xref: /petsc/include/petscsys.h (revision bfec8eec0a0d4f04d4f33e2b82a3ad5fb0818d23)
1d382aafbSBarry Smith /*
2d382aafbSBarry Smith    This is the main PETSc include file (for C and C++).  It is included by all
3d382aafbSBarry Smith    other PETSc include files, so it almost never has to be specifically included.
4d382aafbSBarry Smith */
56c7e564aSBarry Smith #if !defined(__PETSCSYS_H)
66c7e564aSBarry Smith #define __PETSCSYS_H
7d382aafbSBarry Smith /* ========================================================================== */
8d382aafbSBarry Smith /*
9d382aafbSBarry Smith    petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10d382aafbSBarry Smith    found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include
11d382aafbSBarry Smith    in the conf/variables definition of PETSC_INCLUDE
12d382aafbSBarry Smith */
13d382aafbSBarry Smith #include "petscconf.h"
14d382aafbSBarry Smith #include "petscfix.h"
15d382aafbSBarry Smith 
16d382aafbSBarry Smith /* ========================================================================== */
17d382aafbSBarry Smith /*
18d382aafbSBarry Smith    This facilitates using C version of PETSc from C++ and
19e2e64c6bSBarry Smith    C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter)
20d382aafbSBarry Smith */
21d382aafbSBarry Smith #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus)
22d382aafbSBarry Smith #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler"
23d382aafbSBarry Smith #endif
241ec50b02SJed Brown 
251ec50b02SJed Brown #if defined(__cplusplus)
261ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
271ec50b02SJed Brown #else
281ec50b02SJed Brown #  define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
291ec50b02SJed Brown #endif
30d382aafbSBarry Smith 
31d382aafbSBarry Smith #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
32d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN extern "C" {
33d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END  }
34d382aafbSBarry Smith #else
35d382aafbSBarry Smith #define PETSC_EXTERN_CXX_BEGIN
36d382aafbSBarry Smith #define PETSC_EXTERN_CXX_END
37d382aafbSBarry Smith #endif
38d382aafbSBarry Smith /* ========================================================================== */
39d382aafbSBarry Smith /*
40d382aafbSBarry Smith    Current PETSc version number and release date. Also listed in
41d382aafbSBarry Smith     Web page
42d382aafbSBarry Smith     src/docs/tex/manual/intro.tex,
43d382aafbSBarry Smith     src/docs/tex/manual/manual.tex.
44d382aafbSBarry Smith     src/docs/website/index.html.
45d382aafbSBarry Smith */
46d382aafbSBarry Smith #include "petscversion.h"
47301d30feSBarry Smith #define PETSC_AUTHOR_INFO        "       The PETSc Team\n    petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
48d382aafbSBarry Smith #if (PETSC_VERSION_RELEASE == 1)
49301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \
50d382aafbSBarry Smith                                          PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \
51301d30feSBarry Smith 					 PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE)
52d382aafbSBarry Smith #else
53301d30feSBarry Smith #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s  HG Date: %s", \
54301d30feSBarry Smith                                         PETSC_VERSION_HG, PETSC_VERSION_DATE_HG)
55d382aafbSBarry Smith #endif
56d382aafbSBarry Smith 
57d382aafbSBarry Smith /*MC
58d382aafbSBarry Smith     PetscGetVersion - Gets the PETSc version information in a string.
59d382aafbSBarry Smith 
60d382aafbSBarry Smith     Input Parameter:
61d382aafbSBarry Smith .   len - length of the string
62d382aafbSBarry Smith 
63d382aafbSBarry Smith     Output Parameter:
64d382aafbSBarry Smith .   version - version string
65d382aafbSBarry Smith 
66d382aafbSBarry Smith     Level: developer
67d382aafbSBarry Smith 
68d382aafbSBarry Smith     Usage:
69d382aafbSBarry Smith     char version[256];
70d382aafbSBarry Smith     ierr = PetscGetVersion(version,256);CHKERRQ(ierr)
71d382aafbSBarry Smith 
72d382aafbSBarry Smith     Fortran Note:
73d382aafbSBarry Smith     This routine is not supported in Fortran.
74d382aafbSBarry Smith 
75d382aafbSBarry Smith .seealso: PetscGetProgramName()
76d382aafbSBarry Smith 
77d382aafbSBarry Smith M*/
78d382aafbSBarry Smith 
79d382aafbSBarry Smith /* ========================================================================== */
80d382aafbSBarry Smith 
81d382aafbSBarry Smith /*
82d382aafbSBarry Smith     Defines the interface to MPI allowing the use of all MPI functions.
83d382aafbSBarry Smith 
84d382aafbSBarry Smith     PETSc does not use the C++ binding of MPI at ALL. The following flag
85d382aafbSBarry Smith     makes sure the C++ bindings are not included. The C++ bindings REQUIRE
86d382aafbSBarry Smith     putting mpi.h before ANY C++ include files, we cannot control this
87d382aafbSBarry Smith     with all PETSc users. Users who want to use the MPI C++ bindings can include
88d382aafbSBarry Smith     mpicxx.h directly in their code
89d382aafbSBarry Smith */
90d382aafbSBarry Smith #define MPICH_SKIP_MPICXX 1
91d382aafbSBarry Smith #define OMPI_SKIP_MPICXX 1
92d382aafbSBarry Smith #include "mpi.h"
9365013866SBarry Smith 
94d382aafbSBarry Smith /*
95d382aafbSBarry Smith     Yuck, we need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
96d382aafbSBarry Smith     see the top of mpicxx.h in the MPICH2 distribution.
97d382aafbSBarry Smith 
98d382aafbSBarry Smith     The MPI STANDARD HAS TO BE CHANGED to prevent this nonsense.
99d382aafbSBarry Smith */
100d382aafbSBarry Smith #include <stdio.h>
101d382aafbSBarry Smith 
102d382aafbSBarry Smith /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
103d382aafbSBarry Smith #if !defined(MPIAPI)
104d382aafbSBarry Smith #define MPIAPI
105d382aafbSBarry Smith #endif
106d382aafbSBarry Smith 
107b3506946SBarry Smith 
108d382aafbSBarry Smith /*MC
109d382aafbSBarry Smith     PetscErrorCode - datatype used for return error code from all PETSc functions
110d382aafbSBarry Smith 
111d382aafbSBarry Smith     Level: beginner
112d382aafbSBarry Smith 
113d382aafbSBarry Smith .seealso: CHKERRQ, SETERRQ
114d382aafbSBarry Smith M*/
115d382aafbSBarry Smith typedef int PetscErrorCode;
116d382aafbSBarry Smith 
117d382aafbSBarry Smith /*MC
118d382aafbSBarry Smith 
119503cfb0cSBarry Smith     PetscClassId - A unique id used to identify each PETSc class.
120d382aafbSBarry Smith          (internal integer in the data structure used for error
121d382aafbSBarry Smith          checking). These are all defined by an offset from the lowest
1220700a824SBarry Smith          one, PETSC_SMALLEST_CLASSID.
123d382aafbSBarry Smith 
124d382aafbSBarry Smith     Level: advanced
125d382aafbSBarry Smith 
1260700a824SBarry Smith .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
127d382aafbSBarry Smith M*/
1280700a824SBarry Smith typedef int PetscClassId;
129d382aafbSBarry Smith 
130d382aafbSBarry Smith 
131d382aafbSBarry Smith /*MC
132d382aafbSBarry Smith     PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
133d382aafbSBarry Smith 
134d382aafbSBarry Smith     Level: intermediate
135d382aafbSBarry Smith 
136d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1373b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
138287e6e24SBarry Smith            (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
1393b2a8c54SBarry Smith 
1403b2a8c54SBarry Smith     PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a
1413b2a8c54SBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
1423b2a8c54SBarry Smith 
1433b2a8c54SBarry Smith     PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
1443b2a8c54SBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
145d382aafbSBarry Smith 
146287e6e24SBarry Smith     Developer Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
147287e6e24SBarry Smith      if you run ./configure with the option
148287e6e24SBarry Smith      --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
149287e6e24SBarry Smith      for example, you can change the int below to long int. Since MATLAB uses the MKL (Intel Math Libraries) it is likely one can
150287e6e24SBarry Smith      purchase a 64 bit integer version of the MKL and use that with a  PetscBLASInt of long int.
151287e6e24SBarry Smith 
152287e6e24SBarry Smith      External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
153287e6e24SBarry Smith      be used with PETSc if you have set PetscBLASInt to long int.
154287e6e24SBarry Smith 
155d382aafbSBarry Smith .seealso: PetscMPIInt, PetscInt
156d382aafbSBarry Smith 
157d382aafbSBarry Smith M*/
158d382aafbSBarry Smith typedef int PetscBLASInt;
159d382aafbSBarry Smith 
160d382aafbSBarry Smith /*MC
161d382aafbSBarry Smith     PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
162d382aafbSBarry Smith 
163d382aafbSBarry Smith     Level: intermediate
164d382aafbSBarry Smith 
165d382aafbSBarry Smith     Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
1663b2a8c54SBarry Smith            standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
167d382aafbSBarry Smith 
1683b2a8c54SBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
169d382aafbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
170d382aafbSBarry Smith 
1713b2a8c54SBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
172d382aafbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
173d382aafbSBarry Smith 
174d382aafbSBarry Smith .seealso: PetscBLASInt, PetscInt
175d382aafbSBarry Smith 
176d382aafbSBarry Smith M*/
177d382aafbSBarry Smith typedef int PetscMPIInt;
178d382aafbSBarry Smith 
179d382aafbSBarry Smith /*MC
180d382aafbSBarry Smith     PetscEnum - datatype used to pass enum types within PETSc functions.
181d382aafbSBarry Smith 
182d382aafbSBarry Smith     Level: intermediate
183d382aafbSBarry Smith 
184d382aafbSBarry Smith     PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a
185d382aafbSBarry Smith       PETSC_ERR_ARG_OUTOFRANGE.
186d382aafbSBarry Smith 
187d382aafbSBarry Smith     PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
188d382aafbSBarry Smith       generates a PETSC_ERR_ARG_OUTOFRANGE
189d382aafbSBarry Smith 
190d382aafbSBarry Smith .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
191d382aafbSBarry Smith M*/
192d382aafbSBarry Smith typedef enum { ENUM_DUMMY } PetscEnum;
193d382aafbSBarry Smith 
194d382aafbSBarry Smith /*MC
195d382aafbSBarry Smith     PetscInt - PETSc type that represents integer - used primarily to
1963b2a8c54SBarry Smith       represent size of arrays and indexing into arrays. Its size can be configured with the option
197d382aafbSBarry Smith       --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints]
198d382aafbSBarry Smith 
199d382aafbSBarry Smith    Level: intermediate
200d382aafbSBarry Smith 
201d382aafbSBarry Smith .seealso: PetscScalar, PetscBLASInt, PetscMPIInt
202d382aafbSBarry Smith M*/
203d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
204d382aafbSBarry Smith typedef long long PetscInt;
205d382aafbSBarry Smith #define MPIU_INT MPI_LONG_LONG_INT
206d382aafbSBarry Smith #else
207d382aafbSBarry Smith typedef int PetscInt;
208d382aafbSBarry Smith #define MPIU_INT MPI_INT
209d382aafbSBarry Smith #endif
210d382aafbSBarry Smith 
21158b60935SBarry Smith /*EC
21258b60935SBarry Smith 
21358b60935SBarry Smith     PetscPrecision - indicates what precision the object is using
21458b60935SBarry Smith 
21558b60935SBarry Smith     Level: advanced
21658b60935SBarry Smith 
21758b60935SBarry Smith .seealso: PetscObjectSetPrecision()
21858b60935SBarry Smith E*/
21958b60935SBarry Smith typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;
22058b60935SBarry Smith extern const char *PetscPrecisions[];
22158b60935SBarry Smith 
22258b60935SBarry Smith 
223503cfb0cSBarry Smith /*
224503cfb0cSBarry Smith     For the rare cases when one needs to send a size_t object with MPI
225503cfb0cSBarry Smith */
226d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
227d382aafbSBarry Smith #define MPIU_SIZE_T MPI_INT
228d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
229d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG
230d382aafbSBarry Smith #elif  (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
231d382aafbSBarry Smith #define MPIU_SIZE_T MPI_LONG_LONG_INT
232d382aafbSBarry Smith #else
233d382aafbSBarry Smith #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
234d382aafbSBarry Smith #endif
235d382aafbSBarry Smith 
236d382aafbSBarry Smith 
237d382aafbSBarry Smith /*
238d382aafbSBarry Smith       You can use PETSC_STDOUT as a replacement of stdout. You can also change
239d382aafbSBarry Smith     the value of PETSC_STDOUT to redirect all standard output elsewhere
240d382aafbSBarry Smith */
241d382aafbSBarry Smith 
242d382aafbSBarry Smith extern FILE* PETSC_STDOUT;
243d382aafbSBarry Smith 
244d382aafbSBarry Smith /*
245d382aafbSBarry Smith       You can use PETSC_STDERR as a replacement of stderr. You can also change
246d382aafbSBarry Smith     the value of PETSC_STDERR to redirect all standard error elsewhere
247d382aafbSBarry Smith */
248d382aafbSBarry Smith extern FILE* PETSC_STDERR;
249d382aafbSBarry Smith 
250d382aafbSBarry Smith /*
251d382aafbSBarry Smith       PETSC_ZOPEFD is used to send data to the PETSc webpage.  It can be used
252d382aafbSBarry Smith     in conjunction with PETSC_STDOUT, or by itself.
253d382aafbSBarry Smith */
254d382aafbSBarry Smith extern FILE* PETSC_ZOPEFD;
255d382aafbSBarry Smith 
256d382aafbSBarry Smith #if !defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus)
257d382aafbSBarry Smith /*MC
258d382aafbSBarry Smith       PetscPolymorphicSubroutine - allows defining a C++ polymorphic version of
259d382aafbSBarry Smith             a PETSc function that remove certain optional arguments for a simplier user interface
260d382aafbSBarry Smith 
261d382aafbSBarry Smith    Synopsis:
262d382aafbSBarry Smith    PetscPolymorphicSubroutine(Functionname,(arguments of C++ function),(arguments of C function))
263d382aafbSBarry Smith 
264eca87e8dSBarry Smith      Not collective
265eca87e8dSBarry Smith 
266d382aafbSBarry Smith    Level: developer
267d382aafbSBarry Smith 
268d382aafbSBarry Smith     Example:
269d382aafbSBarry Smith       PetscPolymorphicSubroutine(VecNorm,(Vec x,PetscReal *r),(x,NORM_2,r)) generates the new routine
270d382aafbSBarry Smith            PetscErrorCode VecNorm(Vec x,PetscReal *r) = VecNorm(x,NORM_2,r)
271d382aafbSBarry Smith 
272d382aafbSBarry Smith .seealso: PetscPolymorphicFunction()
273d382aafbSBarry Smith 
274d382aafbSBarry Smith M*/
275d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {return A C;}
276d382aafbSBarry Smith 
277d382aafbSBarry Smith /*MC
278d382aafbSBarry Smith       PetscPolymorphicScalar - allows defining a C++ polymorphic version of
279d382aafbSBarry Smith             a PETSc function that replaces a PetscScalar * argument with a PetscScalar argument
280d382aafbSBarry Smith 
281d382aafbSBarry Smith    Synopsis:
282d382aafbSBarry Smith    PetscPolymorphicScalar(Functionname,(arguments of C++ function),(arguments of C function))
283d382aafbSBarry Smith 
284eca87e8dSBarry Smith    Not collective
285eca87e8dSBarry Smith 
286d382aafbSBarry Smith    Level: developer
287d382aafbSBarry Smith 
288d382aafbSBarry Smith     Example:
289d382aafbSBarry Smith       PetscPolymorphicScalar(VecAXPY,(PetscScalar _val,Vec x,Vec y),(&_Val,x,y)) generates the new routine
290d382aafbSBarry Smith            PetscErrorCode VecAXPY(PetscScalar _val,Vec x,Vec y) = {PetscScalar _Val = _val; return VecAXPY(&_Val,x,y);}
291d382aafbSBarry Smith 
292d382aafbSBarry Smith .seealso: PetscPolymorphicFunction(),PetscPolymorphicSubroutine()
293d382aafbSBarry Smith 
294d382aafbSBarry Smith M*/
295d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C) PETSC_STATIC_INLINE PetscErrorCode A B {PetscScalar _Val = _val; return A C;}
296d382aafbSBarry Smith 
297d382aafbSBarry Smith /*MC
298d382aafbSBarry Smith       PetscPolymorphicFunction - allows defining a C++ polymorphic version of
299d382aafbSBarry Smith             a PETSc function that remove certain optional arguments for a simplier user interface
300d382aafbSBarry Smith             and returns the computed value (istead of an error code)
301d382aafbSBarry Smith 
302d382aafbSBarry Smith    Synopsis:
303d382aafbSBarry Smith    PetscPolymorphicFunction(Functionname,(arguments of C++ function),(arguments of C function),return type,return variable name)
304d382aafbSBarry Smith 
305eca87e8dSBarry Smith      Not collective
306eca87e8dSBarry Smith 
307d382aafbSBarry Smith    Level: developer
308d382aafbSBarry Smith 
309d382aafbSBarry Smith     Example:
310d382aafbSBarry Smith       PetscPolymorphicFunction(VecNorm,(Vec x,NormType t),(x,t,&r),PetscReal,r) generates the new routine
311d382aafbSBarry Smith          PetscReal VecNorm(Vec x,NormType t) = {PetscReal r; VecNorm(x,t,&r); return r;}
312d382aafbSBarry Smith 
313d382aafbSBarry Smith .seealso: PetscPolymorphicSubroutine()
314d382aafbSBarry Smith 
315d382aafbSBarry Smith M*/
316d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E) PETSC_STATIC_INLINE D A B {D E; A C;return E;}
317d382aafbSBarry Smith 
318d382aafbSBarry Smith #else
319d382aafbSBarry Smith #define PetscPolymorphicSubroutine(A,B,C)
320d382aafbSBarry Smith #define PetscPolymorphicScalar(A,B,C)
321d382aafbSBarry Smith #define PetscPolymorphicFunction(A,B,C,D,E)
322d382aafbSBarry Smith #endif
323d382aafbSBarry Smith 
324d382aafbSBarry Smith /*MC
325d382aafbSBarry Smith     PetscUnlikely - hints the compiler that the given condition is usually FALSE
326d382aafbSBarry Smith 
327d382aafbSBarry Smith     Synopsis:
328ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
329d382aafbSBarry Smith 
330eca87e8dSBarry Smith     Not Collective
331eca87e8dSBarry Smith 
332d382aafbSBarry Smith     Input Parameters:
333d382aafbSBarry Smith .   cond - condition or expression
334d382aafbSBarry Smith 
335d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
336d382aafbSBarry Smith     branch is unlikely.
337d382aafbSBarry Smith 
338d382aafbSBarry Smith     Level: advanced
339d382aafbSBarry Smith 
340d382aafbSBarry Smith .seealso: PetscLikely(), CHKERRQ
341d382aafbSBarry Smith M*/
342d382aafbSBarry Smith 
343d382aafbSBarry Smith /*MC
344d382aafbSBarry Smith     PetscLikely - hints the compiler that the given condition is usually TRUE
345d382aafbSBarry Smith 
346d382aafbSBarry Smith     Synopsis:
347ace3abfcSBarry Smith     PetscBool  PetscUnlikely(PetscBool  cond)
348d382aafbSBarry Smith 
349eca87e8dSBarry Smith     Not Collective
350eca87e8dSBarry Smith 
351d382aafbSBarry Smith     Input Parameters:
352d382aafbSBarry Smith .   cond - condition or expression
353d382aafbSBarry Smith 
354d382aafbSBarry Smith     Note: This returns the same truth value, it is only a hint to compilers that the resulting
355d382aafbSBarry Smith     branch is likely.
356d382aafbSBarry Smith 
357d382aafbSBarry Smith     Level: advanced
358d382aafbSBarry Smith 
359d382aafbSBarry Smith .seealso: PetscUnlikely()
360d382aafbSBarry Smith M*/
361d382aafbSBarry Smith #if defined(PETSC_HAVE_BUILTIN_EXPECT)
362d382aafbSBarry Smith #  define PetscUnlikely(cond)   __builtin_expect(!!(cond),0)
363d382aafbSBarry Smith #  define PetscLikely(cond)     __builtin_expect(!!(cond),1)
364d382aafbSBarry Smith #else
365cd3f4ce9SJed Brown #  define PetscUnlikely(cond)   (cond)
366cd3f4ce9SJed Brown #  define PetscLikely(cond)     (cond)
367d382aafbSBarry Smith #endif
368d382aafbSBarry Smith 
369d382aafbSBarry Smith /*
370d382aafbSBarry Smith     Defines some elementary mathematics functions and constants.
371d382aafbSBarry Smith */
372d382aafbSBarry Smith #include "petscmath.h"
373d382aafbSBarry Smith 
374d382aafbSBarry Smith /*
375d382aafbSBarry Smith     Declare extern C stuff after including external header files
376d382aafbSBarry Smith */
377d382aafbSBarry Smith 
378d382aafbSBarry Smith PETSC_EXTERN_CXX_BEGIN
379d382aafbSBarry Smith 
380d382aafbSBarry Smith /*
381d382aafbSBarry Smith        Basic PETSc constants
382d382aafbSBarry Smith */
383d382aafbSBarry Smith 
384d382aafbSBarry Smith /*E
385ace3abfcSBarry Smith     PetscBool  - Logical variable. Actually an int in C and a logical in Fortran.
386d382aafbSBarry Smith 
387d382aafbSBarry Smith    Level: beginner
388d382aafbSBarry Smith 
389ace3abfcSBarry Smith    Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
39034e82e7dSBarry Smith       boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
39134e82e7dSBarry Smith 
392d382aafbSBarry Smith E*/
393ace3abfcSBarry Smith typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
394ace3abfcSBarry Smith extern const char *PetscBools[];
39570b3c8c7SBarry Smith 
39670b3c8c7SBarry Smith /*E
39770b3c8c7SBarry Smith     PetscCopyMode  - Determines how an array passed to certain functions is copied or retained
39870b3c8c7SBarry Smith 
39970b3c8c7SBarry Smith    Level: beginner
40070b3c8c7SBarry Smith 
40170b3c8c7SBarry Smith $   PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
40270b3c8c7SBarry Smith $   PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
40370b3c8c7SBarry Smith $                       delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
40470b3c8c7SBarry Smith $   PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
40570b3c8c7SBarry Smith                         the array but the user must delete the array after the object is destroyed.
40670b3c8c7SBarry Smith 
40770b3c8c7SBarry Smith E*/
40870b3c8c7SBarry Smith typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
40970b3c8c7SBarry Smith extern const char *PetscCopyModes[];
410d382aafbSBarry Smith 
411d382aafbSBarry Smith /*MC
412ace3abfcSBarry Smith     PETSC_FALSE - False value of PetscBool
413d382aafbSBarry Smith 
414d382aafbSBarry Smith     Level: beginner
415d382aafbSBarry Smith 
416d382aafbSBarry Smith     Note: Zero integer
417d382aafbSBarry Smith 
418ace3abfcSBarry Smith .seealso: PetscBool , PETSC_TRUE
419d382aafbSBarry Smith M*/
420d382aafbSBarry Smith 
421d382aafbSBarry Smith /*MC
422ace3abfcSBarry Smith     PETSC_TRUE - True value of PetscBool
423d382aafbSBarry Smith 
424d382aafbSBarry Smith     Level: beginner
425d382aafbSBarry Smith 
426d382aafbSBarry Smith     Note: Nonzero integer
427d382aafbSBarry Smith 
428ace3abfcSBarry Smith .seealso: PetscBool , PETSC_FALSE
429d382aafbSBarry Smith M*/
430d382aafbSBarry Smith 
431d382aafbSBarry Smith /*MC
432d382aafbSBarry Smith     PETSC_NULL - standard way of passing in a null or array or pointer
433d382aafbSBarry Smith 
434d382aafbSBarry Smith    Level: beginner
435d382aafbSBarry Smith 
436d382aafbSBarry Smith    Notes: accepted by many PETSc functions to not set a parameter and instead use
437d382aafbSBarry Smith           some default
438d382aafbSBarry Smith 
439d382aafbSBarry Smith           This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
440503cfb0cSBarry Smith           PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc
441d382aafbSBarry Smith 
44234e82e7dSBarry Smith   Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under
44334e82e7dSBarry Smith       different versions of Unix. It is tricky to insure the correct include file is always included.
44434e82e7dSBarry Smith 
445d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
446d382aafbSBarry Smith 
447d382aafbSBarry Smith M*/
448d382aafbSBarry Smith #define PETSC_NULL           0
449d382aafbSBarry Smith 
450d382aafbSBarry Smith /*MC
451d382aafbSBarry Smith     PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument
452d382aafbSBarry Smith 
453d382aafbSBarry Smith    Level: beginner
454d382aafbSBarry Smith 
455d382aafbSBarry Smith    Note: accepted by many PETSc functions to not set a parameter and instead use
456d382aafbSBarry Smith           some default
457d382aafbSBarry Smith 
458d382aafbSBarry Smith    Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
459d382aafbSBarry Smith           PETSC_NULL_DOUBLE_PRECISION etc
460d382aafbSBarry Smith 
461d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE
462d382aafbSBarry Smith 
463d382aafbSBarry Smith M*/
464d382aafbSBarry Smith #define PETSC_IGNORE         PETSC_NULL
465d382aafbSBarry Smith 
466d382aafbSBarry Smith /*MC
467557d4da8SBarry Smith     PETSC_DECIDE - standard way of passing in integer or floating point parameter
468557d4da8SBarry Smith        where you wish PETSc to use the default.
469557d4da8SBarry Smith 
470557d4da8SBarry Smith    Level: beginner
471557d4da8SBarry Smith 
472557d4da8SBarry Smith .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
473557d4da8SBarry Smith 
474557d4da8SBarry Smith M*/
475557d4da8SBarry Smith #define PETSC_DECIDE  -1
476557d4da8SBarry Smith 
477557d4da8SBarry Smith /*MC
478d382aafbSBarry Smith     PETSC_DETERMINE - standard way of passing in integer or floating point parameter
479d382aafbSBarry Smith        where you wish PETSc to compute the required value.
480d382aafbSBarry Smith 
481d382aafbSBarry Smith    Level: beginner
482d382aafbSBarry Smith 
483557d4da8SBarry Smith 
484557d4da8SBarry Smith    Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
485557d4da8SBarry Smith      some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
486557d4da8SBarry Smith 
487d382aafbSBarry Smith .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes()
488d382aafbSBarry Smith 
489d382aafbSBarry Smith M*/
490d382aafbSBarry Smith #define PETSC_DETERMINE PETSC_DECIDE
491d382aafbSBarry Smith 
492d382aafbSBarry Smith /*MC
493557d4da8SBarry Smith     PETSC_DEFAULT - standard way of passing in integer or floating point parameter
494557d4da8SBarry Smith        where you wish PETSc to use the default.
495557d4da8SBarry Smith 
496557d4da8SBarry Smith    Level: beginner
497557d4da8SBarry Smith 
498557d4da8SBarry Smith    Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION.
499557d4da8SBarry Smith 
500557d4da8SBarry Smith .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE
501557d4da8SBarry Smith 
502557d4da8SBarry Smith M*/
503557d4da8SBarry Smith #define PETSC_DEFAULT  -2
504557d4da8SBarry Smith 
505557d4da8SBarry Smith /*MC
506d382aafbSBarry Smith     PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
507d382aafbSBarry Smith            all the processs that PETSc knows about.
508d382aafbSBarry Smith 
509d382aafbSBarry Smith    Level: beginner
510d382aafbSBarry Smith 
511d382aafbSBarry Smith    Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
512d382aafbSBarry Smith           run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
513d382aafbSBarry Smith           communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
514d382aafbSBarry Smith           PetscInitialize()
515d382aafbSBarry Smith 
516d382aafbSBarry Smith .seealso: PETSC_COMM_SELF
517d382aafbSBarry Smith 
518d382aafbSBarry Smith M*/
519d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_WORLD;
520d382aafbSBarry Smith 
521d382aafbSBarry Smith /*MC
522503cfb0cSBarry Smith     PETSC_COMM_SELF - This is always MPI_COMM_SELF
523d382aafbSBarry Smith 
524d382aafbSBarry Smith    Level: beginner
525d382aafbSBarry Smith 
526d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD
527d382aafbSBarry Smith 
528d382aafbSBarry Smith M*/
529d382aafbSBarry Smith #define PETSC_COMM_SELF MPI_COMM_SELF
530d382aafbSBarry Smith 
5317087cfbeSBarry Smith extern  PetscBool  PetscInitializeCalled;
5327087cfbeSBarry Smith extern  PetscBool  PetscFinalizeCalled;
533d382aafbSBarry Smith 
5347087cfbeSBarry Smith extern PetscErrorCode  PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
5357087cfbeSBarry Smith extern PetscErrorCode  PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
5367087cfbeSBarry Smith extern PetscErrorCode  PetscCommDestroy(MPI_Comm*);
537d382aafbSBarry Smith 
538d382aafbSBarry Smith /*MC
539d382aafbSBarry Smith    PetscMalloc - Allocates memory
540d382aafbSBarry Smith 
541eca87e8dSBarry Smith    Synopsis:
542eca87e8dSBarry Smith    PetscErrorCode PetscMalloc(size_t m,void **result)
543eca87e8dSBarry Smith 
544eca87e8dSBarry Smith    Not Collective
545eca87e8dSBarry Smith 
546d382aafbSBarry Smith    Input Parameter:
547d382aafbSBarry Smith .  m - number of bytes to allocate
548d382aafbSBarry Smith 
549d382aafbSBarry Smith    Output Parameter:
550d382aafbSBarry Smith .  result - memory allocated
551d382aafbSBarry Smith 
552d382aafbSBarry Smith    Level: beginner
553d382aafbSBarry Smith 
554d382aafbSBarry Smith    Notes: Memory is always allocated at least double aligned
555d382aafbSBarry Smith 
556d382aafbSBarry Smith           If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will
557d382aafbSBarry Smith           properly handle not freeing the null pointer.
558d382aafbSBarry Smith 
559d382aafbSBarry Smith .seealso: PetscFree(), PetscNew()
560d382aafbSBarry Smith 
561d382aafbSBarry Smith   Concepts: memory allocation
562d382aafbSBarry Smith 
563d382aafbSBarry Smith M*/
5642714b66aSJed Brown #define PetscMalloc(a,b)  ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) )
565d382aafbSBarry Smith 
566d382aafbSBarry Smith /*MC
567503cfb0cSBarry Smith    PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
568d382aafbSBarry Smith 
569d382aafbSBarry Smith    Synopsis:
570d382aafbSBarry Smith    void *PetscAddrAlign(void *addr)
571d382aafbSBarry Smith 
572eca87e8dSBarry Smith    Not Collective
573eca87e8dSBarry Smith 
574eca87e8dSBarry Smith    Input Parameters:
575eca87e8dSBarry Smith .  addr - address to align (any pointer type)
576eca87e8dSBarry Smith 
577d382aafbSBarry Smith    Level: developer
578d382aafbSBarry Smith 
579d382aafbSBarry Smith .seealso: PetscMallocAlign()
580d382aafbSBarry Smith 
581d382aafbSBarry Smith   Concepts: memory allocation
582d382aafbSBarry Smith M*/
583d382aafbSBarry Smith #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
584d382aafbSBarry Smith 
585d382aafbSBarry Smith /*MC
586503cfb0cSBarry Smith    PetscMalloc2 - Allocates 2 chunks of  memory both aligned to PETSC_MEMALIGN
587d382aafbSBarry Smith 
588eca87e8dSBarry Smith    Synopsis:
589eca87e8dSBarry Smith    PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2)
590eca87e8dSBarry Smith 
591eca87e8dSBarry Smith    Not Collective
592eca87e8dSBarry Smith 
593d382aafbSBarry Smith    Input Parameter:
594d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
595d382aafbSBarry Smith .  t1 - type of first memory elements
596d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
597d382aafbSBarry Smith -  t2 - type of second memory elements
598d382aafbSBarry Smith 
599d382aafbSBarry Smith    Output Parameter:
600d382aafbSBarry Smith +  r1 - memory allocated in first chunk
601d382aafbSBarry Smith -  r2 - memory allocated in second chunk
602d382aafbSBarry Smith 
603d382aafbSBarry Smith    Level: developer
604d382aafbSBarry Smith 
605d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
606d382aafbSBarry Smith 
607d382aafbSBarry Smith   Concepts: memory allocation
608d382aafbSBarry Smith 
609d382aafbSBarry Smith M*/
610d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
611d382aafbSBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2))
612d382aafbSBarry Smith #else
6133b98c0a2SBarry Smith #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) \
614d382aafbSBarry Smith                                          || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0))
615d382aafbSBarry Smith #endif
616d382aafbSBarry Smith 
617d382aafbSBarry Smith /*MC
618503cfb0cSBarry Smith    PetscMalloc3 - Allocates 3 chunks of  memory  all aligned to PETSC_MEMALIGN
619d382aafbSBarry Smith 
620eca87e8dSBarry Smith    Synopsis:
621eca87e8dSBarry Smith    PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3)
622eca87e8dSBarry Smith 
623eca87e8dSBarry Smith    Not Collective
624eca87e8dSBarry Smith 
625d382aafbSBarry Smith    Input Parameter:
626d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
627d382aafbSBarry Smith .  t1 - type of first memory elements
628d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
629d382aafbSBarry Smith .  t2 - type of second memory elements
630d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
631d382aafbSBarry Smith -  t3 - type of third memory elements
632d382aafbSBarry Smith 
633d382aafbSBarry Smith    Output Parameter:
634d382aafbSBarry Smith +  r1 - memory allocated in first chunk
635d382aafbSBarry Smith .  r2 - memory allocated in second chunk
636d382aafbSBarry Smith -  r3 - memory allocated in third chunk
637d382aafbSBarry Smith 
638d382aafbSBarry Smith    Level: developer
639d382aafbSBarry Smith 
640d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3()
641d382aafbSBarry Smith 
642d382aafbSBarry Smith   Concepts: memory allocation
643d382aafbSBarry Smith 
644d382aafbSBarry Smith M*/
645d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
646d382aafbSBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3))
647d382aafbSBarry Smith #else
6483b98c0a2SBarry Smith #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \
649d382aafbSBarry Smith                                                   || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0))
650d382aafbSBarry Smith #endif
651d382aafbSBarry Smith 
652d382aafbSBarry Smith /*MC
653503cfb0cSBarry Smith    PetscMalloc4 - Allocates 4 chunks of  memory  all aligned to PETSC_MEMALIGN
654d382aafbSBarry Smith 
655eca87e8dSBarry Smith    Synopsis:
656eca87e8dSBarry Smith    PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4)
657eca87e8dSBarry Smith 
658eca87e8dSBarry Smith    Not Collective
659eca87e8dSBarry Smith 
660d382aafbSBarry Smith    Input Parameter:
661d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
662d382aafbSBarry Smith .  t1 - type of first memory elements
663d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
664d382aafbSBarry Smith .  t2 - type of second memory elements
665d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
666d382aafbSBarry Smith .  t3 - type of third memory elements
667d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
668d382aafbSBarry Smith -  t4 - type of fourth memory elements
669d382aafbSBarry Smith 
670d382aafbSBarry Smith    Output Parameter:
671d382aafbSBarry Smith +  r1 - memory allocated in first chunk
672d382aafbSBarry Smith .  r2 - memory allocated in second chunk
673d382aafbSBarry Smith .  r3 - memory allocated in third chunk
674d382aafbSBarry Smith -  r4 - memory allocated in fourth chunk
675d382aafbSBarry Smith 
676d382aafbSBarry Smith    Level: developer
677d382aafbSBarry Smith 
678d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4()
679d382aafbSBarry Smith 
680d382aafbSBarry Smith   Concepts: memory allocation
681d382aafbSBarry Smith 
682d382aafbSBarry Smith M*/
683d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
684d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4))
685d382aafbSBarry Smith #else
686d382aafbSBarry Smith #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4)               \
6873b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \
688d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0))
689d382aafbSBarry Smith #endif
690d382aafbSBarry Smith 
691d382aafbSBarry Smith /*MC
692503cfb0cSBarry Smith    PetscMalloc5 - Allocates 5 chunks of  memory all aligned to PETSC_MEMALIGN
693d382aafbSBarry Smith 
694eca87e8dSBarry Smith    Synopsis:
695eca87e8dSBarry Smith    PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5)
696eca87e8dSBarry Smith 
697eca87e8dSBarry Smith    Not Collective
698eca87e8dSBarry Smith 
699d382aafbSBarry Smith    Input Parameter:
700d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
701d382aafbSBarry Smith .  t1 - type of first memory elements
702d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
703d382aafbSBarry Smith .  t2 - type of second memory elements
704d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
705d382aafbSBarry Smith .  t3 - type of third memory elements
706d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
707d382aafbSBarry Smith .  t4 - type of fourth memory elements
708d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
709d382aafbSBarry Smith -  t5 - type of fifth memory elements
710d382aafbSBarry Smith 
711d382aafbSBarry Smith    Output Parameter:
712d382aafbSBarry Smith +  r1 - memory allocated in first chunk
713d382aafbSBarry Smith .  r2 - memory allocated in second chunk
714d382aafbSBarry Smith .  r3 - memory allocated in third chunk
715d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
716d382aafbSBarry Smith -  r5 - memory allocated in fifth chunk
717d382aafbSBarry Smith 
718d382aafbSBarry Smith    Level: developer
719d382aafbSBarry Smith 
720d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5()
721d382aafbSBarry Smith 
722d382aafbSBarry Smith   Concepts: memory allocation
723d382aafbSBarry Smith 
724d382aafbSBarry Smith M*/
725d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
726d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5))
727d382aafbSBarry Smith #else
728d382aafbSBarry Smith #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5)      \
7293b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \
730d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0))
731d382aafbSBarry Smith #endif
732d382aafbSBarry Smith 
733d382aafbSBarry Smith 
734d382aafbSBarry Smith /*MC
735503cfb0cSBarry Smith    PetscMalloc6 - Allocates 6 chunks of  memory all aligned to PETSC_MEMALIGN
736d382aafbSBarry Smith 
737eca87e8dSBarry Smith    Synopsis:
738eca87e8dSBarry Smith    PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6)
739eca87e8dSBarry Smith 
740eca87e8dSBarry Smith    Not Collective
741eca87e8dSBarry Smith 
742d382aafbSBarry Smith    Input Parameter:
743d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
744d382aafbSBarry Smith .  t1 - type of first memory elements
745d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
746d382aafbSBarry Smith .  t2 - type of second memory elements
747d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
748d382aafbSBarry Smith .  t3 - type of third memory elements
749d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
750d382aafbSBarry Smith .  t4 - type of fourth memory elements
751d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
752d382aafbSBarry Smith .  t5 - type of fifth memory elements
753d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
754d382aafbSBarry Smith -  t6 - type of sixth memory elements
755d382aafbSBarry Smith 
756d382aafbSBarry Smith    Output Parameter:
757d382aafbSBarry Smith +  r1 - memory allocated in first chunk
758d382aafbSBarry Smith .  r2 - memory allocated in second chunk
759d382aafbSBarry Smith .  r3 - memory allocated in third chunk
760d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
761d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
762d382aafbSBarry Smith -  r6 - memory allocated in sixth chunk
763d382aafbSBarry Smith 
764d382aafbSBarry Smith    Level: developer
765d382aafbSBarry Smith 
766d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
767d382aafbSBarry Smith 
768d382aafbSBarry Smith   Concepts: memory allocation
769d382aafbSBarry Smith 
770d382aafbSBarry Smith M*/
771d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
772d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6))
773d382aafbSBarry Smith #else
774d382aafbSBarry Smith #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \
7753b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \
776d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0))
777d382aafbSBarry Smith #endif
778d382aafbSBarry Smith 
779d382aafbSBarry Smith /*MC
780503cfb0cSBarry Smith    PetscMalloc7 - Allocates 7 chunks of  memory all aligned to PETSC_MEMALIGN
781d382aafbSBarry Smith 
782eca87e8dSBarry Smith    Synopsis:
783eca87e8dSBarry Smith    PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7)
784eca87e8dSBarry Smith 
785eca87e8dSBarry Smith    Not Collective
786eca87e8dSBarry Smith 
787d382aafbSBarry Smith    Input Parameter:
788d382aafbSBarry Smith +  m1 - number of elements to allocate in 1st chunk  (may be zero)
789d382aafbSBarry Smith .  t1 - type of first memory elements
790d382aafbSBarry Smith .  m2 - number of elements to allocate in 2nd chunk  (may be zero)
791d382aafbSBarry Smith .  t2 - type of second memory elements
792d382aafbSBarry Smith .  m3 - number of elements to allocate in 3rd chunk  (may be zero)
793d382aafbSBarry Smith .  t3 - type of third memory elements
794d382aafbSBarry Smith .  m4 - number of elements to allocate in 4th chunk  (may be zero)
795d382aafbSBarry Smith .  t4 - type of fourth memory elements
796d382aafbSBarry Smith .  m5 - number of elements to allocate in 5th chunk  (may be zero)
797d382aafbSBarry Smith .  t5 - type of fifth memory elements
798d382aafbSBarry Smith .  m6 - number of elements to allocate in 6th chunk  (may be zero)
799d382aafbSBarry Smith .  t6 - type of sixth memory elements
800d382aafbSBarry Smith .  m7 - number of elements to allocate in 7th chunk  (may be zero)
801d382aafbSBarry Smith -  t7 - type of sixth memory elements
802d382aafbSBarry Smith 
803d382aafbSBarry Smith    Output Parameter:
804d382aafbSBarry Smith +  r1 - memory allocated in first chunk
805d382aafbSBarry Smith .  r2 - memory allocated in second chunk
806d382aafbSBarry Smith .  r3 - memory allocated in third chunk
807d382aafbSBarry Smith .  r4 - memory allocated in fourth chunk
808d382aafbSBarry Smith .  r5 - memory allocated in fifth chunk
809d382aafbSBarry Smith .  r6 - memory allocated in sixth chunk
810eca87e8dSBarry Smith -  r7 - memory allocated in seventh chunk
811d382aafbSBarry Smith 
812d382aafbSBarry Smith    Level: developer
813d382aafbSBarry Smith 
814d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7()
815d382aafbSBarry Smith 
816d382aafbSBarry Smith   Concepts: memory allocation
817d382aafbSBarry Smith 
818d382aafbSBarry Smith M*/
819d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
820d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7))
821d382aafbSBarry Smith #else
822d382aafbSBarry Smith #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \
8233b98c0a2SBarry Smith   ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \
824d382aafbSBarry Smith    || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0))
825d382aafbSBarry Smith #endif
826d382aafbSBarry Smith 
827d382aafbSBarry Smith /*MC
828503cfb0cSBarry Smith    PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
829d382aafbSBarry Smith 
830eca87e8dSBarry Smith    Synopsis:
831eca87e8dSBarry Smith    PetscErrorCode PetscNew(struct type,((type *))result)
832eca87e8dSBarry Smith 
833eca87e8dSBarry Smith    Not Collective
834eca87e8dSBarry Smith 
835d382aafbSBarry Smith    Input Parameter:
836d382aafbSBarry Smith .  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
837d382aafbSBarry Smith 
838d382aafbSBarry Smith    Output Parameter:
839d382aafbSBarry Smith .  result - memory allocated
840d382aafbSBarry Smith 
841d382aafbSBarry Smith    Level: beginner
842d382aafbSBarry Smith 
843ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNewLog()
844d382aafbSBarry Smith 
845d382aafbSBarry Smith   Concepts: memory allocation
846d382aafbSBarry Smith 
847d382aafbSBarry Smith M*/
848d382aafbSBarry Smith #define PetscNew(A,b)      (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A)))
849ad0619ddSBarry Smith 
850ad0619ddSBarry Smith /*MC
851ad0619ddSBarry Smith    PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
852ad0619ddSBarry Smith          with the given object using PetscLogObjectMemory().
853ad0619ddSBarry Smith 
854ad0619ddSBarry Smith    Synopsis:
855ad0619ddSBarry Smith    PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result)
856ad0619ddSBarry Smith 
857ad0619ddSBarry Smith    Not Collective
858ad0619ddSBarry Smith 
859ad0619ddSBarry Smith    Input Parameter:
860ad0619ddSBarry Smith +  obj - object memory is logged to
861ad0619ddSBarry Smith -  type - structure name of space to be allocated. Memory of size sizeof(type) is allocated
862ad0619ddSBarry Smith 
863ad0619ddSBarry Smith    Output Parameter:
864ad0619ddSBarry Smith .  result - memory allocated
865ad0619ddSBarry Smith 
866ad0619ddSBarry Smith    Level: developer
867ad0619ddSBarry Smith 
868ad0619ddSBarry Smith .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory()
869ad0619ddSBarry Smith 
870ad0619ddSBarry Smith   Concepts: memory allocation
871ad0619ddSBarry Smith 
872ad0619ddSBarry Smith M*/
873d382aafbSBarry Smith #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0))
874d382aafbSBarry Smith 
875d382aafbSBarry Smith /*MC
876d382aafbSBarry Smith    PetscFree - Frees memory
877d382aafbSBarry Smith 
878eca87e8dSBarry Smith    Synopsis:
879eca87e8dSBarry Smith    PetscErrorCode PetscFree(void *memory)
880eca87e8dSBarry Smith 
881eca87e8dSBarry Smith    Not Collective
882eca87e8dSBarry Smith 
883d382aafbSBarry Smith    Input Parameter:
884d382aafbSBarry Smith .   memory - memory to free (the pointer is ALWAYS set to 0 upon sucess)
885d382aafbSBarry Smith 
886d382aafbSBarry Smith    Level: beginner
887d382aafbSBarry Smith 
888d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscNew() or PetscMalloc()
889d382aafbSBarry Smith 
890d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid()
891d382aafbSBarry Smith 
892d382aafbSBarry Smith   Concepts: memory allocation
893d382aafbSBarry Smith 
894d382aafbSBarry Smith M*/
89512537b14SJed Brown #define PetscFree(a)   ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0)))
896d382aafbSBarry Smith 
897d382aafbSBarry Smith /*MC
898d382aafbSBarry Smith    PetscFreeVoid - Frees memory
899d382aafbSBarry Smith 
900d382aafbSBarry Smith    Synopsis:
901d382aafbSBarry Smith    void PetscFreeVoid(void *memory)
902d382aafbSBarry Smith 
903eca87e8dSBarry Smith    Not Collective
904eca87e8dSBarry Smith 
905eca87e8dSBarry Smith    Input Parameter:
906eca87e8dSBarry Smith .   memory - memory to free
907eca87e8dSBarry Smith 
908d382aafbSBarry Smith    Level: beginner
909d382aafbSBarry Smith 
910d382aafbSBarry Smith    Notes: This is different from PetscFree() in that no error code is returned
911d382aafbSBarry Smith 
912d382aafbSBarry Smith .seealso: PetscFree(), PetscNew(), PetscMalloc()
913d382aafbSBarry Smith 
914d382aafbSBarry Smith   Concepts: memory allocation
915d382aafbSBarry Smith 
916d382aafbSBarry Smith M*/
9172714b66aSJed Brown #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0)
918d382aafbSBarry Smith 
919d382aafbSBarry Smith 
920d382aafbSBarry Smith /*MC
921d382aafbSBarry Smith    PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
922d382aafbSBarry Smith 
923eca87e8dSBarry Smith    Synopsis:
924eca87e8dSBarry Smith    PetscErrorCode PetscFree2(void *memory1,void *memory2)
925eca87e8dSBarry Smith 
926eca87e8dSBarry Smith    Not Collective
927eca87e8dSBarry Smith 
928d382aafbSBarry Smith    Input Parameter:
929d382aafbSBarry Smith +   memory1 - memory to free
930d382aafbSBarry Smith -   memory2 - 2nd memory to free
931d382aafbSBarry Smith 
932d382aafbSBarry Smith    Level: developer
933d382aafbSBarry Smith 
934d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc2()
935d382aafbSBarry Smith 
936d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
937d382aafbSBarry Smith 
938d382aafbSBarry Smith   Concepts: memory allocation
939d382aafbSBarry Smith 
940d382aafbSBarry Smith M*/
941d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
942d382aafbSBarry Smith #define PetscFree2(m1,m2)   (PetscFree(m2) || PetscFree(m1))
943d382aafbSBarry Smith #else
94481dabb53SJed Brown #define PetscFree2(m1,m2)   ((m2)=0, PetscFree(m1))
945d382aafbSBarry Smith #endif
946d382aafbSBarry Smith 
947d382aafbSBarry Smith /*MC
948d382aafbSBarry Smith    PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
949d382aafbSBarry Smith 
950eca87e8dSBarry Smith    Synopsis:
951eca87e8dSBarry Smith    PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
952eca87e8dSBarry Smith 
953eca87e8dSBarry Smith    Not Collective
954eca87e8dSBarry Smith 
955d382aafbSBarry Smith    Input Parameter:
956d382aafbSBarry Smith +   memory1 - memory to free
957d382aafbSBarry Smith .   memory2 - 2nd memory to free
958d382aafbSBarry Smith -   memory3 - 3rd memory to free
959d382aafbSBarry Smith 
960d382aafbSBarry Smith    Level: developer
961d382aafbSBarry Smith 
962d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc3()
963d382aafbSBarry Smith 
964d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
965d382aafbSBarry Smith 
966d382aafbSBarry Smith   Concepts: memory allocation
967d382aafbSBarry Smith 
968d382aafbSBarry Smith M*/
969d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
970d382aafbSBarry Smith #define PetscFree3(m1,m2,m3)   (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
971d382aafbSBarry Smith #else
97281dabb53SJed Brown #define PetscFree3(m1,m2,m3)   ((m3)=0,(m2)=0,PetscFree(m1))
973d382aafbSBarry Smith #endif
974d382aafbSBarry Smith 
975d382aafbSBarry Smith /*MC
976d382aafbSBarry Smith    PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
977d382aafbSBarry Smith 
978eca87e8dSBarry Smith    Synopsis:
979eca87e8dSBarry Smith    PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
980eca87e8dSBarry Smith 
981eca87e8dSBarry Smith    Not Collective
982eca87e8dSBarry Smith 
983d382aafbSBarry Smith    Input Parameter:
984d382aafbSBarry Smith +   m1 - memory to free
985d382aafbSBarry Smith .   m2 - 2nd memory to free
986d382aafbSBarry Smith .   m3 - 3rd memory to free
987d382aafbSBarry Smith -   m4 - 4th memory to free
988d382aafbSBarry Smith 
989d382aafbSBarry Smith    Level: developer
990d382aafbSBarry Smith 
991d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc4()
992d382aafbSBarry Smith 
993d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
994d382aafbSBarry Smith 
995d382aafbSBarry Smith   Concepts: memory allocation
996d382aafbSBarry Smith 
997d382aafbSBarry Smith M*/
998d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
999d382aafbSBarry Smith #define PetscFree4(m1,m2,m3,m4)   (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1000d382aafbSBarry Smith #else
100181dabb53SJed Brown #define PetscFree4(m1,m2,m3,m4)   ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1002d382aafbSBarry Smith #endif
1003d382aafbSBarry Smith 
1004d382aafbSBarry Smith /*MC
1005d382aafbSBarry Smith    PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
1006d382aafbSBarry Smith 
1007eca87e8dSBarry Smith    Synopsis:
1008eca87e8dSBarry Smith    PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
1009eca87e8dSBarry Smith 
1010eca87e8dSBarry Smith    Not Collective
1011eca87e8dSBarry Smith 
1012d382aafbSBarry Smith    Input Parameter:
1013d382aafbSBarry Smith +   m1 - memory to free
1014d382aafbSBarry Smith .   m2 - 2nd memory to free
1015d382aafbSBarry Smith .   m3 - 3rd memory to free
1016d382aafbSBarry Smith .   m4 - 4th memory to free
1017d382aafbSBarry Smith -   m5 - 5th memory to free
1018d382aafbSBarry Smith 
1019d382aafbSBarry Smith    Level: developer
1020d382aafbSBarry Smith 
1021d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc5()
1022d382aafbSBarry Smith 
1023d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
1024d382aafbSBarry Smith 
1025d382aafbSBarry Smith   Concepts: memory allocation
1026d382aafbSBarry Smith 
1027d382aafbSBarry Smith M*/
1028d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1029d382aafbSBarry Smith #define PetscFree5(m1,m2,m3,m4,m5)   (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1030d382aafbSBarry Smith #else
103181dabb53SJed Brown #define PetscFree5(m1,m2,m3,m4,m5)   ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1032d382aafbSBarry Smith #endif
1033d382aafbSBarry Smith 
1034d382aafbSBarry Smith 
1035d382aafbSBarry Smith /*MC
1036d382aafbSBarry Smith    PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
1037d382aafbSBarry Smith 
1038eca87e8dSBarry Smith    Synopsis:
1039eca87e8dSBarry Smith    PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
1040eca87e8dSBarry Smith 
1041eca87e8dSBarry Smith    Not Collective
1042eca87e8dSBarry Smith 
1043d382aafbSBarry Smith    Input Parameter:
1044d382aafbSBarry Smith +   m1 - memory to free
1045d382aafbSBarry Smith .   m2 - 2nd memory to free
1046d382aafbSBarry Smith .   m3 - 3rd memory to free
1047d382aafbSBarry Smith .   m4 - 4th memory to free
1048d382aafbSBarry Smith .   m5 - 5th memory to free
1049d382aafbSBarry Smith -   m6 - 6th memory to free
1050d382aafbSBarry Smith 
1051d382aafbSBarry Smith 
1052d382aafbSBarry Smith    Level: developer
1053d382aafbSBarry Smith 
1054d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc6()
1055d382aafbSBarry Smith 
1056d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
1057d382aafbSBarry Smith 
1058d382aafbSBarry Smith   Concepts: memory allocation
1059d382aafbSBarry Smith 
1060d382aafbSBarry Smith M*/
1061d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1062d382aafbSBarry Smith #define PetscFree6(m1,m2,m3,m4,m5,m6)   (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1063d382aafbSBarry Smith #else
106481dabb53SJed Brown #define PetscFree6(m1,m2,m3,m4,m5,m6)   ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1065d382aafbSBarry Smith #endif
1066d382aafbSBarry Smith 
1067d382aafbSBarry Smith /*MC
1068d382aafbSBarry Smith    PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
1069d382aafbSBarry Smith 
1070eca87e8dSBarry Smith    Synopsis:
1071eca87e8dSBarry Smith    PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1072eca87e8dSBarry Smith 
1073eca87e8dSBarry Smith    Not Collective
1074eca87e8dSBarry Smith 
1075d382aafbSBarry Smith    Input Parameter:
1076d382aafbSBarry Smith +   m1 - memory to free
1077d382aafbSBarry Smith .   m2 - 2nd memory to free
1078d382aafbSBarry Smith .   m3 - 3rd memory to free
1079d382aafbSBarry Smith .   m4 - 4th memory to free
1080d382aafbSBarry Smith .   m5 - 5th memory to free
1081d382aafbSBarry Smith .   m6 - 6th memory to free
1082d382aafbSBarry Smith -   m7 - 7th memory to free
1083d382aafbSBarry Smith 
1084d382aafbSBarry Smith 
1085d382aafbSBarry Smith    Level: developer
1086d382aafbSBarry Smith 
1087d382aafbSBarry Smith    Notes: Memory must have been obtained with PetscMalloc7()
1088d382aafbSBarry Smith 
1089d382aafbSBarry Smith .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1090d382aafbSBarry Smith           PetscMalloc7()
1091d382aafbSBarry Smith 
1092d382aafbSBarry Smith   Concepts: memory allocation
1093d382aafbSBarry Smith 
1094d382aafbSBarry Smith M*/
1095d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1096d382aafbSBarry Smith #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1097d382aafbSBarry Smith #else
109881dabb53SJed Brown #define PetscFree7(m1,m2,m3,m4,m5,m6,m7)   ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1))
1099d382aafbSBarry Smith #endif
1100d382aafbSBarry Smith 
11017087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);
11027087cfbeSBarry Smith extern  PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);
11037087cfbeSBarry Smith extern PetscErrorCode   PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[]));
11047087cfbeSBarry Smith extern PetscErrorCode   PetscMallocClear(void);
1105d382aafbSBarry Smith 
1106d382aafbSBarry Smith /*
110766d669d6SBarry Smith    Routines for tracing memory corruption/bleeding with default PETSc  memory allocation
1108d382aafbSBarry Smith */
11097087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDump(FILE *);
11107087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDumpLog(FILE *);
11117087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetCurrentUsage(PetscLogDouble *);
11127087cfbeSBarry Smith extern PetscErrorCode    PetscMallocGetMaximumUsage(PetscLogDouble *);
11137087cfbeSBarry Smith extern PetscErrorCode    PetscMallocDebug(PetscBool);
11147087cfbeSBarry Smith extern PetscErrorCode    PetscMallocValidate(int,const char[],const char[],const char[]);
11157087cfbeSBarry Smith extern PetscErrorCode    PetscMallocSetDumpLog(void);
1116d382aafbSBarry Smith 
1117d382aafbSBarry Smith 
1118d382aafbSBarry Smith /*E
1119d382aafbSBarry Smith     PetscDataType - Used for handling different basic data types.
1120d382aafbSBarry Smith 
1121d382aafbSBarry Smith    Level: beginner
1122d382aafbSBarry Smith 
1123d382aafbSBarry Smith    Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not?
1124d382aafbSBarry Smith 
1125d382aafbSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1126d382aafbSBarry Smith           PetscDataTypeGetSize()
1127d382aafbSBarry Smith 
1128d382aafbSBarry Smith E*/
1129d382aafbSBarry Smith typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
1130557d4da8SBarry Smith               PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC_LONG_DOUBLE = 10} PetscDataType;
1131d382aafbSBarry Smith extern const char *PetscDataTypes[];
1132d382aafbSBarry Smith 
1133d382aafbSBarry Smith #if defined(PETSC_USE_COMPLEX)
1134d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_COMPLEX
1135d382aafbSBarry Smith #else
1136ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1137d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_FLOAT
1138ce63c4c1SBarry Smith #elif defined(PETSC_USE_REAL_LONG_DOUBLE)
1139d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_LONG_DOUBLE
1140d382aafbSBarry Smith #else
1141d382aafbSBarry Smith #define  PETSC_SCALAR  PETSC_DOUBLE
1142d382aafbSBarry Smith #endif
1143d382aafbSBarry Smith #endif
1144ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL_SINGLE)
1145d382aafbSBarry Smith #define  PETSC_REAL  PETSC_FLOAT
1146ce63c4c1SBarry Smith #elif defined(PETSC_USE_REAL_LONG_DOUBLE)
1147d382aafbSBarry Smith #define  PETSC_REAL  PETSC_LONG_DOUBLE
1148d382aafbSBarry Smith #else
1149d382aafbSBarry Smith #define  PETSC_REAL  PETSC_DOUBLE
1150d382aafbSBarry Smith #endif
1151d382aafbSBarry Smith #define  PETSC_FORTRANADDR  PETSC_LONG
1152d382aafbSBarry Smith 
11537087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
11547087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
11557087cfbeSBarry Smith extern PetscErrorCode  PetscDataTypeGetSize(PetscDataType,size_t*);
1156d382aafbSBarry Smith 
1157d382aafbSBarry Smith /*
1158d382aafbSBarry Smith     Basic memory and string operations. These are usually simple wrappers
1159d382aafbSBarry Smith    around the basic Unix system calls, but a few of them have additional
1160d382aafbSBarry Smith    functionality and/or error checking.
1161d382aafbSBarry Smith */
11627087cfbeSBarry Smith extern PetscErrorCode    PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
11637087cfbeSBarry Smith extern PetscErrorCode    PetscMemmove(void*,void *,size_t);
11647087cfbeSBarry Smith extern PetscErrorCode    PetscMemcmp(const void*,const void*,size_t,PetscBool  *);
11657087cfbeSBarry Smith extern PetscErrorCode    PetscStrlen(const char[],size_t*);
11667087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArray(const char[],int*,char ***);
11677087cfbeSBarry Smith extern PetscErrorCode    PetscStrToArrayDestroy(int,char **);
11687087cfbeSBarry Smith extern PetscErrorCode    PetscStrcmp(const char[],const char[],PetscBool  *);
11697087cfbeSBarry Smith extern PetscErrorCode    PetscStrgrt(const char[],const char[],PetscBool  *);
11707087cfbeSBarry Smith extern PetscErrorCode    PetscStrcasecmp(const char[],const char[],PetscBool *);
11717087cfbeSBarry Smith extern PetscErrorCode    PetscStrncmp(const char[],const char[],size_t,PetscBool *);
11727087cfbeSBarry Smith extern PetscErrorCode    PetscStrcpy(char[],const char[]);
11737087cfbeSBarry Smith extern PetscErrorCode    PetscStrcat(char[],const char[]);
11747087cfbeSBarry Smith extern PetscErrorCode    PetscStrncat(char[],const char[],size_t);
11757087cfbeSBarry Smith extern PetscErrorCode    PetscStrncpy(char[],const char[],size_t);
11767087cfbeSBarry Smith extern PetscErrorCode    PetscStrchr(const char[],char,char *[]);
11777087cfbeSBarry Smith extern PetscErrorCode    PetscStrtolower(char[]);
11787087cfbeSBarry Smith extern PetscErrorCode    PetscStrrchr(const char[],char,char *[]);
11797087cfbeSBarry Smith extern PetscErrorCode    PetscStrstr(const char[],const char[],char *[]);
11807087cfbeSBarry Smith extern PetscErrorCode    PetscStrrstr(const char[],const char[],char *[]);
11817087cfbeSBarry Smith extern PetscErrorCode    PetscStrallocpy(const char[],char *[]);
11827087cfbeSBarry Smith extern PetscErrorCode    PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1183d382aafbSBarry Smith 
1184d382aafbSBarry Smith /*S
1185d382aafbSBarry Smith     PetscToken - 'Token' used for managing tokenizing strings
1186d382aafbSBarry Smith 
1187d382aafbSBarry Smith   Level: intermediate
1188d382aafbSBarry Smith 
1189d382aafbSBarry Smith .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1190d382aafbSBarry Smith S*/
1191d382aafbSBarry Smith typedef struct _p_PetscToken* PetscToken;
1192d382aafbSBarry Smith 
11937087cfbeSBarry Smith extern PetscErrorCode    PetscTokenCreate(const char[],const char,PetscToken*);
11947087cfbeSBarry Smith extern PetscErrorCode    PetscTokenFind(PetscToken,char *[]);
11957087cfbeSBarry Smith extern PetscErrorCode    PetscTokenDestroy(PetscToken);
1196d382aafbSBarry Smith 
1197d382aafbSBarry Smith /*
1198d382aafbSBarry Smith    These are  MPI operations for MPI_Allreduce() etc
1199d382aafbSBarry Smith */
12007087cfbeSBarry Smith extern  MPI_Op PetscMaxSum_Op;
1201ce63c4c1SBarry Smith #if (defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128)
12027087cfbeSBarry Smith extern  MPI_Op MPIU_SUM;
1203d382aafbSBarry Smith #else
1204d382aafbSBarry Smith #define MPIU_SUM MPI_SUM
1205d382aafbSBarry Smith #endif
1206ce63c4c1SBarry Smith #if defined(PETSC_USE_REAL___FLOAT128)
1207d9822059SBarry Smith extern  MPI_Op MPIU_MAX;
1208d9822059SBarry Smith extern  MPI_Op MPIU_MIN;
1209d9822059SBarry Smith #else
1210d9822059SBarry Smith #define MPIU_MAX MPI_MAX
1211d9822059SBarry Smith #define MPIU_MIN MPI_MIN
1212d9822059SBarry Smith #endif
12137087cfbeSBarry Smith extern PetscErrorCode  PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1214d382aafbSBarry Smith 
1215eb3f98d2SBarry Smith extern PetscErrorCode MPILong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1216eb3f98d2SBarry Smith extern PetscErrorCode MPILong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1217eb3f98d2SBarry Smith 
1218d382aafbSBarry Smith /*S
1219d382aafbSBarry Smith      PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1220d382aafbSBarry Smith 
1221d382aafbSBarry Smith    Level: beginner
1222d382aafbSBarry Smith 
1223d382aafbSBarry Smith    Note: This is the base class from which all objects appear.
1224d382aafbSBarry Smith 
12251890ba74SBarry Smith .seealso:  PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc()
1226d382aafbSBarry Smith S*/
1227d382aafbSBarry Smith typedef struct _p_PetscObject* PetscObject;
1228d382aafbSBarry Smith 
1229d382aafbSBarry Smith /*S
1230d382aafbSBarry Smith      PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed
1231d382aafbSBarry Smith       by string name
1232d382aafbSBarry Smith 
1233d382aafbSBarry Smith    Level: advanced
1234d382aafbSBarry Smith 
1235d382aafbSBarry Smith .seealso:  PetscFListAdd(), PetscFListDestroy()
1236d382aafbSBarry Smith S*/
1237d382aafbSBarry Smith typedef struct _n_PetscFList *PetscFList;
1238d382aafbSBarry Smith 
1239d382aafbSBarry Smith /*E
1240d382aafbSBarry Smith   PetscFileMode - Access mode for a file.
1241d382aafbSBarry Smith 
1242d382aafbSBarry Smith   Level: beginner
1243d382aafbSBarry Smith 
1244d382aafbSBarry Smith   FILE_MODE_READ - open a file at its beginning for reading
1245d382aafbSBarry Smith 
1246d382aafbSBarry Smith   FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1247d382aafbSBarry Smith 
1248d382aafbSBarry Smith   FILE_MODE_APPEND - open a file at end for writing
1249d382aafbSBarry Smith 
1250d382aafbSBarry Smith   FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1251d382aafbSBarry Smith 
1252d382aafbSBarry Smith   FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1253d382aafbSBarry Smith 
1254d382aafbSBarry Smith .seealso: PetscViewerFileSetMode()
1255d382aafbSBarry Smith E*/
1256d382aafbSBarry Smith typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1257d382aafbSBarry Smith 
1258d382aafbSBarry Smith #include "petscviewer.h"
1259d382aafbSBarry Smith #include "petscoptions.h"
1260d382aafbSBarry Smith 
12610700a824SBarry Smith #define PETSC_SMALLEST_CLASSID  1211211
12627087cfbeSBarry Smith extern PetscClassId   PETSC_LARGEST_CLASSID;
12637087cfbeSBarry Smith extern PetscClassId   PETSC_OBJECT_CLASSID;
12647087cfbeSBarry Smith extern PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1265d382aafbSBarry Smith 
1266d382aafbSBarry Smith /*
1267d382aafbSBarry Smith    Routines that get memory usage information from the OS
1268d382aafbSBarry Smith */
12697087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetCurrentUsage(PetscLogDouble *);
12707087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryGetMaximumUsage(PetscLogDouble *);
12717087cfbeSBarry Smith extern PetscErrorCode  PetscMemorySetGetMaximumUsage(void);
12727087cfbeSBarry Smith extern PetscErrorCode  PetscMemoryShowUsage(PetscViewer,const char[]);
1273d382aafbSBarry Smith 
12747087cfbeSBarry Smith extern PetscErrorCode  PetscInfoAllow(PetscBool ,const char []);
12757087cfbeSBarry Smith extern PetscErrorCode  PetscGetTime(PetscLogDouble*);
12767087cfbeSBarry Smith extern PetscErrorCode  PetscGetCPUTime(PetscLogDouble*);
12777087cfbeSBarry Smith extern PetscErrorCode  PetscSleep(PetscReal);
1278d382aafbSBarry Smith 
1279d382aafbSBarry Smith /*
1280d382aafbSBarry Smith    Initialization of PETSc
1281d382aafbSBarry Smith */
12827087cfbeSBarry Smith extern PetscErrorCode  PetscInitialize(int*,char***,const char[],const char[]);
1283d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscInitialize,(int *argc,char ***args),(argc,args,PETSC_NULL,PETSC_NULL))
12847087cfbeSBarry Smith extern PetscErrorCode  PetscInitializeNoArguments(void);
12857087cfbeSBarry Smith extern PetscErrorCode  PetscInitialized(PetscBool  *);
12867087cfbeSBarry Smith extern PetscErrorCode  PetscFinalized(PetscBool  *);
12877087cfbeSBarry Smith extern PetscErrorCode  PetscFinalize(void);
128809573ac7SBarry Smith extern PetscErrorCode PetscInitializeFortran(void);
12897087cfbeSBarry Smith extern PetscErrorCode  PetscGetArgs(int*,char ***);
12907087cfbeSBarry Smith extern PetscErrorCode  PetscGetArguments(char ***);
12917087cfbeSBarry Smith extern PetscErrorCode  PetscFreeArguments(char **);
1292d382aafbSBarry Smith 
12937087cfbeSBarry Smith extern PetscErrorCode  PetscEnd(void);
12947087cfbeSBarry Smith extern PetscErrorCode  PetscSysInitializePackage(const char[]);
1295d382aafbSBarry Smith 
1296d382aafbSBarry Smith extern MPI_Comm PETSC_COMM_LOCAL_WORLD;
12977087cfbeSBarry Smith extern PetscErrorCode  PetscOpenMPMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*);
12987087cfbeSBarry Smith extern PetscErrorCode  PetscOpenMPSpawn(PetscMPIInt);
12997087cfbeSBarry Smith extern PetscErrorCode  PetscOpenMPFinalize(void);
13007087cfbeSBarry Smith extern PetscErrorCode  PetscOpenMPRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*);
13017087cfbeSBarry Smith extern PetscErrorCode  PetscOpenMPRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*);
13027087cfbeSBarry Smith extern PetscErrorCode  PetscOpenMPFree(MPI_Comm,void*);
13037087cfbeSBarry Smith extern PetscErrorCode  PetscOpenMPMalloc(MPI_Comm,size_t,void**);
1304d382aafbSBarry Smith 
13057087cfbeSBarry Smith extern PetscErrorCode  PetscPythonInitialize(const char[],const char[]);
13067087cfbeSBarry Smith extern PetscErrorCode  PetscPythonFinalize(void);
13077087cfbeSBarry Smith extern PetscErrorCode  PetscPythonPrintError(void);
13085180491cSLisandro Dalcin extern PetscErrorCode  PetscPythonMonitorSet(PetscObject,const char[]);
1309d382aafbSBarry Smith 
1310d382aafbSBarry Smith /*
1311d382aafbSBarry Smith      These are so that in extern C code we can caste function pointers to non-extern C
1312d382aafbSBarry Smith    function pointers. Since the regular C++ code expects its function pointers to be
1313d382aafbSBarry Smith    C++.
1314d382aafbSBarry Smith */
1315d382aafbSBarry Smith typedef void (**PetscVoidStarFunction)(void);
1316d382aafbSBarry Smith typedef void (*PetscVoidFunction)(void);
1317d382aafbSBarry Smith typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1318d382aafbSBarry Smith 
1319d382aafbSBarry Smith /*
1320d382aafbSBarry Smith    PetscTryMethod - Queries an object for a method, if it exists then calls it.
1321d382aafbSBarry Smith               These are intended to be used only inside PETSc functions.
1322503cfb0cSBarry Smith 
1323503cfb0cSBarry Smith    Level: developer
1324503cfb0cSBarry Smith 
1325503cfb0cSBarry Smith .seealso: PetscUseMethod()
1326d382aafbSBarry Smith */
1327d382aafbSBarry Smith #define  PetscTryMethod(obj,A,B,C) \
1328d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1329d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1330d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1331d382aafbSBarry Smith   }
1332503cfb0cSBarry Smith 
1333503cfb0cSBarry Smith /*
1334503cfb0cSBarry Smith    PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error.
1335503cfb0cSBarry Smith               These are intended to be used only inside PETSc functions.
1336503cfb0cSBarry Smith 
1337503cfb0cSBarry Smith    Level: developer
1338503cfb0cSBarry Smith 
1339503cfb0cSBarry Smith .seealso: PetscTryMethod()
1340503cfb0cSBarry Smith */
1341d382aafbSBarry Smith #define  PetscUseMethod(obj,A,B,C) \
1342d382aafbSBarry Smith   0;{ PetscErrorCode (*f)B, __ierr; \
1343d382aafbSBarry Smith     __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \
1344d382aafbSBarry Smith     if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\
1345703c66c1SJed Brown     else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \
1346d382aafbSBarry Smith   }
1347503cfb0cSBarry Smith 
1348d382aafbSBarry Smith /*
1349d382aafbSBarry Smith     Functions that can act on any PETSc object.
1350d382aafbSBarry Smith */
1351fcfd50ebSBarry Smith extern PetscErrorCode  PetscObjectDestroy(PetscObject*);
13527087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetComm(PetscObject,MPI_Comm *);
13537087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetClassId(PetscObject,PetscClassId *);
1354609db0e0SLisandro Dalcin extern PetscErrorCode  PetscObjectGetClassName(PetscObject,const char *[]);
13557087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetType(PetscObject,const char []);
13567087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetPrecision(PetscObject,PetscPrecision);
13577087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetType(PetscObject,const char *[]);
13587087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetName(PetscObject,const char[]);
13597087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetName(PetscObject,const char*[]);
13607087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]);
13617087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetTabLevel(PetscObject,PetscInt);
13627087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetTabLevel(PetscObject,PetscInt*);
13637087cfbeSBarry Smith extern PetscErrorCode  PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
13647087cfbeSBarry Smith extern PetscErrorCode  PetscObjectReference(PetscObject);
13657087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetReference(PetscObject,PetscInt*);
13667087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDereference(PetscObject);
13677087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
13687087cfbeSBarry Smith extern PetscErrorCode  PetscObjectView(PetscObject,PetscViewer);
13697087cfbeSBarry Smith extern PetscErrorCode  PetscObjectCompose(PetscObject,const char[],PetscObject);
13706ba4bc90SBarry Smith extern PetscErrorCode  PetscObjectRemoveReference(PetscObject,const char[]);
13717087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQuery(PetscObject,const char[],PetscObject *);
13727087cfbeSBarry Smith extern PetscErrorCode  PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void));
13737087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetFromOptions(PetscObject);
13747087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetUp(PetscObject);
13757087cfbeSBarry Smith extern PetscErrorCode  PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
13767087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*);
13777087cfbeSBarry Smith extern PetscErrorCode  PetscObjectProcessOptionsHandlers(PetscObject);
13787087cfbeSBarry Smith extern PetscErrorCode  PetscObjectDestroyOptionsHandlers(PetscObject);
1379d382aafbSBarry Smith 
1380d382aafbSBarry Smith /*MC
1381d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object.
1382d382aafbSBarry Smith 
1383eca87e8dSBarry Smith     Synopsis:
1384eca87e8dSBarry Smith     PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr)
1385eca87e8dSBarry Smith 
1386ad4df100SBarry Smith    Logically Collective on PetscObject
1387d382aafbSBarry Smith 
1388d382aafbSBarry Smith    Input Parameters:
1389d382aafbSBarry Smith +  obj - the PETSc object; this must be cast with a (PetscObject), for example,
1390d382aafbSBarry Smith          PetscObjectCompose((PetscObject)mat,...);
1391d382aafbSBarry Smith .  name - name associated with the child function
1392d382aafbSBarry Smith .  fname - name of the function
1393d382aafbSBarry Smith -  ptr - function pointer (or PETSC_NULL if using dynamic libraries)
1394d382aafbSBarry Smith 
1395d382aafbSBarry Smith    Level: advanced
1396d382aafbSBarry Smith 
1397d382aafbSBarry Smith 
1398d382aafbSBarry Smith    Notes:
1399d382aafbSBarry Smith    To remove a registered routine, pass in a PETSC_NULL rname and fnc().
1400d382aafbSBarry Smith 
1401d382aafbSBarry Smith    PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as
1402d382aafbSBarry Smith    Mat, Vec, KSP, SNES, etc.) or any user-provided object.
1403d382aafbSBarry Smith 
1404d382aafbSBarry Smith    The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to
140520de1f94SBarry Smith    work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading)
1406d382aafbSBarry Smith    enabled.
1407d382aafbSBarry Smith 
1408d382aafbSBarry Smith    Concepts: objects^composing functions
1409d382aafbSBarry Smith    Concepts: composing functions
1410d382aafbSBarry Smith    Concepts: functions^querying
1411d382aafbSBarry Smith    Concepts: objects^querying
1412d382aafbSBarry Smith    Concepts: querying objects
1413d382aafbSBarry Smith 
1414d382aafbSBarry Smith .seealso: PetscObjectQueryFunction()
1415d382aafbSBarry Smith M*/
1416d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1417d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0)
1418d382aafbSBarry Smith #else
1419d382aafbSBarry Smith #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d))
1420d382aafbSBarry Smith #endif
1421d382aafbSBarry Smith 
14227087cfbeSBarry Smith extern PetscErrorCode  PetscObjectQueryFunction(PetscObject,const char[],void (**)(void));
14237087cfbeSBarry Smith extern PetscErrorCode  PetscObjectSetOptionsPrefix(PetscObject,const char[]);
14247087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
14257087cfbeSBarry Smith extern PetscErrorCode  PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
14267087cfbeSBarry Smith extern PetscErrorCode  PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
14277087cfbeSBarry Smith extern PetscErrorCode  PetscObjectAMSPublish(PetscObject);
14287087cfbeSBarry Smith extern PetscErrorCode  PetscObjectUnPublish(PetscObject);
14297087cfbeSBarry Smith extern PetscErrorCode  PetscObjectChangeTypeName(PetscObject,const char[]);
14307087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroy(PetscObject);
14317087cfbeSBarry Smith extern PetscErrorCode  PetscObjectRegisterDestroyAll(void);
14327087cfbeSBarry Smith extern PetscErrorCode  PetscObjectName(PetscObject);
14337087cfbeSBarry Smith extern PetscErrorCode  PetscTypeCompare(PetscObject,const char[],PetscBool *);
14342b12f010SJed Brown extern PetscErrorCode  PetscTypeCompareAny(PetscObject,PetscBool*,const char[],...);
14357087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalize(PetscErrorCode (*)(void));
14367087cfbeSBarry Smith extern PetscErrorCode  PetscRegisterFinalizeAll(void);
1437d382aafbSBarry Smith 
1438d382aafbSBarry Smith /*
1439d382aafbSBarry Smith     Defines PETSc error handling.
1440d382aafbSBarry Smith */
1441d382aafbSBarry Smith #include "petscerror.h"
1442d382aafbSBarry Smith 
1443d382aafbSBarry Smith /*S
1444503cfb0cSBarry Smith      PetscOList - Linked list of PETSc objects, each accessable by string name
1445d382aafbSBarry Smith 
14461d0fab5eSBarry Smith    Level: developer
1447d382aafbSBarry Smith 
14481d0fab5eSBarry Smith    Notes: Used by PetscObjectCompose() and PetscObjectQuery()
14491d0fab5eSBarry Smith 
14501d0fab5eSBarry Smith .seealso:  PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery()
1451d382aafbSBarry Smith S*/
1452d382aafbSBarry Smith typedef struct _n_PetscOList *PetscOList;
1453d382aafbSBarry Smith 
1454fcfd50ebSBarry Smith extern PetscErrorCode  PetscOListDestroy(PetscOList*);
14557087cfbeSBarry Smith extern PetscErrorCode  PetscOListFind(PetscOList,const char[],PetscObject*);
1456*bfec8eecSBarry Smith extern PetscErrorCode  PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*);
14577087cfbeSBarry Smith extern PetscErrorCode  PetscOListAdd(PetscOList *,const char[],PetscObject);
14586ba4bc90SBarry Smith extern PetscErrorCode  PetscOListRemoveReference(PetscOList *,const char[]);
14597087cfbeSBarry Smith extern PetscErrorCode  PetscOListDuplicate(PetscOList,PetscOList *);
1460d382aafbSBarry Smith 
1461d382aafbSBarry Smith /*
1462503cfb0cSBarry Smith     Dynamic library lists. Lists of names of routines in objects or in dynamic
1463d382aafbSBarry Smith   link libraries that will be loaded as needed.
1464d382aafbSBarry Smith */
14657087cfbeSBarry Smith extern PetscErrorCode  PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void));
14667087cfbeSBarry Smith extern PetscErrorCode  PetscFListDestroy(PetscFList*);
14674b91b6eaSBarry Smith extern PetscErrorCode  PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void));
14687087cfbeSBarry Smith extern PetscErrorCode  PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]);
1469d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
1470d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0)
1471d382aafbSBarry Smith #else
1472d382aafbSBarry Smith #define    PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c)
1473d382aafbSBarry Smith #endif
14747087cfbeSBarry Smith extern PetscErrorCode  PetscFListDuplicate(PetscFList,PetscFList *);
14757087cfbeSBarry Smith extern PetscErrorCode  PetscFListView(PetscFList,PetscViewer);
14767087cfbeSBarry Smith extern PetscErrorCode  PetscFListConcat(const char [],const char [],char []);
14777087cfbeSBarry Smith extern PetscErrorCode  PetscFListGet(PetscFList,char ***,int*);
1478d382aafbSBarry Smith 
1479d382aafbSBarry Smith /*S
1480d382aafbSBarry Smith      PetscDLLibrary - Linked list of dynamics libraries to search for functions
1481d382aafbSBarry Smith 
1482d382aafbSBarry Smith    Level: advanced
1483d382aafbSBarry Smith 
148420de1f94SBarry Smith    --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries
1485d382aafbSBarry Smith 
1486d382aafbSBarry Smith .seealso:  PetscDLLibraryOpen()
1487d382aafbSBarry Smith S*/
1488d382aafbSBarry Smith typedef struct _n_PetscDLLibrary *PetscDLLibrary;
14897087cfbeSBarry Smith extern  PetscDLLibrary DLLibrariesLoaded;
14907087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
14917087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
14927087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
14937087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryPrintPath(PetscDLLibrary);
14947087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool  *);
14957087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
14967087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryClose(PetscDLLibrary);
14977087cfbeSBarry Smith extern PetscErrorCode  PetscDLLibraryCCAAppend(MPI_Comm,PetscDLLibrary *,const char[]);
1498d382aafbSBarry Smith 
1499d382aafbSBarry Smith /*
150005846914SDmitry Karpeev   PetscFwk support.  Needs to be documented.
150105846914SDmitry Karpeev   Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc.
150205846914SDmitry Karpeev */
150305846914SDmitry Karpeev #include "petscfwk.h"
150405846914SDmitry Karpeev 
150505846914SDmitry Karpeev /*
1506d382aafbSBarry Smith      Useful utility routines
1507d382aafbSBarry Smith */
15087087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
15097087cfbeSBarry Smith extern PetscErrorCode  PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
15107087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1511d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(MPI_Comm comm),(comm,1))
1512d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseBegin,(void),(PETSC_COMM_WORLD,1))
15137087cfbeSBarry Smith extern PetscErrorCode  PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1514d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(MPI_Comm comm),(comm,1))
1515d382aafbSBarry Smith PetscPolymorphicSubroutine(PetscSequentialPhaseEnd,(void),(PETSC_COMM_WORLD,1))
15167087cfbeSBarry Smith extern PetscErrorCode  PetscBarrier(PetscObject);
15177087cfbeSBarry Smith extern PetscErrorCode  PetscMPIDump(FILE*);
1518d382aafbSBarry Smith 
1519503cfb0cSBarry Smith /*
1520ace3abfcSBarry Smith     PetscNot - negates a logical type value and returns result as a PetscBool
1521503cfb0cSBarry Smith 
1522503cfb0cSBarry Smith     Notes: This is useful in cases like
1523503cfb0cSBarry Smith $     int        *a;
1524ace3abfcSBarry Smith $     PetscBool  flag = PetscNot(a)
1525ace3abfcSBarry Smith      where !a does not return a PetscBool  because we cannot provide a cast from int to PetscBool  in C.
1526503cfb0cSBarry Smith */
1527d382aafbSBarry Smith  #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1528503cfb0cSBarry Smith 
1529d382aafbSBarry Smith /*
1530d382aafbSBarry Smith     Defines basic graphics available from PETSc.
1531d382aafbSBarry Smith */
1532d382aafbSBarry Smith #include "petscdraw.h"
1533d382aafbSBarry Smith 
1534d382aafbSBarry Smith /*
1535d382aafbSBarry Smith     Defines the base data structures for all PETSc objects
1536d382aafbSBarry Smith */
1537d382aafbSBarry Smith #include "private/petscimpl.h"
1538503cfb0cSBarry Smith 
1539238ccf28SShri Abhyankar 
1540d382aafbSBarry Smith /*MC
1541d382aafbSBarry Smith     PetscErrorPrintf - Prints error messages.
1542d382aafbSBarry Smith 
1543d382aafbSBarry Smith    Synopsis:
1544d382aafbSBarry Smith      PetscErrorCode (*PetscErrorPrintf)(const char format[],...);
1545d382aafbSBarry Smith 
1546eca87e8dSBarry Smith     Not Collective
1547eca87e8dSBarry Smith 
1548d382aafbSBarry Smith     Input Parameters:
1549d382aafbSBarry Smith .   format - the usual printf() format string
1550d382aafbSBarry Smith 
1551d382aafbSBarry Smith    Options Database Keys:
1552d382aafbSBarry Smith +    -error_output_stdout - cause error messages to be printed to stdout instead of the
1553d382aafbSBarry Smith          (default) stderr
1554d382aafbSBarry Smith -    -error_output_none to turn off all printing of error messages (does not change the way the
1555d382aafbSBarry Smith           error is handled.)
1556d382aafbSBarry Smith 
1557d382aafbSBarry Smith    Notes: Use
1558d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the
1559d382aafbSBarry Smith $                        error is handled.) and
1560d382aafbSBarry Smith $     PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on
1561c9a19010SBarry Smith $        of you can use your own function
1562d382aafbSBarry Smith 
1563d382aafbSBarry Smith           Use
1564d382aafbSBarry Smith      PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file.
1565d382aafbSBarry Smith      PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file.
1566d382aafbSBarry Smith 
1567d382aafbSBarry Smith           Use
1568d382aafbSBarry Smith       PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print
1569d382aafbSBarry Smith 
1570d382aafbSBarry Smith    Level: developer
1571d382aafbSBarry Smith 
1572d382aafbSBarry Smith     Fortran Note:
1573d382aafbSBarry Smith     This routine is not supported in Fortran.
1574d382aafbSBarry Smith 
1575d382aafbSBarry Smith     Concepts: error messages^printing
1576d382aafbSBarry Smith     Concepts: printing^error messages
1577d382aafbSBarry Smith 
1578c9a19010SBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf()
1579d382aafbSBarry Smith M*/
15807087cfbeSBarry Smith extern  PetscErrorCode (*PetscErrorPrintf)(const char[],...);
1581d382aafbSBarry Smith 
1582d382aafbSBarry Smith /*MC
1583d382aafbSBarry Smith     PetscHelpPrintf - Prints help messages.
1584d382aafbSBarry Smith 
1585d382aafbSBarry Smith    Synopsis:
1586d382aafbSBarry Smith      PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1587d382aafbSBarry Smith 
1588eca87e8dSBarry Smith     Not Collective
1589eca87e8dSBarry Smith 
1590d382aafbSBarry Smith     Input Parameters:
1591d382aafbSBarry Smith .   format - the usual printf() format string
1592d382aafbSBarry Smith 
1593d382aafbSBarry Smith    Level: developer
1594d382aafbSBarry Smith 
1595d382aafbSBarry Smith     Fortran Note:
1596d382aafbSBarry Smith     This routine is not supported in Fortran.
1597d382aafbSBarry Smith 
1598d382aafbSBarry Smith     Concepts: help messages^printing
1599d382aafbSBarry Smith     Concepts: printing^help messages
1600d382aafbSBarry Smith 
1601d382aafbSBarry Smith .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1602d382aafbSBarry Smith M*/
16037087cfbeSBarry Smith extern  PetscErrorCode  (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1604d382aafbSBarry Smith 
1605fcfd50ebSBarry Smith /*
1606fcfd50ebSBarry Smith      Defines PETSc profiling.
1607fcfd50ebSBarry Smith */
1608fcfd50ebSBarry Smith #include "petsclog.h"
1609fcfd50ebSBarry Smith 
1610fcfd50ebSBarry Smith /*
1611fcfd50ebSBarry Smith           For locking, unlocking and destroying AMS memories associated with  PETSc objects. ams.h is included in petscviewer.h
1612fcfd50ebSBarry Smith */
1613fcfd50ebSBarry Smith #if defined(PETSC_HAVE_AMS)
1614fcfd50ebSBarry Smith extern PetscBool  PetscAMSPublishAll;
1615fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)  ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem))
1616fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem))
1617fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)   ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1;
1618fcfd50ebSBarry Smith #else
1619fcfd50ebSBarry Smith #define PetscObjectTakeAccess(obj)   0
1620fcfd50ebSBarry Smith #define PetscObjectGrantAccess(obj)  0
1621fcfd50ebSBarry Smith #define PetscObjectDepublish(obj)      0
1622fcfd50ebSBarry Smith #endif
1623fcfd50ebSBarry Smith 
1624fcfd50ebSBarry Smith /*
1625fcfd50ebSBarry Smith       Simple PETSc parallel IO for ASCII printing
1626fcfd50ebSBarry Smith */
1627fcfd50ebSBarry Smith extern PetscErrorCode   PetscFixFilename(const char[],char[]);
1628fcfd50ebSBarry Smith extern PetscErrorCode   PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1629fcfd50ebSBarry Smith extern PetscErrorCode   PetscFClose(MPI_Comm,FILE*);
1630fcfd50ebSBarry Smith extern PetscErrorCode   PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1631fcfd50ebSBarry Smith extern PetscErrorCode   PetscPrintf(MPI_Comm,const char[],...);
1632fcfd50ebSBarry Smith extern PetscErrorCode   PetscSNPrintf(char*,size_t,const char [],...);
1633fcfd50ebSBarry Smith 
1634fcfd50ebSBarry Smith 
1635fcfd50ebSBarry Smith 
1636fcfd50ebSBarry Smith /* These are used internally by PETSc ASCII IO routines*/
1637fcfd50ebSBarry Smith #include <stdarg.h>
1638fcfd50ebSBarry Smith extern PetscErrorCode   PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list);
1639fcfd50ebSBarry Smith extern PetscErrorCode   (*PetscVFPrintf)(FILE*,const char[],va_list);
1640fcfd50ebSBarry Smith extern PetscErrorCode   PetscVFPrintfDefault(FILE*,const char[],va_list);
1641fcfd50ebSBarry Smith 
1642fcfd50ebSBarry Smith #if defined(PETSC_HAVE_MATLAB_ENGINE)
1643fcfd50ebSBarry Smith extern PetscErrorCode  PetscVFPrintf_Matlab(FILE*,const char[],va_list);
1644fcfd50ebSBarry Smith #endif
1645fcfd50ebSBarry Smith 
164609573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfDefault(const char [],...);
164709573ac7SBarry Smith extern PetscErrorCode  PetscErrorPrintfNone(const char [],...);
164809573ac7SBarry Smith extern PetscErrorCode  PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1649d382aafbSBarry Smith 
1650d382aafbSBarry Smith #if defined(PETSC_HAVE_POPEN)
16517087cfbeSBarry Smith extern PetscErrorCode   PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
16527087cfbeSBarry Smith extern PetscErrorCode   PetscPClose(MPI_Comm,FILE*);
1653d382aafbSBarry Smith #endif
1654d382aafbSBarry Smith 
16557087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedPrintf(MPI_Comm,const char[],...);
16567087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
16577087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFlush(MPI_Comm);
16587087cfbeSBarry Smith extern PetscErrorCode   PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
16597087cfbeSBarry Smith extern PetscErrorCode   PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
16607087cfbeSBarry Smith extern PetscErrorCode   PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
16617087cfbeSBarry Smith extern PetscErrorCode   PetscGetPetscDir(const char*[]);
1662d382aafbSBarry Smith 
16637087cfbeSBarry Smith extern PetscErrorCode   PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1664d382aafbSBarry Smith 
1665d382aafbSBarry Smith /*S
1666d382aafbSBarry Smith      PetscContainer - Simple PETSc object that contains a pointer to any required data
1667d382aafbSBarry Smith 
1668d382aafbSBarry Smith    Level: advanced
1669d382aafbSBarry Smith 
1670d382aafbSBarry Smith .seealso:  PetscObject, PetscContainerCreate()
1671d382aafbSBarry Smith S*/
16727087cfbeSBarry Smith extern PetscClassId  PETSC_CONTAINER_CLASSID;
1673d382aafbSBarry Smith typedef struct _p_PetscContainer*  PetscContainer;
16747087cfbeSBarry Smith extern PetscErrorCode  PetscContainerGetPointer(PetscContainer,void **);
16757087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetPointer(PetscContainer,void *);
1676fcfd50ebSBarry Smith extern PetscErrorCode  PetscContainerDestroy(PetscContainer*);
16777087cfbeSBarry Smith extern PetscErrorCode  PetscContainerCreate(MPI_Comm,PetscContainer *);
16787087cfbeSBarry Smith extern PetscErrorCode  PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1679d382aafbSBarry Smith 
1680d382aafbSBarry Smith /*
1681d382aafbSBarry Smith    For use in debuggers
1682d382aafbSBarry Smith */
16837087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalRank;
16847087cfbeSBarry Smith extern  PetscMPIInt PetscGlobalSize;
16857087cfbeSBarry Smith extern PetscErrorCode  PetscIntView(PetscInt,const PetscInt[],PetscViewer);
16867087cfbeSBarry Smith extern PetscErrorCode  PetscRealView(PetscInt,const PetscReal[],PetscViewer);
16877087cfbeSBarry Smith extern PetscErrorCode  PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1688d382aafbSBarry Smith 
1689d382aafbSBarry Smith #if defined(PETSC_HAVE_MEMORY_H)
1690d382aafbSBarry Smith #include <memory.h>
1691d382aafbSBarry Smith #endif
1692d382aafbSBarry Smith #if defined(PETSC_HAVE_STDLIB_H)
1693d382aafbSBarry Smith #include <stdlib.h>
1694d382aafbSBarry Smith #endif
1695d382aafbSBarry Smith #if defined(PETSC_HAVE_STRINGS_H)
1696d382aafbSBarry Smith #include <strings.h>
1697d382aafbSBarry Smith #endif
1698d382aafbSBarry Smith #if defined(PETSC_HAVE_STRING_H)
1699d382aafbSBarry Smith #include <string.h>
1700d382aafbSBarry Smith #endif
17016c7e564aSBarry Smith 
17026c7e564aSBarry Smith 
1703d382aafbSBarry Smith #if defined(PETSC_HAVE_XMMINTRIN_H)
1704d382aafbSBarry Smith #include <xmmintrin.h>
1705d382aafbSBarry Smith #endif
1706d382aafbSBarry Smith #if defined(PETSC_HAVE_STDINT_H)
1707d382aafbSBarry Smith #include <stdint.h>
1708d382aafbSBarry Smith #endif
1709d382aafbSBarry Smith 
1710fcfd50ebSBarry Smith #undef __FUNCT__
1711fcfd50ebSBarry Smith #define __FUNCT__ "PetscMemcpy"
1712d382aafbSBarry Smith /*@C
1713d382aafbSBarry Smith    PetscMemcpy - Copies n bytes, beginning at location b, to the space
1714d382aafbSBarry Smith    beginning at location a. The two memory regions CANNOT overlap, use
1715d382aafbSBarry Smith    PetscMemmove() in that case.
1716d382aafbSBarry Smith 
1717d382aafbSBarry Smith    Not Collective
1718d382aafbSBarry Smith 
1719d382aafbSBarry Smith    Input Parameters:
1720d382aafbSBarry Smith +  b - pointer to initial memory space
1721d382aafbSBarry Smith -  n - length (in bytes) of space to copy
1722d382aafbSBarry Smith 
1723d382aafbSBarry Smith    Output Parameter:
1724d382aafbSBarry Smith .  a - pointer to copy space
1725d382aafbSBarry Smith 
1726d382aafbSBarry Smith    Level: intermediate
1727d382aafbSBarry Smith 
1728d382aafbSBarry Smith    Compile Option:
1729d382aafbSBarry Smith     PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1730d382aafbSBarry Smith                                   for memory copies on double precision values.
1731d382aafbSBarry Smith     PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1732d382aafbSBarry Smith                                   for memory copies on double precision values.
1733d382aafbSBarry Smith     PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1734d382aafbSBarry Smith                                   for memory copies on double precision values.
1735d382aafbSBarry Smith 
1736d382aafbSBarry Smith    Note:
1737d382aafbSBarry Smith    This routine is analogous to memcpy().
1738d382aafbSBarry Smith 
1739503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1740503cfb0cSBarry Smith 
1741d382aafbSBarry Smith   Concepts: memory^copying
1742d382aafbSBarry Smith   Concepts: copying^memory
1743d382aafbSBarry Smith 
1744d382aafbSBarry Smith .seealso: PetscMemmove()
1745d382aafbSBarry Smith 
1746d382aafbSBarry Smith @*/
17477087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemcpy(void *a,const void *b,size_t n)
1748d382aafbSBarry Smith {
1749d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1750d382aafbSBarry Smith   unsigned long al = (unsigned long) a,bl = (unsigned long) b;
1751d382aafbSBarry Smith   unsigned long nl = (unsigned long) n;
1752a7e36092SMatthew G Knepley   PetscFunctionBegin;
1753e32f2f54SBarry Smith   if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
1754e32f2f54SBarry Smith   if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
1755a7e36092SMatthew G Knepley #else
1756d382aafbSBarry Smith   PetscFunctionBegin;
1757a7e36092SMatthew G Knepley #endif
1758d382aafbSBarry Smith   if (a != b) {
1759d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1760d382aafbSBarry Smith     if ((al > bl && (al - bl) < nl) || (bl - al) < nl) {
1761e32f2f54SBarry Smith       SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
1762d382aafbSBarry Smith               or make sure your copy regions and lengths are correct. \n\
1763d382aafbSBarry Smith               Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
1764d382aafbSBarry Smith     }
1765d382aafbSBarry Smith #endif
1766d382aafbSBarry Smith #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
1767d382aafbSBarry Smith    if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1768d382aafbSBarry Smith       size_t len = n/sizeof(PetscScalar);
1769d382aafbSBarry Smith #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
1770d382aafbSBarry Smith       PetscBLASInt one = 1,blen = PetscBLASIntCast(len);
1771d382aafbSBarry Smith       BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one);
1772d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
1773d382aafbSBarry Smith       fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
1774d382aafbSBarry Smith #else
1775d382aafbSBarry Smith       size_t      i;
1776d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
1777d382aafbSBarry Smith       for (i=0; i<len; i++) y[i] = x[i];
1778d382aafbSBarry Smith #endif
1779d382aafbSBarry Smith     } else {
1780d382aafbSBarry Smith       memcpy((char*)(a),(char*)(b),n);
1781d382aafbSBarry Smith     }
1782d382aafbSBarry Smith #else
1783d382aafbSBarry Smith     memcpy((char*)(a),(char*)(b),n);
1784d382aafbSBarry Smith #endif
1785d382aafbSBarry Smith   }
1786d382aafbSBarry Smith   PetscFunctionReturn(0);
1787d382aafbSBarry Smith }
1788d382aafbSBarry Smith 
1789d382aafbSBarry Smith /*@C
1790d382aafbSBarry Smith    PetscMemzero - Zeros the specified memory.
1791d382aafbSBarry Smith 
1792d382aafbSBarry Smith    Not Collective
1793d382aafbSBarry Smith 
1794d382aafbSBarry Smith    Input Parameters:
1795d382aafbSBarry Smith +  a - pointer to beginning memory location
1796d382aafbSBarry Smith -  n - length (in bytes) of memory to initialize
1797d382aafbSBarry Smith 
1798d382aafbSBarry Smith    Level: intermediate
1799d382aafbSBarry Smith 
1800d382aafbSBarry Smith    Compile Option:
1801d382aafbSBarry Smith    PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
1802d382aafbSBarry Smith   to be faster than the memset() routine. This flag causes the bzero() routine to be used.
1803d382aafbSBarry Smith 
1804503cfb0cSBarry Smith    Developer Note: this is inlined for fastest performance
1805503cfb0cSBarry Smith 
1806d382aafbSBarry Smith    Concepts: memory^zeroing
1807d382aafbSBarry Smith    Concepts: zeroing^memory
1808d382aafbSBarry Smith 
1809d382aafbSBarry Smith .seealso: PetscMemcpy()
1810d382aafbSBarry Smith @*/
18117087cfbeSBarry Smith PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)
1812d382aafbSBarry Smith {
1813d382aafbSBarry Smith   if (n > 0) {
1814d382aafbSBarry Smith #if defined(PETSC_USE_DEBUG)
1815e32f2f54SBarry Smith     if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
1816d382aafbSBarry Smith #endif
1817d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
1818d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1819d382aafbSBarry Smith       size_t      i,len = n/sizeof(PetscScalar);
1820d382aafbSBarry Smith       PetscScalar *x = (PetscScalar*)a;
1821d382aafbSBarry Smith       for (i=0; i<len; i++) x[i] = 0.0;
1822d382aafbSBarry Smith     } else {
1823d382aafbSBarry Smith #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1824d382aafbSBarry Smith     if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
1825d382aafbSBarry Smith       PetscInt len = n/sizeof(PetscScalar);
1826d382aafbSBarry Smith       fortranzero_(&len,(PetscScalar*)a);
1827d382aafbSBarry Smith     } else {
1828d382aafbSBarry Smith #endif
1829d382aafbSBarry Smith #if defined(PETSC_PREFER_BZERO)
1830d382aafbSBarry Smith       bzero((char *)a,n);
1831d382aafbSBarry Smith #else
1832d382aafbSBarry Smith       memset((char*)a,0,n);
1833d382aafbSBarry Smith #endif
1834d382aafbSBarry Smith #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
1835d382aafbSBarry Smith     }
1836d382aafbSBarry Smith #endif
1837d382aafbSBarry Smith   }
1838d382aafbSBarry Smith   return 0;
1839d382aafbSBarry Smith }
1840d382aafbSBarry Smith 
1841d382aafbSBarry Smith /*MC
1842d382aafbSBarry Smith    PetscPrefetchBlock - Prefetches a block of memory
1843d382aafbSBarry Smith 
1844eca87e8dSBarry Smith    Synopsis:
1845eca87e8dSBarry Smith     void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
1846eca87e8dSBarry Smith 
1847d382aafbSBarry Smith    Not Collective
1848d382aafbSBarry Smith 
1849d382aafbSBarry Smith    Input Parameters:
1850d382aafbSBarry Smith +  a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
1851d382aafbSBarry Smith .  n - number of elements to fetch
1852d382aafbSBarry Smith .  rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
185350d8bf02SJed Brown -  t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
1854d382aafbSBarry Smith 
1855d382aafbSBarry Smith    Level: developer
1856d382aafbSBarry Smith 
1857d382aafbSBarry Smith    Notes:
1858d382aafbSBarry Smith    The last two arguments (rw and t) must be compile-time constants.
1859d382aafbSBarry Smith 
186050d8bf02SJed Brown    Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality.  Not all architectures offer
186150d8bf02SJed Brown    equivalent locality hints, but the following macros are always defined to their closest analogue.
186250d8bf02SJed Brown +  PETSC_PREFETCH_HINT_NTA - Non-temporal.  Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
186363cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level.  Use this when the memory will be reused regularly despite necessary eviction from L1.
186463cf1ef0SJed Brown .  PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
186563cf1ef0SJed Brown -  PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only.  (On many systems, T0 and T1 are equivalent.)
1866d382aafbSBarry Smith 
1867d382aafbSBarry Smith    This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
1868d382aafbSBarry Smith    address).
1869d382aafbSBarry Smith 
1870d382aafbSBarry Smith    Concepts: memory
1871d382aafbSBarry Smith M*/
1872d382aafbSBarry Smith #define PetscPrefetchBlock(a,n,rw,t) do {                               \
1873d382aafbSBarry Smith     const char *_p = (const char*)(a),*_end = (const char*)((a)+(n));   \
1874d382aafbSBarry Smith     for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
1875d382aafbSBarry Smith   } while (0)
1876d382aafbSBarry Smith 
1877d382aafbSBarry Smith /*
1878e3c5b3baSBarry Smith     Allows accessing MATLAB Engine
1879d382aafbSBarry Smith */
1880d382aafbSBarry Smith #include "petscmatlab.h"
1881d382aafbSBarry Smith 
1882d382aafbSBarry Smith /*
1883d382aafbSBarry Smith       Determine if some of the kernel computation routines use
1884d382aafbSBarry Smith    Fortran (rather than C) for the numerical calculations. On some machines
1885d382aafbSBarry Smith    and compilers (like complex numbers) the Fortran version of the routines
1886d382aafbSBarry Smith    is faster than the C/C++ versions. The flag --with-fortran-kernels
1887e2e64c6bSBarry Smith    should be used with ./configure to turn these on.
1888d382aafbSBarry Smith */
1889d382aafbSBarry Smith #if defined(PETSC_USE_FORTRAN_KERNELS)
1890d382aafbSBarry Smith 
1891d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
1892d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
1893d382aafbSBarry Smith #endif
1894d382aafbSBarry Smith 
18955a11e1b2SBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
18965a11e1b2SBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
1897d382aafbSBarry Smith #endif
1898d382aafbSBarry Smith 
1899d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
1900d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
1901d382aafbSBarry Smith #endif
1902d382aafbSBarry Smith 
1903d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
1904d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
1905d382aafbSBarry Smith #endif
1906d382aafbSBarry Smith 
1907d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
1908d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_NORM
1909d382aafbSBarry Smith #endif
1910d382aafbSBarry Smith 
1911d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
1912d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MAXPY
1913d382aafbSBarry Smith #endif
1914d382aafbSBarry Smith 
1915d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
1916d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
1917d382aafbSBarry Smith #endif
1918d382aafbSBarry Smith 
1919d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
1920d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
1921d382aafbSBarry Smith #endif
1922d382aafbSBarry Smith 
1923d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
1924d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
1925d382aafbSBarry Smith #endif
1926d382aafbSBarry Smith 
1927d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
1928d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
1929d382aafbSBarry Smith #endif
1930d382aafbSBarry Smith 
1931d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
1932d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_MDOT
1933d382aafbSBarry Smith #endif
1934d382aafbSBarry Smith 
1935d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
1936d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
1937d382aafbSBarry Smith #endif
1938d382aafbSBarry Smith 
1939d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
1940d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_AYPX
1941d382aafbSBarry Smith #endif
1942d382aafbSBarry Smith 
1943d382aafbSBarry Smith #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
1944d382aafbSBarry Smith #define PETSC_USE_FORTRAN_KERNEL_WAXPY
1945d382aafbSBarry Smith #endif
1946d382aafbSBarry Smith 
1947d382aafbSBarry Smith #endif
1948d382aafbSBarry Smith 
1949d382aafbSBarry Smith /*
1950d382aafbSBarry Smith     Macros for indicating code that should be compiled with a C interface,
1951d382aafbSBarry Smith    rather than a C++ interface. Any routines that are dynamically loaded
1952d382aafbSBarry Smith    (such as the PCCreate_XXX() routines) must be wrapped so that the name
1953d382aafbSBarry Smith    mangler does not change the functions symbol name. This just hides the
1954d382aafbSBarry Smith    ugly extern "C" {} wrappers.
1955d382aafbSBarry Smith */
1956d382aafbSBarry Smith #if defined(__cplusplus)
1957d382aafbSBarry Smith #define EXTERN_C_BEGIN extern "C" {
1958d382aafbSBarry Smith #define EXTERN_C_END }
1959d382aafbSBarry Smith #else
1960d382aafbSBarry Smith #define EXTERN_C_BEGIN
1961d382aafbSBarry Smith #define EXTERN_C_END
1962d382aafbSBarry Smith #endif
1963d382aafbSBarry Smith 
1964d382aafbSBarry Smith /* --------------------------------------------------------------------*/
1965d382aafbSBarry Smith 
1966d382aafbSBarry Smith /*MC
1967d382aafbSBarry Smith     MPI_Comm - the basic object used by MPI to determine which processes are involved in a
1968d382aafbSBarry Smith         communication
1969d382aafbSBarry Smith 
1970d382aafbSBarry Smith    Level: beginner
1971d382aafbSBarry Smith 
1972d382aafbSBarry Smith    Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
1973d382aafbSBarry Smith 
1974d382aafbSBarry Smith .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
1975d382aafbSBarry Smith M*/
1976d382aafbSBarry Smith 
1977d382aafbSBarry Smith /*MC
1978d382aafbSBarry Smith     PetscScalar - PETSc type that represents either a double precision real number, a double precision
1979d382aafbSBarry Smith        complex number, a single precision real number, a long double or an int - if the code is configured
1980d382aafbSBarry Smith        with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle
1981d382aafbSBarry Smith 
1982d382aafbSBarry Smith 
1983d382aafbSBarry Smith    Level: beginner
1984d382aafbSBarry Smith 
1985d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt
1986d382aafbSBarry Smith M*/
1987d382aafbSBarry Smith 
1988d382aafbSBarry Smith /*MC
1989d382aafbSBarry Smith     PetscReal - PETSc type that represents a real number version of PetscScalar
1990d382aafbSBarry Smith 
1991d382aafbSBarry Smith    Level: beginner
1992d382aafbSBarry Smith 
1993d382aafbSBarry Smith .seealso: PetscScalar, PassiveReal, PassiveScalar
1994d382aafbSBarry Smith M*/
1995d382aafbSBarry Smith 
1996d382aafbSBarry Smith /*MC
1997d382aafbSBarry Smith     PassiveScalar - PETSc type that represents a PetscScalar
1998d382aafbSBarry Smith    Level: beginner
1999d382aafbSBarry Smith 
2000d382aafbSBarry Smith     This is the same as a PetscScalar except in code that is automatically differentiated it is
2001d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
2002d382aafbSBarry Smith 
2003d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PetscScalar
2004d382aafbSBarry Smith M*/
2005d382aafbSBarry Smith 
2006d382aafbSBarry Smith /*MC
2007d382aafbSBarry Smith     PassiveReal - PETSc type that represents a PetscReal
2008d382aafbSBarry Smith 
2009d382aafbSBarry Smith    Level: beginner
2010d382aafbSBarry Smith 
2011d382aafbSBarry Smith     This is the same as a PetscReal except in code that is automatically differentiated it is
2012d382aafbSBarry Smith    treated as a constant (not an indendent or dependent variable)
2013d382aafbSBarry Smith 
2014d382aafbSBarry Smith .seealso: PetscScalar, PetscReal, PassiveScalar
2015d382aafbSBarry Smith M*/
2016d382aafbSBarry Smith 
2017d382aafbSBarry Smith /*MC
2018d382aafbSBarry Smith     MPIU_SCALAR - MPI datatype corresponding to PetscScalar
2019d382aafbSBarry Smith 
2020d382aafbSBarry Smith    Level: beginner
2021d382aafbSBarry Smith 
2022d382aafbSBarry Smith     Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars
2023d382aafbSBarry Smith           pass this value
2024d382aafbSBarry Smith 
2025d382aafbSBarry Smith .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT
2026d382aafbSBarry Smith M*/
2027d382aafbSBarry Smith 
2028d382aafbSBarry Smith #if defined(PETSC_HAVE_MPIIO)
2029d382aafbSBarry Smith #if !defined(PETSC_WORDS_BIGENDIAN)
2030d382aafbSBarry Smith extern PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2031d382aafbSBarry Smith extern PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2032d382aafbSBarry Smith #else
2033d382aafbSBarry Smith #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
2034d382aafbSBarry Smith #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
2035d382aafbSBarry Smith #endif
2036d382aafbSBarry Smith #endif
2037d382aafbSBarry Smith 
2038d382aafbSBarry Smith /* the following petsc_static_inline require petscerror.h */
2039d382aafbSBarry Smith 
2040d382aafbSBarry Smith /* Limit MPI to 32-bits */
2041d382aafbSBarry Smith #define PETSC_MPI_INT_MAX  2147483647
2042d382aafbSBarry Smith #define PETSC_MPI_INT_MIN -2147483647
2043d382aafbSBarry Smith /* Limit BLAS to 32-bits */
2044d382aafbSBarry Smith #define PETSC_BLAS_INT_MAX  2147483647
2045d382aafbSBarry Smith #define PETSC_BLAS_INT_MIN -2147483647
2046d382aafbSBarry Smith /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */
2047d382aafbSBarry Smith #define PETSC_HDF5_INT_MAX  2147483647
2048d382aafbSBarry Smith #define PETSC_HDF5_INT_MIN -2147483647
2049d382aafbSBarry Smith 
2050d382aafbSBarry Smith #if defined(PETSC_USE_64BIT_INDICES)
2051e32f2f54SBarry Smith #define PetscMPIIntCheck(a)  if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI")
2052e32f2f54SBarry Smith #define PetscBLASIntCheck(a)  if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK")
2053eb10ad5fSJed Brown #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a)
2054eb10ad5fSJed Brown #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a)
2055d382aafbSBarry Smith 
2056d382aafbSBarry Smith #if (PETSC_SIZEOF_SIZE_T == 4)
2057e32f2f54SBarry Smith #define PetscHDF5IntCheck(a)  if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5")
2058eb10ad5fSJed Brown #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a)
2059d382aafbSBarry Smith #else
2060d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2061d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2062d382aafbSBarry Smith #endif
2063d382aafbSBarry Smith 
2064d382aafbSBarry Smith #else
2065d382aafbSBarry Smith #define PetscMPIIntCheck(a)
2066d382aafbSBarry Smith #define PetscBLASIntCheck(a)
2067d382aafbSBarry Smith #define PetscHDF5IntCheck(a)
2068d382aafbSBarry Smith #define PetscMPIIntCast(a) a
2069d382aafbSBarry Smith #define PetscBLASIntCast(a) a
2070d382aafbSBarry Smith #define PetscHDF5IntCast(a) a
2071d382aafbSBarry Smith #endif
2072d382aafbSBarry Smith 
2073d382aafbSBarry Smith 
2074d382aafbSBarry Smith /*
2075d382aafbSBarry Smith      The IBM include files define hz, here we hide it so that it may be used
2076d382aafbSBarry Smith    as a regular user variable.
2077d382aafbSBarry Smith */
2078d382aafbSBarry Smith #if defined(hz)
2079d382aafbSBarry Smith #undef hz
2080d382aafbSBarry Smith #endif
2081d382aafbSBarry Smith 
2082d382aafbSBarry Smith /*  For arrays that contain filenames or paths */
2083d382aafbSBarry Smith 
2084d382aafbSBarry Smith 
2085d382aafbSBarry Smith #if defined(PETSC_HAVE_LIMITS_H)
2086d382aafbSBarry Smith #include <limits.h>
2087d382aafbSBarry Smith #endif
2088d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_PARAM_H)
2089d382aafbSBarry Smith #include <sys/param.h>
2090d382aafbSBarry Smith #endif
2091d382aafbSBarry Smith #if defined(PETSC_HAVE_SYS_TYPES_H)
2092d382aafbSBarry Smith #include <sys/types.h>
2093d382aafbSBarry Smith #endif
2094d382aafbSBarry Smith #if defined(MAXPATHLEN)
2095d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAXPATHLEN
2096d382aafbSBarry Smith #elif defined(MAX_PATH)
2097d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     MAX_PATH
2098d382aafbSBarry Smith #elif defined(_MAX_PATH)
2099d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     _MAX_PATH
2100d382aafbSBarry Smith #else
2101d382aafbSBarry Smith #  define PETSC_MAX_PATH_LEN     4096
2102d382aafbSBarry Smith #endif
2103d382aafbSBarry Smith 
2104d382aafbSBarry Smith /* Special support for C++ */
2105d382aafbSBarry Smith #include "petscsys.hh"
21066c7e564aSBarry Smith 
2107d382aafbSBarry Smith 
2108d382aafbSBarry Smith /*MC
2109d382aafbSBarry Smith 
2110d382aafbSBarry Smith     UsingFortran - Fortran can be used with PETSc in four distinct approaches
2111d382aafbSBarry Smith 
2112d382aafbSBarry Smith $    1) classic Fortran 77 style
2113d1716517SSatish Balay $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc
2114d382aafbSBarry Smith $       XXX variablename
2115d382aafbSBarry Smith $      You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines
2116d382aafbSBarry Smith $      which end in F90; such as VecGetArrayF90()
2117d382aafbSBarry Smith $
2118d382aafbSBarry Smith $    2) classic Fortran 90 style
2119d1716517SSatish Balay $#include "finclude/petscXXX.h"
2120d1716517SSatish Balay $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc
2121d382aafbSBarry Smith $       XXX variablename
2122d382aafbSBarry Smith $
2123d382aafbSBarry Smith $    3) Using Fortran modules
2124d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2125d382aafbSBarry Smith $         use petscXXXX
2126d382aafbSBarry Smith $       XXX variablename
2127d382aafbSBarry Smith $
2128d382aafbSBarry Smith $    4) Use Fortran modules and Fortran data types for PETSc types
2129d1716517SSatish Balay $#include "finclude/petscXXXdef.h"
2130d382aafbSBarry Smith $         use petscXXXX
2131d382aafbSBarry Smith $       type(XXX) variablename
2132e2e64c6bSBarry Smith $      To use this approach you must ./configure PETSc with the additional
2133d382aafbSBarry Smith $      option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules
2134d382aafbSBarry Smith 
2135d382aafbSBarry Smith     Finally if you absolutely do not want to use any #include you can use either
2136d382aafbSBarry Smith 
2137d382aafbSBarry Smith $    3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc
2138d382aafbSBarry Smith $        and you must declare the variables as integer, for example
2139d382aafbSBarry Smith $        integer variablename
2140d382aafbSBarry Smith $
2141d382aafbSBarry Smith $    4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type
2142d382aafbSBarry Smith $        names like PetscErrorCode, PetscInt etc. again for those you must use integer
2143d382aafbSBarry Smith 
2144d382aafbSBarry Smith    We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking
2145d382aafbSBarry Smith for only a few PETSc functions.
2146d382aafbSBarry Smith 
2147d382aafbSBarry Smith    Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value
2148d382aafbSBarry Smith is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues()
2149d382aafbSBarry Smith you cannot have something like
2150d382aafbSBarry Smith $      PetscInt row,col
2151d382aafbSBarry Smith $      PetscScalar val
2152d382aafbSBarry Smith $        ...
2153d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2154d382aafbSBarry Smith You must instead have
2155d382aafbSBarry Smith $      PetscInt row(1),col(1)
2156d382aafbSBarry Smith $      PetscScalar val(1)
2157d382aafbSBarry Smith $        ...
2158d382aafbSBarry Smith $      call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
2159d382aafbSBarry Smith 
2160d382aafbSBarry Smith 
2161d382aafbSBarry Smith     See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches
2162d382aafbSBarry Smith 
2163d382aafbSBarry Smith     Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these
2164d382aafbSBarry Smith      automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h
2165d382aafbSBarry Smith 
2166d382aafbSBarry Smith      The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include
2167d382aafbSBarry Smith      their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors;  for example
2168d382aafbSBarry Smith      finclude/petscvec.h does NOT automatically include finclude/petscis.h
2169d382aafbSBarry Smith 
2170d382aafbSBarry Smith      The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the
2171e2e64c6bSBarry Smith      Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option.
2172d382aafbSBarry Smith 
2173d382aafbSBarry Smith      The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for
2174d382aafbSBarry Smith      the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90).
2175d382aafbSBarry Smith 
2176d382aafbSBarry Smith      The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated
2177d382aafbSBarry Smith      automatically by "make allfortranstubs".
2178d382aafbSBarry Smith 
2179e2e64c6bSBarry Smith      The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure
2180d382aafbSBarry Smith      was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
2181d382aafbSBarry Smith      include their predecessors
2182d382aafbSBarry Smith 
2183d382aafbSBarry Smith     Level: beginner
2184d382aafbSBarry Smith 
2185d382aafbSBarry Smith M*/
2186d382aafbSBarry Smith 
21877087cfbeSBarry Smith extern PetscErrorCode  PetscGetArchType(char[],size_t);
21887087cfbeSBarry Smith extern PetscErrorCode  PetscGetHostName(char[],size_t);
21897087cfbeSBarry Smith extern PetscErrorCode  PetscGetUserName(char[],size_t);
21907087cfbeSBarry Smith extern PetscErrorCode  PetscGetProgramName(char[],size_t);
21917087cfbeSBarry Smith extern PetscErrorCode  PetscSetProgramName(const char[]);
21927087cfbeSBarry Smith extern PetscErrorCode  PetscGetDate(char[],size_t);
2193d382aafbSBarry Smith 
21947087cfbeSBarry Smith extern PetscErrorCode  PetscSortInt(PetscInt,PetscInt[]);
21957087cfbeSBarry Smith extern PetscErrorCode  PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
21967087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
21977087cfbeSBarry Smith extern PetscErrorCode  PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
21987087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
21997087cfbeSBarry Smith extern PetscErrorCode  PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
22007087cfbeSBarry Smith extern PetscErrorCode  PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
22017087cfbeSBarry Smith extern PetscErrorCode  PetscSortReal(PetscInt,PetscReal[]);
22027087cfbeSBarry Smith extern PetscErrorCode  PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
22037087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
22047087cfbeSBarry Smith extern PetscErrorCode  PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
22057087cfbeSBarry Smith extern PetscErrorCode  PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
2206d382aafbSBarry Smith 
22077087cfbeSBarry Smith extern PetscErrorCode  PetscSetDisplay(void);
22087087cfbeSBarry Smith extern PetscErrorCode  PetscGetDisplay(char[],size_t);
2209d382aafbSBarry Smith 
2210d382aafbSBarry Smith /*E
2211d382aafbSBarry Smith     PetscRandomType - String with the name of a PETSc randomizer
2212d382aafbSBarry Smith        with an optional dynamic library name, for example
2213d382aafbSBarry Smith        http://www.mcs.anl.gov/petsc/lib.a:myrandcreate()
2214d382aafbSBarry Smith 
2215d382aafbSBarry Smith    Level: beginner
2216d382aafbSBarry Smith 
2217e2e64c6bSBarry Smith    Notes: to use the SPRNG you must have ./configure PETSc
2218d382aafbSBarry Smith    with the option --download-sprng
2219d382aafbSBarry Smith 
2220d382aafbSBarry Smith .seealso: PetscRandomSetType(), PetscRandom
2221d382aafbSBarry Smith E*/
2222d382aafbSBarry Smith #define PetscRandomType char*
2223d382aafbSBarry Smith #define PETSCRAND       "rand"
2224d382aafbSBarry Smith #define PETSCRAND48     "rand48"
2225d382aafbSBarry Smith #define PETSCSPRNG      "sprng"
2226d382aafbSBarry Smith 
2227d382aafbSBarry Smith /* Logging support */
22287087cfbeSBarry Smith extern  PetscClassId PETSC_RANDOM_CLASSID;
2229d382aafbSBarry Smith 
22307087cfbeSBarry Smith extern PetscErrorCode  PetscRandomInitializePackage(const char[]);
2231d382aafbSBarry Smith 
2232d382aafbSBarry Smith /*S
2233d382aafbSBarry Smith      PetscRandom - Abstract PETSc object that manages generating random numbers
2234d382aafbSBarry Smith 
2235d382aafbSBarry Smith    Level: intermediate
2236d382aafbSBarry Smith 
2237d382aafbSBarry Smith   Concepts: random numbers
2238d382aafbSBarry Smith 
2239d382aafbSBarry Smith .seealso:  PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2240d382aafbSBarry Smith S*/
2241d382aafbSBarry Smith typedef struct _p_PetscRandom*   PetscRandom;
2242d382aafbSBarry Smith 
2243d382aafbSBarry Smith /* Dynamic creation and loading functions */
2244d382aafbSBarry Smith extern PetscFList PetscRandomList;
2245ace3abfcSBarry Smith extern PetscBool  PetscRandomRegisterAllCalled;
2246d382aafbSBarry Smith 
22477087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterAll(const char []);
22487087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom));
22497087cfbeSBarry Smith extern PetscErrorCode  PetscRandomRegisterDestroy(void);
22507087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetType(PetscRandom, const PetscRandomType);
22517087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetFromOptions(PetscRandom);
22527087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetType(PetscRandom, const PetscRandomType*);
22537087cfbeSBarry Smith extern PetscErrorCode  PetscRandomViewFromOptions(PetscRandom,char*);
22547087cfbeSBarry Smith extern PetscErrorCode  PetscRandomView(PetscRandom,PetscViewer);
2255d382aafbSBarry Smith 
2256d382aafbSBarry Smith /*MC
2257d382aafbSBarry Smith   PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation
2258d382aafbSBarry Smith 
2259d382aafbSBarry Smith   Synopsis:
22601890ba74SBarry Smith   PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom))
2261d382aafbSBarry Smith 
2262d382aafbSBarry Smith   Not Collective
2263d382aafbSBarry Smith 
2264d382aafbSBarry Smith   Input Parameters:
2265d382aafbSBarry Smith + name        - The name of a new user-defined creation routine
2266d382aafbSBarry Smith . path        - The path (either absolute or relative) of the library containing this routine
2267d382aafbSBarry Smith . func_name   - The name of routine to create method context
2268d382aafbSBarry Smith - create_func - The creation routine itself
2269d382aafbSBarry Smith 
2270d382aafbSBarry Smith   Notes:
2271d382aafbSBarry Smith   PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators
2272d382aafbSBarry Smith 
2273d382aafbSBarry Smith   If dynamic libraries are used, then the fourth input argument (routine_create) is ignored.
2274d382aafbSBarry Smith 
2275d382aafbSBarry Smith   Sample usage:
2276d382aafbSBarry Smith .vb
2277d382aafbSBarry Smith     PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate);
2278d382aafbSBarry Smith .ve
2279d382aafbSBarry Smith 
2280d382aafbSBarry Smith   Then, your random type can be chosen with the procedural interface via
2281d382aafbSBarry Smith .vb
2282d382aafbSBarry Smith     PetscRandomCreate(MPI_Comm, PetscRandom *);
2283d382aafbSBarry Smith     PetscRandomSetType(PetscRandom,"my_random_name");
2284d382aafbSBarry Smith .ve
2285d382aafbSBarry Smith    or at runtime via the option
2286d382aafbSBarry Smith .vb
2287d382aafbSBarry Smith     -random_type my_random_name
2288d382aafbSBarry Smith .ve
2289d382aafbSBarry Smith 
2290d382aafbSBarry Smith   Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values.
2291d382aafbSBarry Smith 
2292d382aafbSBarry Smith          For an example of the code needed to interface your own random number generator see
2293d382aafbSBarry Smith          src/sys/random/impls/rand/rand.c
2294d382aafbSBarry Smith 
2295d382aafbSBarry Smith   Level: advanced
2296d382aafbSBarry Smith 
2297d382aafbSBarry Smith .keywords: PetscRandom, register
2298d382aafbSBarry Smith .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister()
2299d382aafbSBarry Smith M*/
2300d382aafbSBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
2301d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0)
2302d382aafbSBarry Smith #else
2303d382aafbSBarry Smith #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d)
2304d382aafbSBarry Smith #endif
2305d382aafbSBarry Smith 
23067087cfbeSBarry Smith extern PetscErrorCode  PetscRandomCreate(MPI_Comm,PetscRandom*);
23077087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValue(PetscRandom,PetscScalar*);
23087087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetValueReal(PetscRandom,PetscReal*);
23097087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
23107087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
23117087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSetSeed(PetscRandom,unsigned long);
23127087cfbeSBarry Smith extern PetscErrorCode  PetscRandomGetSeed(PetscRandom,unsigned long *);
23137087cfbeSBarry Smith extern PetscErrorCode  PetscRandomSeed(PetscRandom);
2314fcfd50ebSBarry Smith extern PetscErrorCode  PetscRandomDestroy(PetscRandom*);
2315d382aafbSBarry Smith 
23167087cfbeSBarry Smith extern PetscErrorCode  PetscGetFullPath(const char[],char[],size_t);
23177087cfbeSBarry Smith extern PetscErrorCode  PetscGetRelativePath(const char[],char[],size_t);
23187087cfbeSBarry Smith extern PetscErrorCode  PetscGetWorkingDirectory(char[],size_t);
23197087cfbeSBarry Smith extern PetscErrorCode  PetscGetRealPath(const char[],char[]);
23207087cfbeSBarry Smith extern PetscErrorCode  PetscGetHomeDirectory(char[],size_t);
23217087cfbeSBarry Smith extern PetscErrorCode  PetscTestFile(const char[],char,PetscBool *);
23227087cfbeSBarry Smith extern PetscErrorCode  PetscTestDirectory(const char[],char,PetscBool *);
2323d382aafbSBarry Smith 
23247087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryRead(int,void*,PetscInt,PetscDataType);
23257087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
23267087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
23277087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
23287087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryOpen(const char[],PetscFileMode,int *);
23297087cfbeSBarry Smith extern PetscErrorCode  PetscBinaryClose(int);
23307087cfbeSBarry Smith extern PetscErrorCode  PetscSharedTmp(MPI_Comm,PetscBool  *);
23317087cfbeSBarry Smith extern PetscErrorCode  PetscSharedWorkingDirectory(MPI_Comm,PetscBool  *);
23327087cfbeSBarry Smith extern PetscErrorCode  PetscGetTmp(MPI_Comm,char[],size_t);
23337087cfbeSBarry Smith extern PetscErrorCode  PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
23347087cfbeSBarry Smith extern PetscErrorCode  PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
23357087cfbeSBarry Smith extern PetscErrorCode  PetscOpenSocket(char*,int,int*);
23367087cfbeSBarry Smith extern PetscErrorCode  PetscWebServe(MPI_Comm,int);
2337d382aafbSBarry Smith 
2338d382aafbSBarry Smith /*
2339d382aafbSBarry Smith    In binary files variables are stored using the following lengths,
2340d382aafbSBarry Smith   regardless of how they are stored in memory on any one particular
2341d382aafbSBarry Smith   machine. Use these rather then sizeof() in computing sizes for
2342d382aafbSBarry Smith   PetscBinarySeek().
2343d382aafbSBarry Smith */
2344d382aafbSBarry Smith #define PETSC_BINARY_INT_SIZE   (32/8)
2345d382aafbSBarry Smith #define PETSC_BINARY_FLOAT_SIZE  (32/8)
2346d382aafbSBarry Smith #define PETSC_BINARY_CHAR_SIZE  (8/8)
2347d382aafbSBarry Smith #define PETSC_BINARY_SHORT_SIZE  (16/8)
2348d382aafbSBarry Smith #define PETSC_BINARY_DOUBLE_SIZE  (64/8)
2349d382aafbSBarry Smith #define PETSC_BINARY_SCALAR_SIZE  sizeof(PetscScalar)
2350d382aafbSBarry Smith 
2351d382aafbSBarry Smith /*E
2352d382aafbSBarry Smith   PetscBinarySeekType - argument to PetscBinarySeek()
2353d382aafbSBarry Smith 
2354d382aafbSBarry Smith   Level: advanced
2355d382aafbSBarry Smith 
2356d382aafbSBarry Smith .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2357d382aafbSBarry Smith E*/
2358d382aafbSBarry Smith typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
23597087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
23607087cfbeSBarry Smith extern PetscErrorCode  PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
2361d382aafbSBarry Smith 
23627087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugTerminal(const char[]);
23637087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebugger(const char[],PetscBool );
23647087cfbeSBarry Smith extern PetscErrorCode  PetscSetDefaultDebugger(void);
23657087cfbeSBarry Smith extern PetscErrorCode  PetscSetDebuggerFromString(char*);
23667087cfbeSBarry Smith extern PetscErrorCode  PetscAttachDebugger(void);
23677087cfbeSBarry Smith extern PetscErrorCode  PetscStopForDebugger(void);
2368d382aafbSBarry Smith 
23697087cfbeSBarry Smith extern PetscErrorCode  PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
23707087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
23717087cfbeSBarry Smith extern PetscErrorCode  PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
23727087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
23737087cfbeSBarry Smith extern PetscErrorCode  PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2374d382aafbSBarry Smith 
23757087cfbeSBarry Smith extern PetscErrorCode  PetscSSEIsEnabled(MPI_Comm,PetscBool  *,PetscBool  *);
2376d382aafbSBarry Smith 
2377d382aafbSBarry Smith /*E
2378d382aafbSBarry Smith   InsertMode - Whether entries are inserted or added into vectors or matrices
2379d382aafbSBarry Smith 
2380d382aafbSBarry Smith   Level: beginner
2381d382aafbSBarry Smith 
2382d382aafbSBarry Smith .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2383d382aafbSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2384d382aafbSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2385d382aafbSBarry Smith E*/
238611f088b5SMatthew G Knepley  typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES} InsertMode;
2387d382aafbSBarry Smith 
2388d382aafbSBarry Smith /*MC
2389d382aafbSBarry Smith     INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2390d382aafbSBarry Smith 
2391d382aafbSBarry Smith     Level: beginner
2392d382aafbSBarry Smith 
2393d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2394eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2395eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2396d382aafbSBarry Smith 
2397d382aafbSBarry Smith M*/
2398d382aafbSBarry Smith 
2399d382aafbSBarry Smith /*MC
2400d382aafbSBarry Smith     ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2401d382aafbSBarry Smith                 value into that location
2402d382aafbSBarry Smith 
2403d382aafbSBarry Smith     Level: beginner
2404d382aafbSBarry Smith 
2405d382aafbSBarry Smith .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2406eca87e8dSBarry Smith           VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2407eca87e8dSBarry Smith           MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2408d382aafbSBarry Smith 
2409d382aafbSBarry Smith M*/
2410d382aafbSBarry Smith 
2411d382aafbSBarry Smith /*MC
2412d382aafbSBarry Smith     MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2413d382aafbSBarry Smith 
2414d382aafbSBarry Smith     Level: beginner
2415d382aafbSBarry Smith 
2416d382aafbSBarry Smith .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2417d382aafbSBarry Smith 
2418d382aafbSBarry Smith M*/
2419d382aafbSBarry Smith 
2420d382aafbSBarry Smith /*S
2421d382aafbSBarry Smith    PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT
2422d382aafbSBarry Smith 
2423d382aafbSBarry Smith    Level: advanced
2424d382aafbSBarry Smith 
2425d382aafbSBarry Smith    Concepts: communicator, create
2426d382aafbSBarry Smith S*/
2427d382aafbSBarry Smith typedef struct _n_PetscSubcomm* PetscSubcomm;
2428d382aafbSBarry Smith 
2429d382aafbSBarry Smith struct _n_PetscSubcomm {
2430d382aafbSBarry Smith   MPI_Comm   parent;      /* parent communicator */
2431d382aafbSBarry Smith   MPI_Comm   dupparent;   /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2432d382aafbSBarry Smith   MPI_Comm   comm;        /* this communicator */
2433d382aafbSBarry Smith   PetscInt   n;           /* num of subcommunicators under the parent communicator */
2434d382aafbSBarry Smith   PetscInt   color;       /* color of processors belong to this communicator */
2435d382aafbSBarry Smith };
2436d382aafbSBarry Smith 
2437638faf0bSHong Zhang typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
2438638faf0bSHong Zhang extern const char *PetscSubcommTypes[];
2439638faf0bSHong Zhang 
24407087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2441fcfd50ebSBarry Smith extern PetscErrorCode  PetscSubcommDestroy(PetscSubcomm*);
24427087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetNumber(PetscSubcomm,PetscInt);
24437087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetType(PetscSubcomm,const PetscSubcommType);
24447087cfbeSBarry Smith extern PetscErrorCode  PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt);
2445d382aafbSBarry Smith 
2446d382aafbSBarry Smith PETSC_EXTERN_CXX_END
24476c7e564aSBarry Smith 
24489e03d832SJed Brown /* Reset __FUNCT__ in case the user does not define it themselves */
24499e03d832SJed Brown #undef __FUNCT__
24509e03d832SJed Brown #define __FUNCT__ "User provided function"
24519e03d832SJed Brown 
2452d382aafbSBarry Smith #endif
2453