xref: /petsc/include/petscsys.h (revision 8e4b2d1d741fb0f50756bbb35762fb0b3daeffef)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10d382aafbSBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include
112981ebdbSBarry Smith    in the conf/variables definition of PETSC_INCLUDE. For --prefix installs the ${PETSC_ARCH}/
122981ebdbSBarry Smith    does not exist and petscconf.h is in the same directory as the other PETSc include files.
13d382aafbSBarry Smith */
142c8e378dSBarry Smith #include <petscconf.h>
152c8e378dSBarry Smith #include <petscfix.h>
16d382aafbSBarry Smith 
1773fca5a0SBarry Smith #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
1873fca5a0SBarry Smith /*
1973fca5a0SBarry Smith    Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
2073fca5a0SBarry Smith    We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
2173fca5a0SBarry Smith */
22216f1ae6SBarry Smith #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE)
2373fca5a0SBarry Smith #define _POSIX_C_SOURCE 200112L
2473fca5a0SBarry Smith #endif
25216f1ae6SBarry Smith #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE)
2673fca5a0SBarry Smith #define _BSD_SOURCE
2773fca5a0SBarry Smith #endif
28ea0fecefSShri Abhyankar #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE)
29ea0fecefSShri Abhyankar #define _GNU_SOURCE
30ea0fecefSShri Abhyankar #endif
3173fca5a0SBarry Smith #endif
3273fca5a0SBarry Smith 
33d382aafbSBarry Smith /* ========================================================================== */
34d382aafbSBarry Smith /*
352c280183SJed Brown    This facilitates using the C version of PETSc from C++ and the C++ version from C.
36d382aafbSBarry Smith */
371ec50b02SJed Brown #if defined(__cplusplus)
381ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
391ec50b02SJed Brown #else
401ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
411ec50b02SJed Brown #endif
42d382aafbSBarry Smith 
43ab699e31SSatish Balay #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */
44014dd563SJed Brown #  define PETSC_DLLEXPORT __declspec(dllexport)
45014dd563SJed Brown #  define PETSC_DLLIMPORT __declspec(dllimport)
4621f66b81SJed Brown #  define PETSC_VISIBILITY_INTERNAL
47014dd563SJed Brown #elif defined(PETSC_USE_VISIBILITY)
48014dd563SJed Brown #  define PETSC_DLLEXPORT __attribute__((visibility ("default")))
49014dd563SJed Brown #  define PETSC_DLLIMPORT __attribute__((visibility ("default")))
5021f66b81SJed Brown #  define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden")))
51d382aafbSBarry Smith #else
52014dd563SJed Brown #  define PETSC_DLLEXPORT
53014dd563SJed Brown #  define PETSC_DLLIMPORT
5421f66b81SJed Brown #  define PETSC_VISIBILITY_INTERNAL
55014dd563SJed Brown #endif
56014dd563SJed Brown 
57014dd563SJed Brown #if defined(petsc_EXPORTS)      /* CMake defines this when building the shared library */
58014dd563SJed Brown #  define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT
59014dd563SJed Brown #else  /* Win32 users need this to import symbols from petsc.dll */
60014dd563SJed Brown #  define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT
61014dd563SJed Brown #endif
62014dd563SJed Brown 
632c280183SJed Brown #if defined(__cplusplus)
64014dd563SJed Brown #define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC
65638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF extern "C"
6621f66b81SJed Brown #define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL
67014dd563SJed Brown #else
68014dd563SJed Brown #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC
69638cfed1SJed Brown #define PETSC_EXTERN_TYPEDEF
706258c452SJed Brown #define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL
71d382aafbSBarry Smith #endif
7227710113SBarry Smith 
732c8e378dSBarry Smith #include <petscversion.h>
74301d30feSBarry Smith #define PETSC_AUTHOR_INFO  "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
75d382aafbSBarry Smith 
76d382aafbSBarry Smith /* ========================================================================== */
77d382aafbSBarry Smith 
78d382aafbSBarry Smith /*
79d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
80d382aafbSBarry Smith 
81d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
82d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
83d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
84d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
85d382aafbSBarry Smith     mpicxx.h directly in their code
86d382aafbSBarry Smith */
87fa9e63e2SJed Brown #if !defined(MPICH_SKIP_MPICXX)
88d382aafbSBarry Smith #  define MPICH_SKIP_MPICXX 1
89fa9e63e2SJed Brown #endif
90fa9e63e2SJed Brown #if !defined(OMPI_SKIP_MPICXX)
91d382aafbSBarry Smith #  define OMPI_SKIP_MPICXX 1
92fa9e63e2SJed Brown #endif
932c8e378dSBarry Smith #include <mpi.h>
9465013866SBarry Smith 
95d382aafbSBarry Smith /*
962981ebdbSBarry Smith     Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
97d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
98d382aafbSBarry Smith */
99d382aafbSBarry Smith #include <stdio.h>
100d382aafbSBarry Smith 
101d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
102d382aafbSBarry Smith #if !defined(MPIAPI)
103d382aafbSBarry Smith #define MPIAPI
104d382aafbSBarry Smith #endif
105d382aafbSBarry Smith 
106894dd566SJed Brown /* Support for Clang (>=3.2) matching type tag arguments with void* buffer types */
107894dd566SJed Brown #if defined(__has_attribute)
108894dd566SJed Brown #  if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype)
109894dd566SJed Brown #    define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno)))
1108ad47952SJed Brown #    define PetscAttrMPITypeTag(type)                 __attribute__((type_tag_for_datatype(MPI,type)))
1118ad47952SJed Brown #    define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible)))
112894dd566SJed Brown #  endif
113894dd566SJed Brown #endif
114894dd566SJed Brown #if !defined(PetscAttrMPIPointerWithType)
115894dd566SJed Brown #  define PetscAttrMPIPointerWithType(bufno,typeno)
1168ad47952SJed Brown #  define PetscAttrMPITypeTag(type)
1178ad47952SJed Brown #  define PetscAttrMPITypeTagLayoutCompatible(type)
118894dd566SJed Brown #endif
119b3506946SBarry Smith 
120d382aafbSBarry Smith /*MC
121d382aafbSBarry Smith     PetscErrorCode - datatype used for return error code from all PETSc functions
122d382aafbSBarry Smith 
123d382aafbSBarry Smith     Level: beginner
124d382aafbSBarry Smith 
125d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
126d382aafbSBarry Smith M*/
127d382aafbSBarry Smith typedef int PetscErrorCode;
128d382aafbSBarry Smith 
129d382aafbSBarry Smith /*MC
130d382aafbSBarry Smith 
131503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
132d382aafbSBarry Smith          (internal integer in the data structure used for error
1332981ebdbSBarry Smith          checking). These are all computed by an offset from the lowest
1340700a824SBarry Smith          one, PETSC_SMALLEST_CLASSID.
135d382aafbSBarry Smith 
136d382aafbSBarry Smith     Level: advanced
137d382aafbSBarry Smith 
1380700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
139d382aafbSBarry Smith M*/
1400700a824SBarry Smith typedef int PetscClassId;
141d382aafbSBarry Smith 
142d382aafbSBarry Smith 
143d382aafbSBarry Smith /*MC
144d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
145d382aafbSBarry Smith 
146d382aafbSBarry Smith     Level: intermediate
147d382aafbSBarry Smith 
148d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1493b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
150d382aafbSBarry Smith 
1514dc2109aSBarry Smith     PetscMPIIntCast(a,&b) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
1522981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error.
153d382aafbSBarry Smith 
154d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt
155d382aafbSBarry Smith 
156d382aafbSBarry Smith M*/
157d382aafbSBarry Smith typedef int PetscMPIInt;
158d382aafbSBarry Smith 
159d382aafbSBarry Smith /*MC
160d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
161d382aafbSBarry Smith 
162d382aafbSBarry Smith     Level: intermediate
163d382aafbSBarry Smith 
164d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
165d382aafbSBarry Smith M*/
166d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
1675a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum);
168d382aafbSBarry Smith 
169d382aafbSBarry Smith /*MC
170d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
1713b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
172d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
173d382aafbSBarry Smith 
174d382aafbSBarry Smith    Level: intermediate
175d382aafbSBarry Smith 
176d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
177d382aafbSBarry Smith M*/
178f505b413SSatish Balay #if (PETSC_SIZEOF_LONG_LONG == 8)
179f505b413SSatish Balay typedef long long Petsc64bitInt;
180f505b413SSatish Balay #elif defined(PETSC_HAVE___INT64)
181236ed0a3SSatish Balay typedef __int64 Petsc64bitInt;
182236ed0a3SSatish Balay #else
183f505b413SSatish Balay typedef unknown64bit Petsc64bitInt
184236ed0a3SSatish Balay #endif
185d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
186236ed0a3SSatish Balay typedef Petsc64bitInt PetscInt;
187d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT
188d382aafbSBarry Smith #else
189d382aafbSBarry Smith typedef int PetscInt;
190d382aafbSBarry Smith #define MPIU_INT MPI_INT
191d382aafbSBarry Smith #endif
192236ed0a3SSatish Balay 
193d382aafbSBarry Smith 
194702bc34aSSatish Balay /*MC
195702bc34aSSatish Balay     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
196702bc34aSSatish Balay 
197702bc34aSSatish Balay     Level: intermediate
198702bc34aSSatish Balay 
199702bc34aSSatish Balay     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
200702bc34aSSatish Balay            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
201702bc34aSSatish Balay            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
202702bc34aSSatish Balay 
203c5df96a5SBarry Smith     PetscErrorCode PetscBLASIntCast(a,&b) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
2042981ebdbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE error
205702bc34aSSatish Balay 
2062981ebdbSBarry Smith     Installation Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
207702bc34aSSatish Balay      if you run ./configure with the option
208702bc34aSSatish Balay      --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
2092981ebdbSBarry Smith      but you need to also use --known-64-bit-blas-indices.
2102981ebdbSBarry Smith 
2112981ebdbSBarry Smith         MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with --known-64-bit-blas-indices
2122981ebdbSBarry Smith 
2132981ebdbSBarry Smith      Developer Notes: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK.
214702bc34aSSatish Balay 
215702bc34aSSatish Balay      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
216702bc34aSSatish Balay      be used with PETSc if you have set PetscBLASInt to long int.
217702bc34aSSatish Balay 
218702bc34aSSatish Balay .seealso: PetscMPIInt, PetscInt
219702bc34aSSatish Balay 
220702bc34aSSatish Balay M*/
221702bc34aSSatish Balay #if defined(PETSC_HAVE_64BIT_BLAS_INDICES)
222702bc34aSSatish Balay typedef Petsc64bitInt PetscBLASInt;
223702bc34aSSatish Balay #else
224702bc34aSSatish Balay typedef int PetscBLASInt;
225702bc34aSSatish Balay #endif
226702bc34aSSatish Balay 
22758b60935SBarry Smith /*EC
22858b60935SBarry Smith 
2292981ebdbSBarry Smith     PetscPrecision - indicates what precision the object is using. This is currently not used.
23058b60935SBarry Smith 
23158b60935SBarry Smith     Level: advanced
23258b60935SBarry Smith 
23358b60935SBarry Smith .seealso: PetscObjectSetPrecision()
23458b60935SBarry Smith E*/
23558b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;
236014dd563SJed Brown PETSC_EXTERN const char *PetscPrecisions[];
23758b60935SBarry Smith 
238503cfb0cSBarry Smith /*
239503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
240503cfb0cSBarry Smith */
241d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
242adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED
243d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
244adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED_LONG
245d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
246adcec1e5SJed Brown #define MPIU_SIZE_T MPI_UNSIGNED_LONG_LONG
247d382aafbSBarry Smith #else
248d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
249d382aafbSBarry Smith #endif
250d382aafbSBarry Smith 
251d382aafbSBarry Smith 
252d382aafbSBarry Smith /*
253d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
254d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
255d382aafbSBarry Smith */
256014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDOUT;
257d382aafbSBarry Smith 
258d382aafbSBarry Smith /*
259d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
260d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
261d382aafbSBarry Smith */
262014dd563SJed Brown PETSC_EXTERN FILE* PETSC_STDERR;
263d382aafbSBarry Smith 
264d382aafbSBarry Smith /*MC
265d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
266d382aafbSBarry Smith 
267d382aafbSBarry Smith     Synopsis:
268f2ba6396SBarry Smith     #include "petscsys.h"
269ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
270d382aafbSBarry Smith 
271eca87e8dSBarry Smith     Not Collective
272eca87e8dSBarry Smith 
273d382aafbSBarry Smith     Input Parameters:
274d382aafbSBarry Smith .   cond - condition or expression
275d382aafbSBarry Smith 
276d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
277d382aafbSBarry Smith     branch is unlikely.
278d382aafbSBarry Smith 
279d382aafbSBarry Smith     Level: advanced
280d382aafbSBarry Smith 
281d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
282d382aafbSBarry Smith M*/
283d382aafbSBarry Smith 
284d382aafbSBarry Smith /*MC
285d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
286d382aafbSBarry Smith 
287d382aafbSBarry Smith     Synopsis:
288f2ba6396SBarry Smith     #include "petscsys.h"
289ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
290d382aafbSBarry Smith 
291eca87e8dSBarry Smith     Not Collective
292eca87e8dSBarry Smith 
293d382aafbSBarry Smith     Input Parameters:
294d382aafbSBarry Smith .   cond - condition or expression
295d382aafbSBarry Smith 
296d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
297d382aafbSBarry Smith     branch is likely.
298d382aafbSBarry Smith 
299d382aafbSBarry Smith     Level: advanced
300d382aafbSBarry Smith 
301d382aafbSBarry Smith .seealso: PetscUnlikely()
302d382aafbSBarry Smith M*/
303d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
304d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
305d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
306d382aafbSBarry Smith #else
307cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
308cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
309d382aafbSBarry Smith #endif
310d382aafbSBarry Smith 
311d382aafbSBarry Smith /*
312d382aafbSBarry Smith     Defines some elementary mathematics functions and constants.
313d382aafbSBarry Smith */
3142c8e378dSBarry Smith #include <petscmath.h>
315d382aafbSBarry Smith 
316d382aafbSBarry Smith /*
317d382aafbSBarry Smith     Declare extern C stuff after including external header files
318d382aafbSBarry Smith */
319d382aafbSBarry Smith 
320d382aafbSBarry Smith 
321d382aafbSBarry Smith /*
322d382aafbSBarry Smith        Basic PETSc constants
323d382aafbSBarry Smith */
324d382aafbSBarry Smith 
325d382aafbSBarry Smith /*E
326ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
327d382aafbSBarry Smith 
328d382aafbSBarry Smith    Level: beginner
329d382aafbSBarry Smith 
330ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
33134e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
33234e82e7dSBarry Smith 
333d382aafbSBarry Smith E*/
334ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
3356a6fc655SJed Brown PETSC_EXTERN const char *const PetscBools[];
3365a576424SJed Brown PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool);
33770b3c8c7SBarry Smith 
33870b3c8c7SBarry Smith /*E
33970b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
34070b3c8c7SBarry Smith 
34170b3c8c7SBarry Smith    Level: beginner
34270b3c8c7SBarry Smith 
34370b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
34470b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
34570b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
34670b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
34770b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
34870b3c8c7SBarry Smith 
34970b3c8c7SBarry Smith E*/
35070b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
3516a6fc655SJed Brown PETSC_EXTERN const char *const PetscCopyModes[];
352d382aafbSBarry Smith 
353d382aafbSBarry Smith /*MC
354ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
355d382aafbSBarry Smith 
356d382aafbSBarry Smith     Level: beginner
357d382aafbSBarry Smith 
358d382aafbSBarry Smith     Note: Zero integer
359d382aafbSBarry Smith 
360ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE
361d382aafbSBarry Smith M*/
362d382aafbSBarry Smith 
363d382aafbSBarry Smith /*MC
364ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
365d382aafbSBarry Smith 
366d382aafbSBarry Smith     Level: beginner
367d382aafbSBarry Smith 
368d382aafbSBarry Smith     Note: Nonzero integer
369d382aafbSBarry Smith 
370ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE
371d382aafbSBarry Smith M*/
372d382aafbSBarry Smith 
373d382aafbSBarry Smith /*MC
3740298fd71SBarry Smith     PETSC_NULL - standard way of passing in a null or array or pointer. This is deprecated in C/C++ simply use NULL
375d382aafbSBarry Smith 
376d382aafbSBarry Smith    Level: beginner
377d382aafbSBarry Smith 
378d382aafbSBarry Smith    Notes: accepted by many PETSc functions to not set a parameter and instead use
379d382aafbSBarry Smith           some default
380d382aafbSBarry Smith 
381d382aafbSBarry Smith           This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
382503cfb0cSBarry Smith           PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc
383d382aafbSBarry Smith 
384d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
385d382aafbSBarry Smith 
386d382aafbSBarry Smith M*/
3873bcbec90SJed Brown #define PETSC_NULL           NULL
388d382aafbSBarry Smith 
389d382aafbSBarry Smith /*MC
3900298fd71SBarry Smith     PETSC_IGNORE - same as NULL, means PETSc will ignore this argument
391d382aafbSBarry Smith 
392d382aafbSBarry Smith    Level: beginner
393d382aafbSBarry Smith 
394d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
395d382aafbSBarry Smith           some default
396d382aafbSBarry Smith 
397d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
398d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
399d382aafbSBarry Smith 
400d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
401d382aafbSBarry Smith 
402d382aafbSBarry Smith M*/
4030298fd71SBarry Smith #define PETSC_IGNORE         NULL
404d382aafbSBarry Smith 
405d382aafbSBarry Smith /*MC
406557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
407557d4da8SBarry Smith        where you wish PETSc to use the default.
408557d4da8SBarry Smith 
409557d4da8SBarry Smith    Level: beginner
410557d4da8SBarry Smith 
411557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
412557d4da8SBarry Smith 
413557d4da8SBarry Smith M*/
414557d4da8SBarry Smith #define PETSC_DECIDE  -1
415557d4da8SBarry Smith 
416557d4da8SBarry Smith /*MC
417d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
418d382aafbSBarry Smith        where you wish PETSc to compute the required value.
419d382aafbSBarry Smith 
420d382aafbSBarry Smith    Level: beginner
421d382aafbSBarry Smith 
422557d4da8SBarry Smith 
423557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
424557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
425557d4da8SBarry Smith 
4260298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes()
427d382aafbSBarry Smith 
428d382aafbSBarry Smith M*/
429d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
430d382aafbSBarry Smith 
431d382aafbSBarry Smith /*MC
432557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
433557d4da8SBarry Smith        where you wish PETSc to use the default.
434557d4da8SBarry Smith 
435557d4da8SBarry Smith    Level: beginner
436557d4da8SBarry Smith 
437557d4da8SBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION.
438557d4da8SBarry Smith 
4390298fd71SBarry Smith .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE
440557d4da8SBarry Smith 
441557d4da8SBarry Smith M*/
442557d4da8SBarry Smith #define PETSC_DEFAULT  -2
443557d4da8SBarry Smith 
444557d4da8SBarry Smith /*MC
445d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
446d382aafbSBarry Smith            all the processs that PETSc knows about.
447d382aafbSBarry Smith 
448d382aafbSBarry Smith    Level: beginner
449d382aafbSBarry Smith 
450d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
451d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
452d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
453d382aafbSBarry Smith           PetscInitialize()
454d382aafbSBarry Smith 
455d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
456d382aafbSBarry Smith 
457d382aafbSBarry Smith M*/
458014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD;
459d382aafbSBarry Smith 
460d382aafbSBarry Smith /*MC
461503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
462d382aafbSBarry Smith 
463d382aafbSBarry Smith    Level: beginner
464d382aafbSBarry Smith 
465d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
466d382aafbSBarry Smith 
467d382aafbSBarry Smith M*/
468d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
469d382aafbSBarry Smith 
470d6f2c3cbSBarry Smith PETSC_EXTERN PetscBool PetscBeganMPI;
471014dd563SJed Brown PETSC_EXTERN PetscBool PetscInitializeCalled;
472014dd563SJed Brown PETSC_EXTERN PetscBool PetscFinalizeCalled;
473014dd563SJed Brown PETSC_EXTERN PetscBool PetscCUSPSynchronize;
474d382aafbSBarry Smith 
475014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
476014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
477014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*);
478d382aafbSBarry Smith 
479d382aafbSBarry Smith /*MC
480d382aafbSBarry Smith    PetscMalloc - Allocates memory
481d382aafbSBarry Smith 
482eca87e8dSBarry Smith    Synopsis:
483f2ba6396SBarry Smith     #include "petscsys.h"
484eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
485eca87e8dSBarry Smith 
486eca87e8dSBarry Smith    Not Collective
487eca87e8dSBarry Smith 
488d382aafbSBarry Smith    Input Parameter:
489d382aafbSBarry Smith .  m - number of bytes to allocate
490d382aafbSBarry Smith 
491d382aafbSBarry Smith    Output Parameter:
492d382aafbSBarry Smith .  result - memory allocated
493d382aafbSBarry Smith 
494d382aafbSBarry Smith    Level: beginner
495d382aafbSBarry Smith 
496d382aafbSBarry Smith    Notes: Memory is always allocated at least double aligned
497d382aafbSBarry Smith 
498d382aafbSBarry Smith           If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will
499d382aafbSBarry Smith           properly handle not freeing the null pointer.
500d382aafbSBarry Smith 
501d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
502d382aafbSBarry Smith 
503d382aafbSBarry Smith   Concepts: memory allocation
504d382aafbSBarry Smith 
505d382aafbSBarry Smith M*/
5062714b66aSJed Brown #define PetscMalloc(a,b)  ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) )
507d382aafbSBarry Smith 
508d382aafbSBarry Smith /*MC
509503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
510d382aafbSBarry Smith 
511d382aafbSBarry Smith    Synopsis:
512f2ba6396SBarry Smith     #include "petscsys.h"
513d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
514d382aafbSBarry Smith 
515eca87e8dSBarry Smith    Not Collective
516eca87e8dSBarry Smith 
517eca87e8dSBarry Smith    Input Parameters:
518eca87e8dSBarry Smith .  addr - address to align (any pointer type)
519eca87e8dSBarry Smith 
520d382aafbSBarry Smith    Level: developer
521d382aafbSBarry Smith 
522d382aafbSBarry Smith .seealso: PetscMallocAlign()
523d382aafbSBarry Smith 
524d382aafbSBarry Smith   Concepts: memory allocation
525d382aafbSBarry Smith M*/
526d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
527d382aafbSBarry Smith 
528d382aafbSBarry Smith /*MC
529503cfb0cSBarry Smith    PetscMalloc2 - Allocates 2 chunks of  memory both aligned to PETSC_MEMALIGN
530d382aafbSBarry Smith 
531eca87e8dSBarry Smith    Synopsis:
532f2ba6396SBarry Smith     #include "petscsys.h"
533eca87e8dSBarry Smith    PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2)
534eca87e8dSBarry Smith 
535eca87e8dSBarry Smith    Not Collective
536eca87e8dSBarry Smith 
537d382aafbSBarry Smith    Input Parameter:
538d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
539d382aafbSBarry Smith .  t1 - type of first memory elements
540d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
541d382aafbSBarry Smith -  t2 - type of second memory elements
542d382aafbSBarry Smith 
543d382aafbSBarry Smith    Output Parameter:
544d382aafbSBarry Smith +  r1 - memory allocated in first chunk
545d382aafbSBarry Smith -  r2 - memory allocated in second chunk
546d382aafbSBarry Smith 
547d382aafbSBarry Smith    Level: developer
548d382aafbSBarry Smith 
549d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
550d382aafbSBarry Smith 
551d382aafbSBarry Smith   Concepts: memory allocation
552d382aafbSBarry Smith 
553d382aafbSBarry Smith M*/
554d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
555d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2))
556d382aafbSBarry Smith #else
5572981ebdbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0))
558d382aafbSBarry Smith #endif
559d382aafbSBarry Smith 
560d382aafbSBarry Smith /*MC
561503cfb0cSBarry Smith    PetscMalloc3 - Allocates 3 chunks of  memory  all aligned to PETSC_MEMALIGN
562d382aafbSBarry Smith 
563eca87e8dSBarry Smith    Synopsis:
564f2ba6396SBarry Smith     #include "petscsys.h"
565eca87e8dSBarry Smith    PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3)
566eca87e8dSBarry Smith 
567eca87e8dSBarry Smith    Not Collective
568eca87e8dSBarry Smith 
569d382aafbSBarry Smith    Input Parameter:
570d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
571d382aafbSBarry Smith .  t1 - type of first memory elements
572d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
573d382aafbSBarry Smith .  t2 - type of second memory elements
574d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
575d382aafbSBarry Smith -  t3 - type of third memory elements
576d382aafbSBarry Smith 
577d382aafbSBarry Smith    Output Parameter:
578d382aafbSBarry Smith +  r1 - memory allocated in first chunk
579d382aafbSBarry Smith .  r2 - memory allocated in second chunk
580d382aafbSBarry Smith -  r3 - memory allocated in third chunk
581d382aafbSBarry Smith 
582d382aafbSBarry Smith    Level: developer
583d382aafbSBarry Smith 
584d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3()
585d382aafbSBarry Smith 
586d382aafbSBarry Smith   Concepts: memory allocation
587d382aafbSBarry Smith 
588d382aafbSBarry Smith M*/
589d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
590d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3))
591d382aafbSBarry Smith #else
5923b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \
593d382aafbSBarry Smith                                                   || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0))
594d382aafbSBarry Smith #endif
595d382aafbSBarry Smith 
596d382aafbSBarry Smith /*MC
597503cfb0cSBarry Smith    PetscMalloc4 - Allocates 4 chunks of  memory  all aligned to PETSC_MEMALIGN
598d382aafbSBarry Smith 
599eca87e8dSBarry Smith    Synopsis:
600f2ba6396SBarry Smith     #include "petscsys.h"
601eca87e8dSBarry Smith    PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4)
602eca87e8dSBarry Smith 
603eca87e8dSBarry Smith    Not Collective
604eca87e8dSBarry Smith 
605d382aafbSBarry Smith    Input Parameter:
606d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
607d382aafbSBarry Smith .  t1 - type of first memory elements
608d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
609d382aafbSBarry Smith .  t2 - type of second memory elements
610d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
611d382aafbSBarry Smith .  t3 - type of third memory elements
612d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
613d382aafbSBarry Smith -  t4 - type of fourth memory elements
614d382aafbSBarry Smith 
615d382aafbSBarry Smith    Output Parameter:
616d382aafbSBarry Smith +  r1 - memory allocated in first chunk
617d382aafbSBarry Smith .  r2 - memory allocated in second chunk
618d382aafbSBarry Smith .  r3 - memory allocated in third chunk
619d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
620d382aafbSBarry Smith 
621d382aafbSBarry Smith    Level: developer
622d382aafbSBarry Smith 
623d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4()
624d382aafbSBarry Smith 
625d382aafbSBarry Smith   Concepts: memory allocation
626d382aafbSBarry Smith 
627d382aafbSBarry Smith M*/
628d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
629d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4))
630d382aafbSBarry Smith #else
631d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4)               \
6323b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \
633d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0))
634d382aafbSBarry Smith #endif
635d382aafbSBarry Smith 
636d382aafbSBarry Smith /*MC
637503cfb0cSBarry Smith    PetscMalloc5 - Allocates 5 chunks of  memory all aligned to PETSC_MEMALIGN
638d382aafbSBarry Smith 
639eca87e8dSBarry Smith    Synopsis:
640f2ba6396SBarry Smith     #include "petscsys.h"
641eca87e8dSBarry Smith    PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5)
642eca87e8dSBarry Smith 
643eca87e8dSBarry Smith    Not Collective
644eca87e8dSBarry Smith 
645d382aafbSBarry Smith    Input Parameter:
646d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
647d382aafbSBarry Smith .  t1 - type of first memory elements
648d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
649d382aafbSBarry Smith .  t2 - type of second memory elements
650d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
651d382aafbSBarry Smith .  t3 - type of third memory elements
652d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
653d382aafbSBarry Smith .  t4 - type of fourth memory elements
654d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
655d382aafbSBarry Smith -  t5 - type of fifth memory elements
656d382aafbSBarry Smith 
657d382aafbSBarry Smith    Output Parameter:
658d382aafbSBarry Smith +  r1 - memory allocated in first chunk
659d382aafbSBarry Smith .  r2 - memory allocated in second chunk
660d382aafbSBarry Smith .  r3 - memory allocated in third chunk
661d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
662d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
663d382aafbSBarry Smith 
664d382aafbSBarry Smith    Level: developer
665d382aafbSBarry Smith 
666d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5()
667d382aafbSBarry Smith 
668d382aafbSBarry Smith   Concepts: memory allocation
669d382aafbSBarry Smith 
670d382aafbSBarry Smith M*/
671d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
672d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5))
673d382aafbSBarry Smith #else
674d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5)      \
6753b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \
676d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0))
677d382aafbSBarry Smith #endif
678d382aafbSBarry Smith 
679d382aafbSBarry Smith 
680d382aafbSBarry Smith /*MC
681503cfb0cSBarry Smith    PetscMalloc6 - Allocates 6 chunks of  memory all aligned to PETSC_MEMALIGN
682d382aafbSBarry Smith 
683eca87e8dSBarry Smith    Synopsis:
684f2ba6396SBarry Smith     #include "petscsys.h"
685eca87e8dSBarry Smith    PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6)
686eca87e8dSBarry Smith 
687eca87e8dSBarry Smith    Not Collective
688eca87e8dSBarry Smith 
689d382aafbSBarry Smith    Input Parameter:
690d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
691d382aafbSBarry Smith .  t1 - type of first memory elements
692d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
693d382aafbSBarry Smith .  t2 - type of second memory elements
694d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
695d382aafbSBarry Smith .  t3 - type of third memory elements
696d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
697d382aafbSBarry Smith .  t4 - type of fourth memory elements
698d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
699d382aafbSBarry Smith .  t5 - type of fifth memory elements
700d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
701d382aafbSBarry Smith -  t6 - type of sixth memory elements
702d382aafbSBarry Smith 
703d382aafbSBarry Smith    Output Parameter:
704d382aafbSBarry Smith +  r1 - memory allocated in first chunk
705d382aafbSBarry Smith .  r2 - memory allocated in second chunk
706d382aafbSBarry Smith .  r3 - memory allocated in third chunk
707d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
708d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
709d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
710d382aafbSBarry Smith 
711d382aafbSBarry Smith    Level: developer
712d382aafbSBarry Smith 
713d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
714d382aafbSBarry Smith 
715d382aafbSBarry Smith   Concepts: memory allocation
716d382aafbSBarry Smith 
717d382aafbSBarry Smith M*/
718d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
719d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6))
720d382aafbSBarry Smith #else
721d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \
7223b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \
723d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0))
724d382aafbSBarry Smith #endif
725d382aafbSBarry Smith 
726d382aafbSBarry Smith /*MC
727503cfb0cSBarry Smith    PetscMalloc7 - Allocates 7 chunks of  memory all aligned to PETSC_MEMALIGN
728d382aafbSBarry Smith 
729eca87e8dSBarry Smith    Synopsis:
730f2ba6396SBarry Smith     #include "petscsys.h"
731eca87e8dSBarry Smith    PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7)
732eca87e8dSBarry Smith 
733eca87e8dSBarry Smith    Not Collective
734eca87e8dSBarry Smith 
735d382aafbSBarry Smith    Input Parameter:
736d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
737d382aafbSBarry Smith .  t1 - type of first memory elements
738d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
739d382aafbSBarry Smith .  t2 - type of second memory elements
740d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
741d382aafbSBarry Smith .  t3 - type of third memory elements
742d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
743d382aafbSBarry Smith .  t4 - type of fourth memory elements
744d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
745d382aafbSBarry Smith .  t5 - type of fifth memory elements
746d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
747d382aafbSBarry Smith .  t6 - type of sixth memory elements
748d382aafbSBarry Smith .  m7 - number of elements to allocate in 7th chunk  (may be zero)
749d382aafbSBarry Smith -  t7 - type of sixth memory elements
750d382aafbSBarry Smith 
751d382aafbSBarry Smith    Output Parameter:
752d382aafbSBarry Smith +  r1 - memory allocated in first chunk
753d382aafbSBarry Smith .  r2 - memory allocated in second chunk
754d382aafbSBarry Smith .  r3 - memory allocated in third chunk
755d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
756d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
757d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
758eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
759d382aafbSBarry Smith 
760d382aafbSBarry Smith    Level: developer
761d382aafbSBarry Smith 
762d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7()
763d382aafbSBarry Smith 
764d382aafbSBarry Smith   Concepts: memory allocation
765d382aafbSBarry Smith 
766d382aafbSBarry Smith M*/
767d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
768d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7))
769d382aafbSBarry Smith #else
770d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \
7713b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \
772d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0))
773d382aafbSBarry Smith #endif
774d382aafbSBarry Smith 
775d382aafbSBarry Smith /*MC
776503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
777d382aafbSBarry Smith 
778eca87e8dSBarry Smith    Synopsis:
779f2ba6396SBarry Smith     #include "petscsys.h"
780eca87e8dSBarry Smith    PetscErrorCode PetscNew(struct type,((type *))result)
781eca87e8dSBarry Smith 
782eca87e8dSBarry Smith    Not Collective
783eca87e8dSBarry Smith 
784d382aafbSBarry Smith    Input Parameter:
785d382aafbSBarry Smith .  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
786d382aafbSBarry Smith 
787d382aafbSBarry Smith    Output Parameter:
788d382aafbSBarry Smith .  result - memory allocated
789d382aafbSBarry Smith 
790d382aafbSBarry Smith    Level: beginner
791d382aafbSBarry Smith 
792ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog()
793d382aafbSBarry Smith 
794d382aafbSBarry Smith   Concepts: memory allocation
795d382aafbSBarry Smith 
796d382aafbSBarry Smith M*/
797d382aafbSBarry Smith #define PetscNew(A,b)      (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A)))
798ad0619ddSBarry Smith 
799ad0619ddSBarry Smith /*MC
800ad0619ddSBarry Smith    PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
801ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
802ad0619ddSBarry Smith 
803ad0619ddSBarry Smith    Synopsis:
804f2ba6396SBarry Smith     #include "petscsys.h"
805ad0619ddSBarry Smith    PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result)
806ad0619ddSBarry Smith 
807ad0619ddSBarry Smith    Not Collective
808ad0619ddSBarry Smith 
809ad0619ddSBarry Smith    Input Parameter:
810ad0619ddSBarry Smith +  obj - object memory is logged to
811ad0619ddSBarry Smith -  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
812ad0619ddSBarry Smith 
813ad0619ddSBarry Smith    Output Parameter:
814ad0619ddSBarry Smith .  result - memory allocated
815ad0619ddSBarry Smith 
816ad0619ddSBarry Smith    Level: developer
817ad0619ddSBarry Smith 
818ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory()
819ad0619ddSBarry Smith 
820ad0619ddSBarry Smith   Concepts: memory allocation
821ad0619ddSBarry Smith 
822ad0619ddSBarry Smith M*/
823d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0))
824d382aafbSBarry Smith 
825d382aafbSBarry Smith /*MC
826d382aafbSBarry Smith    PetscFree - Frees memory
827d382aafbSBarry Smith 
828eca87e8dSBarry Smith    Synopsis:
829f2ba6396SBarry Smith     #include "petscsys.h"
830eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
831eca87e8dSBarry Smith 
832eca87e8dSBarry Smith    Not Collective
833eca87e8dSBarry Smith 
834d382aafbSBarry Smith    Input Parameter:
835d382aafbSBarry Smith .   memory - memory to free (the pointer is ALWAYS set to 0 upon sucess)
836d382aafbSBarry Smith 
837d382aafbSBarry Smith    Level: beginner
838d382aafbSBarry Smith 
839d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscNew() or PetscMalloc()
840d382aafbSBarry Smith 
841d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid()
842d382aafbSBarry Smith 
843d382aafbSBarry Smith   Concepts: memory allocation
844d382aafbSBarry Smith 
845d382aafbSBarry Smith M*/
84612537b14SJed Brown #define PetscFree(a)   ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0)))
847d382aafbSBarry Smith 
848d382aafbSBarry Smith /*MC
849d382aafbSBarry Smith    PetscFreeVoid - Frees memory
850d382aafbSBarry Smith 
851d382aafbSBarry Smith    Synopsis:
852f2ba6396SBarry Smith     #include "petscsys.h"
853d382aafbSBarry Smith    void PetscFreeVoid(void *memory)
854d382aafbSBarry Smith 
855eca87e8dSBarry Smith    Not Collective
856eca87e8dSBarry Smith 
857eca87e8dSBarry Smith    Input Parameter:
858eca87e8dSBarry Smith .   memory - memory to free
859eca87e8dSBarry Smith 
860d382aafbSBarry Smith    Level: beginner
861d382aafbSBarry Smith 
862d382aafbSBarry Smith    Notes: This is different from PetscFree() in that no error code is returned
863d382aafbSBarry Smith 
864d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
865d382aafbSBarry Smith 
866d382aafbSBarry Smith   Concepts: memory allocation
867d382aafbSBarry Smith 
868d382aafbSBarry Smith M*/
8692714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0)
870d382aafbSBarry Smith 
871d382aafbSBarry Smith 
872d382aafbSBarry Smith /*MC
873d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
874d382aafbSBarry Smith 
875eca87e8dSBarry Smith    Synopsis:
876f2ba6396SBarry Smith     #include "petscsys.h"
877eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
878eca87e8dSBarry Smith 
879eca87e8dSBarry Smith    Not Collective
880eca87e8dSBarry Smith 
881d382aafbSBarry Smith    Input Parameter:
882d382aafbSBarry Smith +   memory1 - memory to free
883d382aafbSBarry Smith -   memory2 - 2nd memory to free
884d382aafbSBarry Smith 
885d382aafbSBarry Smith    Level: developer
886d382aafbSBarry Smith 
887d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
888d382aafbSBarry Smith 
889d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
890d382aafbSBarry Smith 
891d382aafbSBarry Smith   Concepts: memory allocation
892d382aafbSBarry Smith 
893d382aafbSBarry Smith M*/
894d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
895d382aafbSBarry Smith #define PetscFree2(m1,m2)   (PetscFree(m2) || PetscFree(m1))
896d382aafbSBarry Smith #else
89781dabb53SJed Brown #define PetscFree2(m1,m2)   ((m2)=0, PetscFree(m1))
898d382aafbSBarry Smith #endif
899d382aafbSBarry Smith 
900d382aafbSBarry Smith /*MC
901d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
902d382aafbSBarry Smith 
903eca87e8dSBarry Smith    Synopsis:
904f2ba6396SBarry Smith     #include "petscsys.h"
905eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
906eca87e8dSBarry Smith 
907eca87e8dSBarry Smith    Not Collective
908eca87e8dSBarry Smith 
909d382aafbSBarry Smith    Input Parameter:
910d382aafbSBarry Smith +   memory1 - memory to free
911d382aafbSBarry Smith .   memory2 - 2nd memory to free
912d382aafbSBarry Smith -   memory3 - 3rd memory to free
913d382aafbSBarry Smith 
914d382aafbSBarry Smith    Level: developer
915d382aafbSBarry Smith 
916d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
917d382aafbSBarry Smith 
918d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
919d382aafbSBarry Smith 
920d382aafbSBarry Smith   Concepts: memory allocation
921d382aafbSBarry Smith 
922d382aafbSBarry Smith M*/
923d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
924d382aafbSBarry Smith #define PetscFree3(m1,m2,m3)   (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
925d382aafbSBarry Smith #else
92681dabb53SJed Brown #define PetscFree3(m1,m2,m3)   ((m3)=0,(m2)=0,PetscFree(m1))
927d382aafbSBarry Smith #endif
928d382aafbSBarry Smith 
929d382aafbSBarry Smith /*MC
930d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
931d382aafbSBarry Smith 
932eca87e8dSBarry Smith    Synopsis:
933f2ba6396SBarry Smith     #include "petscsys.h"
934eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
935eca87e8dSBarry Smith 
936eca87e8dSBarry Smith    Not Collective
937eca87e8dSBarry Smith 
938d382aafbSBarry Smith    Input Parameter:
939d382aafbSBarry Smith +   m1 - memory to free
940d382aafbSBarry Smith .   m2 - 2nd memory to free
941d382aafbSBarry Smith .   m3 - 3rd memory to free
942d382aafbSBarry Smith -   m4 - 4th memory to free
943d382aafbSBarry Smith 
944d382aafbSBarry Smith    Level: developer
945d382aafbSBarry Smith 
946d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
947d382aafbSBarry Smith 
948d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
949d382aafbSBarry Smith 
950d382aafbSBarry Smith   Concepts: memory allocation
951d382aafbSBarry Smith 
952d382aafbSBarry Smith M*/
953d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
954d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4)   (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
955d382aafbSBarry Smith #else
95681dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4)   ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
957d382aafbSBarry Smith #endif
958d382aafbSBarry Smith 
959d382aafbSBarry Smith /*MC
960d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
961d382aafbSBarry Smith 
962eca87e8dSBarry Smith    Synopsis:
963f2ba6396SBarry Smith     #include "petscsys.h"
964eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
965eca87e8dSBarry Smith 
966eca87e8dSBarry Smith    Not Collective
967eca87e8dSBarry Smith 
968d382aafbSBarry Smith    Input Parameter:
969d382aafbSBarry Smith +   m1 - memory to free
970d382aafbSBarry Smith .   m2 - 2nd memory to free
971d382aafbSBarry Smith .   m3 - 3rd memory to free
972d382aafbSBarry Smith .   m4 - 4th memory to free
973d382aafbSBarry Smith -   m5 - 5th memory to free
974d382aafbSBarry Smith 
975d382aafbSBarry Smith    Level: developer
976d382aafbSBarry Smith 
977d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
978d382aafbSBarry Smith 
979d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
980d382aafbSBarry Smith 
981d382aafbSBarry Smith   Concepts: memory allocation
982d382aafbSBarry Smith 
983d382aafbSBarry Smith M*/
984d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
985d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5)   (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
986d382aafbSBarry Smith #else
98781dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
988d382aafbSBarry Smith #endif
989d382aafbSBarry Smith 
990d382aafbSBarry Smith 
991d382aafbSBarry Smith /*MC
992d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
993d382aafbSBarry Smith 
994eca87e8dSBarry Smith    Synopsis:
995f2ba6396SBarry Smith     #include "petscsys.h"
996eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
997eca87e8dSBarry Smith 
998eca87e8dSBarry Smith    Not Collective
999eca87e8dSBarry Smith 
1000d382aafbSBarry Smith    Input Parameter:
1001d382aafbSBarry Smith +   m1 - memory to free
1002d382aafbSBarry Smith .   m2 - 2nd memory to free
1003d382aafbSBarry Smith .   m3 - 3rd memory to free
1004d382aafbSBarry Smith .   m4 - 4th memory to free
1005d382aafbSBarry Smith .   m5 - 5th memory to free
1006d382aafbSBarry Smith -   m6 - 6th memory to free
1007d382aafbSBarry Smith 
1008d382aafbSBarry Smith 
1009d382aafbSBarry Smith    Level: developer
1010d382aafbSBarry Smith 
1011d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
1012d382aafbSBarry Smith 
1013d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
1014d382aafbSBarry Smith 
1015d382aafbSBarry Smith   Concepts: memory allocation
1016d382aafbSBarry Smith 
1017d382aafbSBarry Smith M*/
1018d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1019d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6)   (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1020d382aafbSBarry Smith #else
102181dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1022d382aafbSBarry Smith #endif
1023d382aafbSBarry Smith 
1024d382aafbSBarry Smith /*MC
1025d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
1026d382aafbSBarry Smith 
1027eca87e8dSBarry Smith    Synopsis:
1028f2ba6396SBarry Smith     #include "petscsys.h"
1029eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1030eca87e8dSBarry Smith 
1031eca87e8dSBarry Smith    Not Collective
1032eca87e8dSBarry Smith 
1033d382aafbSBarry Smith    Input Parameter:
1034d382aafbSBarry Smith +   m1 - memory to free
1035d382aafbSBarry Smith .   m2 - 2nd memory to free
1036d382aafbSBarry Smith .   m3 - 3rd memory to free
1037d382aafbSBarry Smith .   m4 - 4th memory to free
1038d382aafbSBarry Smith .   m5 - 5th memory to free
1039d382aafbSBarry Smith .   m6 - 6th memory to free
1040d382aafbSBarry Smith -   m7 - 7th memory to free
1041d382aafbSBarry Smith 
1042d382aafbSBarry Smith 
1043d382aafbSBarry Smith    Level: developer
1044d382aafbSBarry Smith 
1045d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1046d382aafbSBarry Smith 
1047d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1048d382aafbSBarry Smith           PetscMalloc7()
1049d382aafbSBarry Smith 
1050d382aafbSBarry Smith   Concepts: memory allocation
1051d382aafbSBarry Smith 
1052d382aafbSBarry Smith M*/
1053d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1054d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1055d382aafbSBarry Smith #else
105681dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1057d382aafbSBarry Smith #endif
1058d382aafbSBarry Smith 
1059014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);
1060014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);
1061014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[]));
1062014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocClear(void);
1063d382aafbSBarry Smith 
1064d382aafbSBarry Smith /*
1065a5057860SBarry Smith     PetscLogDouble variables are used to contain double precision numbers
1066a5057860SBarry Smith   that are not used in the numerical computations, but rather in logging,
1067a5057860SBarry Smith   timing etc.
1068a5057860SBarry Smith */
1069a5057860SBarry Smith typedef double PetscLogDouble;
1070a5057860SBarry Smith #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE
1071a5057860SBarry Smith 
1072a5057860SBarry Smith /*
107366d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc  memory allocation
1074d382aafbSBarry Smith */
1075014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *);
1076014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *);
1077014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *);
1078014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *);
1079014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool);
10800acecf5bSBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*);
1081014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[],const char[]);
1082014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void);
1083574034a9SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble);
1084014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*);
1085d382aafbSBarry Smith 
1086d382aafbSBarry Smith /*E
1087d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1088d382aafbSBarry Smith 
1089d382aafbSBarry Smith    Level: beginner
1090d382aafbSBarry Smith 
1091d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1092d382aafbSBarry Smith 
1093d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1094d382aafbSBarry Smith           PetscDataTypeGetSize()
1095d382aafbSBarry Smith 
1096d382aafbSBarry Smith E*/
1097d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
10982d53ad75SBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12} PetscDataType;
10996a6fc655SJed Brown PETSC_EXTERN const char *const PetscDataTypes[];
1100d382aafbSBarry Smith 
1101d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1102d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1103d382aafbSBarry Smith #else
1104ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1105d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
110659a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
110759a34000SBarry Smith #define  PETSC_SCALAR  PETSC___FLOAT128
1108d382aafbSBarry Smith #else
1109d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1110d382aafbSBarry Smith #endif
1111d382aafbSBarry Smith #endif
1112ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1113d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
111459a34000SBarry Smith #elif defined(PETSC_USE_REAL___FLOAT128)
111559a34000SBarry Smith #define  PETSC_REAL  PETSC___FLOAT128
1116d382aafbSBarry Smith #else
1117d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1118d382aafbSBarry Smith #endif
1119d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1120d382aafbSBarry Smith 
1121014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
1122014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
1123014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*);
1124*8e4b2d1dSBarry Smith PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*);
1125d382aafbSBarry Smith 
1126d382aafbSBarry Smith /*
1127d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1128d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1129d382aafbSBarry Smith    functionality and/or error checking.
1130d382aafbSBarry Smith */
1131014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
1132014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t);
1133014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
1134014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*);
1135d67fe73bSBarry Smith PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***);
1136014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **);
1137014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool  *);
1138014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool  *);
1139014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *);
1140014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *);
1141014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]);
1142014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]);
1143014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncat(char[],const char[],size_t);
1144014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t);
1145014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]);
1146014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]);
11472f234a98SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]);
1148014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]);
1149014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]);
1150014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]);
1151014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*);
11522c9581d2SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*);
1153014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
1154014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]);
115547340559SBarry Smith PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***);
11566fed8037SJed Brown PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***);
1157014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1158d382aafbSBarry Smith 
1159573b0fb4SBarry Smith PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool  *);
1160573b0fb4SBarry Smith 
1161d382aafbSBarry Smith /*S
1162d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1163d382aafbSBarry Smith 
1164d382aafbSBarry Smith   Level: intermediate
1165d382aafbSBarry Smith 
1166d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1167d382aafbSBarry Smith S*/
1168d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1169d382aafbSBarry Smith 
1170014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*);
1171014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]);
1172014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*);
1173d382aafbSBarry Smith 
1174a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*);
1175a53986e1SJed Brown PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*);
1176a53986e1SJed Brown 
1177d382aafbSBarry Smith /*
1178d382aafbSBarry Smith    These are  MPI operations for MPI_Allreduce() etc
1179d382aafbSBarry Smith */
1180014dd563SJed Brown PETSC_EXTERN MPI_Op PetscMaxSum_Op;
11817c2de775SJed Brown #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128)
1182014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_SUM;
11832414b3c7SJed Brown #else
11842414b3c7SJed Brown #define MPIU_SUM MPI_SUM
11852414b3c7SJed Brown #endif
11862414b3c7SJed Brown #if defined(PETSC_USE_REAL___FLOAT128)
1187014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MAX;
1188014dd563SJed Brown PETSC_EXTERN MPI_Op MPIU_MIN;
1189d9822059SBarry Smith #else
1190d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1191d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1192d9822059SBarry Smith #endif
1193014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1194d382aafbSBarry Smith 
1195014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1196014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1197eb3f98d2SBarry Smith 
1198d382aafbSBarry Smith /*S
1199d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1200d382aafbSBarry Smith 
1201d382aafbSBarry Smith    Level: beginner
1202d382aafbSBarry Smith 
12032981ebdbSBarry Smith    Note: This is the base class from which all PETSc objects are derived from.
1204d382aafbSBarry Smith 
12051890ba74SBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc()
1206d382aafbSBarry Smith S*/
1207d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1208d382aafbSBarry Smith 
1209d382aafbSBarry Smith /*S
1210140e18c1SBarry Smith      PetscFunctionList - Linked list of functions, possibly stored in dynamic libraries, accessed
1211d382aafbSBarry Smith       by string name
1212d382aafbSBarry Smith 
1213d382aafbSBarry Smith    Level: advanced
1214d382aafbSBarry Smith 
1215140e18c1SBarry Smith .seealso:  PetscFunctionListAdd(), PetscFunctionListDestroy(), PetscOpFlist
1216d382aafbSBarry Smith S*/
1217140e18c1SBarry Smith typedef struct _n_PetscFunctionList *PetscFunctionList;
1218d382aafbSBarry Smith 
1219d382aafbSBarry Smith /*E
1220d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1221d382aafbSBarry Smith 
1222d382aafbSBarry Smith   Level: beginner
1223d382aafbSBarry Smith 
1224d382aafbSBarry Smith   FILE_MODE_READ - open a file at its beginning for reading
1225d382aafbSBarry Smith 
1226d382aafbSBarry Smith   FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1227d382aafbSBarry Smith 
1228d382aafbSBarry Smith   FILE_MODE_APPEND - open a file at end for writing
1229d382aafbSBarry Smith 
1230d382aafbSBarry Smith   FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1231d382aafbSBarry Smith 
1232d382aafbSBarry Smith   FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1233d382aafbSBarry Smith 
1234d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1235d382aafbSBarry Smith E*/
1236d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1237d6a4318aSJed Brown extern const char *const PetscFileModes[];
1238d6a4318aSJed Brown 
1239639ff905SBarry Smith /*
1240639ff905SBarry Smith     Defines PETSc error handling.
1241639ff905SBarry Smith */
1242639ff905SBarry Smith #include <petscerror.h>
1243d382aafbSBarry Smith 
12440700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
1245014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID;
1246014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID;
1247014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1248d382aafbSBarry Smith 
1249d382aafbSBarry Smith /*
1250d382aafbSBarry Smith    Routines that get memory usage information from the OS
1251d382aafbSBarry Smith */
1252014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *);
1253014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *);
1254014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void);
1255d382aafbSBarry Smith 
1256014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []);
1257014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal);
1258d382aafbSBarry Smith 
1259d382aafbSBarry Smith /*
1260d382aafbSBarry Smith    Initialization of PETSc
1261d382aafbSBarry Smith */
1262014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]);
1263014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]);
1264014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void);
1265014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *);
1266014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *);
1267014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFinalize(void);
1268014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void);
1269014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***);
1270014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***);
1271014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **);
1272d382aafbSBarry Smith 
1273014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscEnd(void);
1274607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void);
1275d382aafbSBarry Smith 
1276014dd563SJed Brown PETSC_EXTERN MPI_Comm PETSC_COMM_LOCAL_WORLD;
1277014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*);
1278014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPISpawn(PetscMPIInt);
1279014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFinalize(void);
1280014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*);
1281014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*);
1282014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIFree(MPI_Comm,void*);
1283014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHMPIMalloc(MPI_Comm,size_t,void**);
1284d382aafbSBarry Smith 
1285014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]);
1286014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void);
1287014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void);
1288014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]);
1289d382aafbSBarry Smith 
1290d382aafbSBarry Smith /*
1291d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
12922981ebdbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be C++
1293d382aafbSBarry Smith */
1294638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void);
1295638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void);
1296638cfed1SJed Brown PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1297d382aafbSBarry Smith 
1298d382aafbSBarry Smith /*
1299d382aafbSBarry Smith     Functions that can act on any PETSc object.
1300d382aafbSBarry Smith */
1301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*);
1302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *);
1303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *);
1304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]);
1305014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []);
1306014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetPrecision(PetscObject,PetscPrecision);
1307014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]);
1308014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]);
1309014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]);
1310014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt);
1311014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*);
1312014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
1313014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject);
1314014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*);
1315014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject);
1316014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
1317014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject);
1318014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]);
1319014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *);
1320bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void));
1321bdf89e91SBarry Smith #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d))
1322014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject);
1323014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject);
1324014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
1325014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*);
1326014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectProcessOptionsHandlers(PetscObject);
1327014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectDestroyOptionsHandlers(PetscObject);
1328014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectsGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*);
1329d382aafbSBarry Smith 
1330665c2dedSJed Brown #include <petscviewertypes.h>
1331639ff905SBarry Smith #include <petscoptions.h>
1332639ff905SBarry Smith 
1333639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]);
1334639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]);
1335639ff905SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer);
13360005d66cSJed Brown #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr))
13370005d66cSJed Brown PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void));
1338014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]);
1339014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
1340014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
1341014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
1342014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]);
1343014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject);
1344014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void);
1345014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject);
1346014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *);
1347014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...);
1348014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void));
1349014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void);
1350d382aafbSBarry Smith 
1351ec7429eaSBarry Smith #if defined(PETSC_HAVE_AMS)
1352f05ece33SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectAMSViewOff(PetscObject);
1353b90c6cbeSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectAMSSetBlock(PetscObject,PetscBool);
1354b90c6cbeSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectAMSBlock(PetscObject);
1355ec7429eaSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectAMSGrantAccess(PetscObject);
1356ec7429eaSBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectAMSTakeAccess(PetscObject);
135715681b3cSBarry Smith PETSC_EXTERN void           PetscStackAMSGrantAccess(void);
135815681b3cSBarry Smith PETSC_EXTERN void           PetscStackAMSTakeAccess(void);
135915681b3cSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackViewAMS(void);
136015681b3cSBarry Smith PETSC_EXTERN PetscErrorCode PetscStackAMSViewOff(void);
136115681b3cSBarry Smith 
1362ec7429eaSBarry Smith #else
1363f05ece33SBarry Smith #define PetscObjectAMSViewOff(obj)             0
1364ec7429eaSBarry Smith #define PetscObjectAMSSetBlock(obj,flg)        0
1365ec7429eaSBarry Smith #define PetscObjectAMSBlock(obj)               0
1366ec7429eaSBarry Smith #define PetscObjectAMSGrantAccess(obj)         0
1367ec7429eaSBarry Smith #define PetscObjectAMSTakeAccess(obj)          0
136815681b3cSBarry Smith #define PetscStackViewAMS()                    0
136915681b3cSBarry Smith #define PetscStackAMSViewOff()                 0
137015681b3cSBarry Smith #define PetscStackAMSTakeAccess()
137115681b3cSBarry Smith #define PetscStackAMSGrantAccess()
137215681b3cSBarry Smith 
1373ec7429eaSBarry Smith #endif
1374b90c6cbeSBarry Smith 
13757d5d4d99SBarry Smith typedef void* PetscDLHandle;
1376e4d177b5SBarry Smith typedef enum {PETSC_DL_DECIDE=0,PETSC_DL_NOW=1,PETSC_DL_LOCAL=2} PetscDLMode;
137782b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *);
137882b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *);
137982b97d80SJed Brown PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **);
13807d5d4d99SBarry Smith 
1381d382aafbSBarry Smith 
13825fe58b6fSBarry Smith #if defined(PETSC_USE_DEBUG)
1383a64a8e02SBarry Smith PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**);
13845fe58b6fSBarry Smith #endif
13857eb1d149SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool);
1386a64a8e02SBarry Smith 
1387d382aafbSBarry Smith /*S
1388140e18c1SBarry Smith      PetscObjectList - Linked list of PETSc objects, each accessable by string name
1389d382aafbSBarry Smith 
13901d0fab5eSBarry Smith    Level: developer
1391d382aafbSBarry Smith 
13921d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
13931d0fab5eSBarry Smith 
1394140e18c1SBarry Smith .seealso:  PetscObjectListAdd(), PetscObjectListDestroy(), PetscObjectListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFunctionList
1395d382aafbSBarry Smith S*/
1396140e18c1SBarry Smith typedef struct _n_PetscObjectList *PetscObjectList;
1397d382aafbSBarry Smith 
1398140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*);
1399140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*);
1400140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*);
1401140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject);
1402140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]);
1403140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *);
1404d382aafbSBarry Smith 
1405d382aafbSBarry Smith /*
1406503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1407d382aafbSBarry Smith   link libraries that will be loaded as needed.
1408d382aafbSBarry Smith */
1409a240a19fSJed Brown 
1410a240a19fSJed Brown #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr))
1411a240a19fSJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void));
1412140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*);
14131c9cd337SJed Brown #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr))
14141c9cd337SJed Brown PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void));
1415140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[]);
1416140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *);
1417140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer);
1418140e18c1SBarry Smith PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*);
1419d382aafbSBarry Smith 
1420d382aafbSBarry Smith /*S
1421d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1422d382aafbSBarry Smith 
1423d382aafbSBarry Smith    Level: advanced
1424d382aafbSBarry Smith 
142520de1f94SBarry Smith    --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries
1426d382aafbSBarry Smith 
1427d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1428d382aafbSBarry Smith S*/
1429d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
1430014dd563SJed Brown PETSC_EXTERN PetscDLLibrary  PetscDLLibrariesLoaded;
1431014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
1432014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
1433014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
1434014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary);
1435014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
1436014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
1437014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary);
1438d382aafbSBarry Smith 
1439d382aafbSBarry Smith /*
1440d382aafbSBarry Smith      Useful utility routines
1441d382aafbSBarry Smith */
1442014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
1443014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
1444014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1445014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1446014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject);
1447014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*);
1448d382aafbSBarry Smith 
1449503cfb0cSBarry Smith /*
1450ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1451503cfb0cSBarry Smith 
1452503cfb0cSBarry Smith     Notes: This is useful in cases like
1453503cfb0cSBarry Smith $     int        *a;
1454ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
1455ace3abfcSBarry Smith      where !a does not return a PetscBool  because we cannot provide a cast from int to PetscBool  in C.
1456503cfb0cSBarry Smith */
1457d382aafbSBarry Smith #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1458503cfb0cSBarry Smith 
1459cae2f346SBarry Smith #if defined(PETSC_HAVE_VALGRIND)
1460cae2f346SBarry Smith #  include <valgrind/valgrind.h>
1461cae2f346SBarry Smith #  define PETSC_RUNNING_ON_VALGRIND RUNNING_ON_VALGRIND
1462cae2f346SBarry Smith #else
1463cae2f346SBarry Smith #  define PETSC_RUNNING_ON_VALGRIND PETSC_FALSE
1464cae2f346SBarry Smith #endif
1465cae2f346SBarry Smith 
1466238ccf28SShri Abhyankar 
1467d382aafbSBarry Smith /*MC
1468d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1469d382aafbSBarry Smith 
1470d382aafbSBarry Smith    Synopsis:
1471f2ba6396SBarry Smith     #include "petscsys.h"
1472d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1473d382aafbSBarry Smith 
1474eca87e8dSBarry Smith     Not Collective
1475eca87e8dSBarry Smith 
1476d382aafbSBarry Smith     Input Parameters:
1477d382aafbSBarry Smith .   format - the usual printf() format string
1478d382aafbSBarry Smith 
1479d382aafbSBarry Smith    Level: developer
1480d382aafbSBarry Smith 
1481d382aafbSBarry Smith     Fortran Note:
1482d382aafbSBarry Smith     This routine is not supported in Fortran.
1483d382aafbSBarry Smith 
1484d382aafbSBarry Smith     Concepts: help messages^printing
1485d382aafbSBarry Smith     Concepts: printing^help messages
1486d382aafbSBarry Smith 
1487d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1488d382aafbSBarry Smith M*/
1489014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1490d382aafbSBarry Smith 
1491fcfd50ebSBarry Smith /*
1492fcfd50ebSBarry Smith      Defines PETSc profiling.
1493fcfd50ebSBarry Smith */
14942c8e378dSBarry Smith #include <petsclog.h>
1495fcfd50ebSBarry Smith 
1496b90c6cbeSBarry Smith 
1497fcfd50ebSBarry Smith 
1498fcfd50ebSBarry Smith /*
1499fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1500fcfd50ebSBarry Smith */
1501014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]);
1502014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1503014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*);
1504014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1505014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...);
1506014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...);
1507014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...);
1508fcfd50ebSBarry Smith 
1509fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/
1510fcfd50ebSBarry Smith #include <stdarg.h>
1511014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
1512014dd563SJed Brown PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list);
1513014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintfDefault(FILE*,const char[],va_list);
1514fcfd50ebSBarry Smith 
1515fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE)
1516014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscVFPrintf_Matlab(FILE*,const char[],va_list);
1517fcfd50ebSBarry Smith #endif
1518fcfd50ebSBarry Smith 
1519014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...);
1520014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...);
1521014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1522d382aafbSBarry Smith 
1523d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
1524014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
1525784ad74dSJed Brown PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*,PetscInt*);
1526d382aafbSBarry Smith #endif
1527d382aafbSBarry Smith 
1528014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...);
1529014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
1530014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm);
1531014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
1532014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
1533014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
1534014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]);
1535d382aafbSBarry Smith 
1536014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1537d382aafbSBarry Smith 
1538d382aafbSBarry Smith /*S
1539d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1540d382aafbSBarry Smith 
1541d382aafbSBarry Smith    Level: advanced
1542d382aafbSBarry Smith 
1543d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1544d382aafbSBarry Smith S*/
1545014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID;
1546d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
1547014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **);
1548014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *);
1549014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*);
1550014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *);
1551014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1552d382aafbSBarry Smith 
1553d382aafbSBarry Smith /*
1554d382aafbSBarry Smith    For use in debuggers
1555d382aafbSBarry Smith */
1556014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalRank;
1557014dd563SJed Brown PETSC_EXTERN PetscMPIInt PetscGlobalSize;
1558014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer);
1559014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer);
1560014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1561d382aafbSBarry Smith 
1562a663daf8SBarry Smith #include <stddef.h>
1563d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H)
1564d382aafbSBarry Smith #include <memory.h>
1565d382aafbSBarry Smith #endif
1566d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1567d382aafbSBarry Smith #include <stdlib.h>
1568d382aafbSBarry Smith #endif
15696c7e564aSBarry Smith 
15704a92a979SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__)
1571d382aafbSBarry Smith #include <xmmintrin.h>
1572d382aafbSBarry Smith #endif
1573d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H)
1574d382aafbSBarry Smith #include <stdint.h>
1575d382aafbSBarry Smith #endif
1576d382aafbSBarry Smith 
1577fcfd50ebSBarry Smith #undef __FUNCT__
1578fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy"
1579d382aafbSBarry Smith /*@C
1580d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1581d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1582d382aafbSBarry Smith    PetscMemmove() in that case.
1583d382aafbSBarry Smith 
1584d382aafbSBarry Smith    Not Collective
1585d382aafbSBarry Smith 
1586d382aafbSBarry Smith    Input Parameters:
1587d382aafbSBarry Smith +  b - pointer to initial memory space
1588d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1589d382aafbSBarry Smith 
1590d382aafbSBarry Smith    Output Parameter:
1591d382aafbSBarry Smith .  a - pointer to copy space
1592d382aafbSBarry Smith 
1593d382aafbSBarry Smith    Level: intermediate
1594d382aafbSBarry Smith 
1595d382aafbSBarry Smith    Compile Option:
1596d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1597d382aafbSBarry Smith                                   for memory copies on double precision values.
1598d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1599d382aafbSBarry Smith                                   for memory copies on double precision values.
1600d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1601d382aafbSBarry Smith                                   for memory copies on double precision values.
1602d382aafbSBarry Smith 
1603d382aafbSBarry Smith    Note:
1604d382aafbSBarry Smith    This routine is analogous to memcpy().
1605d382aafbSBarry Smith 
1606503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1607503cfb0cSBarry Smith 
1608d382aafbSBarry Smith   Concepts: memory^copying
1609d382aafbSBarry Smith   Concepts: copying^memory
1610d382aafbSBarry Smith 
1611d382aafbSBarry Smith .seealso: PetscMemmove()
1612d382aafbSBarry Smith 
1613d382aafbSBarry Smith @*/
16147087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n)
1615d382aafbSBarry Smith {
1616d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1617d382aafbSBarry Smith   unsigned long al = (unsigned long) a,bl = (unsigned long) b;
1618d382aafbSBarry Smith   unsigned long nl = (unsigned long) n;
1619a7e36092SMatthew G Knepley   PetscFunctionBegin;
1620e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1621e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1622a7e36092SMatthew G Knepley #else
1623d382aafbSBarry Smith   PetscFunctionBegin;
1624a7e36092SMatthew G Knepley #endif
1625d382aafbSBarry Smith   if (a != b) {
1626d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1627e47d2de2SBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl)  SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1628d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1629d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1630d382aafbSBarry Smith #endif
1631d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1632d382aafbSBarry Smith    if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1633d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1634d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1635c5df96a5SBarry Smith       PetscBLASInt   one = 1,blen;
1636c5df96a5SBarry Smith       PetscErrorCode ierr;
1637c5df96a5SBarry Smith       ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr);
16388b83055fSJed Brown       PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one));
1639d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1640d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1641d382aafbSBarry Smith #else
1642d382aafbSBarry Smith       size_t      i;
1643d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1644d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1645d382aafbSBarry Smith #endif
1646d382aafbSBarry Smith     } else {
1647d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1648d382aafbSBarry Smith     }
1649d382aafbSBarry Smith #else
1650d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1651d382aafbSBarry Smith #endif
1652d382aafbSBarry Smith   }
1653d382aafbSBarry Smith   PetscFunctionReturn(0);
1654d382aafbSBarry Smith }
1655d382aafbSBarry Smith 
1656d382aafbSBarry Smith /*@C
1657d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1658d382aafbSBarry Smith 
1659d382aafbSBarry Smith    Not Collective
1660d382aafbSBarry Smith 
1661d382aafbSBarry Smith    Input Parameters:
1662d382aafbSBarry Smith +  a - pointer to beginning memory location
1663d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1664d382aafbSBarry Smith 
1665d382aafbSBarry Smith    Level: intermediate
1666d382aafbSBarry Smith 
1667d382aafbSBarry Smith    Compile Option:
1668d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1669d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1670d382aafbSBarry Smith 
1671503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1672503cfb0cSBarry Smith 
1673d382aafbSBarry Smith    Concepts: memory^zeroing
1674d382aafbSBarry Smith    Concepts: zeroing^memory
1675d382aafbSBarry Smith 
1676d382aafbSBarry Smith .seealso: PetscMemcpy()
1677d382aafbSBarry Smith @*/
16787087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1679d382aafbSBarry Smith {
1680d382aafbSBarry Smith   if (n > 0) {
1681d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1682e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1683d382aafbSBarry Smith #endif
1684d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1685d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1686d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1687d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1688d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1689d382aafbSBarry Smith     } else {
1690d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1691d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1692d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1693d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1694d382aafbSBarry Smith     } else {
1695d382aafbSBarry Smith #endif
1696d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1697d382aafbSBarry Smith       bzero((char *)a,n);
1698d382aafbSBarry Smith #else
1699d382aafbSBarry Smith       memset((char*)a,0,n);
1700d382aafbSBarry Smith #endif
1701d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1702d382aafbSBarry Smith     }
1703d382aafbSBarry Smith #endif
1704d382aafbSBarry Smith   }
1705d382aafbSBarry Smith   return 0;
1706d382aafbSBarry Smith }
1707d382aafbSBarry Smith 
1708d382aafbSBarry Smith /*MC
1709d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1710d382aafbSBarry Smith 
1711eca87e8dSBarry Smith    Synopsis:
1712f2ba6396SBarry Smith     #include "petscsys.h"
1713eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1714eca87e8dSBarry Smith 
1715d382aafbSBarry Smith    Not Collective
1716d382aafbSBarry Smith 
1717d382aafbSBarry Smith    Input Parameters:
1718d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1719d382aafbSBarry Smith .  n - number of elements to fetch
1720d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
172150d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1722d382aafbSBarry Smith 
1723d382aafbSBarry Smith    Level: developer
1724d382aafbSBarry Smith 
1725d382aafbSBarry Smith    Notes:
1726d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1727d382aafbSBarry Smith 
172850d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
172950d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
173050d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
173163cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
173263cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
173363cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1734d382aafbSBarry Smith 
1735d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1736d382aafbSBarry Smith    address).
1737d382aafbSBarry Smith 
1738d382aafbSBarry Smith    Concepts: memory
1739d382aafbSBarry Smith M*/
1740d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1741d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1742d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1743d382aafbSBarry Smith   } while (0)
1744d382aafbSBarry Smith 
1745d382aafbSBarry Smith /*
1746d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1747d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1748d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1749d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1750e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1751d382aafbSBarry Smith */
1752d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1753d382aafbSBarry Smith 
1754d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1755d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1756d382aafbSBarry Smith #endif
1757d382aafbSBarry Smith 
17585a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
17595a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1760d382aafbSBarry Smith #endif
1761d382aafbSBarry Smith 
1762d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1763d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1764d382aafbSBarry Smith #endif
1765d382aafbSBarry Smith 
1766d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1767d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1768d382aafbSBarry Smith #endif
1769d382aafbSBarry Smith 
1770d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1771d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1772d382aafbSBarry Smith #endif
1773d382aafbSBarry Smith 
1774d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1775d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1776d382aafbSBarry Smith #endif
1777d382aafbSBarry Smith 
1778d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1779d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1780d382aafbSBarry Smith #endif
1781d382aafbSBarry Smith 
1782d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1783d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1784d382aafbSBarry Smith #endif
1785d382aafbSBarry Smith 
1786d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1787d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1788d382aafbSBarry Smith #endif
1789d382aafbSBarry Smith 
1790d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1791d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1792d382aafbSBarry Smith #endif
1793d382aafbSBarry Smith 
1794d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1795d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1796d382aafbSBarry Smith #endif
1797d382aafbSBarry Smith 
1798d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1799d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1800d382aafbSBarry Smith #endif
1801d382aafbSBarry Smith 
1802d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1803d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1804d382aafbSBarry Smith #endif
1805d382aafbSBarry Smith 
1806d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1807d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1808d382aafbSBarry Smith #endif
1809d382aafbSBarry Smith 
1810d382aafbSBarry Smith #endif
1811d382aafbSBarry Smith 
1812d382aafbSBarry Smith /*
1813d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1814d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1815d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1816d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
1817d382aafbSBarry Smith    ugly extern "C" {} wrappers.
1818d382aafbSBarry Smith */
1819d382aafbSBarry Smith #if defined(__cplusplus)
1820d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
1821d382aafbSBarry Smith #define EXTERN_C_END }
1822d382aafbSBarry Smith #else
1823d382aafbSBarry Smith #define EXTERN_C_BEGIN
1824d382aafbSBarry Smith #define EXTERN_C_END
1825d382aafbSBarry Smith #endif
1826d382aafbSBarry Smith 
1827d382aafbSBarry Smith /* --------------------------------------------------------------------*/
1828d382aafbSBarry Smith 
1829d382aafbSBarry Smith /*MC
1830d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
1831d382aafbSBarry Smith         communication
1832d382aafbSBarry Smith 
1833d382aafbSBarry Smith    Level: beginner
1834d382aafbSBarry Smith 
1835d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
1836d382aafbSBarry Smith 
1837d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
1838d382aafbSBarry Smith M*/
1839d382aafbSBarry Smith 
1840d382aafbSBarry Smith /*MC
1841d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
1842d382aafbSBarry Smith        complex number, a single precision real number, a long double or an int - if the code is configured
1843d382aafbSBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle
1844d382aafbSBarry Smith 
1845d382aafbSBarry Smith 
1846d382aafbSBarry Smith    Level: beginner
1847d382aafbSBarry Smith 
1848d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt
1849d382aafbSBarry Smith M*/
1850d382aafbSBarry Smith 
1851d382aafbSBarry Smith /*MC
18528619c96cSJed Brown     PetscComplex - PETSc type that represents a complex number with precision matching that of PetscReal.
18538619c96cSJed Brown 
18548619c96cSJed Brown    Synopsis:
18558619c96cSJed Brown    #define PETSC_DESIRE_COMPLEX
18568619c96cSJed Brown    #include <petscsys.h>
18578619c96cSJed Brown    PetscComplex number = 1. + 2.*PETSC_i;
18588619c96cSJed Brown 
18598619c96cSJed Brown    Level: beginner
18608619c96cSJed Brown 
18618619c96cSJed Brown    Note:
18628619c96cSJed Brown    Complex numbers are automatically available if PETSc was configured --with-scalar-type=complex (in which case
18638619c96cSJed Brown    PetscComplex will match PetscScalar), otherwise the macro PETSC_DESIRE_COMPLEX must be defined before including any
18648619c96cSJed Brown    PETSc headers. If the compiler supports complex numbers, PetscComplex and associated variables and functions will be
18658619c96cSJed Brown    defined and PETSC_HAVE_COMPLEX will be set.
18668619c96cSJed Brown 
18678619c96cSJed Brown .seealso: PetscReal, PetscComplex, MPIU_COMPLEX, PetscInt, PETSC_i
18688619c96cSJed Brown M*/
18698619c96cSJed Brown 
18708619c96cSJed Brown /*MC
1871d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
1872d382aafbSBarry Smith 
1873d382aafbSBarry Smith    Level: beginner
1874d382aafbSBarry Smith 
1875d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar
1876d382aafbSBarry Smith M*/
1877d382aafbSBarry Smith 
1878d382aafbSBarry Smith /*MC
1879d382aafbSBarry Smith     PassiveScalar - PETSc type that represents a PetscScalar
1880d382aafbSBarry Smith    Level: beginner
1881d382aafbSBarry Smith 
1882d382aafbSBarry Smith     This is the same as a PetscScalar except in code that is automatically differentiated it is
1883d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1884d382aafbSBarry Smith 
1885d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar
1886d382aafbSBarry Smith M*/
1887d382aafbSBarry Smith 
1888d382aafbSBarry Smith /*MC
1889d382aafbSBarry Smith     PassiveReal - PETSc type that represents a PetscReal
1890d382aafbSBarry Smith 
1891d382aafbSBarry Smith    Level: beginner
1892d382aafbSBarry Smith 
1893d382aafbSBarry Smith     This is the same as a PetscReal except in code that is automatically differentiated it is
1894d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
1895d382aafbSBarry Smith 
1896d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar
1897d382aafbSBarry Smith M*/
1898d382aafbSBarry Smith 
1899d382aafbSBarry Smith /*MC
1900d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
1901d382aafbSBarry Smith 
1902d382aafbSBarry Smith    Level: beginner
1903d382aafbSBarry Smith 
1904d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
1905d382aafbSBarry Smith           pass this value
1906d382aafbSBarry Smith 
1907d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT
1908d382aafbSBarry Smith M*/
1909d382aafbSBarry Smith 
1910d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
1911d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
1912014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
1913014dd563SJed Brown PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
1914d382aafbSBarry Smith #else
1915d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
1916d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
1917d382aafbSBarry Smith #endif
1918d382aafbSBarry Smith #endif
1919d382aafbSBarry Smith 
1920d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
1921d382aafbSBarry Smith 
1922d382aafbSBarry Smith /* Limit MPI to 32-bits */
1923d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
1924d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
1925d382aafbSBarry Smith /* Limit BLAS to 32-bits */
1926d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
1927d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
1928d382aafbSBarry Smith 
1929c5df96a5SBarry Smith #undef __FUNCT__
1930c5df96a5SBarry Smith #define __FUNCT__ "PetscBLASIntCast"
1931c5df96a5SBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b)
1932c5df96a5SBarry Smith {
1933c5df96a5SBarry Smith   PetscFunctionBegin;
1934c5df96a5SBarry Smith #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES)
1935c5df96a5SBarry Smith   if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK");
1936c5df96a5SBarry Smith #endif
1937c5df96a5SBarry Smith   *b =  (PetscBLASInt)(a);
1938c5df96a5SBarry Smith   PetscFunctionReturn(0);
1939c5df96a5SBarry Smith }
1940c5df96a5SBarry Smith 
19414dc2109aSBarry Smith #undef __FUNCT__
19424dc2109aSBarry Smith #define __FUNCT__ "PetscMPIIntCast"
19434dc2109aSBarry Smith PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b)
19444dc2109aSBarry Smith {
19454dc2109aSBarry Smith   PetscFunctionBegin;
19464dc2109aSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
19474dc2109aSBarry Smith   if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI");
19484dc2109aSBarry Smith #endif
19494dc2109aSBarry Smith   *b =  (PetscMPIInt)(a);
19504dc2109aSBarry Smith   PetscFunctionReturn(0);
19514dc2109aSBarry Smith }
19524dc2109aSBarry Smith 
1953c5df96a5SBarry Smith 
1954d382aafbSBarry Smith /*
19552981ebdbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used as a regular user variable.
1956d382aafbSBarry Smith */
1957d382aafbSBarry Smith #if defined(hz)
1958d382aafbSBarry Smith #undef hz
1959d382aafbSBarry Smith #endif
1960d382aafbSBarry Smith 
1961d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
1962d382aafbSBarry Smith 
1963d382aafbSBarry Smith 
1964d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
1965d382aafbSBarry Smith #include <limits.h>
1966d382aafbSBarry Smith #endif
1967d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
1968d382aafbSBarry Smith #include <sys/param.h>
1969d382aafbSBarry Smith #endif
1970d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
1971d382aafbSBarry Smith #include <sys/types.h>
1972d382aafbSBarry Smith #endif
1973d382aafbSBarry Smith #if defined(MAXPATHLEN)
1974d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
1975d382aafbSBarry Smith #elif defined(MAX_PATH)
1976d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
1977d382aafbSBarry Smith #elif defined(_MAX_PATH)
1978d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
1979d382aafbSBarry Smith #else
1980d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
1981d382aafbSBarry Smith #endif
1982d382aafbSBarry Smith 
1983d382aafbSBarry Smith /* Special support for C++ */
19842c280183SJed Brown #if defined(PETSC_CLANGUAGE_CXX) && defined(__cplusplus)
19852c8e378dSBarry Smith #include <petscsys.hh>
19862c8e378dSBarry Smith #endif
19876c7e564aSBarry Smith 
1988d382aafbSBarry Smith /*MC
1989d382aafbSBarry Smith 
1990d382aafbSBarry Smith     UsingFortran - Fortran can be used with PETSc in four distinct approaches
1991d382aafbSBarry Smith 
1992d382aafbSBarry Smith $    1) classic Fortran 77 style
1993d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc
1994d382aafbSBarry Smith $       XXX variablename
1995d382aafbSBarry Smith $      You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines
1996d382aafbSBarry Smith $      which end in F90; such as VecGetArrayF90()
1997d382aafbSBarry Smith $
1998d382aafbSBarry Smith $    2) classic Fortran 90 style
1999d1716517SSatish Balay $#include "finclude/petscXXX.h"
2000d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc
2001d382aafbSBarry Smith $       XXX variablename
2002d382aafbSBarry Smith $
2003d382aafbSBarry Smith $    3) Using Fortran modules
2004d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2005d382aafbSBarry Smith $         use petscXXXX
2006d382aafbSBarry Smith $       XXX variablename
2007d382aafbSBarry Smith $
2008d382aafbSBarry Smith $    4) Use Fortran modules and Fortran data types for PETSc types
2009d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2010d382aafbSBarry Smith $         use petscXXXX
2011d382aafbSBarry Smith $       type(XXX) variablename
2012e2e64c6bSBarry Smith $      To use this approach you must ./configure PETSc with the additional
2013d382aafbSBarry Smith $      option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules
2014d382aafbSBarry Smith 
2015d382aafbSBarry Smith     Finally if you absolutely do not want to use any #include you can use either
2016d382aafbSBarry Smith 
2017d382aafbSBarry Smith $    3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc
2018d382aafbSBarry Smith $        and you must declare the variables as integer, for example
2019d382aafbSBarry Smith $        integer variablename
2020d382aafbSBarry Smith $
2021d382aafbSBarry Smith $    4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type
2022d382aafbSBarry Smith $        names like PetscErrorCode, PetscInt etc. again for those you must use integer
2023d382aafbSBarry Smith 
2024d382aafbSBarry Smith    We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking
2025d382aafbSBarry Smith for only a few PETSc functions.
2026d382aafbSBarry Smith 
2027d382aafbSBarry Smith    Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value
2028d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues()
2029d382aafbSBarry Smith you cannot have something like
2030d382aafbSBarry Smith $      PetscInt row,col
2031d382aafbSBarry Smith $      PetscScalar val
2032d382aafbSBarry Smith $        ...
2033d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2034d382aafbSBarry Smith You must instead have
2035d382aafbSBarry Smith $      PetscInt row(1),col(1)
2036d382aafbSBarry Smith $      PetscScalar val(1)
2037d382aafbSBarry Smith $        ...
2038d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2039d382aafbSBarry Smith 
2040d382aafbSBarry Smith 
2041d382aafbSBarry Smith     See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches
2042d382aafbSBarry Smith 
2043d382aafbSBarry Smith     Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these
2044d382aafbSBarry Smith      automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h
2045d382aafbSBarry Smith 
2046d382aafbSBarry Smith      The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include
2047d382aafbSBarry Smith      their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors;  for example
2048d382aafbSBarry Smith      finclude/petscvec.h does NOT automatically include finclude/petscis.h
2049d382aafbSBarry Smith 
2050d382aafbSBarry Smith      The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the
2051e2e64c6bSBarry Smith      Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option.
2052d382aafbSBarry Smith 
2053d382aafbSBarry Smith      The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for
2054d382aafbSBarry Smith      the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90).
2055d382aafbSBarry Smith 
2056d382aafbSBarry Smith      The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated
2057d382aafbSBarry Smith      automatically by "make allfortranstubs".
2058d382aafbSBarry Smith 
2059e2e64c6bSBarry Smith      The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure
2060d382aafbSBarry Smith      was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
2061d382aafbSBarry Smith      include their predecessors
2062d382aafbSBarry Smith 
2063d382aafbSBarry Smith     Level: beginner
2064d382aafbSBarry Smith 
2065d382aafbSBarry Smith M*/
2066d382aafbSBarry Smith 
2067014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t);
2068014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t);
2069014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t);
2070014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t);
2071014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]);
2072014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t);
207327710113SBarry Smith PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t);
2074d382aafbSBarry Smith 
2075014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]);
2076014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
207760e03357SMatthew G Knepley PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*);
2078014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
2079014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
2080014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
2081014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*);
208217d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]);
208317d7d925SStefano Zampini PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]);
2084014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
2085014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
2086014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]);
2087014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
2088014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
2089014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
2090014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
2091014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**);
2092d382aafbSBarry Smith 
2093014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDisplay(void);
2094014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t);
2095d382aafbSBarry Smith 
209676bdecfbSBarry Smith /*J
2097d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2098d382aafbSBarry Smith 
2099d382aafbSBarry Smith    Level: beginner
2100d382aafbSBarry Smith 
2101e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2102d382aafbSBarry Smith    with the option --download-sprng
2103d382aafbSBarry Smith 
21048f6c3df8SBarry Smith .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate()
210576bdecfbSBarry Smith J*/
210619fd82e9SBarry Smith typedef const char* PetscRandomType;
2107d382aafbSBarry Smith #define PETSCRAND       "rand"
2108d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2109d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2110d382aafbSBarry Smith 
2111d382aafbSBarry Smith /* Logging support */
2112014dd563SJed Brown PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID;
2113d382aafbSBarry Smith 
2114607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void);
2115d382aafbSBarry Smith 
2116d382aafbSBarry Smith /*S
2117d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2118d382aafbSBarry Smith 
2119d382aafbSBarry Smith    Level: intermediate
2120d382aafbSBarry Smith 
2121d382aafbSBarry Smith   Concepts: random numbers
2122d382aafbSBarry Smith 
2123d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2124d382aafbSBarry Smith S*/
2125d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2126d382aafbSBarry Smith 
2127d382aafbSBarry Smith /* Dynamic creation and loading functions */
2128140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList PetscRandomList;
2129014dd563SJed Brown PETSC_EXTERN PetscBool         PetscRandomRegisterAllCalled;
2130d382aafbSBarry Smith 
2131607a6623SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegisterAll(void);
2132bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom));
213319fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType);
2134014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom);
213519fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*);
2136146574abSBarry Smith  PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,const char[],const char[]);
2137014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer);
2138d382aafbSBarry Smith 
2139014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*);
2140014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*);
2141014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*);
2142014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
2143014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
2144014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long);
2145014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *);
2146014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom);
2147014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*);
2148d382aafbSBarry Smith 
2149014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t);
2150014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t);
2151014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t);
2152014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]);
2153014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t);
2154014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *);
2155014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *);
2156d382aafbSBarry Smith 
2157014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscDataType);
2158014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
2159014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
2160014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
2161014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *);
2162014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinaryClose(int);
2163014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool  *);
2164014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
2165014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t);
2166014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
2167014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
2168014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscOpenSocket(char*,int,int*);
2169014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscWebServe(MPI_Comm,int);
2170d382aafbSBarry Smith 
2171d382aafbSBarry Smith /*
2172d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2173d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2174d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2175d382aafbSBarry Smith   PetscBinarySeek().
2176d382aafbSBarry Smith */
2177d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2178d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2179d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2180d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2181d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2182d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2183d382aafbSBarry Smith 
2184d382aafbSBarry Smith /*E
2185d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2186d382aafbSBarry Smith 
2187d382aafbSBarry Smith   Level: advanced
2188d382aafbSBarry Smith 
2189d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2190d382aafbSBarry Smith E*/
2191d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
2192014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
2193014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
2194014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt);
2195d382aafbSBarry Smith 
2196014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]);
2197014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool );
2198014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void);
2199014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*);
2200014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void);
2201014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void);
2202d382aafbSBarry Smith 
2203014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
2204014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
2205014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
2206014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
2207014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2208f6ced4a3SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscInt,const PetscMPIInt*,const void*,PetscInt*,PetscMPIInt**,void*) PetscAttrMPIPointerWithType(6,3);
2209d382aafbSBarry Smith 
22106145cd65SJed Brown /*E
22116145cd65SJed Brown     PetscBuildTwoSidedType - algorithm for setting up two-sided communication
22126145cd65SJed Brown 
22136145cd65SJed Brown $  PETSC_BUILDTWOSIDED_ALLREDUCE - classical algorithm using an MPI_Allreduce with
22146145cd65SJed Brown $      a buffer of length equal to the communicator size. Not memory-scalable due to
22156145cd65SJed Brown $      the large reduction size. Requires only MPI-1.
22166145cd65SJed Brown $  PETSC_BUILDTWOSIDED_IBARRIER - nonblocking algorithm based on MPI_Issend and MPI_Ibarrier.
22176145cd65SJed Brown $      Proved communication-optimal in Hoefler, Siebert, and Lumsdaine (2010). Requires MPI-3.
22186145cd65SJed Brown 
22196145cd65SJed Brown    Level: developer
22206145cd65SJed Brown 
22216145cd65SJed Brown .seealso: PetscCommBuildTwoSided(), PetscCommBuildTwoSidedSetType(), PetscCommBuildTwoSidedGetType()
22226145cd65SJed Brown E*/
22236145cd65SJed Brown typedef enum {
22246145cd65SJed Brown   PETSC_BUILDTWOSIDED_NOTSET = -1,
22256145cd65SJed Brown   PETSC_BUILDTWOSIDED_ALLREDUCE = 0,
22266145cd65SJed Brown   PETSC_BUILDTWOSIDED_IBARRIER = 1
22276145cd65SJed Brown   /* Updates here must be accompanied by updates in finclude/petscsys.h and the string array in mpits.c */
22286145cd65SJed Brown } PetscBuildTwoSidedType;
22296145cd65SJed Brown PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[];
22306145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType);
22316145cd65SJed Brown PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*);
22326145cd65SJed Brown 
2233014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2234d382aafbSBarry Smith 
2235d382aafbSBarry Smith /*E
2236d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2237d382aafbSBarry Smith 
2238d382aafbSBarry Smith   Level: beginner
2239d382aafbSBarry Smith 
2240d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2241d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2242d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2243d382aafbSBarry Smith E*/
22446fbadbe2SMatthew G Knepley  typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode;
2245d382aafbSBarry Smith 
2246d382aafbSBarry Smith /*MC
2247d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2248d382aafbSBarry Smith 
2249d382aafbSBarry Smith     Level: beginner
2250d382aafbSBarry Smith 
2251d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2252eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2253eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2254d382aafbSBarry Smith 
2255d382aafbSBarry Smith M*/
2256d382aafbSBarry Smith 
2257d382aafbSBarry Smith /*MC
2258d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2259d382aafbSBarry Smith                 value into that location
2260d382aafbSBarry Smith 
2261d382aafbSBarry Smith     Level: beginner
2262d382aafbSBarry Smith 
2263d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2264eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2265eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2266d382aafbSBarry Smith 
2267d382aafbSBarry Smith M*/
2268d382aafbSBarry Smith 
2269d382aafbSBarry Smith /*MC
2270d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2271d382aafbSBarry Smith 
2272d382aafbSBarry Smith     Level: beginner
2273d382aafbSBarry Smith 
2274d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2275d382aafbSBarry Smith 
2276d382aafbSBarry Smith M*/
2277d382aafbSBarry Smith 
2278ce94432eSBarry Smith PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject);
2279ce94432eSBarry Smith 
2280d382aafbSBarry Smith /*S
2281d382aafbSBarry Smith    PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT
2282d382aafbSBarry Smith 
2283d382aafbSBarry Smith    Level: advanced
2284d382aafbSBarry Smith 
2285d382aafbSBarry Smith    Concepts: communicator, create
2286d382aafbSBarry Smith S*/
2287d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2288d382aafbSBarry Smith 
2289d382aafbSBarry Smith struct _n_PetscSubcomm {
2290d382aafbSBarry Smith   MPI_Comm   parent;      /* parent communicator */
2291d382aafbSBarry Smith   MPI_Comm   dupparent;   /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2292d382aafbSBarry Smith   MPI_Comm   comm;        /* this communicator */
2293d382aafbSBarry Smith   PetscInt   n;           /* num of subcommunicators under the parent communicator */
2294d382aafbSBarry Smith   PetscInt   color;       /* color of processors belong to this communicator */
2295d382aafbSBarry Smith };
2296d382aafbSBarry Smith 
2297638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
22986a6fc655SJed Brown PETSC_EXTERN const char *const PetscSubcommTypes[];
2299638faf0bSHong Zhang 
2300014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2301014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*);
2302014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt);
2303014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType);
2304014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt);
2305d382aafbSBarry Smith 
23060f453b92SJed Brown /*S
23070f453b92SJed Brown    PetscSegBuffer - a segmented extendable buffer
23080f453b92SJed Brown 
23090f453b92SJed Brown    Level: developer
23100f453b92SJed Brown 
23110f453b92SJed Brown .seealso: PetscSegBufferCreate(), PetscSegBufferGet(), PetscSegBufferExtract(), PetscSegBufferDestroy()
23120f453b92SJed Brown S*/
23130f453b92SJed Brown typedef struct _n_PetscSegBuffer *PetscSegBuffer;
231413e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*);
23150f453b92SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*);
231613e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*);
2317137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*);
2318137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*);
2319137cf7b6SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*);
232013e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*);
232113e3f751SJed Brown PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t);
23220f453b92SJed Brown 
2323471ecdacSJed Brown /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling
2324471ecdacSJed Brown  * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as
2325471ecdacSJed Brown  * possible. */
2326f4f617ceSJed Brown PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,PetscInt count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);}
2327d382aafbSBarry Smith 
2328d382aafbSBarry Smith /* Reset __FUNCT__ in case the user does not define it themselves */
2329d382aafbSBarry Smith #undef __FUNCT__
2330d382aafbSBarry Smith #define __FUNCT__ "User provided function"
2331d382aafbSBarry Smith 
2332d382aafbSBarry Smith #endif
2333