1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 56c7e564aSBarry Smith #if !defined(__PETSCSYS_H) 66c7e564aSBarry Smith #define __PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 1873fca5a0SBarry Smith /* 1973fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2073fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2173fca5a0SBarry Smith */ 22216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2373fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2473fca5a0SBarry Smith # endif 25216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2673fca5a0SBarry Smith # define _BSD_SOURCE 2773fca5a0SBarry Smith # endif 2807f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 2907f00807SSatish Balay # define _DEFAULT_SOURCE 3007f00807SSatish Balay # endif 31ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 32ea0fecefSShri Abhyankar # define _GNU_SOURCE 33ea0fecefSShri Abhyankar # endif 3473fca5a0SBarry Smith #endif 3573fca5a0SBarry Smith 36df4397b0SStefano Zampini #include <petscsystypes.h> 37df4397b0SStefano Zampini 38d382aafbSBarry Smith /* ========================================================================== */ 39d382aafbSBarry Smith /* 402c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 41d382aafbSBarry Smith */ 421ec50b02SJed Brown #if defined(__cplusplus) 431ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 441ec50b02SJed Brown #else 451ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 461ec50b02SJed Brown #endif 47d382aafbSBarry Smith 48c5e4d11fSDmitry Karpeev /* ========================================================================== */ 49c5e4d11fSDmitry Karpeev /* 50c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 511cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 521cc8b206SBarry Smith file within an extern "C". 53c5e4d11fSDmitry Karpeev */ 54c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 55c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 56c5e4d11fSDmitry Karpeev #endif 57c5e4d11fSDmitry Karpeev 58ed938b00SJed Brown #if defined(__cplusplus) 59ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 60ed938b00SJed Brown #else 61ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 62ed938b00SJed Brown #endif 63ed938b00SJed Brown 64ed938b00SJed Brown #if defined(__cplusplus) 6558c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 66ed938b00SJed Brown #else 6758c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 68ed938b00SJed Brown #endif 69ed938b00SJed Brown 7058c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7158c433abSLisandro Dalcin 72ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 73014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 74014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7521f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 7626703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 7726703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 7826703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 7926703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8026703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 81014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 82014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8321f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 84d382aafbSBarry Smith #else 85014dd563SJed Brown # define PETSC_DLLEXPORT 86014dd563SJed Brown # define PETSC_DLLIMPORT 8721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 88014dd563SJed Brown #endif 89014dd563SJed Brown 90014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 91014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 92014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 93014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 94014dd563SJed Brown #endif 95014dd563SJed Brown 961cc8b206SBarry Smith /* 971cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 981cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 991cc8b206SBarry Smith used from C and are always visible in the shared libraries 1001cc8b206SBarry Smith */ 1012c280183SJed Brown #if defined(__cplusplus) 102014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 103638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10421f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 105014dd563SJed Brown #else 106014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 107638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1086258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 109d382aafbSBarry Smith #endif 11027710113SBarry Smith 1112c8e378dSBarry Smith #include <petscversion.h> 112a8d69d7bSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 113d382aafbSBarry Smith 114d382aafbSBarry Smith /* ========================================================================== */ 115d382aafbSBarry Smith 116d382aafbSBarry Smith /* 117d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 118d382aafbSBarry Smith 119d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 120d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 121d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 122d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 123d382aafbSBarry Smith mpicxx.h directly in their code 124d382aafbSBarry Smith */ 125fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 126d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 127fa9e63e2SJed Brown #endif 128fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 129d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 130fa9e63e2SJed Brown #endif 131e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 132e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 133e771154cSJed Brown #else 1342c8e378dSBarry Smith # include <mpi.h> 135e771154cSJed Brown #endif 13665013866SBarry Smith 137d382aafbSBarry Smith /* 138a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 139a7886beaSBarry Smith This usually happens because 140a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 141a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 142a7886beaSBarry Smith */ 143a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 144a7886beaSBarry Smith # if !defined(__MPIUNI_H) 145a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 146a7886beaSBarry Smith # endif 14741f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 14841f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 14941f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 15041f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 15141f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 15241f4af4cSSatish Balay # endif 15341f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 15441f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 15541f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 15641f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 15741f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 15841f4af4cSSatish Balay # endif 159a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 16041f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 161a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 162ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 163a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 164a7886beaSBarry Smith # endif 165a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 166a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 167a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 168ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 169c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 170a7886beaSBarry Smith # endif 17141f4af4cSSatish Balay #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) 17241f4af4cSSatish Balay # error "PETSc was configured with undetermined MPI - but now appears to be compiling using either of OpenMPI or a MPICH variant" 173a7886beaSBarry Smith #endif 174a7886beaSBarry Smith 175a7886beaSBarry Smith /* 1762981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 177d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 178d382aafbSBarry Smith */ 179d382aafbSBarry Smith #include <stdio.h> 180d382aafbSBarry Smith 181d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 182d382aafbSBarry Smith #if !defined(MPIAPI) 183d382aafbSBarry Smith #define MPIAPI 184d382aafbSBarry Smith #endif 185d382aafbSBarry Smith 1861cc8b206SBarry Smith /* 1871cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 1881cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 1891cc8b206SBarry Smith does not match the actual type of the argument being passed in 1901cc8b206SBarry Smith */ 191c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 192894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 193894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 1948ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 1958ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 196894dd566SJed Brown # endif 197894dd566SJed Brown #endif 198894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 199894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2008ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2018ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 202894dd566SJed Brown #endif 203b3506946SBarry Smith 2045a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 205df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 206e28ce29aSPatrick Sanan 207e28ce29aSPatrick Sanan /*MC 208e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 209e28ce29aSPatrick Sanan 210e28ce29aSPatrick Sanan Notes: 211e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 212e28ce29aSPatrick Sanan 213e28ce29aSPatrick Sanan Level: beginner 214e28ce29aSPatrick Sanan 215e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 216e28ce29aSPatrick Sanan M*/ 217e28ce29aSPatrick Sanan 21837354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 219bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 220a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 221fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 222bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 223a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 224f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 225bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 226a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 227236ed0a3SSatish Balay #else 228bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 229236ed0a3SSatish Balay #endif 230b7b8f77aSBarry Smith 2317cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 232b7b8f77aSBarry Smith 233d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 234bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 235a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 236d382aafbSBarry Smith #else 237d382aafbSBarry Smith # define MPIU_INT MPI_INT 238a05e1a72SSatish Balay # define PetscInt_FMT "d" 239d382aafbSBarry Smith #endif 240d382aafbSBarry Smith 241503cfb0cSBarry Smith /* 242503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 243503cfb0cSBarry Smith */ 244e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 245d382aafbSBarry Smith 246d382aafbSBarry Smith /* 247d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 248d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 249d382aafbSBarry Smith */ 250014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 251d382aafbSBarry Smith 252d382aafbSBarry Smith /* 253d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 254d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 255d382aafbSBarry Smith */ 256014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 257d382aafbSBarry Smith 258d382aafbSBarry Smith /*MC 259d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 260d382aafbSBarry Smith 261d382aafbSBarry Smith Synopsis: 262aaa7dc30SBarry Smith #include <petscsys.h> 263ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 264d382aafbSBarry Smith 265eca87e8dSBarry Smith Not Collective 266eca87e8dSBarry Smith 267d382aafbSBarry Smith Input Parameters: 268d382aafbSBarry Smith . cond - condition or expression 269d382aafbSBarry Smith 270e28ce29aSPatrick Sanan Notes: 271e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 272d382aafbSBarry Smith branch is unlikely. 273d382aafbSBarry Smith 274d382aafbSBarry Smith Level: advanced 275d382aafbSBarry Smith 276d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ 277d382aafbSBarry Smith M*/ 278d382aafbSBarry Smith 279d382aafbSBarry Smith /*MC 280d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 281d382aafbSBarry Smith 282d382aafbSBarry Smith Synopsis: 283aaa7dc30SBarry Smith #include <petscsys.h> 28423072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 285d382aafbSBarry Smith 286eca87e8dSBarry Smith Not Collective 287eca87e8dSBarry Smith 288d382aafbSBarry Smith Input Parameters: 289d382aafbSBarry Smith . cond - condition or expression 290d382aafbSBarry Smith 291e28ce29aSPatrick Sanan Notes: 292e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 293d382aafbSBarry Smith branch is likely. 294d382aafbSBarry Smith 295d382aafbSBarry Smith Level: advanced 296d382aafbSBarry Smith 297d382aafbSBarry Smith .seealso: PetscUnlikely() 298d382aafbSBarry Smith M*/ 299d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 300d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 301d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 302d382aafbSBarry Smith #else 303cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 304cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 305d382aafbSBarry Smith #endif 306d382aafbSBarry Smith 307d382aafbSBarry Smith /* 308d382aafbSBarry Smith Declare extern C stuff after including external header files 309d382aafbSBarry Smith */ 310d382aafbSBarry Smith 3116a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 31270b3c8c7SBarry Smith 3138b49ba18SBarry Smith /* 314390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 3158b49ba18SBarry Smith */ 3168b49ba18SBarry Smith #include <petscmath.h> 3178b49ba18SBarry Smith 3186a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 319d382aafbSBarry Smith 320d382aafbSBarry Smith /*MC 3210298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 322d382aafbSBarry Smith 323d382aafbSBarry Smith Level: beginner 324d382aafbSBarry Smith 325e28ce29aSPatrick Sanan Note: 326e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 327d382aafbSBarry Smith some default 328d382aafbSBarry Smith 329e28ce29aSPatrick Sanan Fortran Notes: 330e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 331d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 332d382aafbSBarry Smith 333e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 334d382aafbSBarry Smith 335d382aafbSBarry Smith M*/ 3360298fd71SBarry Smith #define PETSC_IGNORE NULL 337d382aafbSBarry Smith 338c528d872SBarry Smith /* This is deprecated */ 339c528d872SBarry Smith #define PETSC_NULL NULL 340c528d872SBarry Smith 341d382aafbSBarry Smith /*MC 342557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 343557d4da8SBarry Smith where you wish PETSc to use the default. 344557d4da8SBarry Smith 345557d4da8SBarry Smith Level: beginner 346557d4da8SBarry Smith 347e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 348557d4da8SBarry Smith 349557d4da8SBarry Smith M*/ 350557d4da8SBarry Smith #define PETSC_DECIDE -1 351557d4da8SBarry Smith 352557d4da8SBarry Smith /*MC 353d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 354d382aafbSBarry Smith where you wish PETSc to compute the required value. 355d382aafbSBarry Smith 356d382aafbSBarry Smith Level: beginner 357d382aafbSBarry Smith 358e28ce29aSPatrick Sanan Developer Note: 359e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 360557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 361557d4da8SBarry Smith 3620298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 363d382aafbSBarry Smith 364d382aafbSBarry Smith M*/ 365d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 366d382aafbSBarry Smith 367d382aafbSBarry Smith /*MC 368557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 369557d4da8SBarry Smith where you wish PETSc to use the default. 370557d4da8SBarry Smith 371557d4da8SBarry Smith Level: beginner 372557d4da8SBarry Smith 373e28ce29aSPatrick Sanan Fortran Notes: 374e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 375557d4da8SBarry Smith 3760298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 377557d4da8SBarry Smith 378557d4da8SBarry Smith M*/ 379557d4da8SBarry Smith #define PETSC_DEFAULT -2 380557d4da8SBarry Smith 381557d4da8SBarry Smith /*MC 382d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 383ea8fe74dSBarry Smith all the processes that PETSc knows about. 384d382aafbSBarry Smith 385d382aafbSBarry Smith Level: beginner 386d382aafbSBarry Smith 387e28ce29aSPatrick Sanan Notes: 388e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 389d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 390d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 391a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 392a990b902SBarry Smith 393a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 394a990b902SBarry Smith is called because it may not have a valid value yet. 395d382aafbSBarry Smith 396d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 397d382aafbSBarry Smith 398d382aafbSBarry Smith M*/ 399014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 400d382aafbSBarry Smith 401d382aafbSBarry Smith /*MC 402503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 403d382aafbSBarry Smith 404d382aafbSBarry Smith Level: beginner 405d382aafbSBarry Smith 406e28ce29aSPatrick Sanan Notes: 407e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 408a990b902SBarry Smith 409d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 410d382aafbSBarry Smith 411d382aafbSBarry Smith M*/ 412d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 413d382aafbSBarry Smith 414d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 415014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 416014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 4174cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 41882f73ecaSAlejandro Lamas Daviña PETSC_EXTERN PetscBool PetscCUDASynchronize; 419d382aafbSBarry Smith 420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 423d382aafbSBarry Smith 4247381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 4257381773fSBarry Smith PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm); 4267381773fSBarry Smith #endif 4277381773fSBarry Smith 428d382aafbSBarry Smith /*MC 42995dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 430d382aafbSBarry Smith 431eca87e8dSBarry Smith Synopsis: 432aaa7dc30SBarry Smith #include <petscsys.h> 433eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 434eca87e8dSBarry Smith 435eca87e8dSBarry Smith Not Collective 436eca87e8dSBarry Smith 437d382aafbSBarry Smith Input Parameter: 438d382aafbSBarry Smith . m - number of bytes to allocate 439d382aafbSBarry Smith 440d382aafbSBarry Smith Output Parameter: 441d382aafbSBarry Smith . result - memory allocated 442d382aafbSBarry Smith 443d382aafbSBarry Smith Level: beginner 444d382aafbSBarry Smith 44549d7da52SJed Brown Notes: 44649d7da52SJed Brown Memory is always allocated at least double aligned 447d382aafbSBarry Smith 44849d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 449d382aafbSBarry Smith 450d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 451d382aafbSBarry Smith 452d382aafbSBarry Smith M*/ 453071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 454d382aafbSBarry Smith 455d382aafbSBarry Smith /*MC 4563221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 4573221ece2SMatthew G. Knepley 4583221ece2SMatthew G. Knepley Synopsis: 4593221ece2SMatthew G. Knepley #include <petscsys.h> 4603221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 4613221ece2SMatthew G. Knepley 4623221ece2SMatthew G. Knepley Not Collective 4633221ece2SMatthew G. Knepley 4643221ece2SMatthew G. Knepley Input Parameters: 4653221ece2SMatthew G. Knepley + m - number of bytes to allocate 4663221ece2SMatthew G. Knepley - result - initial memory allocated 4673221ece2SMatthew G. Knepley 4683221ece2SMatthew G. Knepley Output Parameter: 4693221ece2SMatthew G. Knepley . result - new memory allocated 4703221ece2SMatthew G. Knepley 4713221ece2SMatthew G. Knepley Level: developer 4723221ece2SMatthew G. Knepley 4733221ece2SMatthew G. Knepley Notes: 4743221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 4753221ece2SMatthew G. Knepley 4763221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 4773221ece2SMatthew G. Knepley 4783221ece2SMatthew G. Knepley M*/ 4793221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 4803221ece2SMatthew G. Knepley 4813221ece2SMatthew G. Knepley /*MC 482503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 483d382aafbSBarry Smith 484d382aafbSBarry Smith Synopsis: 485aaa7dc30SBarry Smith #include <petscsys.h> 486d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 487d382aafbSBarry Smith 488eca87e8dSBarry Smith Not Collective 489eca87e8dSBarry Smith 490eca87e8dSBarry Smith Input Parameters: 491eca87e8dSBarry Smith . addr - address to align (any pointer type) 492eca87e8dSBarry Smith 493d382aafbSBarry Smith Level: developer 494d382aafbSBarry Smith 495d382aafbSBarry Smith .seealso: PetscMallocAlign() 496d382aafbSBarry Smith 497d382aafbSBarry Smith M*/ 498d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 499d382aafbSBarry Smith 500d382aafbSBarry Smith /*MC 501785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 502d382aafbSBarry Smith 503eca87e8dSBarry Smith Synopsis: 504aaa7dc30SBarry Smith #include <petscsys.h> 505785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 506785e854fSJed Brown 507785e854fSJed Brown Not Collective 508785e854fSJed Brown 509785e854fSJed Brown Input Parameter: 510390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 511785e854fSJed Brown 512785e854fSJed Brown Output Parameter: 513785e854fSJed Brown . r1 - memory allocated in first chunk 514785e854fSJed Brown 515e28ce29aSPatrick Sanan Note: 516e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 517390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 518390e1bf2SBarry Smith $ PetscInt *id; 519390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 520390e1bf2SBarry Smith not 521390e1bf2SBarry Smith $ PetscInt *id; 522390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 523390e1bf2SBarry Smith 524390e1bf2SBarry Smith Does not zero the memory allocatd, used PetscCalloc1() to obtain memory that has been zeroed. 525390e1bf2SBarry Smith 526390e1bf2SBarry Smith Level: beginner 527785e854fSJed Brown 5281795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 529785e854fSJed Brown 530785e854fSJed Brown M*/ 5312553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 532785e854fSJed Brown 533785e854fSJed Brown /*MC 5341795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 5351795a4d1SJed Brown 5361795a4d1SJed Brown Synopsis: 537aaa7dc30SBarry Smith #include <petscsys.h> 5381795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 5391795a4d1SJed Brown 5401795a4d1SJed Brown Not Collective 5411795a4d1SJed Brown 5421795a4d1SJed Brown Input Parameter: 5431795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 5441795a4d1SJed Brown 5451795a4d1SJed Brown Output Parameter: 5461795a4d1SJed Brown . r1 - memory allocated in first chunk 5471795a4d1SJed Brown 548e28ce29aSPatrick Sanan Notes: 549e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 550390e1bf2SBarry Smith 551390e1bf2SBarry Smith Level: beginner 5521795a4d1SJed Brown 5531795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 5541795a4d1SJed Brown 5551795a4d1SJed Brown M*/ 5562553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 5571795a4d1SJed Brown 5581795a4d1SJed Brown /*MC 559dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 560d382aafbSBarry Smith 561eca87e8dSBarry Smith Synopsis: 562aaa7dc30SBarry Smith #include <petscsys.h> 563dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 564eca87e8dSBarry Smith 565eca87e8dSBarry Smith Not Collective 566eca87e8dSBarry Smith 567d382aafbSBarry Smith Input Parameter: 568d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 569dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 570d382aafbSBarry Smith 571d382aafbSBarry Smith Output Parameter: 572d382aafbSBarry Smith + r1 - memory allocated in first chunk 573d382aafbSBarry Smith - r2 - memory allocated in second chunk 574d382aafbSBarry Smith 575d382aafbSBarry Smith Level: developer 576d382aafbSBarry Smith 5771795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 578d382aafbSBarry Smith 579d382aafbSBarry Smith M*/ 5802553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 581d382aafbSBarry Smith 582d382aafbSBarry Smith /*MC 5831795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 584d382aafbSBarry Smith 585eca87e8dSBarry Smith Synopsis: 586aaa7dc30SBarry Smith #include <petscsys.h> 5871795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 588eca87e8dSBarry Smith 589eca87e8dSBarry Smith Not Collective 590eca87e8dSBarry Smith 591d382aafbSBarry Smith Input Parameter: 592d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 5931795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 5941795a4d1SJed Brown 5951795a4d1SJed Brown Output Parameter: 5961795a4d1SJed Brown + r1 - memory allocated in first chunk 5971795a4d1SJed Brown - r2 - memory allocated in second chunk 5981795a4d1SJed Brown 5991795a4d1SJed Brown Level: developer 6001795a4d1SJed Brown 6011795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 6021795a4d1SJed Brown 6031795a4d1SJed Brown M*/ 6042553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 6051795a4d1SJed Brown 6061795a4d1SJed Brown /*MC 607dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 608d382aafbSBarry Smith 609d382aafbSBarry Smith Synopsis: 610aaa7dc30SBarry Smith #include <petscsys.h> 611dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 612d382aafbSBarry Smith 613d382aafbSBarry Smith Not Collective 614d382aafbSBarry Smith 615d382aafbSBarry Smith Input Parameter: 616d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 617d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 618dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 619d382aafbSBarry Smith 620d382aafbSBarry Smith Output Parameter: 621d382aafbSBarry Smith + r1 - memory allocated in first chunk 622d382aafbSBarry Smith . r2 - memory allocated in second chunk 623d382aafbSBarry Smith - r3 - memory allocated in third chunk 624d382aafbSBarry Smith 625d382aafbSBarry Smith Level: developer 626d382aafbSBarry Smith 6271795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 628d382aafbSBarry Smith 629d382aafbSBarry Smith M*/ 6302553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 631d382aafbSBarry Smith 632d382aafbSBarry Smith /*MC 6331795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 634d382aafbSBarry Smith 635eca87e8dSBarry Smith Synopsis: 636aaa7dc30SBarry Smith #include <petscsys.h> 6371795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 638eca87e8dSBarry Smith 639eca87e8dSBarry Smith Not Collective 640eca87e8dSBarry Smith 641d382aafbSBarry Smith Input Parameter: 642d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 643d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 6441795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 6451795a4d1SJed Brown 6461795a4d1SJed Brown Output Parameter: 6471795a4d1SJed Brown + r1 - memory allocated in first chunk 6481795a4d1SJed Brown . r2 - memory allocated in second chunk 6491795a4d1SJed Brown - r3 - memory allocated in third chunk 6501795a4d1SJed Brown 6511795a4d1SJed Brown Level: developer 6521795a4d1SJed Brown 6531795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 6541795a4d1SJed Brown 6551795a4d1SJed Brown M*/ 6562553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 6571795a4d1SJed Brown 6581795a4d1SJed Brown /*MC 659dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 660d382aafbSBarry Smith 661d382aafbSBarry Smith Synopsis: 662aaa7dc30SBarry Smith #include <petscsys.h> 663dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 664d382aafbSBarry Smith 665d382aafbSBarry Smith Not Collective 666d382aafbSBarry Smith 667d382aafbSBarry Smith Input Parameter: 668d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 669d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 670d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 671dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 672d382aafbSBarry Smith 673d382aafbSBarry Smith Output Parameter: 674d382aafbSBarry Smith + r1 - memory allocated in first chunk 675d382aafbSBarry Smith . r2 - memory allocated in second chunk 676d382aafbSBarry Smith . r3 - memory allocated in third chunk 677d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 678d382aafbSBarry Smith 679d382aafbSBarry Smith Level: developer 680d382aafbSBarry Smith 6811795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 682d382aafbSBarry Smith 683d382aafbSBarry Smith M*/ 6842553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 685d382aafbSBarry Smith 686d382aafbSBarry Smith /*MC 6871795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 688d382aafbSBarry Smith 689eca87e8dSBarry Smith Synopsis: 690aaa7dc30SBarry Smith #include <petscsys.h> 6911795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 692eca87e8dSBarry Smith 693eca87e8dSBarry Smith Not Collective 694eca87e8dSBarry Smith 695e28ce29aSPatrick Sanan Input Parameters: 696d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 697d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 698d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 6991795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 7001795a4d1SJed Brown 701e28ce29aSPatrick Sanan Output Parameters: 7021795a4d1SJed Brown + r1 - memory allocated in first chunk 7031795a4d1SJed Brown . r2 - memory allocated in second chunk 7041795a4d1SJed Brown . r3 - memory allocated in third chunk 7051795a4d1SJed Brown - r4 - memory allocated in fourth chunk 7061795a4d1SJed Brown 7071795a4d1SJed Brown Level: developer 7081795a4d1SJed Brown 7091795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 7101795a4d1SJed Brown 7111795a4d1SJed Brown M*/ 7122553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 7131795a4d1SJed Brown 7141795a4d1SJed Brown /*MC 715dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 716d382aafbSBarry Smith 717d382aafbSBarry Smith Synopsis: 718aaa7dc30SBarry Smith #include <petscsys.h> 719dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 720d382aafbSBarry Smith 721d382aafbSBarry Smith Not Collective 722d382aafbSBarry Smith 723e28ce29aSPatrick Sanan Input Parameters: 724d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 725d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 726d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 727d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 728dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 729d382aafbSBarry Smith 730e28ce29aSPatrick Sanan Output Parameters: 731d382aafbSBarry Smith + r1 - memory allocated in first chunk 732d382aafbSBarry Smith . r2 - memory allocated in second chunk 733d382aafbSBarry Smith . r3 - memory allocated in third chunk 734d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 735d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 736d382aafbSBarry Smith 737d382aafbSBarry Smith Level: developer 738d382aafbSBarry Smith 7391795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 740d382aafbSBarry Smith 741d382aafbSBarry Smith M*/ 7422553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 743d382aafbSBarry Smith 744d382aafbSBarry Smith /*MC 7451795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 746d382aafbSBarry Smith 747eca87e8dSBarry Smith Synopsis: 748aaa7dc30SBarry Smith #include <petscsys.h> 7491795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 750eca87e8dSBarry Smith 751eca87e8dSBarry Smith Not Collective 752eca87e8dSBarry Smith 753e28ce29aSPatrick Sanan Input Parameters: 754d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 755d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 756d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 757d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 7581795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 7591795a4d1SJed Brown 760e28ce29aSPatrick Sanan Output Parameters: 7611795a4d1SJed Brown + r1 - memory allocated in first chunk 7621795a4d1SJed Brown . r2 - memory allocated in second chunk 7631795a4d1SJed Brown . r3 - memory allocated in third chunk 7641795a4d1SJed Brown . r4 - memory allocated in fourth chunk 7651795a4d1SJed Brown - r5 - memory allocated in fifth chunk 7661795a4d1SJed Brown 7671795a4d1SJed Brown Level: developer 7681795a4d1SJed Brown 7691795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 7701795a4d1SJed Brown 7711795a4d1SJed Brown M*/ 7722553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 773d382aafbSBarry Smith 774d382aafbSBarry Smith /*MC 775dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 776d382aafbSBarry Smith 777d382aafbSBarry Smith Synopsis: 778aaa7dc30SBarry Smith #include <petscsys.h> 779dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 780d382aafbSBarry Smith 781d382aafbSBarry Smith Not Collective 782d382aafbSBarry Smith 783e28ce29aSPatrick Sanan Input Parameters: 784d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 785d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 786d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 787d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 788d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 789dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 790d382aafbSBarry Smith 791e28ce29aSPatrick Sanan Output Parameteasr: 792d382aafbSBarry Smith + r1 - memory allocated in first chunk 793d382aafbSBarry Smith . r2 - memory allocated in second chunk 794d382aafbSBarry Smith . r3 - memory allocated in third chunk 795d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 796d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 797d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 798d382aafbSBarry Smith 799d382aafbSBarry Smith Level: developer 800d382aafbSBarry Smith 8011795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 802d382aafbSBarry Smith 803d382aafbSBarry Smith M*/ 8042553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 805d382aafbSBarry Smith 806d382aafbSBarry Smith /*MC 8071795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 808d382aafbSBarry Smith 809eca87e8dSBarry Smith Synopsis: 810aaa7dc30SBarry Smith #include <petscsys.h> 8111795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 812eca87e8dSBarry Smith 813eca87e8dSBarry Smith Not Collective 814eca87e8dSBarry Smith 815e28ce29aSPatrick Sanan Input Parameters: 816d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 817d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 818d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 819d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 820d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 8211795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 8221795a4d1SJed Brown 823e28ce29aSPatrick Sanan Output Parameters: 8241795a4d1SJed Brown + r1 - memory allocated in first chunk 8251795a4d1SJed Brown . r2 - memory allocated in second chunk 8261795a4d1SJed Brown . r3 - memory allocated in third chunk 8271795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8281795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8291795a4d1SJed Brown - r6 - memory allocated in sixth chunk 8301795a4d1SJed Brown 8311795a4d1SJed Brown Level: developer 8321795a4d1SJed Brown 8331795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 8341795a4d1SJed Brown 8351795a4d1SJed Brown M*/ 8362553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 8371795a4d1SJed Brown 8381795a4d1SJed Brown /*MC 839dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 840d382aafbSBarry Smith 841d382aafbSBarry Smith Synopsis: 842aaa7dc30SBarry Smith #include <petscsys.h> 843dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 844d382aafbSBarry Smith 845d382aafbSBarry Smith Not Collective 846d382aafbSBarry Smith 847e28ce29aSPatrick Sanan Input Parameters: 848d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 849d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 850d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 851d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 852d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 853d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 854dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 855d382aafbSBarry Smith 856e28ce29aSPatrick Sanan Output Parameters: 857d382aafbSBarry Smith + r1 - memory allocated in first chunk 858d382aafbSBarry Smith . r2 - memory allocated in second chunk 859d382aafbSBarry Smith . r3 - memory allocated in third chunk 860d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 861d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 862d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 863eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 864d382aafbSBarry Smith 865d382aafbSBarry Smith Level: developer 866d382aafbSBarry Smith 8671795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 868d382aafbSBarry Smith 869d382aafbSBarry Smith M*/ 8702553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 871d382aafbSBarry Smith 872d382aafbSBarry Smith /*MC 8731795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 8741795a4d1SJed Brown 8751795a4d1SJed Brown Synopsis: 876aaa7dc30SBarry Smith #include <petscsys.h> 8771795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 8781795a4d1SJed Brown 8791795a4d1SJed Brown Not Collective 8801795a4d1SJed Brown 881e28ce29aSPatrick Sanan Input Parameters: 8821795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 8831795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 8841795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 8851795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 8861795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 8871795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 8881795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 8891795a4d1SJed Brown 890e28ce29aSPatrick Sanan Output Parameters: 8911795a4d1SJed Brown + r1 - memory allocated in first chunk 8921795a4d1SJed Brown . r2 - memory allocated in second chunk 8931795a4d1SJed Brown . r3 - memory allocated in third chunk 8941795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8951795a4d1SJed Brown . r5 - memory allocated in fifth chunk 8961795a4d1SJed Brown . r6 - memory allocated in sixth chunk 8971795a4d1SJed Brown - r7 - memory allocated in seventh chunk 8981795a4d1SJed Brown 8991795a4d1SJed Brown Level: developer 9001795a4d1SJed Brown 9011795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 9021795a4d1SJed Brown 9031795a4d1SJed Brown M*/ 9042553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 9051795a4d1SJed Brown 9061795a4d1SJed Brown /*MC 907503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 908d382aafbSBarry Smith 909eca87e8dSBarry Smith Synopsis: 910aaa7dc30SBarry Smith #include <petscsys.h> 911b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 912eca87e8dSBarry Smith 913eca87e8dSBarry Smith Not Collective 914eca87e8dSBarry Smith 915d382aafbSBarry Smith Output Parameter: 916b00a9115SJed Brown . result - memory allocated, sized to match pointer type 917d382aafbSBarry Smith 918d382aafbSBarry Smith Level: beginner 919d382aafbSBarry Smith 920390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 921d382aafbSBarry Smith 922d382aafbSBarry Smith M*/ 923b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 924ad0619ddSBarry Smith 925ad0619ddSBarry Smith /*MC 926b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 927ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 928ad0619ddSBarry Smith 929ad0619ddSBarry Smith Synopsis: 930aaa7dc30SBarry Smith #include <petscsys.h> 931b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 932ad0619ddSBarry Smith 933ad0619ddSBarry Smith Not Collective 934ad0619ddSBarry Smith 935ad0619ddSBarry Smith Input Parameter: 936b00a9115SJed Brown . obj - object memory is logged to 937ad0619ddSBarry Smith 938ad0619ddSBarry Smith Output Parameter: 939b00a9115SJed Brown . result - memory allocated, sized to match pointer type 940ad0619ddSBarry Smith 941ad0619ddSBarry Smith Level: developer 942ad0619ddSBarry Smith 943390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 944ad0619ddSBarry Smith 945ad0619ddSBarry Smith M*/ 946d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 947d382aafbSBarry Smith 948d382aafbSBarry Smith /*MC 949d382aafbSBarry Smith PetscFree - Frees memory 950d382aafbSBarry Smith 951eca87e8dSBarry Smith Synopsis: 952aaa7dc30SBarry Smith #include <petscsys.h> 953eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 954eca87e8dSBarry Smith 955eca87e8dSBarry Smith Not Collective 956eca87e8dSBarry Smith 957d382aafbSBarry Smith Input Parameter: 958390e1bf2SBarry Smith . memory - memory to free (the pointer is ALWAYS set to NULL upon sucess) 959d382aafbSBarry Smith 960d382aafbSBarry Smith Level: beginner 961d382aafbSBarry Smith 96249d7da52SJed Brown Notes: 963390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 964390e1bf2SBarry Smith 96549d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 966d382aafbSBarry Smith 967390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 968d382aafbSBarry Smith 969d382aafbSBarry Smith M*/ 97049d7da52SJed Brown #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = 0,0)) 971d382aafbSBarry Smith 972d382aafbSBarry Smith /*MC 973d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 974d382aafbSBarry Smith 975eca87e8dSBarry Smith Synopsis: 976aaa7dc30SBarry Smith #include <petscsys.h> 977eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 978eca87e8dSBarry Smith 979eca87e8dSBarry Smith Not Collective 980eca87e8dSBarry Smith 981e28ce29aSPatrick Sanan Input Parameters: 982d382aafbSBarry Smith + memory1 - memory to free 983d382aafbSBarry Smith - memory2 - 2nd memory to free 984d382aafbSBarry Smith 985d382aafbSBarry Smith Level: developer 986d382aafbSBarry Smith 98795452b02SPatrick Sanan Notes: 98895452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 989d382aafbSBarry Smith 990d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 991d382aafbSBarry Smith 992d382aafbSBarry Smith M*/ 993ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 994d382aafbSBarry Smith 995d382aafbSBarry Smith /*MC 996d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 997d382aafbSBarry Smith 998eca87e8dSBarry Smith Synopsis: 999aaa7dc30SBarry Smith #include <petscsys.h> 1000eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1001eca87e8dSBarry Smith 1002eca87e8dSBarry Smith Not Collective 1003eca87e8dSBarry Smith 1004e28ce29aSPatrick Sanan Input Parameters: 1005d382aafbSBarry Smith + memory1 - memory to free 1006d382aafbSBarry Smith . memory2 - 2nd memory to free 1007d382aafbSBarry Smith - memory3 - 3rd memory to free 1008d382aafbSBarry Smith 1009d382aafbSBarry Smith Level: developer 1010d382aafbSBarry Smith 101195452b02SPatrick Sanan Notes: 101295452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1013d382aafbSBarry Smith 1014d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1015d382aafbSBarry Smith 1016d382aafbSBarry Smith M*/ 1017ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1018d382aafbSBarry Smith 1019d382aafbSBarry Smith /*MC 1020d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1021d382aafbSBarry Smith 1022eca87e8dSBarry Smith Synopsis: 1023aaa7dc30SBarry Smith #include <petscsys.h> 1024eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1025eca87e8dSBarry Smith 1026eca87e8dSBarry Smith Not Collective 1027eca87e8dSBarry Smith 1028e28ce29aSPatrick Sanan Input Parameters: 1029d382aafbSBarry Smith + m1 - memory to free 1030d382aafbSBarry Smith . m2 - 2nd memory to free 1031d382aafbSBarry Smith . m3 - 3rd memory to free 1032d382aafbSBarry Smith - m4 - 4th memory to free 1033d382aafbSBarry Smith 1034d382aafbSBarry Smith Level: developer 1035d382aafbSBarry Smith 103695452b02SPatrick Sanan Notes: 103795452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1038d382aafbSBarry Smith 1039d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1040d382aafbSBarry Smith 1041d382aafbSBarry Smith M*/ 1042ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1043d382aafbSBarry Smith 1044d382aafbSBarry Smith /*MC 1045d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1046d382aafbSBarry Smith 1047eca87e8dSBarry Smith Synopsis: 1048aaa7dc30SBarry Smith #include <petscsys.h> 1049eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1050eca87e8dSBarry Smith 1051eca87e8dSBarry Smith Not Collective 1052eca87e8dSBarry Smith 1053e28ce29aSPatrick Sanan Input Parameters: 1054d382aafbSBarry Smith + m1 - memory to free 1055d382aafbSBarry Smith . m2 - 2nd memory to free 1056d382aafbSBarry Smith . m3 - 3rd memory to free 1057d382aafbSBarry Smith . m4 - 4th memory to free 1058d382aafbSBarry Smith - m5 - 5th memory to free 1059d382aafbSBarry Smith 1060d382aafbSBarry Smith Level: developer 1061d382aafbSBarry Smith 106295452b02SPatrick Sanan Notes: 106395452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1064d382aafbSBarry Smith 1065d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1066d382aafbSBarry Smith 1067d382aafbSBarry Smith M*/ 1068ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1069d382aafbSBarry Smith 1070d382aafbSBarry Smith /*MC 1071d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1072d382aafbSBarry Smith 1073eca87e8dSBarry Smith Synopsis: 1074aaa7dc30SBarry Smith #include <petscsys.h> 1075eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1076eca87e8dSBarry Smith 1077eca87e8dSBarry Smith Not Collective 1078eca87e8dSBarry Smith 1079e28ce29aSPatrick Sanan Input Parameters: 1080d382aafbSBarry Smith + m1 - memory to free 1081d382aafbSBarry Smith . m2 - 2nd memory to free 1082d382aafbSBarry Smith . m3 - 3rd memory to free 1083d382aafbSBarry Smith . m4 - 4th memory to free 1084d382aafbSBarry Smith . m5 - 5th memory to free 1085d382aafbSBarry Smith - m6 - 6th memory to free 1086d382aafbSBarry Smith 1087d382aafbSBarry Smith 1088d382aafbSBarry Smith Level: developer 1089d382aafbSBarry Smith 109095452b02SPatrick Sanan Notes: 109195452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1092d382aafbSBarry Smith 1093d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1094d382aafbSBarry Smith 1095d382aafbSBarry Smith M*/ 1096ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1097d382aafbSBarry Smith 1098d382aafbSBarry Smith /*MC 1099d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1100d382aafbSBarry Smith 1101eca87e8dSBarry Smith Synopsis: 1102aaa7dc30SBarry Smith #include <petscsys.h> 1103eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1104eca87e8dSBarry Smith 1105eca87e8dSBarry Smith Not Collective 1106eca87e8dSBarry Smith 1107e28ce29aSPatrick Sanan Input Parameters: 1108d382aafbSBarry Smith + m1 - memory to free 1109d382aafbSBarry Smith . m2 - 2nd memory to free 1110d382aafbSBarry Smith . m3 - 3rd memory to free 1111d382aafbSBarry Smith . m4 - 4th memory to free 1112d382aafbSBarry Smith . m5 - 5th memory to free 1113d382aafbSBarry Smith . m6 - 6th memory to free 1114d382aafbSBarry Smith - m7 - 7th memory to free 1115d382aafbSBarry Smith 1116d382aafbSBarry Smith 1117d382aafbSBarry Smith Level: developer 1118d382aafbSBarry Smith 111995452b02SPatrick Sanan Notes: 112095452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1121d382aafbSBarry Smith 1122d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1123d382aafbSBarry Smith PetscMalloc7() 1124d382aafbSBarry Smith 1125d382aafbSBarry Smith M*/ 1126ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1127d382aafbSBarry Smith 1128ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1129ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1130071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1131efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 11323221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1133ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 1134071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[])); 1135014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1136d382aafbSBarry Smith 1137d382aafbSBarry Smith /* 1138c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1139c1706be6SHong Zhang */ 1140c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1141c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 1142c1706be6SHong Zhang 1143a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 114436763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1145a5057860SBarry Smith 1146a5057860SBarry Smith /* 114766d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1148d382aafbSBarry Smith */ 1149014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 1150014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *); 1151014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1152014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1153e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1154e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 1155014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool); 11560acecf5bSBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*); 1157efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 1158014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void); 1159574034a9SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble); 1160014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*); 1161d382aafbSBarry Smith 11626a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1163014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1164014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1165014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 11668e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1167d382aafbSBarry Smith 1168d382aafbSBarry Smith /* 1169d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1170d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1171d382aafbSBarry Smith functionality and/or error checking. 1172d382aafbSBarry Smith */ 1173014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1174014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1175014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1176d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1177014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1178014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1179014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1180014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1181014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1182014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1183014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1184a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1185014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1186014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1187014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 11882f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1189014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1190014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1191014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1192014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 11932c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1194014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1195014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 119647340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 11976fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 11986991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 11996991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1200014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1201d382aafbSBarry Smith 1202573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1203573b0fb4SBarry Smith 1204014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1205014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1206014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 12078e81d068SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1208d382aafbSBarry Smith 1209a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1210a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1211a53986e1SJed Brown 1212d382aafbSBarry Smith /* 1213d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1214d382aafbSBarry Smith */ 1215367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1216570b7f6dSBarry Smith #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1217014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 12182414b3c7SJed Brown #else 12192414b3c7SJed Brown #define MPIU_SUM MPI_SUM 12202414b3c7SJed Brown #endif 1221570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1222014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1223014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1224d9822059SBarry Smith #else 1225d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1226d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1227d9822059SBarry Smith #endif 1228014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1229d382aafbSBarry Smith 1230014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1231014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1232eb3f98d2SBarry Smith 123395c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1234d6a4318aSJed Brown 1235639ff905SBarry Smith /* 1236639ff905SBarry Smith Defines PETSc error handling. 1237639ff905SBarry Smith */ 1238639ff905SBarry Smith #include <petscerror.h> 1239d382aafbSBarry Smith 12400700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1241014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1242014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1243014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 1244d382aafbSBarry Smith 1245d382aafbSBarry Smith /* 1246d382aafbSBarry Smith Routines that get memory usage information from the OS 1247d382aafbSBarry Smith */ 1248014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1249014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1250014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1251b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1252d382aafbSBarry Smith 1253014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []); 1254014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1255d382aafbSBarry Smith 1256d382aafbSBarry Smith /* 1257d382aafbSBarry Smith Initialization of PETSc 1258d382aafbSBarry Smith */ 1259014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1260014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1261014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1263014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1264014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1265014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1267014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1268014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1269d382aafbSBarry Smith 1270014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1271607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1272d382aafbSBarry Smith 1273014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1274014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1275014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1276014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1277d382aafbSBarry Smith 1278d382aafbSBarry Smith /* 1279d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 12802981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1281d382aafbSBarry Smith */ 1282638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1283638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1284638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1285d382aafbSBarry Smith 1286d382aafbSBarry Smith /* 1287d382aafbSBarry Smith Functions that can act on any PETSc object. 1288d382aafbSBarry Smith */ 1289014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1291014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1293014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1295014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1296014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1299014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 1304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *); 1307bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1308bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 13110eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 13120eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 1314d382aafbSBarry Smith 1315665c2dedSJed Brown #include <petscviewertypes.h> 1316639ff905SBarry Smith #include <petscoptions.h> 1317639ff905SBarry Smith 13180633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 13190633abcbSJed Brown 1320639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1321c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1322dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1323639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 13240005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 13250005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1327014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1329014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1330014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1331014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1332014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1333685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1334014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1335014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 13364099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1337014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1340d382aafbSBarry Smith 1341e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 13427aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1343e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1344e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1345e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1346e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1347e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1348e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1349e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1350e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1351e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 135215681b3cSBarry Smith 1353ec7429eaSBarry Smith #else 13547aab2a10SBarry Smith #define PetscSAWsBlock() 0 1355e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1356e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1357e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1358e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1359e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1360e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1361e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1362e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1363e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 136415681b3cSBarry Smith 1365ec7429eaSBarry Smith #endif 1366b90c6cbeSBarry Smith 136782b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 136882b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 136982b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 13707d5d4d99SBarry Smith 13715fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1372a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 13735fe58b6fSBarry Smith #endif 13747eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1375a64a8e02SBarry Smith 1376140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1377140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1378140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1379140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1380140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1381140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1382d382aafbSBarry Smith 1383d382aafbSBarry Smith /* 1384503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1385d382aafbSBarry Smith link libraries that will be loaded as needed. 1386d382aafbSBarry Smith */ 1387a240a19fSJed Brown 1388a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1389a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1390140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 13911c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 13921c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 139344ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1394140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1395140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1396140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1397d382aafbSBarry Smith 1398014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1403014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1404014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1405014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1406d382aafbSBarry Smith 1407d382aafbSBarry Smith /* 1408d382aafbSBarry Smith Useful utility routines 1409d382aafbSBarry Smith */ 1410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1411014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1412014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1414014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1415014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 14166ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[],PetscInt[]); 14176ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[],PetscReal[]); 1418d382aafbSBarry Smith 141964ac3b0dSPatrick Sanan /*MC 1420ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1421503cfb0cSBarry Smith 1422e28ce29aSPatrick Sanan Notes: 1423e28ce29aSPatrick Sanan This is useful in cases like 1424503cfb0cSBarry Smith $ int *a; 1425ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 14261cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 142764ac3b0dSPatrick Sanan 142864ac3b0dSPatrick Sanan Level: beginner 142964ac3b0dSPatrick Sanan 143064ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 143164ac3b0dSPatrick Sanan M*/ 1432d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1433503cfb0cSBarry Smith 1434d382aafbSBarry Smith /*MC 1435d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1436d382aafbSBarry Smith 1437d382aafbSBarry Smith Synopsis: 1438aaa7dc30SBarry Smith #include <petscsys.h> 1439d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1440d382aafbSBarry Smith 1441eca87e8dSBarry Smith Not Collective 1442eca87e8dSBarry Smith 1443d382aafbSBarry Smith Input Parameters: 1444d382aafbSBarry Smith . format - the usual printf() format string 1445d382aafbSBarry Smith 1446d382aafbSBarry Smith Level: developer 1447d382aafbSBarry Smith 1448d382aafbSBarry Smith Fortran Note: 1449d382aafbSBarry Smith This routine is not supported in Fortran. 1450d382aafbSBarry Smith 1451d382aafbSBarry Smith 1452d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1453d382aafbSBarry Smith M*/ 1454014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1455d382aafbSBarry Smith 1456fcfd50ebSBarry Smith /* 1457fcfd50ebSBarry Smith Defines PETSc profiling. 1458fcfd50ebSBarry Smith */ 14592c8e378dSBarry Smith #include <petsclog.h> 1460fcfd50ebSBarry Smith 1461fcfd50ebSBarry Smith /* 1462fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1463fcfd50ebSBarry Smith */ 1464014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1465014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1466014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1467014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1468014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1469014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1470014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 14711b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1472fcfd50ebSBarry Smith 1473014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1474014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1476d382aafbSBarry Smith 1477d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1478d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1479d781fa04SBarry Smith 1480d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1481014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1482016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 148374ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1484d382aafbSBarry Smith #endif 1485d382aafbSBarry Smith 1486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 14880ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1489014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1493d382aafbSBarry Smith 1494014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **); 1496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *); 1497014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1498014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *); 1499014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1500b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1501d382aafbSBarry Smith 1502d382aafbSBarry Smith /* 1503d382aafbSBarry Smith For use in debuggers 1504d382aafbSBarry Smith */ 1505014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1506014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1510d382aafbSBarry Smith 1511a663daf8SBarry Smith #include <stddef.h> 1512a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1513d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H) 1514d382aafbSBarry Smith #include <stdlib.h> 1515d382aafbSBarry Smith #endif 15166c7e564aSBarry Smith 15174a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1518d382aafbSBarry Smith #include <xmmintrin.h> 1519d382aafbSBarry Smith #endif 1520d382aafbSBarry Smith 1521d382aafbSBarry Smith /*@C 1522580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1523580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1524580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1525580bdb30SBarry Smith 1526580bdb30SBarry Smith Not Collective 1527580bdb30SBarry Smith 1528580bdb30SBarry Smith Input Parameters: 1529580bdb30SBarry Smith + b - pointer to initial memory space 1530580bdb30SBarry Smith . a - pointer to copy space 1531580bdb30SBarry Smith - n - length (in bytes) of space to copy 1532580bdb30SBarry Smith 1533580bdb30SBarry Smith Level: intermediate 1534580bdb30SBarry Smith 1535580bdb30SBarry Smith Note: 1536857a15f1SBarry Smith PetscArraymove() is preferred 1537580bdb30SBarry Smith This routine is analogous to memmove(). 1538580bdb30SBarry Smith 1539580bdb30SBarry Smith Developers Note: This is inlined for performance 1540580bdb30SBarry Smith 1541580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1542580bdb30SBarry Smith PetscArraymove() 1543580bdb30SBarry Smith @*/ 1544580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1545580bdb30SBarry Smith { 1546580bdb30SBarry Smith PetscFunctionBegin; 1547580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1548580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1549580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1550580bdb30SBarry Smith if (a < b) { 1551580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1552580bdb30SBarry Smith else { 1553580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1554580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1555580bdb30SBarry Smith } 1556580bdb30SBarry Smith } else { 1557580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1558580bdb30SBarry Smith else { 1559580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1560580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1561580bdb30SBarry Smith } 1562580bdb30SBarry Smith } 1563580bdb30SBarry Smith #else 1564580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1565580bdb30SBarry Smith #endif 1566580bdb30SBarry Smith PetscFunctionReturn(0); 1567580bdb30SBarry Smith } 1568580bdb30SBarry Smith 1569d382aafbSBarry Smith /*@C 1570d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1571d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1572d382aafbSBarry Smith PetscMemmove() in that case. 1573d382aafbSBarry Smith 1574d382aafbSBarry Smith Not Collective 1575d382aafbSBarry Smith 1576d382aafbSBarry Smith Input Parameters: 1577d382aafbSBarry Smith + b - pointer to initial memory space 1578d382aafbSBarry Smith - n - length (in bytes) of space to copy 1579d382aafbSBarry Smith 1580d382aafbSBarry Smith Output Parameter: 1581d382aafbSBarry Smith . a - pointer to copy space 1582d382aafbSBarry Smith 1583d382aafbSBarry Smith Level: intermediate 1584d382aafbSBarry Smith 1585d382aafbSBarry Smith Compile Option: 1586d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1587d382aafbSBarry Smith for memory copies on double precision values. 1588d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1589d382aafbSBarry Smith for memory copies on double precision values. 1590d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1591d382aafbSBarry Smith for memory copies on double precision values. 1592d382aafbSBarry Smith 1593d382aafbSBarry Smith Note: 1594580bdb30SBarry Smith Prefer PetscArraycpy() 1595d382aafbSBarry Smith This routine is analogous to memcpy(). 15961fd49c25SBarry Smith Not available from Fortran 15971fd49c25SBarry Smith 1598f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1599f5f57ec0SBarry Smith 1600580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1601d382aafbSBarry Smith 1602d382aafbSBarry Smith @*/ 16037087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1604d382aafbSBarry Smith { 1605d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1606c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1607c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1608a7e36092SMatthew G Knepley PetscFunctionBegin; 1609e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1610e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1611a7e36092SMatthew G Knepley #else 1612d382aafbSBarry Smith PetscFunctionBegin; 1613a7e36092SMatthew G Knepley #endif 1614a47a537aSLisandro Dalcin if (a != b && n > 0) { 1615d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1616e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1617d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1618d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1619d382aafbSBarry Smith #endif 1620d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1621c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1622d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1623d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1624c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1625c5df96a5SBarry Smith PetscErrorCode ierr; 1626c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 16278b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1628d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1629d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1630d382aafbSBarry Smith #else 1631d382aafbSBarry Smith size_t i; 1632d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1633d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1634d382aafbSBarry Smith #endif 1635d382aafbSBarry Smith } else { 1636d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1637d382aafbSBarry Smith } 1638d382aafbSBarry Smith #else 1639d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1640d382aafbSBarry Smith #endif 1641d382aafbSBarry Smith } 1642d382aafbSBarry Smith PetscFunctionReturn(0); 1643d382aafbSBarry Smith } 1644d382aafbSBarry Smith 1645d382aafbSBarry Smith /*@C 1646d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1647d382aafbSBarry Smith 1648d382aafbSBarry Smith Not Collective 1649d382aafbSBarry Smith 1650d382aafbSBarry Smith Input Parameters: 1651d382aafbSBarry Smith + a - pointer to beginning memory location 1652d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1653d382aafbSBarry Smith 1654d382aafbSBarry Smith Level: intermediate 1655d382aafbSBarry Smith 1656d382aafbSBarry Smith Compile Option: 1657d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1658d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1659d382aafbSBarry Smith 16601fd49c25SBarry Smith Not available from Fortran 1661857a15f1SBarry Smith Prefer PetscArrayzero() 16621fd49c25SBarry Smith 1663503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1664503cfb0cSBarry Smith 1665580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1666d382aafbSBarry Smith @*/ 16677087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1668d382aafbSBarry Smith { 1669d382aafbSBarry Smith if (n > 0) { 1670d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1671e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1672d382aafbSBarry Smith #endif 1673d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1674d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1675d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1676d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1677d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1678d382aafbSBarry Smith } else { 1679d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1680d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1681d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1682d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1683d382aafbSBarry Smith } else { 1684d382aafbSBarry Smith #endif 1685d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1686d382aafbSBarry Smith bzero((char *)a,n); 1687d382aafbSBarry Smith #else 1688d382aafbSBarry Smith memset((char*)a,0,n); 1689d382aafbSBarry Smith #endif 1690d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1691d382aafbSBarry Smith } 1692d382aafbSBarry Smith #endif 1693d382aafbSBarry Smith } 1694d382aafbSBarry Smith return 0; 1695d382aafbSBarry Smith } 1696d382aafbSBarry Smith 1697d382aafbSBarry Smith /*MC 1698580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1699580bdb30SBarry Smith 1700580bdb30SBarry Smith Synopsis: 1701580bdb30SBarry Smith #include <petscsys.h> 1702580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1703580bdb30SBarry Smith 1704580bdb30SBarry Smith Not Collective 1705580bdb30SBarry Smith 1706580bdb30SBarry Smith Input Parameters: 1707580bdb30SBarry Smith + str1 - First array 1708580bdb30SBarry Smith . str2 - Second array 1709580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1710580bdb30SBarry Smith 1711580bdb30SBarry Smith Output Parameters: 1712580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1713580bdb30SBarry Smith 1714580bdb30SBarry Smith Level: intermediate 1715580bdb30SBarry Smith 1716580bdb30SBarry Smith Note: 1717857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1718580bdb30SBarry Smith The arrays must be of the same type 1719580bdb30SBarry Smith 1720580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1721580bdb30SBarry Smith PetscArraymove() 1722580bdb30SBarry Smith M*/ 1723*7e5b6bb1SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(cnt)*sizeof(*(str1)),e)) 1724580bdb30SBarry Smith 17258f8f2f0dSBarry Smith /*MC 1726580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1727580bdb30SBarry Smith do not overlap 1728580bdb30SBarry Smith 1729580bdb30SBarry Smith Synopsis: 1730580bdb30SBarry Smith #include <petscsys.h> 1731580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1732580bdb30SBarry Smith 1733580bdb30SBarry Smith Not Collective 1734580bdb30SBarry Smith 1735580bdb30SBarry Smith Input Parameters: 1736580bdb30SBarry Smith + str1 - First array 1737580bdb30SBarry Smith . str2 - Second array 1738580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1739580bdb30SBarry Smith 1740580bdb30SBarry Smith Level: intermediate 1741580bdb30SBarry Smith 1742580bdb30SBarry Smith Note: 1743857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1744580bdb30SBarry Smith The arrays must be of the same type 1745580bdb30SBarry Smith 1746580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1747580bdb30SBarry Smith M*/ 1748*7e5b6bb1SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(cnt)*sizeof(*(str1)))) 1749580bdb30SBarry Smith 17508f8f2f0dSBarry Smith /*MC 1751580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1752580bdb30SBarry Smith 1753580bdb30SBarry Smith Synopsis: 1754580bdb30SBarry Smith #include <petscsys.h> 1755580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1756580bdb30SBarry Smith 1757580bdb30SBarry Smith Not Collective 1758580bdb30SBarry Smith 1759580bdb30SBarry Smith Input Parameters: 1760580bdb30SBarry Smith + str1 - First array 1761580bdb30SBarry Smith . str2 - Second array 1762580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1763580bdb30SBarry Smith 1764580bdb30SBarry Smith Level: intermediate 1765580bdb30SBarry Smith 1766580bdb30SBarry Smith Note: 1767857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1768580bdb30SBarry Smith The arrays must be of the same type 1769580bdb30SBarry Smith 1770580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1771580bdb30SBarry Smith M*/ 1772*7e5b6bb1SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(cnt)*sizeof(*(str1)))) 1773580bdb30SBarry Smith 17748f8f2f0dSBarry Smith /*MC 1775580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1776580bdb30SBarry Smith 1777580bdb30SBarry Smith Synopsis: 1778580bdb30SBarry Smith #include <petscsys.h> 1779580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1780580bdb30SBarry Smith 1781580bdb30SBarry Smith Not Collective 1782580bdb30SBarry Smith 1783580bdb30SBarry Smith Input Parameters: 1784580bdb30SBarry Smith + str1 - array 1785580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1786580bdb30SBarry Smith 1787580bdb30SBarry Smith Level: intermediate 1788580bdb30SBarry Smith 1789580bdb30SBarry Smith Note: 1790857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 1791580bdb30SBarry Smith 1792580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 1793580bdb30SBarry Smith M*/ 1794*7e5b6bb1SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(cnt)*sizeof(*(str1))) 1795580bdb30SBarry Smith 1796d382aafbSBarry Smith /*MC 1797d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1798d382aafbSBarry Smith 1799eca87e8dSBarry Smith Synopsis: 1800aaa7dc30SBarry Smith #include <petscsys.h> 1801eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1802eca87e8dSBarry Smith 1803d382aafbSBarry Smith Not Collective 1804d382aafbSBarry Smith 1805d382aafbSBarry Smith Input Parameters: 1806d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1807d382aafbSBarry Smith . n - number of elements to fetch 1808d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 180950d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1810d382aafbSBarry Smith 1811d382aafbSBarry Smith Level: developer 1812d382aafbSBarry Smith 1813d382aafbSBarry Smith Notes: 1814d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1815d382aafbSBarry Smith 181650d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 181750d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 181850d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 181963cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 182063cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 182163cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1822d382aafbSBarry Smith 1823d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1824d382aafbSBarry Smith address). 1825d382aafbSBarry Smith 1826d382aafbSBarry Smith M*/ 1827d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1828d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1829d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1830d382aafbSBarry Smith } while (0) 1831d382aafbSBarry Smith 1832d382aafbSBarry Smith /* 1833d382aafbSBarry Smith Determine if some of the kernel computation routines use 1834d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1835d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1836d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1837e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1838d382aafbSBarry Smith */ 1839d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1840d382aafbSBarry Smith 1841d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1842d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1843d382aafbSBarry Smith #endif 1844d382aafbSBarry Smith 18455a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 18465a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1847d382aafbSBarry Smith #endif 1848d382aafbSBarry Smith 1849d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1850d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1851d382aafbSBarry Smith #endif 1852d382aafbSBarry Smith 1853d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1854d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1855d382aafbSBarry Smith #endif 1856d382aafbSBarry Smith 1857d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1858d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1859d382aafbSBarry Smith #endif 1860d382aafbSBarry Smith 1861d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1862d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1863d382aafbSBarry Smith #endif 1864d382aafbSBarry Smith 1865d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1866d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1867d382aafbSBarry Smith #endif 1868d382aafbSBarry Smith 1869d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1870d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1871d382aafbSBarry Smith #endif 1872d382aafbSBarry Smith 1873d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1874d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1875d382aafbSBarry Smith #endif 1876d382aafbSBarry Smith 1877d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1878d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1879d382aafbSBarry Smith #endif 1880d382aafbSBarry Smith 1881d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1882d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1883d382aafbSBarry Smith #endif 1884d382aafbSBarry Smith 1885d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1886d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1887d382aafbSBarry Smith #endif 1888d382aafbSBarry Smith 1889d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1890d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1891d382aafbSBarry Smith #endif 1892d382aafbSBarry Smith 1893d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1894d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1895d382aafbSBarry Smith #endif 1896d382aafbSBarry Smith 1897d382aafbSBarry Smith #endif 1898d382aafbSBarry Smith 1899d382aafbSBarry Smith /* 1900d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1901d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1902d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 1903d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 1904d382aafbSBarry Smith ugly extern "C" {} wrappers. 1905d382aafbSBarry Smith */ 1906d382aafbSBarry Smith #if defined(__cplusplus) 1907d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 1908d382aafbSBarry Smith # define EXTERN_C_END } 1909d382aafbSBarry Smith #else 1910d382aafbSBarry Smith # define EXTERN_C_BEGIN 1911d382aafbSBarry Smith # define EXTERN_C_END 1912d382aafbSBarry Smith #endif 1913d382aafbSBarry Smith 1914d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 1915d382aafbSBarry Smith 1916d382aafbSBarry Smith /*MC 1917d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1918d382aafbSBarry Smith communication 1919d382aafbSBarry Smith 1920d382aafbSBarry Smith Level: beginner 1921d382aafbSBarry Smith 1922d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1923d382aafbSBarry Smith 1924d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 1925d382aafbSBarry Smith M*/ 1926d382aafbSBarry Smith 1927d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 1928014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1929014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1930d382aafbSBarry Smith #endif 1931d382aafbSBarry Smith 1932d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 1933d382aafbSBarry Smith 1934d382aafbSBarry Smith /* Limit MPI to 32-bits */ 1935d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 1936d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 1937d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 1938d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 1939d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 1940d382aafbSBarry Smith 194161b0d812SBarry Smith /*@C 194261b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 194361b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 194461b0d812SBarry Smith 194561b0d812SBarry Smith Not Collective 194661b0d812SBarry Smith 194761b0d812SBarry Smith Input Parameter: 194861b0d812SBarry Smith . a - the PetscInt value 194961b0d812SBarry Smith 195061b0d812SBarry Smith Output Parameter: 195161b0d812SBarry Smith . b - the resulting PetscBLASInt value 195261b0d812SBarry Smith 195361b0d812SBarry Smith Level: advanced 195461b0d812SBarry Smith 19551fd49c25SBarry Smith Not available from Fortran 19561fd49c25SBarry Smith 195761b0d812SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast() 195861b0d812SBarry Smith @*/ 1959c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 1960c5df96a5SBarry Smith { 1961c5df96a5SBarry Smith PetscFunctionBegin; 1962ab7117d1SBarry Smith *b = (PetscBLASInt)(a); 1963c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 1964c5df96a5SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK"); 1965c5df96a5SBarry Smith #endif 1966c5df96a5SBarry Smith PetscFunctionReturn(0); 1967c5df96a5SBarry Smith } 1968c5df96a5SBarry Smith 196961b0d812SBarry Smith /*@C 197061b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 197161b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 197261b0d812SBarry Smith 197361b0d812SBarry Smith Not Collective 197461b0d812SBarry Smith 197561b0d812SBarry Smith Input Parameter: 197661b0d812SBarry Smith . a - the PetscInt value 197761b0d812SBarry Smith 197861b0d812SBarry Smith Output Parameter: 197961b0d812SBarry Smith . b - the resulting PetscMPIInt value 198061b0d812SBarry Smith 198161b0d812SBarry Smith Level: advanced 198261b0d812SBarry Smith 19831fd49c25SBarry Smith Not available from Fortran 19841fd49c25SBarry Smith 198561b0d812SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast() 198661b0d812SBarry Smith @*/ 19874dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 19884dc2109aSBarry Smith { 19894dc2109aSBarry Smith PetscFunctionBegin; 1990ab7117d1SBarry Smith *b = (PetscMPIInt)(a); 19914dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 19924dc2109aSBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI"); 19934dc2109aSBarry Smith #endif 19944dc2109aSBarry Smith PetscFunctionReturn(0); 19954dc2109aSBarry Smith } 19964dc2109aSBarry Smith 1997bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 19982f18eb33SBarry Smith 19992f18eb33SBarry Smith /*@C 20002f18eb33SBarry Smith 20012f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 20022f18eb33SBarry Smith 20032f18eb33SBarry Smith Not Collective 20042f18eb33SBarry Smith 20052f18eb33SBarry Smith Input Parameter: 20062f18eb33SBarry Smith + a - the PetscReal value 20072f18eb33SBarry Smith - b - the second value 20082f18eb33SBarry Smith 2009390e1bf2SBarry Smith Returns: 2010390e1bf2SBarry Smith the result as a PetscInt value 20112f18eb33SBarry Smith 2012bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 20132f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 20142f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 20152f18eb33SBarry Smith 2016e28ce29aSPatrick Sanan Developers Note: 2017e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 20182f18eb33SBarry Smith 20192f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 20202f18eb33SBarry Smith 20211fd49c25SBarry Smith Not available from Fortran 20221fd49c25SBarry Smith 20232f18eb33SBarry Smith Level: advanced 20242f18eb33SBarry Smith 2025390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 20262f18eb33SBarry Smith @*/ 20272f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 20282f18eb33SBarry Smith { 2029bafee8b4SSatish Balay PetscInt64 r; 20302f18eb33SBarry Smith 2031bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 20322f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 20332f18eb33SBarry Smith return (PetscInt) r; 20342f18eb33SBarry Smith } 20352f18eb33SBarry Smith 20362f18eb33SBarry Smith /*@C 20372f18eb33SBarry Smith 20382f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 20392f18eb33SBarry Smith 20402f18eb33SBarry Smith Not Collective 20412f18eb33SBarry Smith 20422f18eb33SBarry Smith Input Parameter: 20432f18eb33SBarry Smith + a - the PetscInt value 20442f18eb33SBarry Smith - b - the second value 20452f18eb33SBarry Smith 2046390e1bf2SBarry Smith Returns: 2047390e1bf2SBarry Smith the result as a PetscInt value 20482f18eb33SBarry Smith 2049bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 20502f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 20512f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 20522f18eb33SBarry Smith 20531fd49c25SBarry Smith Not available from Fortran 20541fd49c25SBarry Smith 20552f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 20562f18eb33SBarry Smith 20572f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 20582f18eb33SBarry Smith 20592f18eb33SBarry Smith Level: advanced 20602f18eb33SBarry Smith 2061390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 20622f18eb33SBarry Smith @*/ 20632f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 20642f18eb33SBarry Smith { 2065bafee8b4SSatish Balay PetscInt64 r; 20662f18eb33SBarry Smith 2067bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 20682f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 20692f18eb33SBarry Smith return (PetscInt) r; 20702f18eb33SBarry Smith } 20712f18eb33SBarry Smith 2072f91af8c7SBarry Smith /*@C 2073f91af8c7SBarry Smith 2074f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2075f91af8c7SBarry Smith 2076f91af8c7SBarry Smith Not Collective 2077f91af8c7SBarry Smith 2078f91af8c7SBarry Smith Input Parameter: 2079f91af8c7SBarry Smith + a - the PetscInt value 2080f91af8c7SBarry Smith - b - the second value 2081f91af8c7SBarry Smith 2082390e1bf2SBarry Smith Returns: 2083390e1bf2SBarry Smith the result as a PetscInt value 2084f91af8c7SBarry Smith 2085bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2086f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2087f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2088f91af8c7SBarry Smith 2089f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2090f91af8c7SBarry Smith 2091f5f57ec0SBarry Smith Not available from Fortran 2092f5f57ec0SBarry Smith 2093f91af8c7SBarry Smith Level: advanced 2094f91af8c7SBarry Smith 2095390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2096f91af8c7SBarry Smith @*/ 2097f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2098f91af8c7SBarry Smith { 2099bafee8b4SSatish Balay PetscInt64 r; 2100f91af8c7SBarry Smith 2101bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2102f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2103f91af8c7SBarry Smith return (PetscInt) r; 2104f91af8c7SBarry Smith } 2105f91af8c7SBarry Smith 21062f18eb33SBarry Smith /*@C 21072f18eb33SBarry Smith 21082f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 21092f18eb33SBarry Smith 21102f18eb33SBarry Smith Not Collective 21112f18eb33SBarry Smith 21122f18eb33SBarry Smith Input Parameter: 21132f18eb33SBarry Smith + a - the PetscInt value 21142f18eb33SBarry Smith - b - the second value 21152f18eb33SBarry Smith 21162f18eb33SBarry Smith Output Parameter:ma 2117390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 21182f18eb33SBarry Smith 2119bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 21202f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 21212f18eb33SBarry Smith 2122f5f57ec0SBarry Smith Not available from Fortran 2123f5f57ec0SBarry Smith 2124220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 21252f18eb33SBarry Smith 21262f18eb33SBarry Smith Level: advanced 21272f18eb33SBarry Smith 2128220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 21292f18eb33SBarry Smith @*/ 21302f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 21312f18eb33SBarry Smith { 2132bafee8b4SSatish Balay PetscInt64 r; 21332f18eb33SBarry Smith 21342f18eb33SBarry Smith PetscFunctionBegin; 2135bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 21362f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 21372f18eb33SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 21382f18eb33SBarry Smith #endif 2139f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2140f91af8c7SBarry Smith PetscFunctionReturn(0); 2141f91af8c7SBarry Smith } 2142f91af8c7SBarry Smith 2143f91af8c7SBarry Smith /*@C 2144f91af8c7SBarry Smith 2145fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2146f91af8c7SBarry Smith 2147f91af8c7SBarry Smith Not Collective 2148f91af8c7SBarry Smith 2149f91af8c7SBarry Smith Input Parameter: 2150f91af8c7SBarry Smith + a - the PetscInt value 2151f91af8c7SBarry Smith - b - the second value 2152f91af8c7SBarry Smith 2153f91af8c7SBarry Smith Output Parameter:ma 2154390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2155f91af8c7SBarry Smith 2156bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2157f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2158f91af8c7SBarry Smith 2159f5f57ec0SBarry Smith Not available from Fortran 2160f5f57ec0SBarry Smith 2161f91af8c7SBarry Smith Level: advanced 2162f91af8c7SBarry Smith 2163390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2164f91af8c7SBarry Smith @*/ 2165f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2166f91af8c7SBarry Smith { 2167bafee8b4SSatish Balay PetscInt64 r; 2168f91af8c7SBarry Smith 2169f91af8c7SBarry Smith PetscFunctionBegin; 2170bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2171f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2172f91af8c7SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2173f91af8c7SBarry Smith #endif 2174f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 21752f18eb33SBarry Smith PetscFunctionReturn(0); 21762f18eb33SBarry Smith } 2177c5df96a5SBarry Smith 2178d382aafbSBarry Smith /* 21792981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2180d382aafbSBarry Smith */ 2181d382aafbSBarry Smith #if defined(hz) 2182d382aafbSBarry Smith # undef hz 2183d382aafbSBarry Smith #endif 2184d382aafbSBarry Smith 218515a5570dSLisandro Dalcin #include <limits.h> 218615a5570dSLisandro Dalcin 218715a5570dSLisandro Dalcin /* The number of bits in a byte */ 218815a5570dSLisandro Dalcin 218915a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 219015a5570dSLisandro Dalcin 2191d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2192d382aafbSBarry Smith 2193d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2194d382aafbSBarry Smith # include <sys/param.h> 2195d382aafbSBarry Smith #endif 2196d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2197d382aafbSBarry Smith # include <sys/types.h> 2198d382aafbSBarry Smith #endif 2199d382aafbSBarry Smith #if defined(MAXPATHLEN) 2200d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2201d382aafbSBarry Smith #elif defined(MAX_PATH) 2202d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2203d382aafbSBarry Smith #elif defined(_MAX_PATH) 2204d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2205d382aafbSBarry Smith #else 2206d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2207d382aafbSBarry Smith #endif 2208d382aafbSBarry Smith 2209d382aafbSBarry Smith /*MC 2210d382aafbSBarry Smith 221166d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 221266d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 221366d79e26SBarry Smith 221466d79e26SBarry Smith 221566d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 221666d79e26SBarry Smith 221766d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 221866d79e26SBarry Smith 221966d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 222066d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 222166d79e26SBarry Smith 222266d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 222366d79e26SBarry Smith 222466d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 222566d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 222666d79e26SBarry Smith version number (x.y.z). 222766d79e26SBarry Smith 222866d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 222966d79e26SBarry Smith 223066d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 223166d79e26SBarry Smith 223266d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 223366d79e26SBarry Smith 223466d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 223566d79e26SBarry Smith 223666d79e26SBarry Smith Level: intermediate 223766d79e26SBarry Smith 223866d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 223966d79e26SBarry Smith 224066d79e26SBarry Smith M*/ 224166d79e26SBarry Smith 224266d79e26SBarry Smith /*MC 224366d79e26SBarry Smith 22441b266c99SBarry Smith UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning 22451b266c99SBarry Smith of every function and module definition you need something like 2246d382aafbSBarry Smith 2247d382aafbSBarry Smith $ 2248af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" 22490f665fc7SPatrick Sanan $ use petscXXX 22501b266c99SBarry Smith 2251692afcd8SPatrick Sanan You can declare PETSc variables using either of the following. 22521b266c99SBarry Smith 2253d382aafbSBarry Smith $ XXX variablename 22541b266c99SBarry Smith $ type(tXXX) variablename 22551b266c99SBarry Smith 2256692afcd8SPatrick Sanan For example, 22571b266c99SBarry Smith 2258bfc4c25eSBarry Smith $#include "petsc/finclude/petscvec.h" 22591b266c99SBarry Smith $ use petscvec 2260d382aafbSBarry Smith $ 2261692afcd8SPatrick Sanan $ Vec b 2262692afcd8SPatrick Sanan $ type(tVec) x 2263d382aafbSBarry Smith 2264d382aafbSBarry Smith Level: beginner 2265d382aafbSBarry Smith 2266d382aafbSBarry Smith M*/ 2267d382aafbSBarry Smith 2268014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2269014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2270014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2271014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2272014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2273014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 227427710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 22755f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2276d382aafbSBarry Smith 2277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 227822ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 228060e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2281d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2282014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2283014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2284014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 22856c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 228617d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 228717d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 22895569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2290014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 229117df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 229339f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2294014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2295745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 229639f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2299014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 23006c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 23016c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2302e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2303d382aafbSBarry Smith 2304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2306d382aafbSBarry Smith 230776bdecfbSBarry Smith /*J 2308d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2309d382aafbSBarry Smith 2310d382aafbSBarry Smith Level: beginner 2311d382aafbSBarry Smith 2312e28ce29aSPatrick Sanan Notes: 2313e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 231425ccb61fSToby Isaac with the option --download-sprng or --download-random123 2315d382aafbSBarry Smith 23168f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 231776bdecfbSBarry Smith J*/ 231819fd82e9SBarry Smith typedef const char* PetscRandomType; 2319d382aafbSBarry Smith #define PETSCRAND "rand" 2320d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2321d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2322c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 232325ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2324d382aafbSBarry Smith 2325d382aafbSBarry Smith /* Logging support */ 2326014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2327d382aafbSBarry Smith 2328607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2329d382aafbSBarry Smith 2330d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2331140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2332d382aafbSBarry Smith 2333bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 233419fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2335014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 233619fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*); 2337685405a1SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscRandomViewFromOptions(PetscRandom A,PetscObject obj,const char name[]) {return PetscObjectViewFromOptions((PetscObject)A,obj,name);} 2338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2339d382aafbSBarry Smith 2340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2349d382aafbSBarry Smith 2350014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2351014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2352014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 235797540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 23588a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 235997540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2360d382aafbSBarry Smith 236130815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 236230815ce0SLisandro Dalcin 23639860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 23649860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2365014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool); 23669860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool); 2367014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2369014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2370014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2371014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2372014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2373014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2374c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2375e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2376c891a504SStefano Zampini #endif 2377d382aafbSBarry Smith 2378014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2379014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2380014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2381d382aafbSBarry Smith 2382014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2383014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool ); 2384014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2385014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2388d382aafbSBarry Smith 2389014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2390014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2391014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2392014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2393014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2394cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2395cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2396d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2397d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2398d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2399d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 24006afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 24016afbe7ddSJed Brown MPI_Request**,MPI_Request**, 24026afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 24036afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 24046afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2405d382aafbSBarry Smith 24066145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 24076145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 24086145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 24096145cd65SJed Brown 2410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2411d382aafbSBarry Smith 2412ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2413ce94432eSBarry Smith 241445487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 241545487dadSJed Brown 2416d382aafbSBarry Smith struct _n_PetscSubcomm { 2417d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2418d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2419306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 242045487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 242145487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2422708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 242345487dadSJed Brown PetscSubcommType type; 2424e5acf8a4SHong Zhang char *subcommprefix; 2425d382aafbSBarry Smith }; 2426d382aafbSBarry Smith 2427c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2428306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 242936be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 243465d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2435053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2436f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2437e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2438d382aafbSBarry Smith 24399962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 24409962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 24419962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 24429962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 24439962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 24449962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 24459962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 24469962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 24479962606eSBarry Smith 24485e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 24495f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 24505f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 24515f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 24525f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 24535e71baefSBarry Smith 2454a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2455a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2456a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2457a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2458a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2459a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2460a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2461a32e93adSJunchao Zhang 246213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 24630f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 246413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2465137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2466137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2467137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 246813e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 246913e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 24700f453b92SJed Brown 24715e71baefSBarry Smith 2472471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2473471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2474471ecdacSJed Brown * possible. */ 247535005c2bSLisandro Dalcin PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,PetscInt count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,(size_t)count,(void**)slot);} 2476d382aafbSBarry Smith 24779de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 24789de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 24799de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 24809de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 24819de0f6ecSBarry Smith 2482ace2fbaeSBarry Smith #include <stdarg.h> 2483ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2484ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2485ace2fbaeSBarry Smith 2486268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2487fbfcfee5SBarry Smith 24881f817a21SBarry Smith /*@C 24891f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 24901f817a21SBarry Smith 24911f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 24921f817a21SBarry Smith 24931f817a21SBarry Smith Input Parameters: 24941f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 24951f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 24961f817a21SBarry Smith 2497850545d0SSatish Balay Level: intermediate 2498850545d0SSatish Balay 2499f5f57ec0SBarry Smith Not available from Fortran 2500f5f57ec0SBarry Smith 25011f817a21SBarry Smith Options Database: 2502063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 25031f817a21SBarry Smith @*/ 2504dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2505dff31646SBarry Smith { 2506dff31646SBarry Smith size_t len; 2507dff31646SBarry Smith char *vstring; 2508dff31646SBarry Smith PetscErrorCode ierr; 2509dff31646SBarry Smith 25101f817a21SBarry Smith PetscFunctionBegin; 25118d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2512dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 251335005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2514580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2515dff31646SBarry Smith if (set) *set = PETSC_TRUE; 25161f817a21SBarry Smith PetscFunctionReturn(0); 2517dff31646SBarry Smith } 2518dff31646SBarry Smith 2519b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2520fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2521fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2522f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2523fe278a28SBarry Smith 2524f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2525f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2526b967cddfSBarry Smith 25279f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 25289f4d3c52SBarry Smith 252904102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2530763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2531dff31646SBarry Smith 253268e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 25335dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2534d382aafbSBarry Smith 2535b2566f29SBarry Smith 2536b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2537b2566f29SBarry Smith /* 2538b2566f29SBarry Smith Verify that all processes in the communicator have called this from the same line of code 2539b2566f29SBarry Smith */ 25408f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 254177a5e07dSBarry Smith 254277a5e07dSBarry Smith /*MC 254377a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 254477a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 254577a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 254677a5e07dSBarry Smith 2547d083f849SBarry Smith Collective 254877a5e07dSBarry Smith 254977a5e07dSBarry Smith Synopsis: 255077a5e07dSBarry Smith #include <petscsys.h> 255177a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 255277a5e07dSBarry Smith 255377a5e07dSBarry Smith Input Parameters: 255477a5e07dSBarry Smith + indata - pointer to the input data to be reduced 255577a5e07dSBarry Smith . count - the number of MPI data items in indata and outdata 255677a5e07dSBarry Smith . datatype - the MPI datatype, for example MPI_INT 255777a5e07dSBarry Smith . op - the MPI operation, for example MPI_SUM 255877a5e07dSBarry Smith - comm - the MPI communicator on which the operation occurs 255977a5e07dSBarry Smith 256077a5e07dSBarry Smith Output Parameter: 256177a5e07dSBarry Smith . outdata - the reduced values 256277a5e07dSBarry Smith 2563e28ce29aSPatrick Sanan Notes: 2564e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 256577a5e07dSBarry Smith 256677a5e07dSBarry Smith Level: developer 256777a5e07dSBarry Smith 256877a5e07dSBarry Smith .seealso: MPI_Allreduce() 256977a5e07dSBarry Smith M*/ 2570fbfcfee5SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 2571b2566f29SBarry Smith #else 2572b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 2573b2566f29SBarry Smith #endif 2574b2566f29SBarry Smith 25756f7079ddSSatish Balay #if defined(PETSC_HAVE_MPI_WIN_CREATE_FEATURE) 25768198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 25778198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 25782f065d89SBarry Smith #endif 25798198064fSBarry Smith 258012801b39SBarry Smith /* 258112801b39SBarry Smith Returned from PETSc functions that are called from MPI, such as related to attributes 258212801b39SBarry Smith */ 25838ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CLASS; 25848ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CODE; 258512801b39SBarry Smith 2586d382aafbSBarry Smith #endif 2587