382aafbSBarry Smith   }
1347503cfb0cSBarry Smith 
1348503cfb0cSBarry Smith /*
1349503cfb0cSBarry Smith    PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error.
1350503cfb0cSBarry Smith               These are intended to be used only inside PETSc functions.
1351503cfb0cSBarry Smith 
1352503cfb0cSBarry Smith    Level: developer
1353503cfb0cSBarry Smith 
1354503cfb0cSBarry Smith .seealso: PetscTryMethod()
1355503cfb0cSBarry Smith */
1356d382aafbSBarry Smith #define  PetscUseMethod(obj,A,B,C) \
1357d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1358d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1359d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1360703c66c1SJed Brown     else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \
1361d382aafbSBarry Smith   }
1362503cfb0cSBarry Smith 
1363d382aafbSBarry Smith /*
1364d382aafbSBarry Smith     Functions that can act on any PETSc object.
1365d382aafbSBarry Smith */
1366fcfd50ebSBarry Smith extern PetscErrorCode  PetscObjectDestroy(PetscObject*);
13677087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetComm(PetscObject,MPI_Comm *);
13687087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetClassId(PetscObject,PetscClassId *);
1369609db0e0SLisandro Dalcin extern PetscErrorCode  PetscObjectGetClassName(PetscObject,const char *[]);
13707087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetType(PetscObject,const char []);
13717087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetPrecision(PetscObject,PetscPrecision);
13727087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetType(PetscObject,const char *[]);
13737087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetName(PetscObject,const char[]);
13747087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetName(PetscObject,const char*[]);
13757087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]);
13767087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetTabLevel(PetscObject,PetscInt);
13777087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetTabLevel(PetscObject,PetscInt*);
13787087cfbeSBarry Smith extern PetscErrorCode  PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
13797087cfbeSBarry Smith extern PetscErrorCode  PetscObjectReference(PetscObject);
13807087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetReference(PetscObject,PetscInt*);
13817087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDereference(PetscObject);
13827087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
13837087cfbeSBarry Smith extern PetscErrorCode  PetscObjectView(PetscObject,PetscViewer);
13847087cfbeSBarry Smith extern PetscErrorCode  PetscObjectCompose(PetscObject,const char[],PetscObject);
13856ba4bc90SBarry Smith extern PetscErrorCode  PetscObjectRemoveReference(PetscObject,const char[]);
13867087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQuery(PetscObject,const char[],PetscObject *);
13877087cfbeSBarry Smith extern PetscErrorCode  PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void));
13887087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetFromOptions(PetscObject);
13897087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetUp(PetscObject);
13907087cfbeSBarry Smith extern PetscErrorCode  PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
13917087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*);
13927087cfbeSBarry Smith extern PetscErrorCode  PetscObjectProcessOptionsHandlers(PetscObject);
13937087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDestroyOptionsHandlers(PetscObject);
1394d382aafbSBarry Smith 
1395d382aafbSBarry Smith /*MC
1396d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object.
1397d382aafbSBarry Smith 
1398eca87e8dSBarry Smith     Synopsis:
1399eca87e8dSBarry Smith     PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr)
1400eca87e8dSBarry Smith 
1401ad4df100SBarry Smith    Logically Collective on PetscObject
1402d382aafbSBarry Smith 
1403d382aafbSBarry Smith    Input Parameters:
1404d382aafbSBarry Smith +  obj - the PETSc object; this must be cast with a (PetscObject), for example,
1405d382aafbSBarry Smith          PetscObjectCompose((PetscObject)mat,...);
1406d382aafbSBarry Smith .  name - name associated with the child function
1407d382aafbSBarry Smith .  fname - name of the function
1408d382aafbSBarry Smith -  ptr - function pointer (or PETSC_NULL if using dynamic libraries)
1409d382aafbSBarry Smith 
1410d382aafbSBarry Smith    Level: advanced
1411d382aafbSBarry Smith 
1412d382aafbSBarry Smith 
1413d382aafbSBarry Smith    Notes:
1414d382aafbSBarry Smith    To remove a registered routine, pass in a PETSC_NULL rname and fnc().
1415d382aafbSBarry Smith 
1416d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as
1417d382aafbSBarry Smith    Mat, Vec, KSP, SNES, etc.) or any user-provided object.
1418d382aafbSBarry Smith 
1419d382aafbSBarry Smith    The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to
142020de1f94SBarry Smith    work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading)
1421d382aafbSBarry Smith    enabled.
1422d382aafbSBarry Smith 
1423d382aafbSBarry Smith    Concepts: objects^composing functions
1424d382aafbSBarry Smith    Concepts: composing functions
1425d382aafbSBarry Smith    Concepts: functions^querying
1426d382aafbSBarry Smith    Concepts: objects^querying
1427d382aafbSBarry Smith    Concepts: querying objects
1428d382aafbSBarry Smith 
1429d382aafbSBarry Smith .seealso: PetscObjectQueryFunction()
1430d382aafbSBarry Smith M*/
1431d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1432d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0)
1433d382aafbSBarry Smith #else
1434d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d))
1435d382aafbSBarry Smith #endif
1436d382aafbSBarry Smith 
14377087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQueryFunction(PetscObject,const char[],void (**)(void));
14387087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetOptionsPrefix(PetscObject,const char[]);
14397087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
14407087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
14417087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
14427087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAMSPublish(PetscObject);
14437087cfbeSBarry Smith extern PetscErrorCode  PetscObjectUnPublish(PetscObject);
14447087cfbeSBarry Smith extern PetscErrorCode  PetscObjectChangeTypeName(PetscObject,const char[]);
14457087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroy(PetscObject);
14467087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroyAll(void);
14477087cfbeSBarry Smith extern PetscErrorCode  PetscObjectName(PetscObject);
14487087cfbeSBarry Smith extern PetscErrorCode  PetscTypeCompare(PetscObject,const char[],PetscBool *);
14492b12f010SJed Brown extern PetscErrorCode  PetscTypeCompareAny(PetscObject,PetscBool*,const char[],...);
14507087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalize(PetscErrorCode (*)(void));
14517087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalizeAll(void);
1452d382aafbSBarry Smith 
1453d382aafbSBarry Smith /*
1454d382aafbSBarry Smith     Defines PETSc error handling.
1455d382aafbSBarry Smith */
1456d382aafbSBarry Smith #include "petscerror.h"
1457d382aafbSBarry Smith 
1458d382aafbSBarry Smith /*S
1459503cfb0cSBarry Smith      PetscOList - Linked list of PETSc objects, each accessable by string name
1460d382aafbSBarry Smith 
14611d0fab5eSBarry Smith    Level: developer
1462d382aafbSBarry Smith 
14631d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
14641d0fab5eSBarry Smith 
14651d0fab5eSBarry Smith .seealso:  PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery()
1466d382aafbSBarry Smith S*/
1467d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList;
1468d382aafbSBarry Smith 
1469fcfd50ebSBarry Smith extern PetscErrorCode  PetscOListDestroy(PetscOList*);
14707087cfbeSBarry Smith extern PetscErrorCode  PetscOListFind(PetscOList,const char[],PetscObject*);
1471bfec8eecSBarry Smith extern PetscErrorCode  PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*);
14727087cfbeSBarry Smith extern PetscErrorCode  PetscOListAdd(PetscOList *,const char[],PetscObject);
14736ba4bc90SBarry Smith extern PetscErrorCode  PetscOListRemoveReference(PetscOList *,const char[]);
14747087cfbeSBarry Smith extern PetscErrorCode  PetscOListDuplicate(PetscOList,PetscOList *);
1475d382aafbSBarry Smith 
1476d382aafbSBarry Smith /*
1477503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1478d382aafbSBarry Smith   link libraries that will be loaded as needed.
1479d382aafbSBarry Smith */
14807087cfbeSBarry Smith extern PetscErrorCode  PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void));
14817087cfbeSBarry Smith extern PetscErrorCode  PetscFListDestroy(PetscFList*);
14824b91b6eaSBarry Smith extern PetscErrorCode  PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void));
14837087cfbeSBarry Smith extern PetscErrorCode  PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]);
1484d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1485d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0)
1486d382aafbSBarry Smith #else
1487d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c)
1488d382aafbSBarry Smith #endif
14897087cfbeSBarry Smith extern PetscErrorCode  PetscFListDuplicate(PetscFList,PetscFList *);
14907087cfbeSBarry Smith extern PetscErrorCode  PetscFListView(PetscFList,PetscViewer);
14917087cfbeSBarry Smith extern PetscErrorCode  PetscFListConcat(const char [],const char [],char []);
14927087cfbeSBarry Smith extern PetscErrorCode  PetscFListGet(PetscFList,char ***,int*);
1493d382aafbSBarry Smith 
1494d382aafbSBarry Smith /*S
1495d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1496d382aafbSBarry Smith 
1497d382aafbSBarry Smith    Level: advanced
1498d382aafbSBarry Smith 
149920de1f94SBarry Smith    --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries
1500d382aafbSBarry Smith 
1501d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1502d382aafbSBarry Smith S*/
1503d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
15047087cfbeSBarry Smith extern  PetscDLLibrary DLLibrariesLoaded;
15057087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
15067087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
15077087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
15087087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrintPath(PetscDLLibrary);
15097087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
15107087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
15117087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryClose(PetscDLLibrary);
15127087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryCCAAppend(MPI_Comm,PetscDLLibrary *,const char[]);
1513d382aafbSBarry Smith 
1514d382aafbSBarry Smith /*
151505846914SDmitry Karpeev   PetscFwk support.  Needs to be documented.
151605846914SDmitry Karpeev   Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc.
151705846914SDmitry Karpeev */
151805846914SDmitry Karpeev #include "petscfwk.h"
151905846914SDmitry Karpeev 
152005846914SDmitry Karpeev /*
1521d382aafbSBarry Smith      Useful utility routines
1522d382aafbSBarry Smith */
15237087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
15247087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
15257087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1526d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(MPI_Comm comm),(comm,1))
1527d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(void),(PETSC_COMM_WORLD,1))
15287087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1529d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(MPI_Comm comm),(comm,1))
1530d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(void),(PETSC_COMM_WORLD,1))
15317087cfbeSBarry Smith extern PetscErrorCode  PetscBarrier(PetscObject);
15327087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDump(FILE*);
1533d382aafbSBarry Smith 
1534503cfb0cSBarry Smith /*
1535ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1536503cfb0cSBarry Smith 
1537503cfb0cSBarry Smith     Notes: This is useful in cases like
1538503cfb0cSBarry Smith $     int        *a;
1539ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
1540ace3abfcSBarry Smith      where !a does not return a PetscBool  because we cannot provide a cast from int to PetscBool  in C.
1541503cfb0cSBarry Smith */
1542d382aafbSBarry Smith  #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1543503cfb0cSBarry Smith 
1544d382aafbSBarry Smith /*
1545d382aafbSBarry Smith     Defines basic graphics available from PETSc.
1546d382aafbSBarry Smith */
1547d382aafbSBarry Smith #include "petscdraw.h"
1548d382aafbSBarry Smith 
1549d382aafbSBarry Smith /*
1550d382aafbSBarry Smith     Defines the base data structures for all PETSc objects
1551d382aafbSBarry Smith */
1552d382aafbSBarry Smith #include "private/petscimpl.h"
1553503cfb0cSBarry Smith 
1554238ccf28SShri Abhyankar 
1555d382aafbSBarry Smith /*MC
1556d382aafbSBarry Smith     PetscErrorPrintf - Prints error messages.
1557d382aafbSBarry Smith 
1558d382aafbSBarry Smith    Synopsis:
1559d382aafbSBarry Smith      PetscErrorCode (*PetscErrorPrintf)(const char format[],...);
1560d382aafbSBarry Smith 
1561eca87e8dSBarry Smith     Not Collective
1562eca87e8dSBarry Smith 
1563d382aafbSBarry Smith     Input Parameters:
1564d382aafbSBarry Smith .   format - the usual printf() format string
1565d382aafbSBarry Smith 
1566d382aafbSBarry Smith    Options Database Keys:
1567d382aafbSBarry Smith +    -error_output_stdout - cause error messages to be printed to stdout instead of the
1568d382aafbSBarry Smith          (default) stderr
1569d382aafbSBarry Smith -    -error_output_none to turn off all printing of error messages (does not change the way the
1570d382aafbSBarry Smith           error is handled.)
1571d382aafbSBarry Smith 
1572d382aafbSBarry Smith    Notes: Use
1573d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the
1574d382aafbSBarry Smith $                        error is handled.) and
1575d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on
1576c9a19010SBarry Smith $        of you can use your own function
1577d382aafbSBarry Smith 
1578d382aafbSBarry Smith           Use
1579d382aafbSBarry Smith      PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file.
1580d382aafbSBarry Smith      PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file.
1581d382aafbSBarry Smith 
1582d382aafbSBarry Smith           Use
1583d382aafbSBarry Smith       PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print
1584d382aafbSBarry Smith 
1585d382aafbSBarry Smith    Level: developer
1586d382aafbSBarry Smith 
1587d382aafbSBarry Smith     Fortran Note:
1588d382aafbSBarry Smith     This routine is not supported in Fortran.
1589d382aafbSBarry Smith 
1590d382aafbSBarry Smith     Concepts: error messages^printing
1591d382aafbSBarry Smith     Concepts: printing^error messages
1592d382aafbSBarry Smith 
1593c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf()
1594d382aafbSBarry Smith M*/
15957087cfbeSBarry Smith extern  PetscErrorCode (*PetscErrorPrintf)(const char[],...);
1596d382aafbSBarry Smith 
1597d382aafbSBarry Smith /*MC
1598d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1599d382aafbSBarry Smith 
1600d382aafbSBarry Smith    Synopsis:
1601d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1602d382aafbSBarry Smith 
1603eca87e8dSBarry Smith     Not Collective
1604eca87e8dSBarry Smith 
1605d382aafbSBarry Smith     Input Parameters:
1606d382aafbSBarry Smith .   format - the usual printf() format string
1607d382aafbSBarry Smith 
1608d382aafbSBarry Smith    Level: developer
1609d382aafbSBarry Smith 
1610d382aafbSBarry Smith     Fortran Note:
1611d382aafbSBarry Smith     This routine is not supported in Fortran.
1612d382aafbSBarry Smith 
1613d382aafbSBarry Smith     Concepts: help messages^printing
1614d382aafbSBarry Smith     Concepts: printing^help messages
1615d382aafbSBarry Smith 
1616d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1617d382aafbSBarry Smith M*/
16187087cfbeSBarry Smith extern  PetscErrorCode  (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1619d382aafbSBarry Smith 
1620fcfd50ebSBarry Smith /*
1621fcfd50ebSBarry Smith      Defines PETSc profiling.
1622fcfd50ebSBarry Smith */
1623fcfd50ebSBarry Smith #include "petsclog.h"
1624fcfd50ebSBarry Smith 
1625fcfd50ebSBarry Smith /*
1626fcfd50ebSBarry Smith           For locking, unlocking and destroying AMS memories associated with  PETSc objects. ams.h is included in petscviewer.h
1627fcfd50ebSBarry Smith */
1628fcfd50ebSBarry Smith #if defined(PETSC_HAVE_AMS)
1629fcfd50ebSBarry Smith extern PetscBool  PetscAMSPublishAll;
1630fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)  ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem))
1631fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem))
1632fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)   ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1;
1633fcfd50ebSBarry Smith #else
1634fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)   0
1635fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj)  0
1636fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)      0
1637fcfd50ebSBarry Smith #endif
1638fcfd50ebSBarry Smith 
1639fcfd50ebSBarry Smith /*
1640fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1641fcfd50ebSBarry Smith */
1642fcfd50ebSBarry Smith extern PetscErrorCode   PetscFixFilename(const char[],char[]);
1643fcfd50ebSBarry Smith extern PetscErrorCode   PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1644fcfd50ebSBarry Smith extern PetscErrorCode   PetscFClose(MPI_Comm,FILE*);
1645fcfd50ebSBarry Smith extern PetscErrorCode   PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1646fcfd50ebSBarry Smith extern PetscErrorCode   PetscPrintf(MPI_Comm,const char[],...);
1647fcfd50ebSBarry Smith extern PetscErrorCode   PetscSNPrintf(char*,size_t,const char [],...);
1648257d2499SJed Brown extern PetscErrorCode   PetscSNPrintfCount(char*,size_t,const char [],size_t*,...);
1649fcfd50ebSBarry Smith 
1650fcfd50ebSBarry Smith 
1651fcfd50ebSBarry Smith 
1652fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/
1653fcfd50ebSBarry Smith #include <stdarg.h>
1654fcfd50ebSBarry Smith extern PetscErrorCode   PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
1655fcfd50ebSBarry Smith extern PetscErrorCode   (*PetscVFPrintf)(FILE*,const char[],va_list);
1656fcfd50ebSBarry Smith extern PetscErrorCode   PetscVFPrintfDefault(FILE*,const char[],va_list);
1657fcfd50ebSBarry Smith 
1658fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE)
1659fcfd50ebSBarry Smith extern PetscErrorCode  PetscVFPrintf_Matlab(FILE*,const char[],va_list);
1660fcfd50ebSBarry Smith #endif
1661fcfd50ebSBarry Smith 
166209573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfDefault(const char [],...);
166309573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfNone(const char [],...);
166409573ac7SBarry Smith extern PetscErrorCode  PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1665d382aafbSBarry Smith 
1666d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
16677087cfbeSBarry Smith extern PetscErrorCode   PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
16687087cfbeSBarry Smith extern PetscErrorCode   PetscPClose(MPI_Comm,FILE*);
1669d382aafbSBarry Smith #endif
1670d382aafbSBarry Smith 
16717087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedPrintf(MPI_Comm,const char[],...);
16727087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
16737087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFlush(MPI_Comm);
16747087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
16757087cfbeSBarry Smith extern PetscErrorCode   PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
16767087cfbeSBarry Smith extern PetscErrorCode   PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
16777087cfbeSBarry Smith extern PetscErrorCode   PetscGetPetscDir(const char*[]);
1678d382aafbSBarry Smith 
16797087cfbeSBarry Smith extern PetscErrorCode   PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1680d382aafbSBarry Smith 
1681d382aafbSBarry Smith /*S
1682d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1683d382aafbSBarry Smith 
1684d382aafbSBarry Smith    Level: advanced
1685d382aafbSBarry Smith 
1686d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1687d382aafbSBarry Smith S*/
16887087cfbeSBarry Smith extern PetscClassId  PETSC_CONTAINER_CLASSID;
1689d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
16907087cfbeSBarry Smith extern PetscErrorCode  PetscContainerGetPointer(PetscContainer,void **);
16917087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetPointer(PetscContainer,void *);
1692fcfd50ebSBarry Smith extern PetscErrorCode  PetscContainerDestroy(PetscContainer*);
16937087cfbeSBarry Smith extern PetscErrorCode  PetscContainerCreate(MPI_Comm,PetscContainer *);
16947087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1695d382aafbSBarry Smith 
1696d382aafbSBarry Smith /*
1697d382aafbSBarry Smith    For use in debuggers
1698d382aafbSBarry Smith */
16997087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalRank;
17007087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalSize;
17017087cfbeSBarry Smith extern PetscErrorCode  PetscIntView(PetscInt,const PetscInt[],PetscViewer);
17027087cfbeSBarry Smith extern PetscErrorCode  PetscRealView(PetscInt,const PetscReal[],PetscViewer);
17037087cfbeSBarry Smith extern PetscErrorCode  PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1704d382aafbSBarry Smith 
1705d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H)
1706d382aafbSBarry Smith #include <memory.h>
1707d382aafbSBarry Smith #endif
1708d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1709d382aafbSBarry Smith #include <stdlib.h>
1710d382aafbSBarry Smith #endif
1711d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H)
1712d382aafbSBarry Smith #include <strings.h>
1713d382aafbSBarry Smith #endif
1714d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H)
1715d382aafbSBarry Smith #include <string.h>
1716d382aafbSBarry Smith #endif
17176c7e564aSBarry Smith 
17186c7e564aSBarry Smith 
1719d382aafbSBarry Smith #if defined(PETSC_HAVE_XMMINTRIN_H)
1720d382aafbSBarry Smith #include <xmmintrin.h>
1721d382aafbSBarry Smith #endif
1722d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H)
1723d382aafbSBarry Smith #include <stdint.h>
1724d382aafbSBarry Smith #endif
1725d382aafbSBarry Smith 
1726fcfd50ebSBarry Smith #undef __FUNCT__
1727fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy"
1728d382aafbSBarry Smith /*@C
1729d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1730d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1731d382aafbSBarry Smith    PetscMemmove() in that case.
1732d382aafbSBarry Smith 
1733d382aafbSBarry Smith    Not Collective
1734d382aafbSBarry Smith 
1735d382aafbSBarry Smith    Input Parameters:
1736d382aafbSBarry Smith +  b - pointer to initial memory space
1737d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1738d382aafbSBarry Smith 
1739d382aafbSBarry Smith    Output Parameter:
1740d382aafbSBarry Smith .  a - pointer to copy space
1741d382aafbSBarry Smith 
1742d382aafbSBarry Smith    Level: intermediate
1743d382aafbSBarry Smith 
1744d382aafbSBarry Smith    Compile Option:
1745d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1746d382aafbSBarry Smith                                   for memory copies on double precision values.
1747d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1748d382aafbSBarry Smith                                   for memory copies on double precision values.
1749d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1750d382aafbSBarry Smith                                   for memory copies on double precision values.
1751d382aafbSBarry Smith 
1752d382aafbSBarry Smith    Note:
1753d382aafbSBarry Smith    This routine is analogous to memcpy().
1754d382aafbSBarry Smith 
1755503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1756503cfb0cSBarry Smith 
1757d382aafbSBarry Smith   Concepts: memory^copying
1758d382aafbSBarry Smith   Concepts: copying^memory
1759d382aafbSBarry Smith 
1760d382aafbSBarry Smith .seealso: PetscMemmove()
1761d382aafbSBarry Smith 
1762d382aafbSBarry Smith @*/
17637087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemcpy(void *a,const void *b,size_t n)
1764d382aafbSBarry Smith {
1765d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1766d382aafbSBarry Smith   unsigned long al = (unsigned long) a,bl = (unsigned long) b;
1767d382aafbSBarry Smith   unsigned long nl = (unsigned long) n;
1768a7e36092SMatthew G Knepley   PetscFunctionBegin;
1769e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1770e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1771a7e36092SMatthew G Knepley #else
1772d382aafbSBarry Smith   PetscFunctionBegin;
1773a7e36092SMatthew G Knepley #endif
1774d382aafbSBarry Smith   if (a != b) {
1775d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1776d382aafbSBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl) {
1777e32f2f54SBarry Smith       SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1778d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1779d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1780d382aafbSBarry Smith     }
1781d382aafbSBarry Smith #endif
1782d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1783d382aafbSBarry Smith    if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1784d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1785d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1786d382aafbSBarry Smith       PetscBLASInt one = 1,blen = PetscBLASIntCast(len);
1787d382aafbSBarry Smith       BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one);
1788d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1789d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1790d382aafbSBarry Smith #else
1791d382aafbSBarry Smith       size_t      i;
1792d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1793d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1794d382aafbSBarry Smith #endif
1795d382aafbSBarry Smith     } else {
1796d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1797d382aafbSBarry Smith     }
1798d382aafbSBarry Smith #else
1799d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1800d382aafbSBarry Smith #endif
1801d382aafbSBarry Smith   }
1802d382aafbSBarry Smith   PetscFunctionReturn(0);
1803d382aafbSBarry Smith }
1804d382aafbSBarry Smith 
1805d382aafbSBarry Smith /*@C
1806d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1807d382aafbSBarry Smith 
1808d382aafbSBarry Smith    Not Collective
1809d382aafbSBarry Smith 
1810d382aafbSBarry Smith    Input Parameters:
1811d382aafbSBarry Smith +  a - pointer to beginning memory location
1812d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1813d382aafbSBarry Smith 
1814d382aafbSBarry Smith    Level: intermediate
1815d382aafbSBarry Smith 
1816d382aafbSBarry Smith    Compile Option:
1817d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1818d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1819d382aafbSBarry Smith 
1820503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1821503cfb0cSBarry Smith 
1822d382aafbSBarry Smith    Concepts: memory^zeroing
1823d382aafbSBarry Smith    Concepts: zeroing^memory
1824d382aafbSBarry Smith 
1825d382aafbSBarry Smith .seealso: PetscMemcpy()
1826d382aafbSBarry Smith @*/
18277087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1828d382aafbSBarry Smith {
1829d382aafbSBarry Smith   if (n > 0) {
1830d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1831e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1832d382aafbSBarry Smith #endif
1833d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1834d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1835d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1836d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1837d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1838d382aafbSBarry Smith     } else {
1839d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1840d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1841d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1842d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1843d382aafbSBarry Smith     } else {
1844d382aafbSBarry Smith #endif
1845d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1846d382aafbSBarry Smith       bzero((char *)a,n);
1847d382aafbSBarry Smith #else
1848d382aafbSBarry Smith       memset((char*)a,0,n);
1849d382aafbSBarry Smith #endif
1850d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1851d382aafbSBarry Smith     }
1852d382aafbSBarry Smith #endif
1853d382aafbSBarry Smith   }
1854d382aafbSBarry Smith   return 0;
1855d382aafbSBarry Smith }
1856d382aafbSBarry Smith 
1857d382aafbSBarry Smith /*MC
1858d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1859d382aafbSBarry Smith 
1860eca87e8dSBarry Smith    Synopsis:
1861eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1862eca87e8dSBarry Smith 
1863d382aafbSBarry Smith    Not Collective
1864d382aafbSBarry Smith 
1865d382aafbSBarry Smith    Input Parameters:
1866d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1867d382aafbSBarry Smith .  n - number of elements to fetch
1868d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
186950d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1870d382aafbSBarry Smith 
1871d382aafbSBarry Smith    Level: developer
1872d382aafbSBarry Smith 
1873d382aafbSBarry Smith    Notes:
1874d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1875d382aafbSBarry Smith 
187650d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
187750d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
187850d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
187963cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
188063cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
188163cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1882d382aafbSBarry Smith 
1883d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1884d382aafbSBarry Smith    address).
1885d382aafbSBarry Smith 
1886d382aafbSBarry Smith    Concepts: memory
1887d382aafbSBarry Smith M*/
1888d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1889d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1890d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1891d382aafbSBarry Smith   } while (0)
1892d382aafbSBarry Smith 
1893d382aafbSBarry Smith /*
1894e3c5b3baSBarry Smith     Allows accessing MATLAB Engine
1895d382aafbSBarry Smith */
1896d382aafbSBarry Smith #include "petscmatlab.h"
1897d382aafbSBarry Smith 
1898d382aafbSBarry Smith /*
1899d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1900d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1901d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1902d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1903e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1904d382aafbSBarry Smith */
1905d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1906d382aafbSBarry Smith 
1907d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1908d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1909d382aafbSBarry Smith #endif
1910d382aafbSBarry Smith 
19115a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
19125a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1913d382aafbSBarry Smith #endif
1914d382aafbSBarry Smith 
1915d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1916d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1917d382aafbSBarry Smith #endif
1918d382aafbSBarry Smith 
1919d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1920d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1921d382aafbSBarry Smith #endif
1922d382aafbSBarry Smith 
1923d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1924d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1925d382aafbSBarry Smith #endif
1926d382aafbSBarry Smith 
1927d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1928d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1929d382aafbSBarry Smith #endif
1930d382aafbSBarry Smith 
1931d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1932d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1933d382aafbSBarry Smith #endif
1934d382aafbSBarry Smith 
1935d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1936d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1937d382aafbSBarry Smith #endif
1938d382aafbSBarry Smith 
1939d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1940d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1941d382aafbSBarry Smith #endif
1942d382aafbSBarry Smith 
1943d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1944d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1945d382aafbSBarry Smith #endif
1946d382aafbSBarry Smith 
1947d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1948d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1949d382aafbSBarry Smith #endif
1950d382aafbSBarry Smith 
1951d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1952d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1953d382aafbSBarry Smith #endif
1954d382aafbSBarry Smith 
1955d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1956d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1957d382aafbSBarry Smith #endif
1958d382aafbSBarry Smith 
1959d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1960d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1961d382aafbSBarry Smith #endif
1962d382aafbSBarry Smith 
1963d382aafbSBarry Smith #endif
1964d382aafbSBarry Smith 
1965d382aafbSBarry Smith /*
1966d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1967d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1968d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1969d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
1970d382aafbSBarry Smith    ugly extern "C" {} wrappers.
1971d382aafbSBarry Smith */
1972d382aafbSBarry Smith #if defined(__cplusplus)
1973d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
1974d382aafbSBarry Smith #define EXTERN_C_END }
1975d382aafbSBarry Smith #else
1976d382aafbSBarry Smith #define EXTERN_C_BEGIN
1977d382aafbSBarry Smith #define EXTERN_C_END
1978d382aafbSBarry Smith #endif
1979d382aafbSBarry Smith 
1980d382aafbSBarry Smith /* --------------------------------------------------------------------*/
1981d382aafbSBarry Smith 
1982d382aafbSBarry Smith /*MC
1983d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
1984d382aafbSBarry Smith         communication
1985d382aafbSBarry Smith 
1986d382aafbSBarry Smith    Level: beginner
1987d382aafbSBarry Smith 
1988d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
1989d382aafbSBarry Smith 
1990d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
1991d382aafbSBarry Smith M*/
1992d382aafbSBarry Smith 
1993d382aafbSBarry Smith /*MC
1994d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
1995d382aafbSBarry Smith        complex number, a single precision real number, a long double or an int - if the code is configured
1996d382aafbSBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle
1997d382aafbSBarry Smith 
1998d382aafbSBarry Smith 
1999d382aafbSBarry Smith    Level: beginner
2000d382aafbSBarry Smith 
2001d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt
2002d382aafbSBarry Smith M*/
2003d382aafbSBarry Smith 
2004d382aafbSBarry Smith /*MC
2005d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
2006d382aafbSBarry Smith 
2007d382aafbSBarry Smith    Level: beginner
2008d382aafbSBarry Smith 
2009d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar
2010d382aafbSBarry Smith M*/
2011d382aafbSBarry Smith 
2012d382aafbSBarry Smith /*MC
2013d382aafbSBarry Smith     PassiveScalar - PETSc type that represents a PetscScalar
2014d382aafbSBarry Smith    Level: beginner
2015d382aafbSBarry Smith 
2016d382aafbSBarry Smith     This is the same as a PetscScalar except in code that is automatically differentiated it is
2017d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
2018d382aafbSBarry Smith 
2019d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar
2020d382aafbSBarry Smith M*/
2021d382aafbSBarry Smith 
2022d382aafbSBarry Smith /*MC
2023d382aafbSBarry Smith     PassiveReal - PETSc type that represents a PetscReal
2024d382aafbSBarry Smith 
2025d382aafbSBarry Smith    Level: beginner
2026d382aafbSBarry Smith 
2027d382aafbSBarry Smith     This is the same as a PetscReal except in code that is automatically differentiated it is
2028d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
2029d382aafbSBarry Smith 
2030d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar
2031d382aafbSBarry Smith M*/
2032d382aafbSBarry Smith 
2033d382aafbSBarry Smith /*MC
2034d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
2035d382aafbSBarry Smith 
2036d382aafbSBarry Smith    Level: beginner
2037d382aafbSBarry Smith 
2038d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
2039d382aafbSBarry Smith           pass this value
2040d382aafbSBarry Smith 
2041d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT
2042d382aafbSBarry Smith M*/
2043d382aafbSBarry Smith 
2044d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
2045d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
2046d382aafbSBarry Smith extern PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2047d382aafbSBarry Smith extern PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2048d382aafbSBarry Smith #else
2049d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
2050d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
2051d382aafbSBarry Smith #endif
2052d382aafbSBarry Smith #endif
2053d382aafbSBarry Smith 
2054d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
2055d382aafbSBarry Smith 
2056d382aafbSBarry Smith /* Limit MPI to 32-bits */
2057d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
2058d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
2059d382aafbSBarry Smith /* Limit BLAS to 32-bits */
2060d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
2061d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
2062d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */
2063d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX  2147483647
2064d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647
2065d382aafbSBarry Smith 
2066d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
2067e32f2f54SBarry Smith #define PetscMPIIntCheck(a)  if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI")
2068e32f2f54SBarry Smith #define PetscBLASIntCheck(a)  if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK")
2069eb10ad5fSJed Brown #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a)
2070eb10ad5fSJed Brown #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a)
2071d382aafbSBarry Smith 
2072d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4)
2073e32f2f54SBarry Smith #define PetscHDF5IntCheck(a)  if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5")
2074eb10ad5fSJed Brown #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a)
2075d382aafbSBarry Smith #else
2076d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2077d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2078d382aafbSBarry Smith #endif
2079d382aafbSBarry Smith 
2080d382aafbSBarry Smith #else
2081d382aafbSBarry Smith #define PetscMPIIntCheck(a)
2082d382aafbSBarry Smith #define PetscBLASIntCheck(a)
2083d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2084d382aafbSBarry Smith #define PetscMPIIntCast(a) a
2085d382aafbSBarry Smith #define PetscBLASIntCast(a) a
2086d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2087d382aafbSBarry Smith #endif
2088d382aafbSBarry Smith 
2089d382aafbSBarry Smith 
2090d382aafbSBarry Smith /*
2091d382aafbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used
2092d382aafbSBarry Smith    as a regular user variable.
2093d382aafbSBarry Smith */
2094d382aafbSBarry Smith #if defined(hz)
2095d382aafbSBarry Smith #undef hz
2096d382aafbSBarry Smith #endif
2097d382aafbSBarry Smith 
2098d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
2099d382aafbSBarry Smith 
2100d382aafbSBarry Smith 
2101d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
2102d382aafbSBarry Smith #include <limits.h>
2103d382aafbSBarry Smith #endif
2104d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
2105d382aafbSBarry Smith #include <sys/param.h>
2106d382aafbSBarry Smith #endif
2107d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
2108d382aafbSBarry Smith #include <sys/types.h>
2109d382aafbSBarry Smith #endif
2110d382aafbSBarry Smith #if defined(MAXPATHLEN)
2111d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
2112d382aafbSBarry Smith #elif defined(MAX_PATH)
2113d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
2114d382aafbSBarry Smith #elif defined(_MAX_PATH)
2115d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
2116d382aafbSBarry Smith #else
2117d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
2118d382aafbSBarry Smith #endif
2119d382aafbSBarry Smith 
2120d382aafbSBarry Smith /* Special support for C++ */
2121d382aafbSBarry Smith #include "petscsys.hh"
21226c7e564aSBarry Smith 
2123d382aafbSBarry Smith 
2124d382aafbSBarry Smith /*MC
2125d382aafbSBarry Smith 
2126d382aafbSBarry Smith     UsingFortran - Fortran can be used with PETSc in four distinct approaches
2127d382aafbSBarry Smith 
2128d382aafbSBarry Smith $    1) classic Fortran 77 style
2129d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc
2130d382aafbSBarry Smith $       XXX variablename
2131d382aafbSBarry Smith $      You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines
2132d382aafbSBarry Smith $      which end in F90; such as VecGetArrayF90()
2133d382aafbSBarry Smith $
2134d382aafbSBarry Smith $    2) classic Fortran 90 style
2135d1716517SSatish Balay $#include "finclude/petscXXX.h"
2136d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc
2137d382aafbSBarry Smith $       XXX variablename
2138d382aafbSBarry Smith $
2139d382aafbSBarry Smith $    3) Using Fortran modules
2140d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2141d382aafbSBarry Smith $         use petscXXXX
2142d382aafbSBarry Smith $       XXX variablename
2143d382aafbSBarry Smith $
2144d382aafbSBarry Smith $    4) Use Fortran modules and Fortran data types for PETSc types
2145d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2146d382aafbSBarry Smith $         use petscXXXX
2147d382aafbSBarry Smith $       type(XXX) variablename
2148e2e64c6bSBarry Smith $      To use this approach you must ./configure PETSc with the additional
2149d382aafbSBarry Smith $      option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules
2150d382aafbSBarry Smith 
2151d382aafbSBarry Smith     Finally if you absolutely do not want to use any #include you can use either
2152d382aafbSBarry Smith 
2153d382aafbSBarry Smith $    3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc
2154d382aafbSBarry Smith $        and you must declare the variables as integer, for example
2155d382aafbSBarry Smith $        integer variablename
2156d382aafbSBarry Smith $
2157d382aafbSBarry Smith $    4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type
2158d382aafbSBarry Smith $        names like PetscErrorCode, PetscInt etc. again for those you must use integer
2159d382aafbSBarry Smith 
2160d382aafbSBarry Smith    We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking
2161d382aafbSBarry Smith for only a few PETSc functions.
2162d382aafbSBarry Smith 
2163d382aafbSBarry Smith    Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value
2164d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues()
2165d382aafbSBarry Smith you cannot have something like
2166d382aafbSBarry Smith $      PetscInt row,col
2167d382aafbSBarry Smith $      PetscScalar val
2168d382aafbSBarry Smith $        ...
2169d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2170d382aafbSBarry Smith You must instead have
2171d382aafbSBarry Smith $      PetscInt row(1),col(1)
2172d382aafbSBarry Smith $      PetscScalar val(1)
2173d382aafbSBarry Smith $        ...
2174d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2175d382aafbSBarry Smith 
2176d382aafbSBarry Smith 
2177d382aafbSBarry Smith     See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches
2178d382aafbSBarry Smith 
2179d382aafbSBarry Smith     Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these
2180d382aafbSBarry Smith      automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h
2181d382aafbSBarry Smith 
2182d382aafbSBarry Smith      The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include
2183d382aafbSBarry Smith      their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors;  for example
2184d382aafbSBarry Smith      finclude/petscvec.h does NOT automatically include finclude/petscis.h
2185d382aafbSBarry Smith 
2186d382aafbSBarry Smith      The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the
2187e2e64c6bSBarry Smith      Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option.
2188d382aafbSBarry Smith 
2189d382aafbSBarry Smith      The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for
2190d382aafbSBarry Smith      the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90).
2191d382aafbSBarry Smith 
2192d382aafbSBarry Smith      The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated
2193d382aafbSBarry Smith      automatically by "make allfortranstubs".
2194d382aafbSBarry Smith 
2195e2e64c6bSBarry Smith      The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure
2196d382aafbSBarry Smith      was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
2197d382aafbSBarry Smith      include their predecessors
2198d382aafbSBarry Smith 
2199d382aafbSBarry Smith     Level: beginner
2200d382aafbSBarry Smith 
2201d382aafbSBarry Smith M*/
2202d382aafbSBarry Smith 
22037087cfbeSBarry Smith extern PetscErrorCode  PetscGetArchType(char[],size_t);
22047087cfbeSBarry Smith extern PetscErrorCode  PetscGetHostName(char[],size_t);
22057087cfbeSBarry Smith extern PetscErrorCode  PetscGetUserName(char[],size_t);
22067087cfbeSBarry Smith extern PetscErrorCode  PetscGetProgramName(char[],size_t);
22077087cfbeSBarry Smith extern PetscErrorCode  PetscSetProgramName(const char[]);
22087087cfbeSBarry Smith extern PetscErrorCode  PetscGetDate(char[],size_t);
2209d382aafbSBarry Smith 
22107087cfbeSBarry Smith extern PetscErrorCode  PetscSortInt(PetscInt,PetscInt[]);
22117087cfbeSBarry Smith extern PetscErrorCode  PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
22127087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
22137087cfbeSBarry Smith extern PetscErrorCode  PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
22147087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
22157087cfbeSBarry Smith extern PetscErrorCode  PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
22167087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
22177087cfbeSBarry Smith extern PetscErrorCode  PetscSortReal(PetscInt,PetscReal[]);
22187087cfbeSBarry Smith extern PetscErrorCode  PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
22197087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
22207087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
22217087cfbeSBarry Smith extern PetscErrorCode  PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
2222d382aafbSBarry Smith 
22237087cfbeSBarry Smith extern PetscErrorCode  PetscSetDisplay(void);
22247087cfbeSBarry Smith extern PetscErrorCode  PetscGetDisplay(char[],size_t);
2225d382aafbSBarry Smith 
2226d382aafbSBarry Smith /*E
2227d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2228d382aafbSBarry Smith        with an optional dynamic library name, for example
2229d382aafbSBarry Smith        http://www.mcs.anl.gov/petsc/lib.a:myrandcreate()
2230d382aafbSBarry Smith 
2231d382aafbSBarry Smith    Level: beginner
2232d382aafbSBarry Smith 
2233e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2234d382aafbSBarry Smith    with the option --download-sprng
2235d382aafbSBarry Smith 
2236d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom
2237d382aafbSBarry Smith E*/
2238d382aafbSBarry Smith #define PetscRandomType char*
2239d382aafbSBarry Smith #define PETSCRAND       "rand"
2240d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2241d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2242d382aafbSBarry Smith 
2243d382aafbSBarry Smith /* Logging support */
22447087cfbeSBarry Smith extern  PetscClassId PETSC_RANDOM_CLASSID;
2245d382aafbSBarry Smith 
22467087cfbeSBarry Smith extern PetscErrorCode  PetscRandomInitializePackage(const char[]);
2247d382aafbSBarry Smith 
2248d382aafbSBarry Smith /*S
2249d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2250d382aafbSBarry Smith 
2251d382aafbSBarry Smith    Level: intermediate
2252d382aafbSBarry Smith 
2253d382aafbSBarry Smith   Concepts: random numbers
2254d382aafbSBarry Smith 
2255d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2256d382aafbSBarry Smith S*/
2257d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2258d382aafbSBarry Smith 
2259d382aafbSBarry Smith /* Dynamic creation and loading functions */
2260d382aafbSBarry Smith extern PetscFList PetscRandomList;
2261ace3abfcSBarry Smith extern PetscBool  PetscRandomRegisterAllCalled;
2262d382aafbSBarry Smith 
22637087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterAll(const char []);
22647087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom));
22657087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterDestroy(void);
22667087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetType(PetscRandom, const PetscRandomType);
22677087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetFromOptions(PetscRandom);
22687087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetType(PetscRandom, const PetscRandomType*);
22697087cfbeSBarry Smith extern PetscErrorCode  PetscRandomViewFromOptions(PetscRandom,char*);
22707087cfbeSBarry Smith extern PetscErrorCode  PetscRandomView(PetscRandom,PetscViewer);
2271d382aafbSBarry Smith 
2272d382aafbSBarry Smith /*MC
2273d382aafbSBarry Smith   PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation
2274d382aafbSBarry Smith 
2275d382aafbSBarry Smith   Synopsis:
22761890ba74SBarry Smith   PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom))
2277d382aafbSBarry Smith 
2278d382aafbSBarry Smith   Not Collective
2279d382aafbSBarry Smith 
2280d382aafbSBarry Smith   Input Parameters:
2281d382aafbSBarry Smith + name        - The name of a new user-defined creation routine
2282d382aafbSBarry Smith . path        - The path (either absolute or relative) of the library containing this routine
2283d382aafbSBarry Smith . func_name   - The name of routine to create method context
2284d382aafbSBarry Smith - create_func - The creation routine itself
2285d382aafbSBarry Smith 
2286d382aafbSBarry Smith   Notes:
2287d382aafbSBarry Smith   PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators
2288d382aafbSBarry Smith 
2289d382aafbSBarry Smith   If dynamic libraries are used, then the fourth input argument (routine_create) is ignored.
2290d382aafbSBarry Smith 
2291d382aafbSBarry Smith   Sample usage:
2292d382aafbSBarry Smith .vb
2293d382aafbSBarry Smith     PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate);
2294d382aafbSBarry Smith .ve
2295d382aafbSBarry Smith 
2296d382aafbSBarry Smith   Then, your random type can be chosen with the procedural interface via
2297d382aafbSBarry Smith .vb
2298d382aafbSBarry Smith     PetscRandomCreate(MPI_Comm, PetscRandom *);
2299d382aafbSBarry Smith     PetscRandomSetType(PetscRandom,"my_random_name");
2300d382aafbSBarry Smith .ve
2301d382aafbSBarry Smith    or at runtime via the option
2302d382aafbSBarry Smith .vb
2303d382aafbSBarry Smith     -random_type my_random_name
2304d382aafbSBarry Smith .ve
2305d382aafbSBarry Smith 
2306d382aafbSBarry Smith   Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values.
2307d382aafbSBarry Smith 
2308d382aafbSBarry Smith          For an example of the code needed to interface your own random number generator see
2309d382aafbSBarry Smith          src/sys/random/impls/rand/rand.c
2310d382aafbSBarry Smith 
2311d382aafbSBarry Smith   Level: advanced
2312d382aafbSBarry Smith 
2313d382aafbSBarry Smith .keywords: PetscRandom, register
2314d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister()
2315d382aafbSBarry Smith M*/
2316d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
2317d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0)
2318d382aafbSBarry Smith #else
2319d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d)
2320d382aafbSBarry Smith #endif
2321d382aafbSBarry Smith 
23227087cfbeSBarry Smith extern PetscErrorCode  PetscRandomCreate(MPI_Comm,PetscRandom*);
23237087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValue(PetscRandom,PetscScalar*);
23247087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValueReal(PetscRandom,PetscReal*);
23257087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
23267087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
23277087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetSeed(PetscRandom,unsigned long);
23287087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetSeed(PetscRandom,unsigned long *);
23297087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSeed(PetscRandom);
2330fcfd50ebSBarry Smith extern PetscErrorCode  PetscRandomDestroy(PetscRandom*);
2331d382aafbSBarry Smith 
23327087cfbeSBarry Smith extern PetscErrorCode  PetscGetFullPath(const char[],char[],size_t);
23337087cfbeSBarry Smith extern PetscErrorCode  PetscGetRelativePath(const char[],char[],size_t);
23347087cfbeSBarry Smith extern PetscErrorCode  PetscGetWorkingDirectory(char[],size_t);
23357087cfbeSBarry Smith extern PetscErrorCode  PetscGetRealPath(const char[],char[]);
23367087cfbeSBarry Smith extern PetscErrorCode  PetscGetHomeDirectory(char[],size_t);
23377087cfbeSBarry Smith extern PetscErrorCode  PetscTestFile(const char[],char,PetscBool *);
23387087cfbeSBarry Smith extern PetscErrorCode  PetscTestDirectory(const char[],char,PetscBool *);
2339d382aafbSBarry Smith 
23407087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryRead(int,void*,PetscInt,PetscDataType);
23417087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
23427087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
23437087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
23447087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryOpen(const char[],PetscFileMode,int *);
23457087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryClose(int);
23467087cfbeSBarry Smith extern PetscErrorCode  PetscSharedTmp(MPI_Comm,PetscBool  *);
23477087cfbeSBarry Smith extern PetscErrorCode  PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
23487087cfbeSBarry Smith extern PetscErrorCode  PetscGetTmp(MPI_Comm,char[],size_t);
23497087cfbeSBarry Smith extern PetscErrorCode  PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
23507087cfbeSBarry Smith extern PetscErrorCode  PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
23517087cfbeSBarry Smith extern PetscErrorCode  PetscOpenSocket(char*,int,int*);
23527087cfbeSBarry Smith extern PetscErrorCode  PetscWebServe(MPI_Comm,int);
2353d382aafbSBarry Smith 
2354d382aafbSBarry Smith /*
2355d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2356d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2357d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2358d382aafbSBarry Smith   PetscBinarySeek().
2359d382aafbSBarry Smith */
2360d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2361d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2362d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2363d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2364d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2365d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2366d382aafbSBarry Smith 
2367d382aafbSBarry Smith /*E
2368d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2369d382aafbSBarry Smith 
2370d382aafbSBarry Smith   Level: advanced
2371d382aafbSBarry Smith 
2372d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2373d382aafbSBarry Smith E*/
2374d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
23757087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
23767087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
2377d382aafbSBarry Smith 
23787087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugTerminal(const char[]);
23797087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugger(const char[],PetscBool );
23807087cfbeSBarry Smith extern PetscErrorCode  PetscSetDefaultDebugger(void);
23817087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebuggerFromString(char*);
23827087cfbeSBarry Smith extern PetscErrorCode  PetscAttachDebugger(void);
23837087cfbeSBarry Smith extern PetscErrorCode  PetscStopForDebugger(void);
2384d382aafbSBarry Smith 
23857087cfbeSBarry Smith extern PetscErrorCode  PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
23867087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
23877087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
23887087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
23897087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2390d382aafbSBarry Smith 
23917087cfbeSBarry Smith extern PetscErrorCode  PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2392d382aafbSBarry Smith 
2393d382aafbSBarry Smith /*E
2394d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2395d382aafbSBarry Smith 
2396d382aafbSBarry Smith   Level: beginner
2397d382aafbSBarry Smith 
2398d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2399d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2400d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2401d382aafbSBarry Smith E*/
240211f088b5SMatthew G Knepley  typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES} InsertMode;
2403d382aafbSBarry Smith 
2404d382aafbSBarry Smith /*MC
2405d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2406d382aafbSBarry Smith 
2407d382aafbSBarry Smith     Level: beginner
2408d382aafbSBarry Smith 
2409d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2410eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2411eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2412d382aafbSBarry Smith 
2413d382aafbSBarry Smith M*/
2414d382aafbSBarry Smith 
2415d382aafbSBarry Smith /*MC
2416d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2417d382aafbSBarry Smith                 value into that location
2418d382aafbSBarry Smith 
2419d382aafbSBarry Smith     Level: beginner
2420d382aafbSBarry Smith 
2421d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2422eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2423eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2424d382aafbSBarry Smith 
2425d382aafbSBarry Smith M*/
2426d382aafbSBarry Smith 
2427d382aafbSBarry Smith /*MC
2428d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2429d382aafbSBarry Smith 
2430d382aafbSBarry Smith     Level: beginner
2431d382aafbSBarry Smith 
2432d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2433d382aafbSBarry Smith 
2434d382aafbSBarry Smith M*/
2435d382aafbSBarry Smith 
2436d382aafbSBarry Smith /*S
2437d382aafbSBarry Smith    PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT
2438d382aafbSBarry Smith 
2439d382aafbSBarry Smith    Level: advanced
2440d382aafbSBarry Smith 
2441d382aafbSBarry Smith    Concepts: communicator, create
2442d382aafbSBarry Smith S*/
2443d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2444d382aafbSBarry Smith 
2445d382aafbSBarry Smith struct _n_PetscSubcomm {
2446d382aafbSBarry Smith   MPI_Comm   parent;      /* parent communicator */
2447d382aafbSBarry Smith   MPI_Comm   dupparent;   /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2448d382aafbSBarry Smith   MPI_Comm   comm;        /* this communicator */
2449d382aafbSBarry Smith   PetscInt   n;           /* num of subcommunicators under the parent communicator */
2450d382aafbSBarry Smith   PetscInt   color;       /* color of processors belong to this communicator */
2451d382aafbSBarry Smith };
2452d382aafbSBarry Smith 
2453638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
2454638faf0bSHong Zhang extern const char *PetscSubcommTypes[];
2455638faf0bSHong Zhang 
24567087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2457fcfd50ebSBarry Smith extern PetscErrorCode  PetscSubcommDestroy(PetscSubcomm*);
24587087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetNumber(PetscSubcomm,PetscInt);
24597087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetType(PetscSubcomm,const PetscSubcommType);
24607087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt);
2461d382aafbSBarry Smith 
2462d382aafbSBarry Smith PETSC_EXTERN_CXX_END
24636c7e564aSBarry Smith 
24649e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */
24659e03d832SJed Brown #undef __FUNCT__
24669e03d832SJed Brown #define __FUNCT__ "User provided function"
24679e03d832SJed Brown 
2468d382aafbSBarry Smith #endif
2469