1d382aafbSBarry Smith /* 2d382aafbSBarry Smith This is the main PETSc include file (for C and C++). It is included by all 3d382aafbSBarry Smith other PETSc include files, so it almost never has to be specifically included. 4d382aafbSBarry Smith */ 526bd1501SBarry Smith #if !defined(PETSCSYS_H) 626bd1501SBarry Smith #define PETSCSYS_H 7d382aafbSBarry Smith /* ========================================================================== */ 8d382aafbSBarry Smith /* 9d382aafbSBarry Smith petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 101cc8b206SBarry Smith found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 111cc8b206SBarry Smith For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 121cc8b206SBarry Smith directory as the other PETSc include files. 13d382aafbSBarry Smith */ 142c8e378dSBarry Smith #include <petscconf.h> 152c8e378dSBarry Smith #include <petscfix.h> 16d382aafbSBarry Smith 1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 1873fca5a0SBarry Smith /* 1973fca5a0SBarry Smith Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 2073fca5a0SBarry Smith We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 2173fca5a0SBarry Smith */ 22216f1ae6SBarry Smith # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 2373fca5a0SBarry Smith # define _POSIX_C_SOURCE 200112L 2473fca5a0SBarry Smith # endif 25216f1ae6SBarry Smith # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 2673fca5a0SBarry Smith # define _BSD_SOURCE 2773fca5a0SBarry Smith # endif 2807f00807SSatish Balay # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 2907f00807SSatish Balay # define _DEFAULT_SOURCE 3007f00807SSatish Balay # endif 31ea0fecefSShri Abhyankar # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 32ea0fecefSShri Abhyankar # define _GNU_SOURCE 33ea0fecefSShri Abhyankar # endif 3473fca5a0SBarry Smith #endif 3573fca5a0SBarry Smith 36df4397b0SStefano Zampini #include <petscsystypes.h> 37df4397b0SStefano Zampini 38d382aafbSBarry Smith /* ========================================================================== */ 39d382aafbSBarry Smith /* 402c280183SJed Brown This facilitates using the C version of PETSc from C++ and the C++ version from C. 41d382aafbSBarry Smith */ 421ec50b02SJed Brown #if defined(__cplusplus) 431ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 441ec50b02SJed Brown #else 451ec50b02SJed Brown # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 461ec50b02SJed Brown #endif 47d382aafbSBarry Smith 48c5e4d11fSDmitry Karpeev /* ========================================================================== */ 49c5e4d11fSDmitry Karpeev /* 50c5e4d11fSDmitry Karpeev Since PETSc manages its own extern "C" handling users should never include PETSc include 511cc8b206SBarry Smith files within extern "C". This will generate a compiler error if a user does put the include 521cc8b206SBarry Smith file within an extern "C". 53c5e4d11fSDmitry Karpeev */ 54c5e4d11fSDmitry Karpeev #if defined(__cplusplus) 55c5e4d11fSDmitry Karpeev void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 56c5e4d11fSDmitry Karpeev #endif 57c5e4d11fSDmitry Karpeev 58ed938b00SJed Brown #if defined(__cplusplus) 59ed938b00SJed Brown # define PETSC_RESTRICT PETSC_CXX_RESTRICT 60ed938b00SJed Brown #else 61ed938b00SJed Brown # define PETSC_RESTRICT PETSC_C_RESTRICT 62ed938b00SJed Brown #endif 63ed938b00SJed Brown 64ed938b00SJed Brown #if defined(__cplusplus) 6558c433abSLisandro Dalcin # define PETSC_INLINE PETSC_CXX_INLINE 66ed938b00SJed Brown #else 6758c433abSLisandro Dalcin # define PETSC_INLINE PETSC_C_INLINE 68ed938b00SJed Brown #endif 69ed938b00SJed Brown 7058c433abSLisandro Dalcin #define PETSC_STATIC_INLINE static PETSC_INLINE 7158c433abSLisandro Dalcin 72ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 73014dd563SJed Brown # define PETSC_DLLEXPORT __declspec(dllexport) 74014dd563SJed Brown # define PETSC_DLLIMPORT __declspec(dllimport) 7521f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 7626703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 7726703958SBarry Smith # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 7826703958SBarry Smith # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 7926703958SBarry Smith # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 8026703958SBarry Smith #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 81014dd563SJed Brown # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 82014dd563SJed Brown # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 8321f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 84d382aafbSBarry Smith #else 85014dd563SJed Brown # define PETSC_DLLEXPORT 86014dd563SJed Brown # define PETSC_DLLIMPORT 8721f66b81SJed Brown # define PETSC_VISIBILITY_INTERNAL 88014dd563SJed Brown #endif 89014dd563SJed Brown 90014dd563SJed Brown #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 91014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 92014dd563SJed Brown #else /* Win32 users need this to import symbols from petsc.dll */ 93014dd563SJed Brown # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 94014dd563SJed Brown #endif 95014dd563SJed Brown 961cc8b206SBarry Smith /* 971cc8b206SBarry Smith Functions tagged with PETSC_EXTERN in the header files are 981cc8b206SBarry Smith always defined as extern "C" when compiled with C++ so they may be 991cc8b206SBarry Smith used from C and are always visible in the shared libraries 1001cc8b206SBarry Smith */ 1012c280183SJed Brown #if defined(__cplusplus) 102014dd563SJed Brown # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 103638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF extern "C" 10421f66b81SJed Brown # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 105014dd563SJed Brown #else 106014dd563SJed Brown # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 107638cfed1SJed Brown # define PETSC_EXTERN_TYPEDEF 1086258c452SJed Brown # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 109d382aafbSBarry Smith #endif 11027710113SBarry Smith 1112c8e378dSBarry Smith #include <petscversion.h> 112a8d69d7bSBarry Smith #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 113d382aafbSBarry Smith 114d382aafbSBarry Smith /* ========================================================================== */ 115d382aafbSBarry Smith 116d382aafbSBarry Smith /* 117d382aafbSBarry Smith Defines the interface to MPI allowing the use of all MPI functions. 118d382aafbSBarry Smith 119d382aafbSBarry Smith PETSc does not use the C++ binding of MPI at ALL. The following flag 120d382aafbSBarry Smith makes sure the C++ bindings are not included. The C++ bindings REQUIRE 121d382aafbSBarry Smith putting mpi.h before ANY C++ include files, we cannot control this 122d382aafbSBarry Smith with all PETSc users. Users who want to use the MPI C++ bindings can include 123d382aafbSBarry Smith mpicxx.h directly in their code 124d382aafbSBarry Smith */ 125fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX) 126d382aafbSBarry Smith # define MPICH_SKIP_MPICXX 1 127fa9e63e2SJed Brown #endif 128fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX) 129d382aafbSBarry Smith # define OMPI_SKIP_MPICXX 1 130fa9e63e2SJed Brown #endif 131e771154cSJed Brown #if defined(PETSC_HAVE_MPIUNI) 132e771154cSJed Brown # include <petsc/mpiuni/mpi.h> 133e771154cSJed Brown #else 1342c8e378dSBarry Smith # include <mpi.h> 135e771154cSJed Brown #endif 13665013866SBarry Smith 1374e1ad211SJed Brown /*MC 1384e1ad211SJed Brown PetscDefined - determine whether a boolean macro is defined 1394e1ad211SJed Brown 1404e1ad211SJed Brown Notes: 1414e1ad211SJed Brown Typical usage is within normal code, 1424e1ad211SJed Brown 1434e1ad211SJed Brown $ if (PetscDefined(USE_DEBUG)) { ... } 1444e1ad211SJed Brown 1454e1ad211SJed Brown but can also be used in the preprocessor, 1464e1ad211SJed Brown 1474e1ad211SJed Brown $ #if PetscDefined(USE_DEBUG) 1484e1ad211SJed Brown $ ... 1494e1ad211SJed Brown $ #else 1504e1ad211SJed Brown 1514e1ad211SJed Brown Either way evaluates true if PETSC_USE_DEBUG is defined (merely defined or defined to 1) or undefined. This macro 1524e1ad211SJed Brown should not be used if its argument may be defined to a non-empty value other than 1. 1534e1ad211SJed Brown 1544e1ad211SJed Brown Developer Notes: 1554e1ad211SJed Brown Getting something that works in C and CPP for an arg that may or may not be defined is tricky. Here, if we have 1564e1ad211SJed Brown "#define PETSC_HAVE_BOOGER 1" we match on the placeholder define, insert the "0," for arg1 and generate the triplet 1574e1ad211SJed Brown (0, 1, 0). Then the last step cherry picks the 2nd arg (a one). When PETSC_HAVE_BOOGER is not defined, we generate 1584e1ad211SJed Brown a (... 1, 0) pair, and when the last step cherry picks the 2nd arg, we get a zero. 1594e1ad211SJed Brown 1604e1ad211SJed Brown Our extra expansion via PetscDefined__take_second_expand() is needed with MSVC, which has a nonconforming 1614e1ad211SJed Brown implementation of variadic macros. 1624e1ad211SJed Brown 1634e1ad211SJed Brown Level: developer 1644e1ad211SJed Brown M*/ 1654e1ad211SJed Brown #if !defined(PETSC_SKIP_VARIADIC_MACROS) 1664e1ad211SJed Brown # define PetscDefined_arg_1 shift, 1674e1ad211SJed Brown # define PetscDefined_arg_ shift, 1684e1ad211SJed Brown # define PetscDefined__take_second_expanded(ignored, val, ...) val 1694e1ad211SJed Brown # define PetscDefined__take_second_expand(args) PetscDefined__take_second_expanded args 1704e1ad211SJed Brown # define PetscDefined__take_second(...) PetscDefined__take_second_expand((__VA_ARGS__)) 1714e1ad211SJed Brown # define PetscDefined___(arg1_or_junk) PetscDefined__take_second(arg1_or_junk 1, 0, at_) 1724e1ad211SJed Brown # define PetscDefined__(value) PetscDefined___(PetscDefined_arg_ ## value) 1734e1ad211SJed Brown # define PetscDefined_(d) PetscDefined__(d) 1744e1ad211SJed Brown # define PetscDefined(d) PetscDefined_(PETSC_ ## d) 1754e1ad211SJed Brown #endif 1764e1ad211SJed Brown 177d382aafbSBarry Smith /* 178a7886beaSBarry Smith Perform various sanity checks that the correct mpi.h is being included at compile time. 179a7886beaSBarry Smith This usually happens because 180a7886beaSBarry Smith * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 181a7886beaSBarry Smith * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 182a7886beaSBarry Smith */ 183a7886beaSBarry Smith #if defined(PETSC_HAVE_MPIUNI) 184c9b973beSBarry Smith # if !defined(MPIUNI_H) 185a7886beaSBarry Smith # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 186a7886beaSBarry Smith # endif 18741f4af4cSSatish Balay #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 18841f4af4cSSatish Balay # if !defined(I_MPI_NUMVERSION) 18941f4af4cSSatish Balay # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 19041f4af4cSSatish Balay # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 19141f4af4cSSatish Balay # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 19241f4af4cSSatish Balay # endif 19341f4af4cSSatish Balay #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 19441f4af4cSSatish Balay # if !defined(MVAPICH2_NUMVERSION) 19541f4af4cSSatish Balay # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 19641f4af4cSSatish Balay # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 19741f4af4cSSatish Balay # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 19841f4af4cSSatish Balay # endif 199a7886beaSBarry Smith #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 20041f4af4cSSatish Balay # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 201a7886beaSBarry Smith # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 202ca70f86eSJed Brown # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 203a7886beaSBarry Smith # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 204a7886beaSBarry Smith # endif 205a7886beaSBarry Smith #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 206a7886beaSBarry Smith # if !defined(OMPI_MAJOR_VERSION) 207a7886beaSBarry Smith # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 208ca70f86eSJed Brown # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 209c3ac57cfSSatish Balay # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 210a7886beaSBarry Smith # endif 211d97fd468SStefano Zampini #elif defined(PETSC_HAVE_MSMPI_VERSION) 212d97fd468SStefano Zampini # if !defined(MSMPI_VER) 213d97fd468SStefano Zampini # error "PETSc was configured with MSMPI but now appears to be compiling using a non-MSMPI mpi.h" 214d97fd468SStefano Zampini # elif (MSMPI_VER != PETSC_HAVE_MSMPI_VERSION) 215d97fd468SStefano Zampini # error "PETSc was configured with one MSMPI mpi.h version but now appears to be compiling using a different MSMPI mpi.h version" 216d97fd468SStefano Zampini # endif 217d97fd468SStefano Zampini #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) || defined(MSMPI_VER) 218d97fd468SStefano Zampini # error "PETSc was configured with undetermined MPI - but now appears to be compiling using any of OpenMPI, MS-MPI or a MPICH variant" 219a7886beaSBarry Smith #endif 220a7886beaSBarry Smith 221a7886beaSBarry Smith /* 2222981ebdbSBarry Smith Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 223d382aafbSBarry Smith see the top of mpicxx.h in the MPICH2 distribution. 224d382aafbSBarry Smith */ 225d382aafbSBarry Smith #include <stdio.h> 226d382aafbSBarry Smith 227d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 228d382aafbSBarry Smith #if !defined(MPIAPI) 229d382aafbSBarry Smith #define MPIAPI 230d382aafbSBarry Smith #endif 231d382aafbSBarry Smith 2321cc8b206SBarry Smith /* 2331cc8b206SBarry Smith Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 2341cc8b206SBarry Smith This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 2351cc8b206SBarry Smith does not match the actual type of the argument being passed in 2361cc8b206SBarry Smith */ 237c5e4d11fSDmitry Karpeev #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 238894dd566SJed Brown # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 239894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 2408ad47952SJed Brown # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 2418ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 242894dd566SJed Brown # endif 243894dd566SJed Brown #endif 244894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType) 245894dd566SJed Brown # define PetscAttrMPIPointerWithType(bufno,typeno) 2468ad47952SJed Brown # define PetscAttrMPITypeTag(type) 2478ad47952SJed Brown # define PetscAttrMPITypeTagLayoutCompatible(type) 248894dd566SJed Brown #endif 249b3506946SBarry Smith 2505a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 251df4397b0SStefano Zampini PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 252e28ce29aSPatrick Sanan 253e28ce29aSPatrick Sanan /*MC 254e28ce29aSPatrick Sanan MPIU_INT - MPI datatype corresponding to PetscInt 255e28ce29aSPatrick Sanan 256e28ce29aSPatrick Sanan Notes: 257e28ce29aSPatrick Sanan In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 258e28ce29aSPatrick Sanan 259e28ce29aSPatrick Sanan Level: beginner 260e28ce29aSPatrick Sanan 261e28ce29aSPatrick Sanan .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 262e28ce29aSPatrick Sanan M*/ 263e28ce29aSPatrick Sanan 26437354ed4SSatish Balay #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 265bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 266a05e1a72SSatish Balay # define PetscInt64_FMT PRId64 267fab38c73SJed Brown #elif (PETSC_SIZEOF_LONG_LONG == 8) 268bd84f1cfSSatish Balay # define MPIU_INT64 MPI_LONG_LONG_INT 269a05e1a72SSatish Balay # define PetscInt64_FMT "lld" 270f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64) 271bd84f1cfSSatish Balay # define MPIU_INT64 MPI_INT64_T 272a05e1a72SSatish Balay # define PetscInt64_FMT "ld" 273236ed0a3SSatish Balay #else 274bafee8b4SSatish Balay # error "cannot determine PetscInt64 type" 275236ed0a3SSatish Balay #endif 276b7b8f77aSBarry Smith 2777cdaf61dSJed Brown PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 278b7b8f77aSBarry Smith 279d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 280bd84f1cfSSatish Balay # define MPIU_INT MPIU_INT64 281a05e1a72SSatish Balay # define PetscInt_FMT PetscInt64_FMT 282d382aafbSBarry Smith #else 283d382aafbSBarry Smith # define MPIU_INT MPI_INT 284a05e1a72SSatish Balay # define PetscInt_FMT "d" 285d382aafbSBarry Smith #endif 286d382aafbSBarry Smith 287503cfb0cSBarry Smith /* 288503cfb0cSBarry Smith For the rare cases when one needs to send a size_t object with MPI 289503cfb0cSBarry Smith */ 290e316c87fSJed Brown PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 291d382aafbSBarry Smith 292d382aafbSBarry Smith /* 293d382aafbSBarry Smith You can use PETSC_STDOUT as a replacement of stdout. You can also change 294d382aafbSBarry Smith the value of PETSC_STDOUT to redirect all standard output elsewhere 295d382aafbSBarry Smith */ 296014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT; 297d382aafbSBarry Smith 298d382aafbSBarry Smith /* 299d382aafbSBarry Smith You can use PETSC_STDERR as a replacement of stderr. You can also change 300d382aafbSBarry Smith the value of PETSC_STDERR to redirect all standard error elsewhere 301d382aafbSBarry Smith */ 302014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR; 303d382aafbSBarry Smith 304d382aafbSBarry Smith /*MC 305d382aafbSBarry Smith PetscUnlikely - hints the compiler that the given condition is usually FALSE 306d382aafbSBarry Smith 307d382aafbSBarry Smith Synopsis: 308aaa7dc30SBarry Smith #include <petscsys.h> 309ace3abfcSBarry Smith PetscBool PetscUnlikely(PetscBool cond) 310d382aafbSBarry Smith 311eca87e8dSBarry Smith Not Collective 312eca87e8dSBarry Smith 313d382aafbSBarry Smith Input Parameters: 314d382aafbSBarry Smith . cond - condition or expression 315d382aafbSBarry Smith 316e28ce29aSPatrick Sanan Notes: 317e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 318d382aafbSBarry Smith branch is unlikely. 319d382aafbSBarry Smith 320d382aafbSBarry Smith Level: advanced 321d382aafbSBarry Smith 322cf9c20a2SJed Brown .seealso: PetscUnlikelyDebug(), PetscLikely(), CHKERRQ 323d382aafbSBarry Smith M*/ 324d382aafbSBarry Smith 325d382aafbSBarry Smith /*MC 326d382aafbSBarry Smith PetscLikely - hints the compiler that the given condition is usually TRUE 327d382aafbSBarry Smith 328d382aafbSBarry Smith Synopsis: 329aaa7dc30SBarry Smith #include <petscsys.h> 33023072422SBarry Smith PetscBool PetscLikely(PetscBool cond) 331d382aafbSBarry Smith 332eca87e8dSBarry Smith Not Collective 333eca87e8dSBarry Smith 334d382aafbSBarry Smith Input Parameters: 335d382aafbSBarry Smith . cond - condition or expression 336d382aafbSBarry Smith 337e28ce29aSPatrick Sanan Notes: 338e28ce29aSPatrick Sanan This returns the same truth value, it is only a hint to compilers that the resulting 339d382aafbSBarry Smith branch is likely. 340d382aafbSBarry Smith 341d382aafbSBarry Smith Level: advanced 342d382aafbSBarry Smith 343d382aafbSBarry Smith .seealso: PetscUnlikely() 344d382aafbSBarry Smith M*/ 345d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT) 346d382aafbSBarry Smith # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 347d382aafbSBarry Smith # define PetscLikely(cond) __builtin_expect(!!(cond),1) 348d382aafbSBarry Smith #else 349cd3f4ce9SJed Brown # define PetscUnlikely(cond) (cond) 350cd3f4ce9SJed Brown # define PetscLikely(cond) (cond) 351d382aafbSBarry Smith #endif 352d382aafbSBarry Smith 353cf9c20a2SJed Brown /*MC 354cf9c20a2SJed Brown PetscUnlikelyDebug - hints the compiler that the given condition is usually FALSE, eliding the check in optimized mode 355cf9c20a2SJed Brown 356cf9c20a2SJed Brown Synopsis: 357cf9c20a2SJed Brown #include <petscsys.h> 358cf9c20a2SJed Brown PetscBool PetscUnlikelyDebug(PetscBool cond) 359cf9c20a2SJed Brown 360cf9c20a2SJed Brown Not Collective 361cf9c20a2SJed Brown 362cf9c20a2SJed Brown Input Parameters: 363cf9c20a2SJed Brown . cond - condition or expression 364cf9c20a2SJed Brown 365cf9c20a2SJed Brown Notes: 366cf9c20a2SJed Brown This returns the same truth value, it is only a hint to compilers that the resulting 367cf9c20a2SJed Brown branch is unlikely. When compiled in optimized mode, it always returns false. 368cf9c20a2SJed Brown 369cf9c20a2SJed Brown Level: advanced 370cf9c20a2SJed Brown 371cf9c20a2SJed Brown .seealso: PetscUnlikely(), CHKERRQ, SETERRQ 372cf9c20a2SJed Brown M*/ 373cf9c20a2SJed Brown #define PetscUnlikelyDebug(cond) (PetscDefined(USE_DEBUG) && PetscUnlikely(cond)) 374cf9c20a2SJed Brown 375d382aafbSBarry Smith /* 376d382aafbSBarry Smith Declare extern C stuff after including external header files 377d382aafbSBarry Smith */ 378d382aafbSBarry Smith 3796a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[]; 38070b3c8c7SBarry Smith 3818b49ba18SBarry Smith /* 382390e1bf2SBarry Smith Defines elementary mathematics functions and constants. 3838b49ba18SBarry Smith */ 3848b49ba18SBarry Smith #include <petscmath.h> 3858b49ba18SBarry Smith 3866a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[]; 387d382aafbSBarry Smith 388d382aafbSBarry Smith /*MC 3890298fd71SBarry Smith PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 390d382aafbSBarry Smith 391d382aafbSBarry Smith Level: beginner 392d382aafbSBarry Smith 393e28ce29aSPatrick Sanan Note: 394e28ce29aSPatrick Sanan Accepted by many PETSc functions to not set a parameter and instead use 395d382aafbSBarry Smith some default 396d382aafbSBarry Smith 397e28ce29aSPatrick Sanan Fortran Notes: 398e28ce29aSPatrick Sanan This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 399d382aafbSBarry Smith PETSC_NULL_DOUBLE_PRECISION etc 400d382aafbSBarry Smith 401e28ce29aSPatrick Sanan .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 402d382aafbSBarry Smith 403d382aafbSBarry Smith M*/ 4040298fd71SBarry Smith #define PETSC_IGNORE NULL 405d382aafbSBarry Smith 406c528d872SBarry Smith /* This is deprecated */ 407c528d872SBarry Smith #define PETSC_NULL NULL 408c528d872SBarry Smith 409d382aafbSBarry Smith /*MC 410557d4da8SBarry Smith PETSC_DECIDE - standard way of passing in integer or floating point parameter 411557d4da8SBarry Smith where you wish PETSc to use the default. 412557d4da8SBarry Smith 413557d4da8SBarry Smith Level: beginner 414557d4da8SBarry Smith 415e28ce29aSPatrick Sanan .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 416557d4da8SBarry Smith 417557d4da8SBarry Smith M*/ 418557d4da8SBarry Smith #define PETSC_DECIDE -1 419557d4da8SBarry Smith 420557d4da8SBarry Smith /*MC 421d382aafbSBarry Smith PETSC_DETERMINE - standard way of passing in integer or floating point parameter 422d382aafbSBarry Smith where you wish PETSc to compute the required value. 423d382aafbSBarry Smith 424d382aafbSBarry Smith Level: beginner 425d382aafbSBarry Smith 426e28ce29aSPatrick Sanan Developer Note: 427e28ce29aSPatrick Sanan I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 428557d4da8SBarry Smith some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 429557d4da8SBarry Smith 4300298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 431d382aafbSBarry Smith 432d382aafbSBarry Smith M*/ 433d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE 434d382aafbSBarry Smith 435d382aafbSBarry Smith /*MC 436557d4da8SBarry Smith PETSC_DEFAULT - standard way of passing in integer or floating point parameter 437557d4da8SBarry Smith where you wish PETSc to use the default. 438557d4da8SBarry Smith 439557d4da8SBarry Smith Level: beginner 440557d4da8SBarry Smith 441e28ce29aSPatrick Sanan Fortran Notes: 442e28ce29aSPatrick Sanan You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 443557d4da8SBarry Smith 4440298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 445557d4da8SBarry Smith 446557d4da8SBarry Smith M*/ 447557d4da8SBarry Smith #define PETSC_DEFAULT -2 448557d4da8SBarry Smith 449557d4da8SBarry Smith /*MC 450d382aafbSBarry Smith PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 451ea8fe74dSBarry Smith all the processes that PETSc knows about. 452d382aafbSBarry Smith 453d382aafbSBarry Smith Level: beginner 454d382aafbSBarry Smith 455e28ce29aSPatrick Sanan Notes: 456e28ce29aSPatrick Sanan By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 457d382aafbSBarry Smith run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 458d382aafbSBarry Smith communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 459a990b902SBarry Smith PetscInitialize(), but after MPI_Init() has been called. 460a990b902SBarry Smith 461a990b902SBarry Smith The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 462a990b902SBarry Smith is called because it may not have a valid value yet. 463d382aafbSBarry Smith 464d382aafbSBarry Smith .seealso: PETSC_COMM_SELF 465d382aafbSBarry Smith 466d382aafbSBarry Smith M*/ 467014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 468d382aafbSBarry Smith 469d382aafbSBarry Smith /*MC 470503cfb0cSBarry Smith PETSC_COMM_SELF - This is always MPI_COMM_SELF 471d382aafbSBarry Smith 472d382aafbSBarry Smith Level: beginner 473d382aafbSBarry Smith 474e28ce29aSPatrick Sanan Notes: 475e28ce29aSPatrick Sanan Do not USE/access or set this variable before PetscInitialize() has been called. 476a990b902SBarry Smith 477d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD 478d382aafbSBarry Smith 479d382aafbSBarry Smith M*/ 480d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF 481d382aafbSBarry Smith 4826de5d289SStefano Zampini /*MC 4836de5d289SStefano Zampini PETSC_MPI_THREAD_REQUIRED - the required threading support used if PETSc initializes 4846de5d289SStefano Zampini MPI with MPI_Init_thread. 4856de5d289SStefano Zampini 4866de5d289SStefano Zampini Level: beginner 4876de5d289SStefano Zampini 4886de5d289SStefano Zampini Notes: 4896de5d289SStefano Zampini By default PETSC_MPI_THREAD_REQUIRED equals MPI_THREAD_FUNNELED. 4906de5d289SStefano Zampini 4916de5d289SStefano Zampini .seealso: PetscInitialize() 4926de5d289SStefano Zampini 4936de5d289SStefano Zampini M*/ 4946de5d289SStefano Zampini PETSC_EXTERN PetscMPIInt PETSC_MPI_THREAD_REQUIRED; 4956de5d289SStefano Zampini 496d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI; 497*8ad20175SVaclav Hapla PETSC_EXTERN PetscBool PetscErrorHandlingInitialized; 498014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled; 499014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled; 5004cf1874eSKarl Rupp PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 50182f73ecaSAlejandro Lamas Daviña PETSC_EXTERN PetscBool PetscCUDASynchronize; 502d382aafbSBarry Smith 503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 506d382aafbSBarry Smith 5077381773fSBarry Smith #if defined(PETSC_HAVE_CUDA) 5087381773fSBarry Smith PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm); 5097381773fSBarry Smith #endif 5107381773fSBarry Smith 511540e20f2SPierre Jolivet #if defined(PETSC_HAVE_ELEMENTAL) 512540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitializePackage(void); 513540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalInitialized(PetscBool*); 514540e20f2SPierre Jolivet PETSC_EXTERN PetscErrorCode PetscElementalFinalizePackage(void); 515540e20f2SPierre Jolivet #endif 516540e20f2SPierre Jolivet 517d382aafbSBarry Smith /*MC 51895dccacaSBarry Smith PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 519d382aafbSBarry Smith 520eca87e8dSBarry Smith Synopsis: 521aaa7dc30SBarry Smith #include <petscsys.h> 522eca87e8dSBarry Smith PetscErrorCode PetscMalloc(size_t m,void **result) 523eca87e8dSBarry Smith 524eca87e8dSBarry Smith Not Collective 525eca87e8dSBarry Smith 526d382aafbSBarry Smith Input Parameter: 527d382aafbSBarry Smith . m - number of bytes to allocate 528d382aafbSBarry Smith 529d382aafbSBarry Smith Output Parameter: 530d382aafbSBarry Smith . result - memory allocated 531d382aafbSBarry Smith 532d382aafbSBarry Smith Level: beginner 533d382aafbSBarry Smith 53449d7da52SJed Brown Notes: 53549d7da52SJed Brown Memory is always allocated at least double aligned 536d382aafbSBarry Smith 53749d7da52SJed Brown It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 538d382aafbSBarry Smith 539d382aafbSBarry Smith .seealso: PetscFree(), PetscNew() 540d382aafbSBarry Smith 541d382aafbSBarry Smith M*/ 542071fcb05SBarry Smith #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 543d382aafbSBarry Smith 544d382aafbSBarry Smith /*MC 5453221ece2SMatthew G. Knepley PetscRealloc - Rellocates memory 5463221ece2SMatthew G. Knepley 5473221ece2SMatthew G. Knepley Synopsis: 5483221ece2SMatthew G. Knepley #include <petscsys.h> 5493221ece2SMatthew G. Knepley PetscErrorCode PetscRealloc(size_t m,void **result) 5503221ece2SMatthew G. Knepley 5513221ece2SMatthew G. Knepley Not Collective 5523221ece2SMatthew G. Knepley 5533221ece2SMatthew G. Knepley Input Parameters: 5543221ece2SMatthew G. Knepley + m - number of bytes to allocate 55592f119d6SBarry Smith - result - previous memory 5563221ece2SMatthew G. Knepley 5573221ece2SMatthew G. Knepley Output Parameter: 5583221ece2SMatthew G. Knepley . result - new memory allocated 5593221ece2SMatthew G. Knepley 5603221ece2SMatthew G. Knepley Level: developer 5613221ece2SMatthew G. Knepley 5623221ece2SMatthew G. Knepley Notes: 5633221ece2SMatthew G. Knepley Memory is always allocated at least double aligned 5643221ece2SMatthew G. Knepley 5653221ece2SMatthew G. Knepley .seealso: PetscMalloc(), PetscFree(), PetscNew() 5663221ece2SMatthew G. Knepley 5673221ece2SMatthew G. Knepley M*/ 5683221ece2SMatthew G. Knepley #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 5693221ece2SMatthew G. Knepley 5703221ece2SMatthew G. Knepley /*MC 571503cfb0cSBarry Smith PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 572d382aafbSBarry Smith 573d382aafbSBarry Smith Synopsis: 574aaa7dc30SBarry Smith #include <petscsys.h> 575d382aafbSBarry Smith void *PetscAddrAlign(void *addr) 576d382aafbSBarry Smith 577eca87e8dSBarry Smith Not Collective 578eca87e8dSBarry Smith 579eca87e8dSBarry Smith Input Parameters: 580eca87e8dSBarry Smith . addr - address to align (any pointer type) 581eca87e8dSBarry Smith 582d382aafbSBarry Smith Level: developer 583d382aafbSBarry Smith 584d382aafbSBarry Smith .seealso: PetscMallocAlign() 585d382aafbSBarry Smith 586d382aafbSBarry Smith M*/ 587d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 588d382aafbSBarry Smith 589d382aafbSBarry Smith /*MC 590785e854fSJed Brown PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 591d382aafbSBarry Smith 592eca87e8dSBarry Smith Synopsis: 593aaa7dc30SBarry Smith #include <petscsys.h> 594785e854fSJed Brown PetscErrorCode PetscMalloc1(size_t m1,type **r1) 595785e854fSJed Brown 596785e854fSJed Brown Not Collective 597785e854fSJed Brown 598785e854fSJed Brown Input Parameter: 599390e1bf2SBarry Smith . m1 - number of elements to allocate (may be zero) 600785e854fSJed Brown 601785e854fSJed Brown Output Parameter: 6021fe1b817SJunchao Zhang . r1 - memory allocated 603785e854fSJed Brown 604e28ce29aSPatrick Sanan Note: 605e28ce29aSPatrick Sanan This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 606390e1bf2SBarry Smith multiply the number of elements requested by the sizeof() the type. For example use 607390e1bf2SBarry Smith $ PetscInt *id; 608390e1bf2SBarry Smith $ PetscMalloc1(10,&id); 609390e1bf2SBarry Smith not 610390e1bf2SBarry Smith $ PetscInt *id; 611390e1bf2SBarry Smith $ PetscMalloc1(10*sizeof(PetscInt),&id); 612390e1bf2SBarry Smith 6131fe1b817SJunchao Zhang Does not zero the memory allocated, use PetscCalloc1() to obtain memory that has been zeroed. 614390e1bf2SBarry Smith 615390e1bf2SBarry Smith Level: beginner 616785e854fSJed Brown 6171795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 618785e854fSJed Brown 619785e854fSJed Brown M*/ 6202553b7ecSJed Brown #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 621785e854fSJed Brown 622785e854fSJed Brown /*MC 6231795a4d1SJed Brown PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 6241795a4d1SJed Brown 6251795a4d1SJed Brown Synopsis: 626aaa7dc30SBarry Smith #include <petscsys.h> 6271795a4d1SJed Brown PetscErrorCode PetscCalloc1(size_t m1,type **r1) 6281795a4d1SJed Brown 6291795a4d1SJed Brown Not Collective 6301795a4d1SJed Brown 6311795a4d1SJed Brown Input Parameter: 6321795a4d1SJed Brown . m1 - number of elements to allocate in 1st chunk (may be zero) 6331795a4d1SJed Brown 6341795a4d1SJed Brown Output Parameter: 6351fe1b817SJunchao Zhang . r1 - memory allocated 6361795a4d1SJed Brown 637e28ce29aSPatrick Sanan Notes: 638e28ce29aSPatrick Sanan See PetsMalloc1() for more details on usage. 639390e1bf2SBarry Smith 640390e1bf2SBarry Smith Level: beginner 6411795a4d1SJed Brown 6421795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 6431795a4d1SJed Brown 6441795a4d1SJed Brown M*/ 6452553b7ecSJed Brown #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 6461795a4d1SJed Brown 6471795a4d1SJed Brown /*MC 648dcca6d9dSJed Brown PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 649d382aafbSBarry Smith 650eca87e8dSBarry Smith Synopsis: 651aaa7dc30SBarry Smith #include <petscsys.h> 652dcca6d9dSJed Brown PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 653eca87e8dSBarry Smith 654eca87e8dSBarry Smith Not Collective 655eca87e8dSBarry Smith 656d382aafbSBarry Smith Input Parameter: 657d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 658dcca6d9dSJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 659d382aafbSBarry Smith 660d382aafbSBarry Smith Output Parameter: 661d382aafbSBarry Smith + r1 - memory allocated in first chunk 662d382aafbSBarry Smith - r2 - memory allocated in second chunk 663d382aafbSBarry Smith 664d382aafbSBarry Smith Level: developer 665d382aafbSBarry Smith 6661795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 667d382aafbSBarry Smith 668d382aafbSBarry Smith M*/ 6692553b7ecSJed Brown #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 670d382aafbSBarry Smith 671d382aafbSBarry Smith /*MC 6721795a4d1SJed Brown PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 673d382aafbSBarry Smith 674eca87e8dSBarry Smith Synopsis: 675aaa7dc30SBarry Smith #include <petscsys.h> 6761795a4d1SJed Brown PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 677eca87e8dSBarry Smith 678eca87e8dSBarry Smith Not Collective 679eca87e8dSBarry Smith 680d382aafbSBarry Smith Input Parameter: 681d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 6821795a4d1SJed Brown - m2 - number of elements to allocate in 2nd chunk (may be zero) 6831795a4d1SJed Brown 6841795a4d1SJed Brown Output Parameter: 6851795a4d1SJed Brown + r1 - memory allocated in first chunk 6861795a4d1SJed Brown - r2 - memory allocated in second chunk 6871795a4d1SJed Brown 6881795a4d1SJed Brown Level: developer 6891795a4d1SJed Brown 6901795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 6911795a4d1SJed Brown 6921795a4d1SJed Brown M*/ 6932553b7ecSJed Brown #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 6941795a4d1SJed Brown 6951795a4d1SJed Brown /*MC 696dcca6d9dSJed Brown PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 697d382aafbSBarry Smith 698d382aafbSBarry Smith Synopsis: 699aaa7dc30SBarry Smith #include <petscsys.h> 700dcca6d9dSJed Brown PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 701d382aafbSBarry Smith 702d382aafbSBarry Smith Not Collective 703d382aafbSBarry Smith 704d382aafbSBarry Smith Input Parameter: 705d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 706d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 707dcca6d9dSJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 708d382aafbSBarry Smith 709d382aafbSBarry Smith Output Parameter: 710d382aafbSBarry Smith + r1 - memory allocated in first chunk 711d382aafbSBarry Smith . r2 - memory allocated in second chunk 712d382aafbSBarry Smith - r3 - memory allocated in third chunk 713d382aafbSBarry Smith 714d382aafbSBarry Smith Level: developer 715d382aafbSBarry Smith 7161795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 717d382aafbSBarry Smith 718d382aafbSBarry Smith M*/ 7192553b7ecSJed Brown #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 720d382aafbSBarry Smith 721d382aafbSBarry Smith /*MC 7221795a4d1SJed Brown PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 723d382aafbSBarry Smith 724eca87e8dSBarry Smith Synopsis: 725aaa7dc30SBarry Smith #include <petscsys.h> 7261795a4d1SJed Brown PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 727eca87e8dSBarry Smith 728eca87e8dSBarry Smith Not Collective 729eca87e8dSBarry Smith 730d382aafbSBarry Smith Input Parameter: 731d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 732d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 7331795a4d1SJed Brown - m3 - number of elements to allocate in 3rd chunk (may be zero) 7341795a4d1SJed Brown 7351795a4d1SJed Brown Output Parameter: 7361795a4d1SJed Brown + r1 - memory allocated in first chunk 7371795a4d1SJed Brown . r2 - memory allocated in second chunk 7381795a4d1SJed Brown - r3 - memory allocated in third chunk 7391795a4d1SJed Brown 7401795a4d1SJed Brown Level: developer 7411795a4d1SJed Brown 7421795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 7431795a4d1SJed Brown 7441795a4d1SJed Brown M*/ 7452553b7ecSJed Brown #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 7461795a4d1SJed Brown 7471795a4d1SJed Brown /*MC 748dcca6d9dSJed Brown PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 749d382aafbSBarry Smith 750d382aafbSBarry Smith Synopsis: 751aaa7dc30SBarry Smith #include <petscsys.h> 752dcca6d9dSJed Brown PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 753d382aafbSBarry Smith 754d382aafbSBarry Smith Not Collective 755d382aafbSBarry Smith 756d382aafbSBarry Smith Input Parameter: 757d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 758d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 759d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 760dcca6d9dSJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 761d382aafbSBarry Smith 762d382aafbSBarry Smith Output Parameter: 763d382aafbSBarry Smith + r1 - memory allocated in first chunk 764d382aafbSBarry Smith . r2 - memory allocated in second chunk 765d382aafbSBarry Smith . r3 - memory allocated in third chunk 766d382aafbSBarry Smith - r4 - memory allocated in fourth chunk 767d382aafbSBarry Smith 768d382aafbSBarry Smith Level: developer 769d382aafbSBarry Smith 7701795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 771d382aafbSBarry Smith 772d382aafbSBarry Smith M*/ 7732553b7ecSJed Brown #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 774d382aafbSBarry Smith 775d382aafbSBarry Smith /*MC 7761795a4d1SJed Brown PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 777d382aafbSBarry Smith 778eca87e8dSBarry Smith Synopsis: 779aaa7dc30SBarry Smith #include <petscsys.h> 7801795a4d1SJed Brown PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 781eca87e8dSBarry Smith 782eca87e8dSBarry Smith Not Collective 783eca87e8dSBarry Smith 784e28ce29aSPatrick Sanan Input Parameters: 785d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 786d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 787d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 7881795a4d1SJed Brown - m4 - number of elements to allocate in 4th chunk (may be zero) 7891795a4d1SJed Brown 790e28ce29aSPatrick Sanan Output Parameters: 7911795a4d1SJed Brown + r1 - memory allocated in first chunk 7921795a4d1SJed Brown . r2 - memory allocated in second chunk 7931795a4d1SJed Brown . r3 - memory allocated in third chunk 7941795a4d1SJed Brown - r4 - memory allocated in fourth chunk 7951795a4d1SJed Brown 7961795a4d1SJed Brown Level: developer 7971795a4d1SJed Brown 7981795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 7991795a4d1SJed Brown 8001795a4d1SJed Brown M*/ 8012553b7ecSJed Brown #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 8021795a4d1SJed Brown 8031795a4d1SJed Brown /*MC 804dcca6d9dSJed Brown PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 805d382aafbSBarry Smith 806d382aafbSBarry Smith Synopsis: 807aaa7dc30SBarry Smith #include <petscsys.h> 808dcca6d9dSJed Brown PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 809d382aafbSBarry Smith 810d382aafbSBarry Smith Not Collective 811d382aafbSBarry Smith 812e28ce29aSPatrick Sanan Input Parameters: 813d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 814d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 815d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 816d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 817dcca6d9dSJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 818d382aafbSBarry Smith 819e28ce29aSPatrick Sanan Output Parameters: 820d382aafbSBarry Smith + r1 - memory allocated in first chunk 821d382aafbSBarry Smith . r2 - memory allocated in second chunk 822d382aafbSBarry Smith . r3 - memory allocated in third chunk 823d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 824d382aafbSBarry Smith - r5 - memory allocated in fifth chunk 825d382aafbSBarry Smith 826d382aafbSBarry Smith Level: developer 827d382aafbSBarry Smith 8281795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 829d382aafbSBarry Smith 830d382aafbSBarry Smith M*/ 8312553b7ecSJed Brown #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 832d382aafbSBarry Smith 833d382aafbSBarry Smith /*MC 8341795a4d1SJed Brown PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 835d382aafbSBarry Smith 836eca87e8dSBarry Smith Synopsis: 837aaa7dc30SBarry Smith #include <petscsys.h> 8381795a4d1SJed Brown PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 839eca87e8dSBarry Smith 840eca87e8dSBarry Smith Not Collective 841eca87e8dSBarry Smith 842e28ce29aSPatrick Sanan Input Parameters: 843d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 844d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 845d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 846d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 8471795a4d1SJed Brown - m5 - number of elements to allocate in 5th chunk (may be zero) 8481795a4d1SJed Brown 849e28ce29aSPatrick Sanan Output Parameters: 8501795a4d1SJed Brown + r1 - memory allocated in first chunk 8511795a4d1SJed Brown . r2 - memory allocated in second chunk 8521795a4d1SJed Brown . r3 - memory allocated in third chunk 8531795a4d1SJed Brown . r4 - memory allocated in fourth chunk 8541795a4d1SJed Brown - r5 - memory allocated in fifth chunk 8551795a4d1SJed Brown 8561795a4d1SJed Brown Level: developer 8571795a4d1SJed Brown 8581795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 8591795a4d1SJed Brown 8601795a4d1SJed Brown M*/ 8612553b7ecSJed Brown #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 862d382aafbSBarry Smith 863d382aafbSBarry Smith /*MC 864dcca6d9dSJed Brown PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 865d382aafbSBarry Smith 866d382aafbSBarry Smith Synopsis: 867aaa7dc30SBarry Smith #include <petscsys.h> 868dcca6d9dSJed Brown PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 869d382aafbSBarry Smith 870d382aafbSBarry Smith Not Collective 871d382aafbSBarry Smith 872e28ce29aSPatrick Sanan Input Parameters: 873d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 874d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 875d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 876d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 877d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 878dcca6d9dSJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 879d382aafbSBarry Smith 880e28ce29aSPatrick Sanan Output Parameteasr: 881d382aafbSBarry Smith + r1 - memory allocated in first chunk 882d382aafbSBarry Smith . r2 - memory allocated in second chunk 883d382aafbSBarry Smith . r3 - memory allocated in third chunk 884d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 885d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 886d382aafbSBarry Smith - r6 - memory allocated in sixth chunk 887d382aafbSBarry Smith 888d382aafbSBarry Smith Level: developer 889d382aafbSBarry Smith 8901795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 891d382aafbSBarry Smith 892d382aafbSBarry Smith M*/ 8932553b7ecSJed Brown #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 894d382aafbSBarry Smith 895d382aafbSBarry Smith /*MC 8961795a4d1SJed Brown PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 897d382aafbSBarry Smith 898eca87e8dSBarry Smith Synopsis: 899aaa7dc30SBarry Smith #include <petscsys.h> 9001795a4d1SJed Brown PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 901eca87e8dSBarry Smith 902eca87e8dSBarry Smith Not Collective 903eca87e8dSBarry Smith 904e28ce29aSPatrick Sanan Input Parameters: 905d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 906d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 907d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 908d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 909d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 9101795a4d1SJed Brown - m6 - number of elements to allocate in 6th chunk (may be zero) 9111795a4d1SJed Brown 912e28ce29aSPatrick Sanan Output Parameters: 9131795a4d1SJed Brown + r1 - memory allocated in first chunk 9141795a4d1SJed Brown . r2 - memory allocated in second chunk 9151795a4d1SJed Brown . r3 - memory allocated in third chunk 9161795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9171795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9181795a4d1SJed Brown - r6 - memory allocated in sixth chunk 9191795a4d1SJed Brown 9201795a4d1SJed Brown Level: developer 9211795a4d1SJed Brown 9221795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 9231795a4d1SJed Brown 9241795a4d1SJed Brown M*/ 9252553b7ecSJed Brown #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 9261795a4d1SJed Brown 9271795a4d1SJed Brown /*MC 928dcca6d9dSJed Brown PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 929d382aafbSBarry Smith 930d382aafbSBarry Smith Synopsis: 931aaa7dc30SBarry Smith #include <petscsys.h> 932dcca6d9dSJed Brown PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 933d382aafbSBarry Smith 934d382aafbSBarry Smith Not Collective 935d382aafbSBarry Smith 936e28ce29aSPatrick Sanan Input Parameters: 937d382aafbSBarry Smith + m1 - number of elements to allocate in 1st chunk (may be zero) 938d382aafbSBarry Smith . m2 - number of elements to allocate in 2nd chunk (may be zero) 939d382aafbSBarry Smith . m3 - number of elements to allocate in 3rd chunk (may be zero) 940d382aafbSBarry Smith . m4 - number of elements to allocate in 4th chunk (may be zero) 941d382aafbSBarry Smith . m5 - number of elements to allocate in 5th chunk (may be zero) 942d382aafbSBarry Smith . m6 - number of elements to allocate in 6th chunk (may be zero) 943dcca6d9dSJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 944d382aafbSBarry Smith 945e28ce29aSPatrick Sanan Output Parameters: 946d382aafbSBarry Smith + r1 - memory allocated in first chunk 947d382aafbSBarry Smith . r2 - memory allocated in second chunk 948d382aafbSBarry Smith . r3 - memory allocated in third chunk 949d382aafbSBarry Smith . r4 - memory allocated in fourth chunk 950d382aafbSBarry Smith . r5 - memory allocated in fifth chunk 951d382aafbSBarry Smith . r6 - memory allocated in sixth chunk 952eca87e8dSBarry Smith - r7 - memory allocated in seventh chunk 953d382aafbSBarry Smith 954d382aafbSBarry Smith Level: developer 955d382aafbSBarry Smith 9561795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 957d382aafbSBarry Smith 958d382aafbSBarry Smith M*/ 9592553b7ecSJed Brown #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 960d382aafbSBarry Smith 961d382aafbSBarry Smith /*MC 9621795a4d1SJed Brown PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 9631795a4d1SJed Brown 9641795a4d1SJed Brown Synopsis: 965aaa7dc30SBarry Smith #include <petscsys.h> 9661795a4d1SJed Brown PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 9671795a4d1SJed Brown 9681795a4d1SJed Brown Not Collective 9691795a4d1SJed Brown 970e28ce29aSPatrick Sanan Input Parameters: 9711795a4d1SJed Brown + m1 - number of elements to allocate in 1st chunk (may be zero) 9721795a4d1SJed Brown . m2 - number of elements to allocate in 2nd chunk (may be zero) 9731795a4d1SJed Brown . m3 - number of elements to allocate in 3rd chunk (may be zero) 9741795a4d1SJed Brown . m4 - number of elements to allocate in 4th chunk (may be zero) 9751795a4d1SJed Brown . m5 - number of elements to allocate in 5th chunk (may be zero) 9761795a4d1SJed Brown . m6 - number of elements to allocate in 6th chunk (may be zero) 9771795a4d1SJed Brown - m7 - number of elements to allocate in 7th chunk (may be zero) 9781795a4d1SJed Brown 979e28ce29aSPatrick Sanan Output Parameters: 9801795a4d1SJed Brown + r1 - memory allocated in first chunk 9811795a4d1SJed Brown . r2 - memory allocated in second chunk 9821795a4d1SJed Brown . r3 - memory allocated in third chunk 9831795a4d1SJed Brown . r4 - memory allocated in fourth chunk 9841795a4d1SJed Brown . r5 - memory allocated in fifth chunk 9851795a4d1SJed Brown . r6 - memory allocated in sixth chunk 9861795a4d1SJed Brown - r7 - memory allocated in seventh chunk 9871795a4d1SJed Brown 9881795a4d1SJed Brown Level: developer 9891795a4d1SJed Brown 9901795a4d1SJed Brown .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 9911795a4d1SJed Brown 9921795a4d1SJed Brown M*/ 9932553b7ecSJed Brown #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 9941795a4d1SJed Brown 9951795a4d1SJed Brown /*MC 996503cfb0cSBarry Smith PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 997d382aafbSBarry Smith 998eca87e8dSBarry Smith Synopsis: 999aaa7dc30SBarry Smith #include <petscsys.h> 1000b00a9115SJed Brown PetscErrorCode PetscNew(type **result) 1001eca87e8dSBarry Smith 1002eca87e8dSBarry Smith Not Collective 1003eca87e8dSBarry Smith 1004d382aafbSBarry Smith Output Parameter: 1005b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1006d382aafbSBarry Smith 1007d382aafbSBarry Smith Level: beginner 1008d382aafbSBarry Smith 1009390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 1010d382aafbSBarry Smith 1011d382aafbSBarry Smith M*/ 1012b00a9115SJed Brown #define PetscNew(b) PetscCalloc1(1,(b)) 1013ad0619ddSBarry Smith 1014ad0619ddSBarry Smith /*MC 1015b00a9115SJed Brown PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 1016ad0619ddSBarry Smith with the given object using PetscLogObjectMemory(). 1017ad0619ddSBarry Smith 1018ad0619ddSBarry Smith Synopsis: 1019aaa7dc30SBarry Smith #include <petscsys.h> 1020b00a9115SJed Brown PetscErrorCode PetscNewLog(PetscObject obj,type **result) 1021ad0619ddSBarry Smith 1022ad0619ddSBarry Smith Not Collective 1023ad0619ddSBarry Smith 1024ad0619ddSBarry Smith Input Parameter: 1025b00a9115SJed Brown . obj - object memory is logged to 1026ad0619ddSBarry Smith 1027ad0619ddSBarry Smith Output Parameter: 1028b00a9115SJed Brown . result - memory allocated, sized to match pointer type 1029ad0619ddSBarry Smith 1030ad0619ddSBarry Smith Level: developer 1031ad0619ddSBarry Smith 1032390e1bf2SBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 1033ad0619ddSBarry Smith 1034ad0619ddSBarry Smith M*/ 1035d12f57a0SLisandro Dalcin #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 1036d382aafbSBarry Smith 1037d382aafbSBarry Smith /*MC 1038d382aafbSBarry Smith PetscFree - Frees memory 1039d382aafbSBarry Smith 1040eca87e8dSBarry Smith Synopsis: 1041aaa7dc30SBarry Smith #include <petscsys.h> 1042eca87e8dSBarry Smith PetscErrorCode PetscFree(void *memory) 1043eca87e8dSBarry Smith 1044eca87e8dSBarry Smith Not Collective 1045eca87e8dSBarry Smith 1046d382aafbSBarry Smith Input Parameter: 10477f4976b7SJacob Faibussowitsch . memory - memory to free (the pointer is ALWAYS set to NULL upon success) 1048d382aafbSBarry Smith 1049d382aafbSBarry Smith Level: beginner 1050d382aafbSBarry Smith 105149d7da52SJed Brown Notes: 1052390e1bf2SBarry Smith Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 1053390e1bf2SBarry Smith 105449d7da52SJed Brown It is safe to call PetscFree() on a NULL pointer. 1055d382aafbSBarry Smith 1056390e1bf2SBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 1057d382aafbSBarry Smith 1058d382aafbSBarry Smith M*/ 1059ffc31a0eSLisandro Dalcin #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = NULL,0)) 1060d382aafbSBarry Smith 1061d382aafbSBarry Smith /*MC 1062d382aafbSBarry Smith PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 1063d382aafbSBarry Smith 1064eca87e8dSBarry Smith Synopsis: 1065aaa7dc30SBarry Smith #include <petscsys.h> 1066eca87e8dSBarry Smith PetscErrorCode PetscFree2(void *memory1,void *memory2) 1067eca87e8dSBarry Smith 1068eca87e8dSBarry Smith Not Collective 1069eca87e8dSBarry Smith 1070e28ce29aSPatrick Sanan Input Parameters: 1071d382aafbSBarry Smith + memory1 - memory to free 1072d382aafbSBarry Smith - memory2 - 2nd memory to free 1073d382aafbSBarry Smith 1074d382aafbSBarry Smith Level: developer 1075d382aafbSBarry Smith 107695452b02SPatrick Sanan Notes: 107795452b02SPatrick Sanan Memory must have been obtained with PetscMalloc2() 1078d382aafbSBarry Smith 1079d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 1080d382aafbSBarry Smith 1081d382aafbSBarry Smith M*/ 1082ba282f50SJed Brown #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 1083d382aafbSBarry Smith 1084d382aafbSBarry Smith /*MC 1085d382aafbSBarry Smith PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 1086d382aafbSBarry Smith 1087eca87e8dSBarry Smith Synopsis: 1088aaa7dc30SBarry Smith #include <petscsys.h> 1089eca87e8dSBarry Smith PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1090eca87e8dSBarry Smith 1091eca87e8dSBarry Smith Not Collective 1092eca87e8dSBarry Smith 1093e28ce29aSPatrick Sanan Input Parameters: 1094d382aafbSBarry Smith + memory1 - memory to free 1095d382aafbSBarry Smith . memory2 - 2nd memory to free 1096d382aafbSBarry Smith - memory3 - 3rd memory to free 1097d382aafbSBarry Smith 1098d382aafbSBarry Smith Level: developer 1099d382aafbSBarry Smith 110095452b02SPatrick Sanan Notes: 110195452b02SPatrick Sanan Memory must have been obtained with PetscMalloc3() 1102d382aafbSBarry Smith 1103d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1104d382aafbSBarry Smith 1105d382aafbSBarry Smith M*/ 1106ba282f50SJed Brown #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1107d382aafbSBarry Smith 1108d382aafbSBarry Smith /*MC 1109d382aafbSBarry Smith PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1110d382aafbSBarry Smith 1111eca87e8dSBarry Smith Synopsis: 1112aaa7dc30SBarry Smith #include <petscsys.h> 1113eca87e8dSBarry Smith PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1114eca87e8dSBarry Smith 1115eca87e8dSBarry Smith Not Collective 1116eca87e8dSBarry Smith 1117e28ce29aSPatrick Sanan Input Parameters: 1118d382aafbSBarry Smith + m1 - memory to free 1119d382aafbSBarry Smith . m2 - 2nd memory to free 1120d382aafbSBarry Smith . m3 - 3rd memory to free 1121d382aafbSBarry Smith - m4 - 4th memory to free 1122d382aafbSBarry Smith 1123d382aafbSBarry Smith Level: developer 1124d382aafbSBarry Smith 112595452b02SPatrick Sanan Notes: 112695452b02SPatrick Sanan Memory must have been obtained with PetscMalloc4() 1127d382aafbSBarry Smith 1128d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1129d382aafbSBarry Smith 1130d382aafbSBarry Smith M*/ 1131ba282f50SJed Brown #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1132d382aafbSBarry Smith 1133d382aafbSBarry Smith /*MC 1134d382aafbSBarry Smith PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1135d382aafbSBarry Smith 1136eca87e8dSBarry Smith Synopsis: 1137aaa7dc30SBarry Smith #include <petscsys.h> 1138eca87e8dSBarry Smith PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1139eca87e8dSBarry Smith 1140eca87e8dSBarry Smith Not Collective 1141eca87e8dSBarry Smith 1142e28ce29aSPatrick Sanan Input Parameters: 1143d382aafbSBarry Smith + m1 - memory to free 1144d382aafbSBarry Smith . m2 - 2nd memory to free 1145d382aafbSBarry Smith . m3 - 3rd memory to free 1146d382aafbSBarry Smith . m4 - 4th memory to free 1147d382aafbSBarry Smith - m5 - 5th memory to free 1148d382aafbSBarry Smith 1149d382aafbSBarry Smith Level: developer 1150d382aafbSBarry Smith 115195452b02SPatrick Sanan Notes: 115295452b02SPatrick Sanan Memory must have been obtained with PetscMalloc5() 1153d382aafbSBarry Smith 1154d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1155d382aafbSBarry Smith 1156d382aafbSBarry Smith M*/ 1157ba282f50SJed Brown #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1158d382aafbSBarry Smith 1159d382aafbSBarry Smith /*MC 1160d382aafbSBarry Smith PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1161d382aafbSBarry Smith 1162eca87e8dSBarry Smith Synopsis: 1163aaa7dc30SBarry Smith #include <petscsys.h> 1164eca87e8dSBarry Smith PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1165eca87e8dSBarry Smith 1166eca87e8dSBarry Smith Not Collective 1167eca87e8dSBarry Smith 1168e28ce29aSPatrick Sanan Input Parameters: 1169d382aafbSBarry Smith + m1 - memory to free 1170d382aafbSBarry Smith . m2 - 2nd memory to free 1171d382aafbSBarry Smith . m3 - 3rd memory to free 1172d382aafbSBarry Smith . m4 - 4th memory to free 1173d382aafbSBarry Smith . m5 - 5th memory to free 1174d382aafbSBarry Smith - m6 - 6th memory to free 1175d382aafbSBarry Smith 1176d382aafbSBarry Smith 1177d382aafbSBarry Smith Level: developer 1178d382aafbSBarry Smith 117995452b02SPatrick Sanan Notes: 118095452b02SPatrick Sanan Memory must have been obtained with PetscMalloc6() 1181d382aafbSBarry Smith 1182d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1183d382aafbSBarry Smith 1184d382aafbSBarry Smith M*/ 1185ba282f50SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1186d382aafbSBarry Smith 1187d382aafbSBarry Smith /*MC 1188d382aafbSBarry Smith PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1189d382aafbSBarry Smith 1190eca87e8dSBarry Smith Synopsis: 1191aaa7dc30SBarry Smith #include <petscsys.h> 1192eca87e8dSBarry Smith PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1193eca87e8dSBarry Smith 1194eca87e8dSBarry Smith Not Collective 1195eca87e8dSBarry Smith 1196e28ce29aSPatrick Sanan Input Parameters: 1197d382aafbSBarry Smith + m1 - memory to free 1198d382aafbSBarry Smith . m2 - 2nd memory to free 1199d382aafbSBarry Smith . m3 - 3rd memory to free 1200d382aafbSBarry Smith . m4 - 4th memory to free 1201d382aafbSBarry Smith . m5 - 5th memory to free 1202d382aafbSBarry Smith . m6 - 6th memory to free 1203d382aafbSBarry Smith - m7 - 7th memory to free 1204d382aafbSBarry Smith 1205d382aafbSBarry Smith 1206d382aafbSBarry Smith Level: developer 1207d382aafbSBarry Smith 120895452b02SPatrick Sanan Notes: 120995452b02SPatrick Sanan Memory must have been obtained with PetscMalloc7() 1210d382aafbSBarry Smith 1211d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1212d382aafbSBarry Smith PetscMalloc7() 1213d382aafbSBarry Smith 1214d382aafbSBarry Smith M*/ 1215ba282f50SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1216d382aafbSBarry Smith 1217ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1218ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1219071fcb05SBarry Smith PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1220efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 12213221ece2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1222ba282f50SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 122392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1224014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1225d382aafbSBarry Smith 1226d382aafbSBarry Smith /* 1227c1706be6SHong Zhang Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1228c1706be6SHong Zhang */ 1229c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1230c1706be6SHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 123131f06eaaSHong Zhang #if defined(PETSC_HAVE_CUDA) 123231f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocSetCUDAHost(void); 123331f06eaaSHong Zhang PETSC_EXTERN PetscErrorCode PetscMallocResetCUDAHost(void); 123431f06eaaSHong Zhang #endif 1235c1706be6SHong Zhang 1236a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 123736763ca0SBas van 't Hof #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1238a5057860SBarry Smith 1239a5057860SBarry Smith /* 124066d669d6SBarry Smith Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1241d382aafbSBarry Smith */ 1242014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 124392f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1244014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1245014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1246e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1247e3ed9ee7SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 124892f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 124992f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1250efca3c55SSatish Balay PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 125192f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 125292f119d6SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1253d382aafbSBarry Smith 12546a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[]; 1255014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 12588e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1259d382aafbSBarry Smith 1260d382aafbSBarry Smith /* 1261d382aafbSBarry Smith Basic memory and string operations. These are usually simple wrappers 1262d382aafbSBarry Smith around the basic Unix system calls, but a few of them have additional 1263d382aafbSBarry Smith functionality and/or error checking. 1264d382aafbSBarry Smith */ 1265014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1267014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1268d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1269014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1270014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1271014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1272014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1273014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1274014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1275014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1276a126751eSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1278014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 12802f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1281014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1282014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1283014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1284014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 12852c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 128847340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 12896fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 12906991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 12916991f827SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1292014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1293d382aafbSBarry Smith 1294573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1295573b0fb4SBarry Smith 1296014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1297014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1298014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1299d382aafbSBarry Smith 1300e94e781bSJacob Faibussowitsch PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1301a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1302a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1303a53986e1SJed Brown 1304d382aafbSBarry Smith /* 1305d382aafbSBarry Smith These are MPI operations for MPI_Allreduce() etc 1306d382aafbSBarry Smith */ 1307367daffbSBarry Smith PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1308570b7f6dSBarry Smith #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1309014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM; 13102414b3c7SJed Brown #else 13112414b3c7SJed Brown #define MPIU_SUM MPI_SUM 13122414b3c7SJed Brown #endif 1313570b7f6dSBarry Smith #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1314014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX; 1315014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN; 1316d9822059SBarry Smith #else 1317d9822059SBarry Smith #define MPIU_MAX MPI_MAX 1318d9822059SBarry Smith #define MPIU_MIN MPI_MIN 1319d9822059SBarry Smith #endif 1320014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1321d382aafbSBarry Smith 1322014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1323014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1324eb3f98d2SBarry Smith 132595c0884eSLisandro Dalcin PETSC_EXTERN const char *const PetscFileModes[]; 1326d6a4318aSJed Brown 1327639ff905SBarry Smith /* 1328639ff905SBarry Smith Defines PETSc error handling. 1329639ff905SBarry Smith */ 1330639ff905SBarry Smith #include <petscerror.h> 1331d382aafbSBarry Smith 13320700a824SBarry Smith #define PETSC_SMALLEST_CLASSID 1211211 1333014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1334014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1335014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 133681256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectGetId(PetscObject,PetscObjectId*); 133781256985SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscObjectCompareId(PetscObject,PetscObjectId,PetscBool*); 133881256985SMatthew G. Knepley 1339d382aafbSBarry Smith 1340d382aafbSBarry Smith /* 1341d382aafbSBarry Smith Routines that get memory usage information from the OS 1342d382aafbSBarry Smith */ 1343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1346b44d5720SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1347d382aafbSBarry Smith 1348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1349d382aafbSBarry Smith 1350d382aafbSBarry Smith /* 1351d382aafbSBarry Smith Initialization of PETSc 1352d382aafbSBarry Smith */ 1353014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1354014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1355014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1356014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1357014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1358014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1359014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1360014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1361014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1362014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1363d382aafbSBarry Smith 1364014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void); 1365607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1366d382aafbSBarry Smith 1367014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1368014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1369014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1370014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1371d382aafbSBarry Smith 1372a50e088cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscMonitorCompare(PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscErrorCode (*)(void),void *,PetscErrorCode (*)(void**),PetscBool *); 1373a50e088cSMatthew G. Knepley 1374a50e088cSMatthew G. Knepley 1375d382aafbSBarry Smith /* 1376d382aafbSBarry Smith These are so that in extern C code we can caste function pointers to non-extern C 13772981ebdbSBarry Smith function pointers. Since the regular C++ code expects its function pointers to be C++ 1378d382aafbSBarry Smith */ 1379638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1380638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1381638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1382d382aafbSBarry Smith 1383d382aafbSBarry Smith /* 1384d382aafbSBarry Smith Functions that can act on any PETSc object. 1385d382aafbSBarry Smith */ 1386014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1387014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1388014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1389014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1390014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1391014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1392014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1393014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1394014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1395014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1396014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1397014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1398014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1399014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1400014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt*); 1401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1403014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject*); 1404bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1405bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1406014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1407014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 14080eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 14090eb63584SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1410014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt*); 1411d382aafbSBarry Smith 1412665c2dedSJed Brown #include <petscviewertypes.h> 1413639ff905SBarry Smith #include <petscoptions.h> 1414639ff905SBarry Smith 14150633abcbSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 14160633abcbSJed Brown 1417639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1418c5e4d11fSDmitry Karpeev PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1419dae58748SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1420639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 14210005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 14220005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1423014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1424014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1425014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1427014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1429014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1430685405a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 14334099cc6bSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1435b9e7e5c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1438d382aafbSBarry Smith 1439e04113cfSBarry Smith #if defined(PETSC_HAVE_SAWS) 14407aab2a10SBarry Smith PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1441e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1442e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1443e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1444e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1445e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1446e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1447e04113cfSBarry Smith PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1448e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1449e04113cfSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 145015681b3cSBarry Smith 1451ec7429eaSBarry Smith #else 14527aab2a10SBarry Smith #define PetscSAWsBlock() 0 1453e04113cfSBarry Smith #define PetscObjectSAWsViewOff(obj) 0 1454e04113cfSBarry Smith #define PetscObjectSAWsSetBlock(obj,flg) 0 1455e04113cfSBarry Smith #define PetscObjectSAWsBlock(obj) 0 1456e04113cfSBarry Smith #define PetscObjectSAWsGrantAccess(obj) 0 1457e04113cfSBarry Smith #define PetscObjectSAWsTakeAccess(obj) 0 1458e04113cfSBarry Smith #define PetscStackViewSAWs() 0 1459e04113cfSBarry Smith #define PetscStackSAWsViewOff() 0 1460e04113cfSBarry Smith #define PetscStackSAWsTakeAccess() 1461e04113cfSBarry Smith #define PetscStackSAWsGrantAccess() 146215681b3cSBarry Smith 1463ec7429eaSBarry Smith #endif 1464b90c6cbeSBarry Smith 146582b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 146682b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 146782b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 14687d5d4d99SBarry Smith 14695fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG) 1470a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 14715fe58b6fSBarry Smith #endif 14727eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1473a64a8e02SBarry Smith 1474140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1475140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1476140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1477140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1478140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1479140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1480d382aafbSBarry Smith 1481d382aafbSBarry Smith /* 1482503cfb0cSBarry Smith Dynamic library lists. Lists of names of routines in objects or in dynamic 1483d382aafbSBarry Smith link libraries that will be loaded as needed. 1484d382aafbSBarry Smith */ 1485a240a19fSJed Brown 1486a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1487a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1488140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 14891c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 14901c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 149144ef3d73SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1492140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1493140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1494140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1495d382aafbSBarry Smith 1496014dd563SJed Brown PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1497014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1498014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1499014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1500014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1502014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1504d382aafbSBarry Smith 1505d382aafbSBarry Smith /* 1506d382aafbSBarry Smith Useful utility routines 1507d382aafbSBarry Smith */ 1508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1510d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode PetscSplitOwnershipEqual(MPI_Comm,PetscInt*,PetscInt*); 1511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1513014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1514014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 15156ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[],PetscInt[]); 15166ba4152bSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[],PetscReal[]); 1517d382aafbSBarry Smith 151864ac3b0dSPatrick Sanan /*MC 1519ace3abfcSBarry Smith PetscNot - negates a logical type value and returns result as a PetscBool 1520503cfb0cSBarry Smith 1521e28ce29aSPatrick Sanan Notes: 1522e28ce29aSPatrick Sanan This is useful in cases like 1523503cfb0cSBarry Smith $ int *a; 1524ace3abfcSBarry Smith $ PetscBool flag = PetscNot(a) 15251cc8b206SBarry Smith where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 152664ac3b0dSPatrick Sanan 152764ac3b0dSPatrick Sanan Level: beginner 152864ac3b0dSPatrick Sanan 152964ac3b0dSPatrick Sanan .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 153064ac3b0dSPatrick Sanan M*/ 1531d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1532503cfb0cSBarry Smith 1533d382aafbSBarry Smith /*MC 1534d382aafbSBarry Smith PetscHelpPrintf - Prints help messages. 1535d382aafbSBarry Smith 1536d382aafbSBarry Smith Synopsis: 1537aaa7dc30SBarry Smith #include <petscsys.h> 1538d382aafbSBarry Smith PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1539d382aafbSBarry Smith 1540eca87e8dSBarry Smith Not Collective 1541eca87e8dSBarry Smith 1542d382aafbSBarry Smith Input Parameters: 1543d382aafbSBarry Smith . format - the usual printf() format string 1544d382aafbSBarry Smith 1545d382aafbSBarry Smith Level: developer 1546d382aafbSBarry Smith 1547d382aafbSBarry Smith Fortran Note: 1548d382aafbSBarry Smith This routine is not supported in Fortran. 1549d382aafbSBarry Smith 1550d382aafbSBarry Smith 1551d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1552d382aafbSBarry Smith M*/ 1553014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1554d382aafbSBarry Smith 1555fcfd50ebSBarry Smith /* 1556fcfd50ebSBarry Smith Defines PETSc profiling. 1557fcfd50ebSBarry Smith */ 15582c8e378dSBarry Smith #include <petsclog.h> 1559fcfd50ebSBarry Smith 1560fcfd50ebSBarry Smith /* 1561fcfd50ebSBarry Smith Simple PETSc parallel IO for ASCII printing 1562fcfd50ebSBarry Smith */ 1563014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1564014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1565014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1566014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1567014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1568014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1569014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 15701b5687a1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1571fcfd50ebSBarry Smith 1572014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1573014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1574014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1575d382aafbSBarry Smith 1576d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1577d781fa04SBarry Smith PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1578d781fa04SBarry Smith 1579d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN) 1580014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1581016831caSBarry Smith PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 158274ba8654SBarry Smith PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1583d382aafbSBarry Smith #endif 1584d382aafbSBarry Smith 1585014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1586014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 15870ec8b6e3SBarry Smith PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1588014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1589014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1590014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1591014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1592d382aafbSBarry Smith 1593014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1594014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void**); 1595014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void*); 1596014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1597014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer*); 1598014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer,PetscErrorCode (*)(void*)); 1599b61ba218SStefano Zampini PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1600d382aafbSBarry Smith 1601d382aafbSBarry Smith /* 1602d382aafbSBarry Smith For use in debuggers 1603d382aafbSBarry Smith */ 1604014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1605014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1606014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1607014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1608014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1609d382aafbSBarry Smith 1610a663daf8SBarry Smith #include <stddef.h> 1611a3aaec0aSJed Brown #include <string.h> /* for memcpy, memset */ 1612d382aafbSBarry Smith #include <stdlib.h> 16136c7e564aSBarry Smith 16144a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1615d382aafbSBarry Smith #include <xmmintrin.h> 1616d382aafbSBarry Smith #endif 1617d382aafbSBarry Smith 1618d382aafbSBarry Smith /*@C 1619580bdb30SBarry Smith PetscMemmove - Copies n bytes, beginning at location b, to the space 1620580bdb30SBarry Smith beginning at location a. Copying between regions that overlap will 1621580bdb30SBarry Smith take place correctly. Use PetscMemcpy() if the locations do not overlap 1622580bdb30SBarry Smith 1623580bdb30SBarry Smith Not Collective 1624580bdb30SBarry Smith 1625580bdb30SBarry Smith Input Parameters: 1626580bdb30SBarry Smith + b - pointer to initial memory space 1627580bdb30SBarry Smith . a - pointer to copy space 1628580bdb30SBarry Smith - n - length (in bytes) of space to copy 1629580bdb30SBarry Smith 1630580bdb30SBarry Smith Level: intermediate 1631580bdb30SBarry Smith 1632580bdb30SBarry Smith Note: 1633857a15f1SBarry Smith PetscArraymove() is preferred 1634580bdb30SBarry Smith This routine is analogous to memmove(). 1635580bdb30SBarry Smith 1636580bdb30SBarry Smith Developers Note: This is inlined for performance 1637580bdb30SBarry Smith 1638580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1639580bdb30SBarry Smith PetscArraymove() 1640580bdb30SBarry Smith @*/ 1641580bdb30SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1642580bdb30SBarry Smith { 1643580bdb30SBarry Smith PetscFunctionBegin; 1644580bdb30SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1645580bdb30SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1646580bdb30SBarry Smith #if !defined(PETSC_HAVE_MEMMOVE) 1647580bdb30SBarry Smith if (a < b) { 1648580bdb30SBarry Smith if (a <= b - n) memcpy(a,b,n); 1649580bdb30SBarry Smith else { 1650580bdb30SBarry Smith memcpy(a,b,(int)(b - a)); 1651580bdb30SBarry Smith PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1652580bdb30SBarry Smith } 1653580bdb30SBarry Smith } else { 1654580bdb30SBarry Smith if (b <= a - n) memcpy(a,b,n); 1655580bdb30SBarry Smith else { 1656580bdb30SBarry Smith memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1657580bdb30SBarry Smith PetscMemmove(a,b,n - (int)(a - b)); 1658580bdb30SBarry Smith } 1659580bdb30SBarry Smith } 1660580bdb30SBarry Smith #else 1661580bdb30SBarry Smith memmove((char*)(a),(char*)(b),n); 1662580bdb30SBarry Smith #endif 1663580bdb30SBarry Smith PetscFunctionReturn(0); 1664580bdb30SBarry Smith } 1665580bdb30SBarry Smith 1666d382aafbSBarry Smith /*@C 1667d382aafbSBarry Smith PetscMemcpy - Copies n bytes, beginning at location b, to the space 1668d382aafbSBarry Smith beginning at location a. The two memory regions CANNOT overlap, use 1669d382aafbSBarry Smith PetscMemmove() in that case. 1670d382aafbSBarry Smith 1671d382aafbSBarry Smith Not Collective 1672d382aafbSBarry Smith 1673d382aafbSBarry Smith Input Parameters: 1674d382aafbSBarry Smith + b - pointer to initial memory space 1675d382aafbSBarry Smith - n - length (in bytes) of space to copy 1676d382aafbSBarry Smith 1677d382aafbSBarry Smith Output Parameter: 1678d382aafbSBarry Smith . a - pointer to copy space 1679d382aafbSBarry Smith 1680d382aafbSBarry Smith Level: intermediate 1681d382aafbSBarry Smith 1682d382aafbSBarry Smith Compile Option: 1683d382aafbSBarry Smith PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1684d382aafbSBarry Smith for memory copies on double precision values. 1685d382aafbSBarry Smith PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1686d382aafbSBarry Smith for memory copies on double precision values. 1687d382aafbSBarry Smith PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1688d382aafbSBarry Smith for memory copies on double precision values. 1689d382aafbSBarry Smith 1690d382aafbSBarry Smith Note: 1691580bdb30SBarry Smith Prefer PetscArraycpy() 1692d382aafbSBarry Smith This routine is analogous to memcpy(). 16931fd49c25SBarry Smith Not available from Fortran 16941fd49c25SBarry Smith 1695f5f57ec0SBarry Smith Developer Note: this is inlined for fastest performance 1696f5f57ec0SBarry Smith 1697580bdb30SBarry Smith .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1698d382aafbSBarry Smith 1699d382aafbSBarry Smith @*/ 17007087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1701d382aafbSBarry Smith { 1702d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1703c5e4d11fSDmitry Karpeev size_t al = (size_t) a,bl = (size_t) b; 1704c5e4d11fSDmitry Karpeev size_t nl = (size_t) n; 1705a7e36092SMatthew G Knepley PetscFunctionBegin; 1706e32f2f54SBarry Smith if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1707e32f2f54SBarry Smith if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1708a7e36092SMatthew G Knepley #else 1709d382aafbSBarry Smith PetscFunctionBegin; 1710a7e36092SMatthew G Knepley #endif 1711a47a537aSLisandro Dalcin if (a != b && n > 0) { 1712d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1713e47d2de2SBarry Smith if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1714d382aafbSBarry Smith or make sure your copy regions and lengths are correct. \n\ 1715d382aafbSBarry Smith Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1716d382aafbSBarry Smith #endif 1717d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1718c5e4d11fSDmitry Karpeev if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1719d382aafbSBarry Smith size_t len = n/sizeof(PetscScalar); 1720d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1721c5df96a5SBarry Smith PetscBLASInt one = 1,blen; 1722c5df96a5SBarry Smith PetscErrorCode ierr; 1723c5df96a5SBarry Smith ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 17248b83055fSJed Brown PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1725d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1726d382aafbSBarry Smith fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1727d382aafbSBarry Smith #else 1728d382aafbSBarry Smith size_t i; 1729d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1730d382aafbSBarry Smith for (i=0; i<len; i++) y[i] = x[i]; 1731d382aafbSBarry Smith #endif 1732d382aafbSBarry Smith } else { 1733d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1734d382aafbSBarry Smith } 1735d382aafbSBarry Smith #else 1736d382aafbSBarry Smith memcpy((char*)(a),(char*)(b),n); 1737d382aafbSBarry Smith #endif 1738d382aafbSBarry Smith } 1739d382aafbSBarry Smith PetscFunctionReturn(0); 1740d382aafbSBarry Smith } 1741d382aafbSBarry Smith 1742d382aafbSBarry Smith /*@C 1743d382aafbSBarry Smith PetscMemzero - Zeros the specified memory. 1744d382aafbSBarry Smith 1745d382aafbSBarry Smith Not Collective 1746d382aafbSBarry Smith 1747d382aafbSBarry Smith Input Parameters: 1748d382aafbSBarry Smith + a - pointer to beginning memory location 1749d382aafbSBarry Smith - n - length (in bytes) of memory to initialize 1750d382aafbSBarry Smith 1751d382aafbSBarry Smith Level: intermediate 1752d382aafbSBarry Smith 1753d382aafbSBarry Smith Compile Option: 1754d382aafbSBarry Smith PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1755d382aafbSBarry Smith to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1756d382aafbSBarry Smith 17571fd49c25SBarry Smith Not available from Fortran 1758857a15f1SBarry Smith Prefer PetscArrayzero() 17591fd49c25SBarry Smith 1760503cfb0cSBarry Smith Developer Note: this is inlined for fastest performance 1761503cfb0cSBarry Smith 1762580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1763d382aafbSBarry Smith @*/ 17647087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1765d382aafbSBarry Smith { 1766d382aafbSBarry Smith if (n > 0) { 1767d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG) 1768e32f2f54SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1769d382aafbSBarry Smith #endif 1770d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1771d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1772d382aafbSBarry Smith size_t i,len = n/sizeof(PetscScalar); 1773d382aafbSBarry Smith PetscScalar *x = (PetscScalar*)a; 1774d382aafbSBarry Smith for (i=0; i<len; i++) x[i] = 0.0; 1775d382aafbSBarry Smith } else { 1776d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1777d382aafbSBarry Smith if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1778d382aafbSBarry Smith PetscInt len = n/sizeof(PetscScalar); 1779d382aafbSBarry Smith fortranzero_(&len,(PetscScalar*)a); 1780d382aafbSBarry Smith } else { 1781d382aafbSBarry Smith #endif 1782d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO) 1783d382aafbSBarry Smith bzero((char *)a,n); 1784d382aafbSBarry Smith #else 1785d382aafbSBarry Smith memset((char*)a,0,n); 1786d382aafbSBarry Smith #endif 1787d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1788d382aafbSBarry Smith } 1789d382aafbSBarry Smith #endif 1790d382aafbSBarry Smith } 1791d382aafbSBarry Smith return 0; 1792d382aafbSBarry Smith } 1793d382aafbSBarry Smith 1794d382aafbSBarry Smith /*MC 1795580bdb30SBarry Smith PetscArraycmp - Compares two arrays in memory. 1796580bdb30SBarry Smith 1797580bdb30SBarry Smith Synopsis: 1798580bdb30SBarry Smith #include <petscsys.h> 1799580bdb30SBarry Smith PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1800580bdb30SBarry Smith 1801580bdb30SBarry Smith Not Collective 1802580bdb30SBarry Smith 1803580bdb30SBarry Smith Input Parameters: 1804580bdb30SBarry Smith + str1 - First array 1805580bdb30SBarry Smith . str2 - Second array 1806580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1807580bdb30SBarry Smith 1808580bdb30SBarry Smith Output Parameters: 1809580bdb30SBarry Smith . e - PETSC_TRUE if equal else PETSC_FALSE. 1810580bdb30SBarry Smith 1811580bdb30SBarry Smith Level: intermediate 1812580bdb30SBarry Smith 1813580bdb30SBarry Smith Note: 1814857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcmp() 1815580bdb30SBarry Smith The arrays must be of the same type 1816580bdb30SBarry Smith 1817580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1818580bdb30SBarry Smith PetscArraymove() 1819580bdb30SBarry Smith M*/ 18209e2232c7SLisandro Dalcin #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1821580bdb30SBarry Smith 18228f8f2f0dSBarry Smith /*MC 1823580bdb30SBarry Smith PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1824580bdb30SBarry Smith do not overlap 1825580bdb30SBarry Smith 1826580bdb30SBarry Smith Synopsis: 1827580bdb30SBarry Smith #include <petscsys.h> 1828580bdb30SBarry Smith PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1829580bdb30SBarry Smith 1830580bdb30SBarry Smith Not Collective 1831580bdb30SBarry Smith 1832580bdb30SBarry Smith Input Parameters: 1833580bdb30SBarry Smith + str1 - First array 1834580bdb30SBarry Smith . str2 - Second array 1835580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1836580bdb30SBarry Smith 1837580bdb30SBarry Smith Level: intermediate 1838580bdb30SBarry Smith 1839580bdb30SBarry Smith Note: 1840857a15f1SBarry Smith This routine is a preferred replacement to PetscMemmove() 1841580bdb30SBarry Smith The arrays must be of the same type 1842580bdb30SBarry Smith 1843580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1844580bdb30SBarry Smith M*/ 18459e2232c7SLisandro Dalcin #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1846580bdb30SBarry Smith 18478f8f2f0dSBarry Smith /*MC 1848580bdb30SBarry Smith PetscArraycpy - Copies from one array in memory to another 1849580bdb30SBarry Smith 1850580bdb30SBarry Smith Synopsis: 1851580bdb30SBarry Smith #include <petscsys.h> 1852580bdb30SBarry Smith PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1853580bdb30SBarry Smith 1854580bdb30SBarry Smith Not Collective 1855580bdb30SBarry Smith 1856580bdb30SBarry Smith Input Parameters: 1857de25709eSStefano Zampini + str1 - First array (destination) 1858de25709eSStefano Zampini . str2 - Second array (source) 1859580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the arrays 1860580bdb30SBarry Smith 1861580bdb30SBarry Smith Level: intermediate 1862580bdb30SBarry Smith 1863580bdb30SBarry Smith Note: 1864857a15f1SBarry Smith This routine is a preferred replacement to PetscMemcpy() 1865580bdb30SBarry Smith The arrays must be of the same type 1866580bdb30SBarry Smith 1867580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1868580bdb30SBarry Smith M*/ 18699e2232c7SLisandro Dalcin #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1870580bdb30SBarry Smith 18718f8f2f0dSBarry Smith /*MC 1872580bdb30SBarry Smith PetscArrayzero - Zeros an array in memory. 1873580bdb30SBarry Smith 1874580bdb30SBarry Smith Synopsis: 1875580bdb30SBarry Smith #include <petscsys.h> 1876580bdb30SBarry Smith PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1877580bdb30SBarry Smith 1878580bdb30SBarry Smith Not Collective 1879580bdb30SBarry Smith 1880580bdb30SBarry Smith Input Parameters: 1881580bdb30SBarry Smith + str1 - array 1882580bdb30SBarry Smith - cnt - Count of the array, not in bytes, but number of entries in the array 1883580bdb30SBarry Smith 1884580bdb30SBarry Smith Level: intermediate 1885580bdb30SBarry Smith 1886580bdb30SBarry Smith Note: 1887857a15f1SBarry Smith This routine is a preferred replacement to PetscMemzero() 1888580bdb30SBarry Smith 1889580bdb30SBarry Smith .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 1890580bdb30SBarry Smith M*/ 18919e2232c7SLisandro Dalcin #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 1892580bdb30SBarry Smith 1893d382aafbSBarry Smith /*MC 1894d382aafbSBarry Smith PetscPrefetchBlock - Prefetches a block of memory 1895d382aafbSBarry Smith 1896eca87e8dSBarry Smith Synopsis: 1897aaa7dc30SBarry Smith #include <petscsys.h> 1898eca87e8dSBarry Smith void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1899eca87e8dSBarry Smith 1900d382aafbSBarry Smith Not Collective 1901d382aafbSBarry Smith 1902d382aafbSBarry Smith Input Parameters: 1903d382aafbSBarry Smith + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1904d382aafbSBarry Smith . n - number of elements to fetch 1905d382aafbSBarry Smith . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 190650d8bf02SJed Brown - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1907d382aafbSBarry Smith 1908d382aafbSBarry Smith Level: developer 1909d382aafbSBarry Smith 1910d382aafbSBarry Smith Notes: 1911d382aafbSBarry Smith The last two arguments (rw and t) must be compile-time constants. 1912d382aafbSBarry Smith 191350d8bf02SJed Brown Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 191450d8bf02SJed Brown equivalent locality hints, but the following macros are always defined to their closest analogue. 191550d8bf02SJed Brown + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 191663cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 191763cf1ef0SJed Brown . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 191863cf1ef0SJed Brown - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1919d382aafbSBarry Smith 1920d382aafbSBarry Smith This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1921d382aafbSBarry Smith address). 1922d382aafbSBarry Smith 1923d382aafbSBarry Smith M*/ 1924d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do { \ 1925d382aafbSBarry Smith const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1926d382aafbSBarry Smith for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1927d382aafbSBarry Smith } while (0) 1928d382aafbSBarry Smith 1929d382aafbSBarry Smith /* 1930d382aafbSBarry Smith Determine if some of the kernel computation routines use 1931d382aafbSBarry Smith Fortran (rather than C) for the numerical calculations. On some machines 1932d382aafbSBarry Smith and compilers (like complex numbers) the Fortran version of the routines 1933d382aafbSBarry Smith is faster than the C/C++ versions. The flag --with-fortran-kernels 1934e2e64c6bSBarry Smith should be used with ./configure to turn these on. 1935d382aafbSBarry Smith */ 1936d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS) 1937d382aafbSBarry Smith 1938d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1939d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1940d382aafbSBarry Smith #endif 1941d382aafbSBarry Smith 19425a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 19435a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1944d382aafbSBarry Smith #endif 1945d382aafbSBarry Smith 1946d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1947d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1948d382aafbSBarry Smith #endif 1949d382aafbSBarry Smith 1950d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1951d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1952d382aafbSBarry Smith #endif 1953d382aafbSBarry Smith 1954d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1955d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM 1956d382aafbSBarry Smith #endif 1957d382aafbSBarry Smith 1958d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1959d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1960d382aafbSBarry Smith #endif 1961d382aafbSBarry Smith 1962d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1963d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1964d382aafbSBarry Smith #endif 1965d382aafbSBarry Smith 1966d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1967d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1968d382aafbSBarry Smith #endif 1969d382aafbSBarry Smith 1970d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1971d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1972d382aafbSBarry Smith #endif 1973d382aafbSBarry Smith 1974d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1975d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1976d382aafbSBarry Smith #endif 1977d382aafbSBarry Smith 1978d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1979d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT 1980d382aafbSBarry Smith #endif 1981d382aafbSBarry Smith 1982d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1983d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1984d382aafbSBarry Smith #endif 1985d382aafbSBarry Smith 1986d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1987d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX 1988d382aafbSBarry Smith #endif 1989d382aafbSBarry Smith 1990d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1991d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1992d382aafbSBarry Smith #endif 1993d382aafbSBarry Smith 1994d382aafbSBarry Smith #endif 1995d382aafbSBarry Smith 1996d382aafbSBarry Smith /* 1997d382aafbSBarry Smith Macros for indicating code that should be compiled with a C interface, 1998d382aafbSBarry Smith rather than a C++ interface. Any routines that are dynamically loaded 1999d382aafbSBarry Smith (such as the PCCreate_XXX() routines) must be wrapped so that the name 2000d382aafbSBarry Smith mangler does not change the functions symbol name. This just hides the 2001d382aafbSBarry Smith ugly extern "C" {} wrappers. 2002d382aafbSBarry Smith */ 2003d382aafbSBarry Smith #if defined(__cplusplus) 2004d382aafbSBarry Smith # define EXTERN_C_BEGIN extern "C" { 2005d382aafbSBarry Smith # define EXTERN_C_END } 2006d382aafbSBarry Smith #else 2007d382aafbSBarry Smith # define EXTERN_C_BEGIN 2008d382aafbSBarry Smith # define EXTERN_C_END 2009d382aafbSBarry Smith #endif 2010d382aafbSBarry Smith 2011d382aafbSBarry Smith /* --------------------------------------------------------------------*/ 2012d382aafbSBarry Smith 2013d382aafbSBarry Smith /*MC 2014d382aafbSBarry Smith MPI_Comm - the basic object used by MPI to determine which processes are involved in a 2015d382aafbSBarry Smith communication 2016d382aafbSBarry Smith 2017d382aafbSBarry Smith Level: beginner 2018d382aafbSBarry Smith 2019d382aafbSBarry Smith Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 2020d382aafbSBarry Smith 2021d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 2022d382aafbSBarry Smith M*/ 2023d382aafbSBarry Smith 2024d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO) 2025014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2026014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2027c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2028c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2029c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_write_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2030c4e82887SLisandro Dalcin PETSC_EXTERN PetscErrorCode MPIU_File_read_at_all(MPI_File,MPI_Offset,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2031d382aafbSBarry Smith #endif 2032d382aafbSBarry Smith 2033d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */ 2034d382aafbSBarry Smith 2035d382aafbSBarry Smith /* Limit MPI to 32-bits */ 2036d382aafbSBarry Smith #define PETSC_MPI_INT_MAX 2147483647 2037d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647 2038d382aafbSBarry Smith /* Limit BLAS to 32-bits */ 2039d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX 2147483647 2040d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647 2041d382aafbSBarry Smith 204261b0d812SBarry Smith /*@C 2043c73702f5SBarry Smith PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 2044c73702f5SBarry Smith error if the PetscInt is not large enough to hold the number. 2045c73702f5SBarry Smith 2046c73702f5SBarry Smith Not Collective 2047c73702f5SBarry Smith 2048c73702f5SBarry Smith Input Parameter: 2049c73702f5SBarry Smith . a - the PetscInt64 value 2050c73702f5SBarry Smith 2051c73702f5SBarry Smith Output Parameter: 2052c73702f5SBarry Smith . b - the resulting PetscInt value 2053c73702f5SBarry Smith 2054c73702f5SBarry Smith Level: advanced 2055c73702f5SBarry Smith 2056c73702f5SBarry Smith Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 2057c73702f5SBarry Smith 2058c73702f5SBarry Smith Not available from Fortran 2059c73702f5SBarry Smith 2060c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast() 2061c73702f5SBarry Smith @*/ 2062c73702f5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 2063c73702f5SBarry Smith { 2064c73702f5SBarry Smith PetscFunctionBegin; 2065c73702f5SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2066c73702f5SBarry Smith if ((a) > PETSC_MAX_INT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Integer too long for PetscInt, you may need to ./configure using --with-64-bit-indices"); 2067c73702f5SBarry Smith #endif 2068c73702f5SBarry Smith *b = (PetscInt)(a); 2069c73702f5SBarry Smith PetscFunctionReturn(0); 2070c73702f5SBarry Smith } 2071c73702f5SBarry Smith 2072c73702f5SBarry Smith /*@C 207361b0d812SBarry Smith PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 207461b0d812SBarry Smith error if the PetscBLASInt is not large enough to hold the number. 207561b0d812SBarry Smith 207661b0d812SBarry Smith Not Collective 207761b0d812SBarry Smith 207861b0d812SBarry Smith Input Parameter: 207961b0d812SBarry Smith . a - the PetscInt value 208061b0d812SBarry Smith 208161b0d812SBarry Smith Output Parameter: 208261b0d812SBarry Smith . b - the resulting PetscBLASInt value 208361b0d812SBarry Smith 208461b0d812SBarry Smith Level: advanced 208561b0d812SBarry Smith 20861fd49c25SBarry Smith Not available from Fortran 20871fd49c25SBarry Smith 2088c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 208961b0d812SBarry Smith @*/ 2090c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 2091c5df96a5SBarry Smith { 2092c5df96a5SBarry Smith PetscFunctionBegin; 2093c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 209473f49a0bSSatish Balay *b = 0; 2095c5df96a5SBarry Smith if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK"); 2096c5df96a5SBarry Smith #endif 2097c73702f5SBarry Smith *b = (PetscBLASInt)(a); 2098c5df96a5SBarry Smith PetscFunctionReturn(0); 2099c5df96a5SBarry Smith } 2100c5df96a5SBarry Smith 210161b0d812SBarry Smith /*@C 210261b0d812SBarry Smith PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 210361b0d812SBarry Smith error if the PetscMPIInt is not large enough to hold the number. 210461b0d812SBarry Smith 210561b0d812SBarry Smith Not Collective 210661b0d812SBarry Smith 210761b0d812SBarry Smith Input Parameter: 210861b0d812SBarry Smith . a - the PetscInt value 210961b0d812SBarry Smith 211061b0d812SBarry Smith Output Parameter: 211161b0d812SBarry Smith . b - the resulting PetscMPIInt value 211261b0d812SBarry Smith 211361b0d812SBarry Smith Level: advanced 211461b0d812SBarry Smith 21151fd49c25SBarry Smith Not available from Fortran 21161fd49c25SBarry Smith 2117c73702f5SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 211861b0d812SBarry Smith @*/ 21194dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 21204dc2109aSBarry Smith { 21214dc2109aSBarry Smith PetscFunctionBegin; 21224dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 212373f49a0bSSatish Balay *b = 0; 21244dc2109aSBarry Smith if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI"); 21254dc2109aSBarry Smith #endif 2126c73702f5SBarry Smith *b = (PetscMPIInt)(a); 21274dc2109aSBarry Smith PetscFunctionReturn(0); 21284dc2109aSBarry Smith } 21294dc2109aSBarry Smith 2130bafee8b4SSatish Balay #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 21312f18eb33SBarry Smith 21322f18eb33SBarry Smith /*@C 21332f18eb33SBarry Smith 21342f18eb33SBarry Smith PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 21352f18eb33SBarry Smith 21362f18eb33SBarry Smith Not Collective 21372f18eb33SBarry Smith 21382f18eb33SBarry Smith Input Parameter: 21392f18eb33SBarry Smith + a - the PetscReal value 21402f18eb33SBarry Smith - b - the second value 21412f18eb33SBarry Smith 2142390e1bf2SBarry Smith Returns: 2143390e1bf2SBarry Smith the result as a PetscInt value 21442f18eb33SBarry Smith 2145bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 21462f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 21472f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 21482f18eb33SBarry Smith 2149e28ce29aSPatrick Sanan Developers Note: 2150e28ce29aSPatrick Sanan We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 21512f18eb33SBarry Smith 21522f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21532f18eb33SBarry Smith 21541fd49c25SBarry Smith Not available from Fortran 21551fd49c25SBarry Smith 21562f18eb33SBarry Smith Level: advanced 21572f18eb33SBarry Smith 2158390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 21592f18eb33SBarry Smith @*/ 21602f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 21612f18eb33SBarry Smith { 2162bafee8b4SSatish Balay PetscInt64 r; 21632f18eb33SBarry Smith 2164bafee8b4SSatish Balay r = (PetscInt64) (a*(PetscReal)b); 21652f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 21662f18eb33SBarry Smith return (PetscInt) r; 21672f18eb33SBarry Smith } 21682f18eb33SBarry Smith 21692f18eb33SBarry Smith /*@C 21702f18eb33SBarry Smith 21712f18eb33SBarry Smith PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 21722f18eb33SBarry Smith 21732f18eb33SBarry Smith Not Collective 21742f18eb33SBarry Smith 21752f18eb33SBarry Smith Input Parameter: 21762f18eb33SBarry Smith + a - the PetscInt value 21772f18eb33SBarry Smith - b - the second value 21782f18eb33SBarry Smith 2179390e1bf2SBarry Smith Returns: 2180390e1bf2SBarry Smith the result as a PetscInt value 21812f18eb33SBarry Smith 2182bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 21832f18eb33SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 21842f18eb33SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 21852f18eb33SBarry Smith 21861fd49c25SBarry Smith Not available from Fortran 21871fd49c25SBarry Smith 21882f18eb33SBarry Smith Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 21892f18eb33SBarry Smith 21902f18eb33SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 21912f18eb33SBarry Smith 21922f18eb33SBarry Smith Level: advanced 21932f18eb33SBarry Smith 2194390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 21952f18eb33SBarry Smith @*/ 21962f18eb33SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 21972f18eb33SBarry Smith { 2198bafee8b4SSatish Balay PetscInt64 r; 21992f18eb33SBarry Smith 2200bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 22012f18eb33SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 22022f18eb33SBarry Smith return (PetscInt) r; 22032f18eb33SBarry Smith } 22042f18eb33SBarry Smith 2205f91af8c7SBarry Smith /*@C 2206f91af8c7SBarry Smith 2207f91af8c7SBarry Smith PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2208f91af8c7SBarry Smith 2209f91af8c7SBarry Smith Not Collective 2210f91af8c7SBarry Smith 2211f91af8c7SBarry Smith Input Parameter: 2212f91af8c7SBarry Smith + a - the PetscInt value 2213f91af8c7SBarry Smith - b - the second value 2214f91af8c7SBarry Smith 2215390e1bf2SBarry Smith Returns: 2216390e1bf2SBarry Smith the result as a PetscInt value 2217f91af8c7SBarry Smith 2218bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2219f91af8c7SBarry Smith Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2220f91af8c7SBarry Smith Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2221f91af8c7SBarry Smith 2222f91af8c7SBarry Smith This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2223f91af8c7SBarry Smith 2224f5f57ec0SBarry Smith Not available from Fortran 2225f5f57ec0SBarry Smith 2226f91af8c7SBarry Smith Level: advanced 2227f91af8c7SBarry Smith 2228390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2229f91af8c7SBarry Smith @*/ 2230f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2231f91af8c7SBarry Smith { 2232bafee8b4SSatish Balay PetscInt64 r; 2233f91af8c7SBarry Smith 2234bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2235f91af8c7SBarry Smith if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2236f91af8c7SBarry Smith return (PetscInt) r; 2237f91af8c7SBarry Smith } 2238f91af8c7SBarry Smith 22392f18eb33SBarry Smith /*@C 22402f18eb33SBarry Smith 22412f18eb33SBarry Smith PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 22422f18eb33SBarry Smith 22432f18eb33SBarry Smith Not Collective 22442f18eb33SBarry Smith 22452f18eb33SBarry Smith Input Parameter: 22462f18eb33SBarry Smith + a - the PetscInt value 22472f18eb33SBarry Smith - b - the second value 22482f18eb33SBarry Smith 22492f18eb33SBarry Smith Output Parameter:ma 2250390e1bf2SBarry Smith . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 22512f18eb33SBarry Smith 2252bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 22532f18eb33SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 22542f18eb33SBarry Smith 2255f5f57ec0SBarry Smith Not available from Fortran 2256f5f57ec0SBarry Smith 2257220afb94SBarry Smith Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 22582f18eb33SBarry Smith 22592f18eb33SBarry Smith Level: advanced 22602f18eb33SBarry Smith 2261220afb94SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 22622f18eb33SBarry Smith @*/ 22632f18eb33SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 22642f18eb33SBarry Smith { 2265bafee8b4SSatish Balay PetscInt64 r; 22662f18eb33SBarry Smith 22672f18eb33SBarry Smith PetscFunctionBegin; 2268bafee8b4SSatish Balay r = PetscInt64Mult(a,b); 22692f18eb33SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 22702f18eb33SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 22712f18eb33SBarry Smith #endif 2272f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 2273f91af8c7SBarry Smith PetscFunctionReturn(0); 2274f91af8c7SBarry Smith } 2275f91af8c7SBarry Smith 2276f91af8c7SBarry Smith /*@C 2277f91af8c7SBarry Smith 2278fbfcfee5SBarry Smith PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2279f91af8c7SBarry Smith 2280f91af8c7SBarry Smith Not Collective 2281f91af8c7SBarry Smith 2282f91af8c7SBarry Smith Input Parameter: 2283f91af8c7SBarry Smith + a - the PetscInt value 2284f91af8c7SBarry Smith - b - the second value 2285f91af8c7SBarry Smith 2286f91af8c7SBarry Smith Output Parameter:ma 2287390e1bf2SBarry Smith . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2288f91af8c7SBarry Smith 2289bafee8b4SSatish Balay Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2290f91af8c7SBarry Smith Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2291f91af8c7SBarry Smith 2292f5f57ec0SBarry Smith Not available from Fortran 2293f5f57ec0SBarry Smith 2294f91af8c7SBarry Smith Level: advanced 2295f91af8c7SBarry Smith 2296390e1bf2SBarry Smith .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2297f91af8c7SBarry Smith @*/ 2298f91af8c7SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2299f91af8c7SBarry Smith { 2300bafee8b4SSatish Balay PetscInt64 r; 2301f91af8c7SBarry Smith 2302f91af8c7SBarry Smith PetscFunctionBegin; 2303bafee8b4SSatish Balay r = ((PetscInt64)a) + ((PetscInt64)b); 2304f91af8c7SBarry Smith #if !defined(PETSC_USE_64BIT_INDICES) 2305f91af8c7SBarry Smith if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2306f91af8c7SBarry Smith #endif 2307f91af8c7SBarry Smith if (result) *result = (PetscInt) r; 23082f18eb33SBarry Smith PetscFunctionReturn(0); 23092f18eb33SBarry Smith } 2310c5df96a5SBarry Smith 2311d382aafbSBarry Smith /* 23122981ebdbSBarry Smith The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2313d382aafbSBarry Smith */ 2314d382aafbSBarry Smith #if defined(hz) 2315d382aafbSBarry Smith # undef hz 2316d382aafbSBarry Smith #endif 2317d382aafbSBarry Smith 231815a5570dSLisandro Dalcin #include <limits.h> 231915a5570dSLisandro Dalcin 232015a5570dSLisandro Dalcin /* The number of bits in a byte */ 232115a5570dSLisandro Dalcin 232215a5570dSLisandro Dalcin #define PETSC_BITS_PER_BYTE CHAR_BIT 232315a5570dSLisandro Dalcin 2324d382aafbSBarry Smith /* For arrays that contain filenames or paths */ 2325d382aafbSBarry Smith 2326d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H) 2327d382aafbSBarry Smith # include <sys/param.h> 2328d382aafbSBarry Smith #endif 2329d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H) 2330d382aafbSBarry Smith # include <sys/types.h> 2331d382aafbSBarry Smith #endif 2332d382aafbSBarry Smith #if defined(MAXPATHLEN) 2333d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAXPATHLEN 2334d382aafbSBarry Smith #elif defined(MAX_PATH) 2335d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN MAX_PATH 2336d382aafbSBarry Smith #elif defined(_MAX_PATH) 2337d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN _MAX_PATH 2338d382aafbSBarry Smith #else 2339d382aafbSBarry Smith # define PETSC_MAX_PATH_LEN 4096 2340d382aafbSBarry Smith #endif 2341d382aafbSBarry Smith 2342d382aafbSBarry Smith /*MC 2343d382aafbSBarry Smith 234466d79e26SBarry Smith PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 234566d79e26SBarry Smith and Fortran compilers when petscsys.h is included. 234666d79e26SBarry Smith 234766d79e26SBarry Smith 234866d79e26SBarry Smith The current PETSc version and the API for accessing it are defined in petscversion.h 234966d79e26SBarry Smith 235066d79e26SBarry Smith The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 235166d79e26SBarry Smith 235266d79e26SBarry Smith A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 235366d79e26SBarry Smith where only a change in the major version number (x) indicates a change in the API. 235466d79e26SBarry Smith 235566d79e26SBarry Smith A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 235666d79e26SBarry Smith 235766d79e26SBarry Smith Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 235866d79e26SBarry Smith PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 235966d79e26SBarry Smith version number (x.y.z). 236066d79e26SBarry Smith 236166d79e26SBarry Smith PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 236266d79e26SBarry Smith 236366d79e26SBarry Smith PETSC_VERSION_DATE is the date the x.y.z version was released 236466d79e26SBarry Smith 236566d79e26SBarry Smith PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 236666d79e26SBarry Smith 236766d79e26SBarry Smith PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 236866d79e26SBarry Smith 236966d79e26SBarry Smith Level: intermediate 237066d79e26SBarry Smith 237166d79e26SBarry Smith PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 237266d79e26SBarry Smith 237366d79e26SBarry Smith M*/ 237466d79e26SBarry Smith 237566d79e26SBarry Smith /*MC 237666d79e26SBarry Smith 23771b266c99SBarry Smith UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning 23781b266c99SBarry Smith of every function and module definition you need something like 2379d382aafbSBarry Smith 2380d382aafbSBarry Smith $ 2381af0996ceSBarry Smith $#include "petsc/finclude/petscXXX.h" 23820f665fc7SPatrick Sanan $ use petscXXX 23831b266c99SBarry Smith 2384692afcd8SPatrick Sanan You can declare PETSc variables using either of the following. 23851b266c99SBarry Smith 2386d382aafbSBarry Smith $ XXX variablename 23871b266c99SBarry Smith $ type(tXXX) variablename 23881b266c99SBarry Smith 2389692afcd8SPatrick Sanan For example, 23901b266c99SBarry Smith 2391bfc4c25eSBarry Smith $#include "petsc/finclude/petscvec.h" 23921b266c99SBarry Smith $ use petscvec 2393d382aafbSBarry Smith $ 2394692afcd8SPatrick Sanan $ Vec b 2395692afcd8SPatrick Sanan $ type(tVec) x 2396d382aafbSBarry Smith 2397d382aafbSBarry Smith Level: beginner 2398d382aafbSBarry Smith 2399d382aafbSBarry Smith M*/ 2400d382aafbSBarry Smith 2401014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2402014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2403014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2404014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2405014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2406014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 240727710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 24085f309d01SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2409d382aafbSBarry Smith 24106a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedInt(PetscInt,const PetscInt[],PetscBool*); 24116a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedMPIInt(PetscInt,const PetscMPIInt[],PetscBool*); 24126a7c706bSVaclav Hapla PETSC_EXTERN PetscErrorCode PetscSortedReal(PetscInt,const PetscReal[],PetscBool*); 2413014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2414ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortReverseInt(PetscInt,PetscInt[]); 241522ab5688SLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2416014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2417f1cab4e1SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscCheckDupsInt(PetscInt,const PetscInt[],PetscBool*); 241860e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2419d2aeb606SJed Brown PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2420014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2421014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2422014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 24236c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 242417d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 242517d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2426014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 24275569a785SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2428014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 242917df18f2SToby Isaac PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2430014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 243139f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2433745b41b2SMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 243439f41f7fSStefano Zampini PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 24386c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 24396c2863d0SBarry Smith PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2440e498c390SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2441d382aafbSBarry Smith 2442ce605777SToby Isaac PETSC_EXTERN PetscErrorCode PetscParallelSortedInt(MPI_Comm, PetscInt, const PetscInt[], PetscBool *); 2443ce605777SToby Isaac 2444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2445014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2446d382aafbSBarry Smith 244776bdecfbSBarry Smith /*J 2448d382aafbSBarry Smith PetscRandomType - String with the name of a PETSc randomizer 2449d382aafbSBarry Smith 2450d382aafbSBarry Smith Level: beginner 2451d382aafbSBarry Smith 2452e28ce29aSPatrick Sanan Notes: 2453e28ce29aSPatrick Sanan To use SPRNG or RANDOM123 you must have ./configure PETSc 245425ccb61fSToby Isaac with the option --download-sprng or --download-random123 2455d382aafbSBarry Smith 24568f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 245776bdecfbSBarry Smith J*/ 245819fd82e9SBarry Smith typedef const char* PetscRandomType; 2459d382aafbSBarry Smith #define PETSCRAND "rand" 2460d382aafbSBarry Smith #define PETSCRAND48 "rand48" 2461d382aafbSBarry Smith #define PETSCSPRNG "sprng" 2462c5e4d11fSDmitry Karpeev #define PETSCRANDER48 "rander48" 246325ccb61fSToby Isaac #define PETSCRANDOM123 "random123" 2464d382aafbSBarry Smith 2465d382aafbSBarry Smith /* Logging support */ 2466014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2467d382aafbSBarry Smith 2468607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2469d382aafbSBarry Smith 2470d382aafbSBarry Smith /* Dynamic creation and loading functions */ 2471140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList; 2472d382aafbSBarry Smith 2473bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 247419fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 247619fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*); 2477fe2efc57SMark PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,PetscObject,const char[]); 2478014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2479d382aafbSBarry Smith 2480014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2481014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2482014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2483014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2484014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2485014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2486014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2487014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2488014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2489d382aafbSBarry Smith 2490014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2491014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2492014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2493014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2494014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2495014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2496014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 249797540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 24988a10d460SHong Zhang PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 249997540f07SSatish Balay PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2500d382aafbSBarry Smith 250130815ce0SLisandro Dalcin PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 250230815ce0SLisandro Dalcin 25039860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 25049860990eSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2505f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,const void*,PetscInt,PetscDataType); 2506f253e43cSLisandro Dalcin PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,const void*,PetscInt,PetscDataType); 2507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2508014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2509014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2510014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2512014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2513014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2514c891a504SStefano Zampini #if defined(PETSC_USE_SOCKET_VIEWER) 2515e2fc02c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2516c891a504SStefano Zampini #endif 2517d382aafbSBarry Smith 2518014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2519014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2521d382aafbSBarry Smith 2522014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2523014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool ); 2524014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2525014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2526014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2527014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2528d382aafbSBarry Smith 2529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2531014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2532014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2533014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2534cf4b5b4fSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2535cf4b5b4fSJed Brown PetscAttrMPIPointerWithType(6,3); 2536d815da10SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2537d815da10SJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2538d815da10SJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2539d815da10SJed Brown PetscAttrMPIPointerWithType(6,3); 25406afbe7ddSJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 25416afbe7ddSJed Brown MPI_Request**,MPI_Request**, 25426afbe7ddSJed Brown PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 25436afbe7ddSJed Brown PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 25446afbe7ddSJed Brown PetscAttrMPIPointerWithType(6,3); 2545d382aafbSBarry Smith 25466145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 25476145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 25486145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 25496145cd65SJed Brown 2550014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2551d382aafbSBarry Smith 2552ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2553ce94432eSBarry Smith 255445487dadSJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[]; 255545487dadSJed Brown 2556d382aafbSBarry Smith struct _n_PetscSubcomm { 2557d382aafbSBarry Smith MPI_Comm parent; /* parent communicator */ 2558d382aafbSBarry Smith MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2559306c2d5bSBarry Smith MPI_Comm child; /* the sub-communicator */ 256045487dadSJed Brown PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 256145487dadSJed Brown PetscMPIInt color; /* color of processors belong to this communicator */ 2562708d824cSJed Brown PetscMPIInt *subsize; /* size of subcommunicator[color] */ 256345487dadSJed Brown PetscSubcommType type; 2564e5acf8a4SHong Zhang char *subcommprefix; 2565d382aafbSBarry Smith }; 2566d382aafbSBarry Smith 2567c5e4d11fSDmitry Karpeev PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2568306c2d5bSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 256936be1a5eSBarry Smith PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2570014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2571014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2572014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2573014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 257465d9b8f1SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2575053d1c95SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2576f68be91cSHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2577e5acf8a4SHong Zhang PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2578a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetParent(PetscSubcomm,MPI_Comm*); 2579a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetContiguousParent(PetscSubcomm,MPI_Comm*); 2580a530d236SBarry Smith PETSC_EXTERN PetscErrorCode PetscSubcommGetChild(PetscSubcomm,MPI_Comm*); 2581d382aafbSBarry Smith 25829962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 25839962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 25849962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 25859962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 25869962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 25879962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 25889962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 25899962606eSBarry Smith PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 25909962606eSBarry Smith 25915e71baefSBarry Smith PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 25925f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 25935f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 25945f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 25955f7487a0SJunchao Zhang PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 25965e71baefSBarry Smith 2597a32e93adSJunchao Zhang /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2598a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2599a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2600a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2601a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2602a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2603a32e93adSJunchao Zhang PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2604a32e93adSJunchao Zhang 260513e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 26060f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 260713e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2608137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2609137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2610137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 261113e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 261213e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 26130f453b92SJed Brown 26145e71baefSBarry Smith 2615471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2616471ecdacSJed Brown * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2617471ecdacSJed Brown * possible. */ 26186a11cab8SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2619d382aafbSBarry Smith 26209de0f6ecSBarry Smith extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 26219de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 26229de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 26239de0f6ecSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 26249de0f6ecSBarry Smith 2625ace2fbaeSBarry Smith #include <stdarg.h> 2626ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2627ace2fbaeSBarry Smith PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2628ace2fbaeSBarry Smith 2629268b0dfdSSatish Balay PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2630fbfcfee5SBarry Smith 26311f817a21SBarry Smith /*@C 26321f817a21SBarry Smith PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 26331f817a21SBarry Smith 26341f817a21SBarry Smith Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 26351f817a21SBarry Smith 26361f817a21SBarry Smith Input Parameters: 26371f817a21SBarry Smith + cite - the bibtex item, formated to displayed on multiple lines nicely 26381f817a21SBarry Smith - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 26391f817a21SBarry Smith 2640850545d0SSatish Balay Level: intermediate 2641850545d0SSatish Balay 2642f5f57ec0SBarry Smith Not available from Fortran 2643f5f57ec0SBarry Smith 26441f817a21SBarry Smith Options Database: 2645063414e0SPatrick Sanan . -citations [filename] - print out the bibtex entries for the given computation 26461f817a21SBarry Smith @*/ 2647dff31646SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2648dff31646SBarry Smith { 2649dff31646SBarry Smith size_t len; 2650dff31646SBarry Smith char *vstring; 2651dff31646SBarry Smith PetscErrorCode ierr; 2652dff31646SBarry Smith 26531f817a21SBarry Smith PetscFunctionBegin; 26548d3683fcSBarry Smith if (set && *set) PetscFunctionReturn(0); 2655dff31646SBarry Smith ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 265635005c2bSLisandro Dalcin ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2657580bdb30SBarry Smith ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2658dff31646SBarry Smith if (set) *set = PETSC_TRUE; 26591f817a21SBarry Smith PetscFunctionReturn(0); 2660dff31646SBarry Smith } 2661dff31646SBarry Smith 2662b967cddfSBarry Smith PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2663fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2664fe278a28SBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2665f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2666fe278a28SBarry Smith 2667f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2668f044a08eSBarry Smith PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2669b967cddfSBarry Smith 26709f4d3c52SBarry Smith PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 26719f4d3c52SBarry Smith 267204102261SBarry Smith PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2673763ec7b1SBarry Smith PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2674dff31646SBarry Smith 267568e69593SBarry Smith PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 26765dc0f0a4SBarry Smith PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2677d382aafbSBarry Smith 2678b2566f29SBarry Smith 2679b2566f29SBarry Smith #if defined(PETSC_USE_DEBUG) 2680b2566f29SBarry Smith /* 2681b2566f29SBarry Smith Verify that all processes in the communicator have called this from the same line of code 2682b2566f29SBarry Smith */ 26838f5db7efSBarry Smith PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 268477a5e07dSBarry Smith 268577a5e07dSBarry Smith /*MC 268677a5e07dSBarry Smith MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 268777a5e07dSBarry Smith same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 268877a5e07dSBarry Smith resulting in inconsistent and incorrect calls to MPI_Allreduce(). 268977a5e07dSBarry Smith 2690d083f849SBarry Smith Collective 269177a5e07dSBarry Smith 269277a5e07dSBarry Smith Synopsis: 269377a5e07dSBarry Smith #include <petscsys.h> 269477a5e07dSBarry Smith PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 269577a5e07dSBarry Smith 269677a5e07dSBarry Smith Input Parameters: 269777a5e07dSBarry Smith + indata - pointer to the input data to be reduced 269877a5e07dSBarry Smith . count - the number of MPI data items in indata and outdata 269977a5e07dSBarry Smith . datatype - the MPI datatype, for example MPI_INT 270077a5e07dSBarry Smith . op - the MPI operation, for example MPI_SUM 270177a5e07dSBarry Smith - comm - the MPI communicator on which the operation occurs 270277a5e07dSBarry Smith 270377a5e07dSBarry Smith Output Parameter: 270477a5e07dSBarry Smith . outdata - the reduced values 270577a5e07dSBarry Smith 2706e28ce29aSPatrick Sanan Notes: 2707e28ce29aSPatrick Sanan In optimized mode this directly calls MPI_Allreduce() 270877a5e07dSBarry Smith 270977a5e07dSBarry Smith Level: developer 271077a5e07dSBarry Smith 271177a5e07dSBarry Smith .seealso: MPI_Allreduce() 271277a5e07dSBarry Smith M*/ 2713fbfcfee5SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 2714b2566f29SBarry Smith #else 2715b2566f29SBarry Smith #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 2716b2566f29SBarry Smith #endif 2717b2566f29SBarry Smith 2718b674149eSJunchao Zhang #if defined(PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY) 27198198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 27208198064fSBarry Smith PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 27212f065d89SBarry Smith #endif 27228198064fSBarry Smith 272312801b39SBarry Smith /* 272412801b39SBarry Smith Returned from PETSc functions that are called from MPI, such as related to attributes 272512801b39SBarry Smith */ 27268ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CLASS; 27278ba48ad5SSatish Balay PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CODE; 272812801b39SBarry Smith 2729d382aafbSBarry Smith #endif 2730