1 /* 2 This is the main PETSc include file (for C and C++). It is included by all 3 other PETSc include files, so it almost never has to be specifically included. 4 */ 5 #if !defined(__PETSCSYS_H) 6 #define __PETSCSYS_H 7 /* ========================================================================== */ 8 /* 9 petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 10 found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include 11 in the conf/variables definition of PETSC_INCLUDE. For --prefix installs the ${PETSC_ARCH}/ 12 does not exist and petscconf.h is in the same directory as the other PETSc include files. 13 */ 14 #include "petscconf.h" 15 #include "petscfix.h" 16 17 #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 18 /* 19 Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 20 We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 21 */ 22 #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 23 #define _POSIX_C_SOURCE 200112L 24 #endif 25 #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 26 #define _BSD_SOURCE 27 #endif 28 #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 29 #define _GNU_SOURCE 30 #endif 31 #endif 32 33 /* ========================================================================== */ 34 /* 35 This facilitates using the C version of PETSc from C++ and the 36 C++ version from C. Use --with-c-support --with-clanguage=c++ with ./configure for the latter) 37 */ 38 #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_EXTERN_CXX) && !defined(__cplusplus) 39 #error "PETSc configured with --with-clanguage=c++ and NOT --with-c-support - it can be used only with a C++ compiler" 40 #endif 41 42 #if defined(__cplusplus) 43 # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 44 #else 45 # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 46 #endif 47 48 #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 49 # define PETSC_DLLEXPORT __declspec(dllexport) 50 # define PETSC_DLLIMPORT __declspec(dllimport) 51 #elif defined(PETSC_USE_VISIBILITY) 52 # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 53 # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 54 #else 55 # define PETSC_DLLEXPORT 56 # define PETSC_DLLIMPORT 57 #endif 58 59 #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 60 # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 61 #else /* Win32 users need this to import symbols from petsc.dll */ 62 # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 63 #endif 64 65 #if defined(PETSC_USE_EXTERN_CXX) && defined(__cplusplus) 66 #define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 67 #define PETSC_EXTERN_TYPEDEF extern "C" 68 #else 69 #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 70 #define PETSC_EXTERN_TYPEDEF 71 #endif 72 /* ========================================================================== */ 73 /* 74 Current PETSc version number and release date. Also listed in 75 Web page 76 src/docs/tex/manual/intro.tex, 77 src/docs/tex/manual/manual.tex. 78 src/docs/website/index.html. 79 */ 80 #include "petscversion.h" 81 #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n" 82 #if (PETSC_VERSION_RELEASE == 1) 83 #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Release Version %d.%d.%d, Patch %d, %s ", \ 84 PETSC_VERSION_MAJOR,PETSC_VERSION_MINOR, PETSC_VERSION_SUBMINOR, \ 85 PETSC_VERSION_PATCH,PETSC_VERSION_PATCH_DATE) 86 #else 87 #define PetscGetVersion(version,len) PetscSNPrintf(version,len,"Petsc Development HG revision: %s HG Date: %s", \ 88 PETSC_VERSION_HG, PETSC_VERSION_DATE_HG) 89 #endif 90 91 /*MC 92 PetscGetVersion - Gets the PETSc version information in a string. 93 94 Input Parameter: 95 . len - length of the string 96 97 Output Parameter: 98 . version - version string 99 100 Level: developer 101 102 Usage: 103 char version[256]; 104 ierr = PetscGetVersion(version,256);CHKERRQ(ierr) 105 106 Fortran Note: 107 This routine is not supported in Fortran. 108 109 .seealso: PetscGetProgramName() 110 111 M*/ 112 113 /* ========================================================================== */ 114 115 /* 116 Defines the interface to MPI allowing the use of all MPI functions. 117 118 PETSc does not use the C++ binding of MPI at ALL. The following flag 119 makes sure the C++ bindings are not included. The C++ bindings REQUIRE 120 putting mpi.h before ANY C++ include files, we cannot control this 121 with all PETSc users. Users who want to use the MPI C++ bindings can include 122 mpicxx.h directly in their code 123 */ 124 #define MPICH_SKIP_MPICXX 1 125 #define OMPI_SKIP_MPICXX 1 126 #include "mpi.h" 127 128 /* 129 Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 130 see the top of mpicxx.h in the MPICH2 distribution. 131 */ 132 #include <stdio.h> 133 134 /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 135 #if !defined(MPIAPI) 136 #define MPIAPI 137 #endif 138 139 140 /*MC 141 PetscErrorCode - datatype used for return error code from all PETSc functions 142 143 Level: beginner 144 145 .seealso: CHKERRQ, SETERRQ 146 M*/ 147 typedef int PetscErrorCode; 148 149 /*MC 150 151 PetscClassId - A unique id used to identify each PETSc class. 152 (internal integer in the data structure used for error 153 checking). These are all computed by an offset from the lowest 154 one, PETSC_SMALLEST_CLASSID. 155 156 Level: advanced 157 158 .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate() 159 M*/ 160 typedef int PetscClassId; 161 162 163 /*MC 164 PetscMPIInt - datatype used to represent 'int' parameters to MPI functions. 165 166 Level: intermediate 167 168 Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 169 standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 170 171 PetscMPIIntCheck(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it generates a 172 PETSC_ERR_ARG_OUTOFRANGE error. 173 174 PetscMPIInt b = PetscMPIIntCast(a) checks if the given PetscInt a will fit in a PetscMPIInt, if not it 175 generates a PETSC_ERR_ARG_OUTOFRANGE error. 176 177 .seealso: PetscBLASInt, PetscInt 178 179 M*/ 180 typedef int PetscMPIInt; 181 182 /*MC 183 PetscEnum - datatype used to pass enum types within PETSc functions. 184 185 Level: intermediate 186 187 .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum() 188 M*/ 189 typedef enum { ENUM_DUMMY } PetscEnum; 190 191 /*MC 192 PetscInt - PETSc type that represents integer - used primarily to 193 represent size of arrays and indexing into arrays. Its size can be configured with the option 194 --with-64-bit-indices - to be either 32bit or 64bit [default 32 bit ints] 195 196 Level: intermediate 197 198 .seealso: PetscScalar, PetscBLASInt, PetscMPIInt 199 M*/ 200 #if (PETSC_SIZEOF_LONG_LONG == 8) 201 typedef long long Petsc64bitInt; 202 #elif defined(PETSC_HAVE___INT64) 203 typedef __int64 Petsc64bitInt; 204 #else 205 typedef unknown64bit Petsc64bitInt 206 #endif 207 #if defined(PETSC_USE_64BIT_INDICES) 208 typedef Petsc64bitInt PetscInt; 209 #define MPIU_INT MPI_LONG_LONG_INT 210 #else 211 typedef int PetscInt; 212 #define MPIU_INT MPI_INT 213 #endif 214 215 216 /*MC 217 PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions. 218 219 Level: intermediate 220 221 Notes: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but 222 standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit 223 (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below). 224 225 PetscBLASIntCheck(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it generates a 226 PETSC_ERR_ARG_OUTOFRANGE error. 227 228 PetscBLASInt b = PetscBLASIntCast(a) checks if the given PetscInt a will fit in a PetscBLASInt, if not it 229 generates a PETSC_ERR_ARG_OUTOFRANGE error 230 231 Installation Notes: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc, 232 if you run ./configure with the option 233 --with-blas-lapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib] 234 but you need to also use --known-64-bit-blas-indices. 235 236 MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with --known-64-bit-blas-indices 237 238 Developer Notes: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK. 239 240 External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot 241 be used with PETSc if you have set PetscBLASInt to long int. 242 243 .seealso: PetscMPIInt, PetscInt 244 245 M*/ 246 #if defined(PETSC_HAVE_64BIT_BLAS_INDICES) 247 typedef Petsc64bitInt PetscBLASInt; 248 #else 249 typedef int PetscBLASInt; 250 #endif 251 252 /*EC 253 254 PetscPrecision - indicates what precision the object is using. This is currently not used. 255 256 Level: advanced 257 258 .seealso: PetscObjectSetPrecision() 259 E*/ 260 typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision; 261 PETSC_EXTERN const char *PetscPrecisions[]; 262 263 /* 264 For the rare cases when one needs to send a size_t object with MPI 265 */ 266 #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT) 267 #define MPIU_SIZE_T MPI_INT 268 #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG) 269 #define MPIU_SIZE_T MPI_LONG 270 #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG) 271 #define MPIU_SIZE_T MPI_LONG_LONG_INT 272 #else 273 #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov" 274 #endif 275 276 277 /* 278 You can use PETSC_STDOUT as a replacement of stdout. You can also change 279 the value of PETSC_STDOUT to redirect all standard output elsewhere 280 */ 281 PETSC_EXTERN FILE* PETSC_STDOUT; 282 283 /* 284 You can use PETSC_STDERR as a replacement of stderr. You can also change 285 the value of PETSC_STDERR to redirect all standard error elsewhere 286 */ 287 PETSC_EXTERN FILE* PETSC_STDERR; 288 289 /*MC 290 PetscUnlikely - hints the compiler that the given condition is usually FALSE 291 292 Synopsis: 293 PetscBool PetscUnlikely(PetscBool cond) 294 295 Not Collective 296 297 Input Parameters: 298 . cond - condition or expression 299 300 Note: This returns the same truth value, it is only a hint to compilers that the resulting 301 branch is unlikely. 302 303 Level: advanced 304 305 .seealso: PetscLikely(), CHKERRQ 306 M*/ 307 308 /*MC 309 PetscLikely - hints the compiler that the given condition is usually TRUE 310 311 Synopsis: 312 PetscBool PetscUnlikely(PetscBool cond) 313 314 Not Collective 315 316 Input Parameters: 317 . cond - condition or expression 318 319 Note: This returns the same truth value, it is only a hint to compilers that the resulting 320 branch is likely. 321 322 Level: advanced 323 324 .seealso: PetscUnlikely() 325 M*/ 326 #if defined(PETSC_HAVE_BUILTIN_EXPECT) 327 # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 328 # define PetscLikely(cond) __builtin_expect(!!(cond),1) 329 #else 330 # define PetscUnlikely(cond) (cond) 331 # define PetscLikely(cond) (cond) 332 #endif 333 334 /* 335 Defines some elementary mathematics functions and constants. 336 */ 337 #include "petscmath.h" 338 339 /* 340 Declare extern C stuff after including external header files 341 */ 342 343 344 /* 345 Basic PETSc constants 346 */ 347 348 /*E 349 PetscBool - Logical variable. Actually an int in C and a logical in Fortran. 350 351 Level: beginner 352 353 Developer Note: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for 354 boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms. 355 356 E*/ 357 typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool; 358 PETSC_EXTERN const char *const PetscBools[]; 359 360 /*E 361 PetscCopyMode - Determines how an array passed to certain functions is copied or retained 362 363 Level: beginner 364 365 $ PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array 366 $ PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or 367 $ delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran. 368 $ PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use 369 the array but the user must delete the array after the object is destroyed. 370 371 E*/ 372 typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode; 373 PETSC_EXTERN const char *const PetscCopyModes[]; 374 375 /*MC 376 PETSC_FALSE - False value of PetscBool 377 378 Level: beginner 379 380 Note: Zero integer 381 382 .seealso: PetscBool , PETSC_TRUE 383 M*/ 384 385 /*MC 386 PETSC_TRUE - True value of PetscBool 387 388 Level: beginner 389 390 Note: Nonzero integer 391 392 .seealso: PetscBool , PETSC_FALSE 393 M*/ 394 395 /*MC 396 PETSC_NULL - standard way of passing in a null or array or pointer 397 398 Level: beginner 399 400 Notes: accepted by many PETSc functions to not set a parameter and instead use 401 some default 402 403 This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 404 PETSC_NULL_DOUBLE_PRECISION, PETSC_NULL_FUNCTION, PETSC_NULL_OBJECT etc 405 406 Developer Note: Why have PETSC_NULL, why not just use NULL? The problem is that NULL is defined in different include files under 407 different versions of Unix. It is tricky to insure the correct include file is always included. 408 409 .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 410 411 M*/ 412 #define PETSC_NULL 0 413 414 /*MC 415 PETSC_IGNORE - same as PETSC_NULL, means PETSc will ignore this argument 416 417 Level: beginner 418 419 Note: accepted by many PETSc functions to not set a parameter and instead use 420 some default 421 422 Fortran Notes: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 423 PETSC_NULL_DOUBLE_PRECISION etc 424 425 .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_NULL, PETSC_DETERMINE 426 427 M*/ 428 #define PETSC_IGNORE PETSC_NULL 429 430 /*MC 431 PETSC_DECIDE - standard way of passing in integer or floating point parameter 432 where you wish PETSc to use the default. 433 434 Level: beginner 435 436 .seealso: PETSC_NULL, PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 437 438 M*/ 439 #define PETSC_DECIDE -1 440 441 /*MC 442 PETSC_DETERMINE - standard way of passing in integer or floating point parameter 443 where you wish PETSc to compute the required value. 444 445 Level: beginner 446 447 448 Developer Note: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 449 some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 450 451 .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, PETSC_NULL, VecSetSizes() 452 453 M*/ 454 #define PETSC_DETERMINE PETSC_DECIDE 455 456 /*MC 457 PETSC_DEFAULT - standard way of passing in integer or floating point parameter 458 where you wish PETSc to use the default. 459 460 Level: beginner 461 462 Fortran Notes: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_DOUBLE_PRECISION. 463 464 .seealso: PETSC_DECIDE, PETSC_NULL, PETSC_IGNORE, PETSC_DETERMINE 465 466 M*/ 467 #define PETSC_DEFAULT -2 468 469 /*MC 470 PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 471 all the processs that PETSc knows about. 472 473 Level: beginner 474 475 Notes: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 476 run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 477 communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 478 PetscInitialize() 479 480 .seealso: PETSC_COMM_SELF 481 482 M*/ 483 PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 484 485 /*MC 486 PETSC_COMM_SELF - This is always MPI_COMM_SELF 487 488 Level: beginner 489 490 .seealso: PETSC_COMM_WORLD 491 492 M*/ 493 #define PETSC_COMM_SELF MPI_COMM_SELF 494 495 PETSC_EXTERN PetscBool PetscInitializeCalled; 496 PETSC_EXTERN PetscBool PetscFinalizeCalled; 497 PETSC_EXTERN PetscBool PetscCUSPSynchronize; 498 499 PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 500 PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 501 PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 502 503 /*MC 504 PetscMalloc - Allocates memory 505 506 Synopsis: 507 PetscErrorCode PetscMalloc(size_t m,void **result) 508 509 Not Collective 510 511 Input Parameter: 512 . m - number of bytes to allocate 513 514 Output Parameter: 515 . result - memory allocated 516 517 Level: beginner 518 519 Notes: Memory is always allocated at least double aligned 520 521 If you request memory of zero size it will allocate no space and assign the pointer to 0; PetscFree() will 522 properly handle not freeing the null pointer. 523 524 .seealso: PetscFree(), PetscNew() 525 526 Concepts: memory allocation 527 528 M*/ 529 #define PetscMalloc(a,b) ((a != 0) ? (*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__,(void**)(b)) : (*(b) = 0,0) ) 530 531 /*MC 532 PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 533 534 Synopsis: 535 void *PetscAddrAlign(void *addr) 536 537 Not Collective 538 539 Input Parameters: 540 . addr - address to align (any pointer type) 541 542 Level: developer 543 544 .seealso: PetscMallocAlign() 545 546 Concepts: memory allocation 547 M*/ 548 #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 549 550 /*MC 551 PetscMalloc2 - Allocates 2 chunks of memory both aligned to PETSC_MEMALIGN 552 553 Synopsis: 554 PetscErrorCode PetscMalloc2(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2) 555 556 Not Collective 557 558 Input Parameter: 559 + m1 - number of elements to allocate in 1st chunk (may be zero) 560 . t1 - type of first memory elements 561 . m2 - number of elements to allocate in 2nd chunk (may be zero) 562 - t2 - type of second memory elements 563 564 Output Parameter: 565 + r1 - memory allocated in first chunk 566 - r2 - memory allocated in second chunk 567 568 Level: developer 569 570 .seealso: PetscFree(), PetscNew(), PetscMalloc() 571 572 Concepts: memory allocation 573 574 M*/ 575 #if defined(PETSC_USE_DEBUG) 576 #define PetscMalloc2(m1,t1,r1,m2,t2,r2) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2)) 577 #else 578 #define PetscMalloc2(m1,t1,r1,m2,t2,r2) ((*(r2) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(PETSC_MEMALIGN-1),r1)) || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),0)) 579 #endif 580 581 /*MC 582 PetscMalloc3 - Allocates 3 chunks of memory all aligned to PETSC_MEMALIGN 583 584 Synopsis: 585 PetscErrorCode PetscMalloc3(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3) 586 587 Not Collective 588 589 Input Parameter: 590 + m1 - number of elements to allocate in 1st chunk (may be zero) 591 . t1 - type of first memory elements 592 . m2 - number of elements to allocate in 2nd chunk (may be zero) 593 . t2 - type of second memory elements 594 . m3 - number of elements to allocate in 3rd chunk (may be zero) 595 - t3 - type of third memory elements 596 597 Output Parameter: 598 + r1 - memory allocated in first chunk 599 . r2 - memory allocated in second chunk 600 - r3 - memory allocated in third chunk 601 602 Level: developer 603 604 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3() 605 606 Concepts: memory allocation 607 608 M*/ 609 #if defined(PETSC_USE_DEBUG) 610 #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3)) 611 #else 612 #define PetscMalloc3(m1,t1,r1,m2,t2,r2,m3,t3,r3) ((*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+2*(PETSC_MEMALIGN-1),r1)) \ 613 || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),0)) 614 #endif 615 616 /*MC 617 PetscMalloc4 - Allocates 4 chunks of memory all aligned to PETSC_MEMALIGN 618 619 Synopsis: 620 PetscErrorCode PetscMalloc4(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4) 621 622 Not Collective 623 624 Input Parameter: 625 + m1 - number of elements to allocate in 1st chunk (may be zero) 626 . t1 - type of first memory elements 627 . m2 - number of elements to allocate in 2nd chunk (may be zero) 628 . t2 - type of second memory elements 629 . m3 - number of elements to allocate in 3rd chunk (may be zero) 630 . t3 - type of third memory elements 631 . m4 - number of elements to allocate in 4th chunk (may be zero) 632 - t4 - type of fourth memory elements 633 634 Output Parameter: 635 + r1 - memory allocated in first chunk 636 . r2 - memory allocated in second chunk 637 . r3 - memory allocated in third chunk 638 - r4 - memory allocated in fourth chunk 639 640 Level: developer 641 642 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4() 643 644 Concepts: memory allocation 645 646 M*/ 647 #if defined(PETSC_USE_DEBUG) 648 #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4)) 649 #else 650 #define PetscMalloc4(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4) \ 651 ((*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+3*(PETSC_MEMALIGN-1),r1)) \ 652 || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),0)) 653 #endif 654 655 /*MC 656 PetscMalloc5 - Allocates 5 chunks of memory all aligned to PETSC_MEMALIGN 657 658 Synopsis: 659 PetscErrorCode PetscMalloc5(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5) 660 661 Not Collective 662 663 Input Parameter: 664 + m1 - number of elements to allocate in 1st chunk (may be zero) 665 . t1 - type of first memory elements 666 . m2 - number of elements to allocate in 2nd chunk (may be zero) 667 . t2 - type of second memory elements 668 . m3 - number of elements to allocate in 3rd chunk (may be zero) 669 . t3 - type of third memory elements 670 . m4 - number of elements to allocate in 4th chunk (may be zero) 671 . t4 - type of fourth memory elements 672 . m5 - number of elements to allocate in 5th chunk (may be zero) 673 - t5 - type of fifth memory elements 674 675 Output Parameter: 676 + r1 - memory allocated in first chunk 677 . r2 - memory allocated in second chunk 678 . r3 - memory allocated in third chunk 679 . r4 - memory allocated in fourth chunk 680 - r5 - memory allocated in fifth chunk 681 682 Level: developer 683 684 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5() 685 686 Concepts: memory allocation 687 688 M*/ 689 #if defined(PETSC_USE_DEBUG) 690 #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5)) 691 #else 692 #define PetscMalloc5(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5) \ 693 ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+4*(PETSC_MEMALIGN-1),r1)) \ 694 || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),0)) 695 #endif 696 697 698 /*MC 699 PetscMalloc6 - Allocates 6 chunks of memory all aligned to PETSC_MEMALIGN 700 701 Synopsis: 702 PetscErrorCode PetscMalloc6(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6) 703 704 Not Collective 705 706 Input Parameter: 707 + m1 - number of elements to allocate in 1st chunk (may be zero) 708 . t1 - type of first memory elements 709 . m2 - number of elements to allocate in 2nd chunk (may be zero) 710 . t2 - type of second memory elements 711 . m3 - number of elements to allocate in 3rd chunk (may be zero) 712 . t3 - type of third memory elements 713 . m4 - number of elements to allocate in 4th chunk (may be zero) 714 . t4 - type of fourth memory elements 715 . m5 - number of elements to allocate in 5th chunk (may be zero) 716 . t5 - type of fifth memory elements 717 . m6 - number of elements to allocate in 6th chunk (may be zero) 718 - t6 - type of sixth memory elements 719 720 Output Parameter: 721 + r1 - memory allocated in first chunk 722 . r2 - memory allocated in second chunk 723 . r3 - memory allocated in third chunk 724 . r4 - memory allocated in fourth chunk 725 . r5 - memory allocated in fifth chunk 726 - r6 - memory allocated in sixth chunk 727 728 Level: developer 729 730 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 731 732 Concepts: memory allocation 733 734 M*/ 735 #if defined(PETSC_USE_DEBUG) 736 #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6)) 737 #else 738 #define PetscMalloc6(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6) \ 739 ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+5*(PETSC_MEMALIGN-1),r1)) \ 740 || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),0)) 741 #endif 742 743 /*MC 744 PetscMalloc7 - Allocates 7 chunks of memory all aligned to PETSC_MEMALIGN 745 746 Synopsis: 747 PetscErrorCode PetscMalloc7(size_t m1,type, t1,void **r1,size_t m2,type t2,void **r2,size_t m3,type t3,void **r3,size_t m4,type t4,void **r4,size_t m5,type t5,void **r5,size_t m6,type t6,void **r6,size_t m7,type t7,void **r7) 748 749 Not Collective 750 751 Input Parameter: 752 + m1 - number of elements to allocate in 1st chunk (may be zero) 753 . t1 - type of first memory elements 754 . m2 - number of elements to allocate in 2nd chunk (may be zero) 755 . t2 - type of second memory elements 756 . m3 - number of elements to allocate in 3rd chunk (may be zero) 757 . t3 - type of third memory elements 758 . m4 - number of elements to allocate in 4th chunk (may be zero) 759 . t4 - type of fourth memory elements 760 . m5 - number of elements to allocate in 5th chunk (may be zero) 761 . t5 - type of fifth memory elements 762 . m6 - number of elements to allocate in 6th chunk (may be zero) 763 . t6 - type of sixth memory elements 764 . m7 - number of elements to allocate in 7th chunk (may be zero) 765 - t7 - type of sixth memory elements 766 767 Output Parameter: 768 + r1 - memory allocated in first chunk 769 . r2 - memory allocated in second chunk 770 . r3 - memory allocated in third chunk 771 . r4 - memory allocated in fourth chunk 772 . r5 - memory allocated in fifth chunk 773 . r6 - memory allocated in sixth chunk 774 - r7 - memory allocated in seventh chunk 775 776 Level: developer 777 778 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6(), PetscFree7() 779 780 Concepts: memory allocation 781 782 M*/ 783 #if defined(PETSC_USE_DEBUG) 784 #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) (PetscMalloc((m1)*sizeof(t1),r1) || PetscMalloc((m2)*sizeof(t2),r2) || PetscMalloc((m3)*sizeof(t3),r3) || PetscMalloc((m4)*sizeof(t4),r4) || PetscMalloc((m5)*sizeof(t5),r5) || PetscMalloc((m6)*sizeof(t6),r6) || PetscMalloc((m7)*sizeof(t7),r7)) 785 #else 786 #define PetscMalloc7(m1,t1,r1,m2,t2,r2,m3,t3,r3,m4,t4,r4,m5,t5,r5,m6,t6,r6,m7,t7,r7) \ 787 ((*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(t1)+(m2)*sizeof(t2)+(m3)*sizeof(t3)+(m4)*sizeof(t4)+(m5)*sizeof(t5)+(m6)*sizeof(t6)+(m7)*sizeof(t7)+6*(PETSC_MEMALIGN-1),r1)) \ 788 || (*(r2) = (t2*)PetscAddrAlign(*(r1)+m1),*(r3) = (t3*)PetscAddrAlign(*(r2)+m2),*(r4) = (t4*)PetscAddrAlign(*(r3)+m3),*(r5) = (t5*)PetscAddrAlign(*(r4)+m4),*(r6) = (t6*)PetscAddrAlign(*(r5)+m5),*(r7) = (t7*)PetscAddrAlign(*(r6)+m6),0)) 789 #endif 790 791 /*MC 792 PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 793 794 Synopsis: 795 PetscErrorCode PetscNew(struct type,((type *))result) 796 797 Not Collective 798 799 Input Parameter: 800 . type - structure name of space to be allocated. Memory of size sizeof(type) is allocated 801 802 Output Parameter: 803 . result - memory allocated 804 805 Level: beginner 806 807 .seealso: PetscFree(), PetscMalloc(), PetscNewLog() 808 809 Concepts: memory allocation 810 811 M*/ 812 #define PetscNew(A,b) (PetscMalloc(sizeof(A),(b)) || PetscMemzero(*(b),sizeof(A))) 813 814 /*MC 815 PetscNewLog - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 816 with the given object using PetscLogObjectMemory(). 817 818 Synopsis: 819 PetscErrorCode PetscNewLog(PetscObject obj,struct type,((type *))result) 820 821 Not Collective 822 823 Input Parameter: 824 + obj - object memory is logged to 825 - type - structure name of space to be allocated. Memory of size sizeof(type) is allocated 826 827 Output Parameter: 828 . result - memory allocated 829 830 Level: developer 831 832 .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory() 833 834 Concepts: memory allocation 835 836 M*/ 837 #define PetscNewLog(o,A,b) (PetscNew(A,b) || ((o) ? PetscLogObjectMemory(o,sizeof(A)) : 0)) 838 839 /*MC 840 PetscFree - Frees memory 841 842 Synopsis: 843 PetscErrorCode PetscFree(void *memory) 844 845 Not Collective 846 847 Input Parameter: 848 . memory - memory to free (the pointer is ALWAYS set to 0 upon sucess) 849 850 Level: beginner 851 852 Notes: Memory must have been obtained with PetscNew() or PetscMalloc() 853 854 .seealso: PetscNew(), PetscMalloc(), PetscFreeVoid() 855 856 Concepts: memory allocation 857 858 M*/ 859 #define PetscFree(a) ((a) && ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__) || ((a) = 0,0))) 860 861 /*MC 862 PetscFreeVoid - Frees memory 863 864 Synopsis: 865 void PetscFreeVoid(void *memory) 866 867 Not Collective 868 869 Input Parameter: 870 . memory - memory to free 871 872 Level: beginner 873 874 Notes: This is different from PetscFree() in that no error code is returned 875 876 .seealso: PetscFree(), PetscNew(), PetscMalloc() 877 878 Concepts: memory allocation 879 880 M*/ 881 #define PetscFreeVoid(a) ((*PetscTrFree)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,__SDIR__),(a) = 0) 882 883 884 /*MC 885 PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 886 887 Synopsis: 888 PetscErrorCode PetscFree2(void *memory1,void *memory2) 889 890 Not Collective 891 892 Input Parameter: 893 + memory1 - memory to free 894 - memory2 - 2nd memory to free 895 896 Level: developer 897 898 Notes: Memory must have been obtained with PetscMalloc2() 899 900 .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 901 902 Concepts: memory allocation 903 904 M*/ 905 #if defined(PETSC_USE_DEBUG) 906 #define PetscFree2(m1,m2) (PetscFree(m2) || PetscFree(m1)) 907 #else 908 #define PetscFree2(m1,m2) ((m2)=0, PetscFree(m1)) 909 #endif 910 911 /*MC 912 PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 913 914 Synopsis: 915 PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 916 917 Not Collective 918 919 Input Parameter: 920 + memory1 - memory to free 921 . memory2 - 2nd memory to free 922 - memory3 - 3rd memory to free 923 924 Level: developer 925 926 Notes: Memory must have been obtained with PetscMalloc3() 927 928 .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 929 930 Concepts: memory allocation 931 932 M*/ 933 #if defined(PETSC_USE_DEBUG) 934 #define PetscFree3(m1,m2,m3) (PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 935 #else 936 #define PetscFree3(m1,m2,m3) ((m3)=0,(m2)=0,PetscFree(m1)) 937 #endif 938 939 /*MC 940 PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 941 942 Synopsis: 943 PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 944 945 Not Collective 946 947 Input Parameter: 948 + m1 - memory to free 949 . m2 - 2nd memory to free 950 . m3 - 3rd memory to free 951 - m4 - 4th memory to free 952 953 Level: developer 954 955 Notes: Memory must have been obtained with PetscMalloc4() 956 957 .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 958 959 Concepts: memory allocation 960 961 M*/ 962 #if defined(PETSC_USE_DEBUG) 963 #define PetscFree4(m1,m2,m3,m4) (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 964 #else 965 #define PetscFree4(m1,m2,m3,m4) ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 966 #endif 967 968 /*MC 969 PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 970 971 Synopsis: 972 PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 973 974 Not Collective 975 976 Input Parameter: 977 + m1 - memory to free 978 . m2 - 2nd memory to free 979 . m3 - 3rd memory to free 980 . m4 - 4th memory to free 981 - m5 - 5th memory to free 982 983 Level: developer 984 985 Notes: Memory must have been obtained with PetscMalloc5() 986 987 .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 988 989 Concepts: memory allocation 990 991 M*/ 992 #if defined(PETSC_USE_DEBUG) 993 #define PetscFree5(m1,m2,m3,m4,m5) (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 994 #else 995 #define PetscFree5(m1,m2,m3,m4,m5) ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 996 #endif 997 998 999 /*MC 1000 PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1001 1002 Synopsis: 1003 PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1004 1005 Not Collective 1006 1007 Input Parameter: 1008 + m1 - memory to free 1009 . m2 - 2nd memory to free 1010 . m3 - 3rd memory to free 1011 . m4 - 4th memory to free 1012 . m5 - 5th memory to free 1013 - m6 - 6th memory to free 1014 1015 1016 Level: developer 1017 1018 Notes: Memory must have been obtained with PetscMalloc6() 1019 1020 .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1021 1022 Concepts: memory allocation 1023 1024 M*/ 1025 #if defined(PETSC_USE_DEBUG) 1026 #define PetscFree6(m1,m2,m3,m4,m5,m6) (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1027 #else 1028 #define PetscFree6(m1,m2,m3,m4,m5,m6) ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1029 #endif 1030 1031 /*MC 1032 PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1033 1034 Synopsis: 1035 PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1036 1037 Not Collective 1038 1039 Input Parameter: 1040 + m1 - memory to free 1041 . m2 - 2nd memory to free 1042 . m3 - 3rd memory to free 1043 . m4 - 4th memory to free 1044 . m5 - 5th memory to free 1045 . m6 - 6th memory to free 1046 - m7 - 7th memory to free 1047 1048 1049 Level: developer 1050 1051 Notes: Memory must have been obtained with PetscMalloc7() 1052 1053 .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1054 PetscMalloc7() 1055 1056 Concepts: memory allocation 1057 1058 M*/ 1059 #if defined(PETSC_USE_DEBUG) 1060 #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1)) 1061 #else 1062 #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) 1063 #endif 1064 1065 PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**); 1066 PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]); 1067 PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[],const char[])); 1068 PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1069 1070 /* 1071 PetscLogDouble variables are used to contain double precision numbers 1072 that are not used in the numerical computations, but rather in logging, 1073 timing etc. 1074 */ 1075 typedef double PetscLogDouble; 1076 #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 1077 1078 /* 1079 Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1080 */ 1081 PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 1082 PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *); 1083 PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1084 PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1085 PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool); 1086 PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[],const char[]); 1087 PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void); 1088 PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*); 1089 1090 /*E 1091 PetscDataType - Used for handling different basic data types. 1092 1093 Level: beginner 1094 1095 Developer comment: It would be nice if we could always just use MPI Datatypes, why can we not? 1096 1097 .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(), 1098 PetscDataTypeGetSize() 1099 1100 E*/ 1101 typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5, 1102 PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11} PetscDataType; 1103 PETSC_EXTERN const char *const PetscDataTypes[]; 1104 1105 #if defined(PETSC_USE_COMPLEX) 1106 #define PETSC_SCALAR PETSC_COMPLEX 1107 #else 1108 #if defined(PETSC_USE_REAL_SINGLE) 1109 #define PETSC_SCALAR PETSC_FLOAT 1110 #elif defined(PETSC_USE_REAL___FLOAT128) 1111 #define PETSC_SCALAR PETSC___FLOAT128 1112 #else 1113 #define PETSC_SCALAR PETSC_DOUBLE 1114 #endif 1115 #endif 1116 #if defined(PETSC_USE_REAL_SINGLE) 1117 #define PETSC_REAL PETSC_FLOAT 1118 #elif defined(PETSC_USE_REAL___FLOAT128) 1119 #define PETSC_REAL PETSC___FLOAT128 1120 #else 1121 #define PETSC_REAL PETSC_DOUBLE 1122 #endif 1123 #define PETSC_FORTRANADDR PETSC_LONG 1124 1125 PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1126 PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1127 PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 1128 1129 /* 1130 Basic memory and string operations. These are usually simple wrappers 1131 around the basic Unix system calls, but a few of them have additional 1132 functionality and/or error checking. 1133 */ 1134 PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1135 PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t); 1136 PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1137 PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1138 PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],int*,char ***); 1139 PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1140 PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1141 PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1142 PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1143 PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1144 PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1145 PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1146 PETSC_EXTERN PetscErrorCode PetscStrncat(char[],const char[],size_t); 1147 PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1148 PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1149 PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 1150 PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1151 PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1152 PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1153 PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 1154 PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1155 PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 1156 PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 1157 PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 1158 PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1159 1160 /*S 1161 PetscToken - 'Token' used for managing tokenizing strings 1162 1163 Level: intermediate 1164 1165 .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy() 1166 S*/ 1167 typedef struct _p_PetscToken* PetscToken; 1168 1169 PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1170 PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1171 PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1172 1173 /* 1174 These are MPI operations for MPI_Allreduce() etc 1175 */ 1176 PETSC_EXTERN MPI_Op PetscMaxSum_Op; 1177 #if (defined(PETSC_USE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) 1178 PETSC_EXTERN MPI_Op MPIU_SUM; 1179 #else 1180 #define MPIU_SUM MPI_SUM 1181 #endif 1182 #if defined(PETSC_USE_REAL___FLOAT128) 1183 PETSC_EXTERN MPI_Op MPIU_MAX; 1184 PETSC_EXTERN MPI_Op MPIU_MIN; 1185 #else 1186 #define MPIU_MAX MPI_MAX 1187 #define MPIU_MIN MPI_MIN 1188 #endif 1189 PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1190 1191 PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1192 PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1193 1194 /*S 1195 PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc 1196 1197 Level: beginner 1198 1199 Note: This is the base class from which all PETSc objects are derived from. 1200 1201 .seealso: PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereferenc() 1202 S*/ 1203 typedef struct _p_PetscObject* PetscObject; 1204 1205 /*S 1206 PetscFList - Linked list of functions, possibly stored in dynamic libraries, accessed 1207 by string name 1208 1209 Level: advanced 1210 1211 .seealso: PetscFListAdd(), PetscFListDestroy(), PetscOpFlist 1212 S*/ 1213 typedef struct _n_PetscFList *PetscFList; 1214 1215 /*S 1216 PetscOpFList - Linked list of operations on objects, implemented by functions, possibly stored in dynamic libraries, 1217 accessed by string op name together with string argument types. 1218 1219 Level: advanced 1220 1221 .seealso: PetscFList, PetscOpFListAdd(), PetscOpFListFind(), PetscOpFListDestroy() 1222 S*/ 1223 typedef struct _n_PetscOpFList *PetscOpFList; 1224 1225 /*E 1226 PetscFileMode - Access mode for a file. 1227 1228 Level: beginner 1229 1230 FILE_MODE_READ - open a file at its beginning for reading 1231 1232 FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist) 1233 1234 FILE_MODE_APPEND - open a file at end for writing 1235 1236 FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing 1237 1238 FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end 1239 1240 .seealso: PetscViewerFileSetMode() 1241 E*/ 1242 typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode; 1243 1244 #include "petscviewer.h" 1245 #include "petscoptions.h" 1246 1247 #define PETSC_SMALLEST_CLASSID 1211211 1248 PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1249 PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1250 PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 1251 1252 /* 1253 Routines that get memory usage information from the OS 1254 */ 1255 PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1256 PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1257 PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1258 PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1259 1260 PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []); 1261 PETSC_EXTERN PetscErrorCode PetscGetTime(PetscLogDouble*); 1262 PETSC_EXTERN PetscErrorCode PetscGetCPUTime(PetscLogDouble*); 1263 PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1264 1265 /* 1266 Initialization of PETSc 1267 */ 1268 PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1269 PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1270 PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1271 PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1272 PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1273 PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1274 PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1275 PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1276 PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1277 PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1278 1279 PETSC_EXTERN PetscErrorCode PetscEnd(void); 1280 PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(const char[]); 1281 1282 PETSC_EXTERN MPI_Comm PETSC_COMM_LOCAL_WORLD; 1283 PETSC_EXTERN PetscErrorCode PetscHMPIMerge(PetscMPIInt,PetscErrorCode (*)(void*),void*); 1284 PETSC_EXTERN PetscErrorCode PetscHMPISpawn(PetscMPIInt); 1285 PETSC_EXTERN PetscErrorCode PetscHMPIFinalize(void); 1286 PETSC_EXTERN PetscErrorCode PetscHMPIRun(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void *),void*); 1287 PETSC_EXTERN PetscErrorCode PetscHMPIRunCtx(MPI_Comm,PetscErrorCode (*)(MPI_Comm,void*,void *),void*); 1288 PETSC_EXTERN PetscErrorCode PetscHMPIFree(MPI_Comm,void*); 1289 PETSC_EXTERN PetscErrorCode PetscHMPIMalloc(MPI_Comm,size_t,void**); 1290 1291 PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1292 PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1293 PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1294 PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1295 1296 /* 1297 These are so that in extern C code we can caste function pointers to non-extern C 1298 function pointers. Since the regular C++ code expects its function pointers to be C++ 1299 */ 1300 PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1301 PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1302 PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1303 1304 /* 1305 PetscTryMethod - Queries an object for a method, if it exists then calls it. 1306 These are intended to be used only inside PETSc functions. 1307 1308 Level: developer 1309 1310 .seealso: PetscUseMethod() 1311 */ 1312 #define PetscTryMethod(obj,A,B,C) \ 1313 0;{ PetscErrorCode (*f)B, __ierr; \ 1314 __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1315 if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1316 } 1317 1318 /* 1319 PetscUseMethod - Queries an object for a method, if it exists then calls it, otherwise generates an error. 1320 These are intended to be used only inside PETSc functions. 1321 1322 Level: developer 1323 1324 .seealso: PetscTryMethod() 1325 */ 1326 #define PetscUseMethod(obj,A,B,C) \ 1327 0;{ PetscErrorCode (*f)B, __ierr; \ 1328 __ierr = PetscObjectQueryFunction((PetscObject)obj,A,(PetscVoidStarFunction)&f);CHKERRQ(__ierr); \ 1329 if (f) {__ierr = (*f)C;CHKERRQ(__ierr);}\ 1330 else SETERRQ1(((PetscObject)obj)->comm,PETSC_ERR_SUP,"Cannot locate function %s in object",A); \ 1331 } 1332 1333 /* 1334 Functions that can act on any PETSc object. 1335 */ 1336 PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1337 PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1338 PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1339 PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1340 PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1341 PETSC_EXTERN PetscErrorCode PetscObjectSetPrecision(PetscObject,PetscPrecision); 1342 PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1343 PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1344 PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1345 PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer,const char[]); 1346 PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1347 PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1348 PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1349 PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1350 PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1351 PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1352 PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 1353 PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 1354 PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1355 PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1356 PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *); 1357 PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction(PetscObject,const char[],const char[],void (*)(void)); 1358 PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1359 PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 1360 PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 1361 PETSC_EXTERN PetscErrorCode PetscObjectAddOptionsHandler(PetscObject,PetscErrorCode (*)(PetscObject,void*),PetscErrorCode (*)(PetscObject,void*),void*); 1362 PETSC_EXTERN PetscErrorCode PetscObjectProcessOptionsHandlers(PetscObject); 1363 PETSC_EXTERN PetscErrorCode PetscObjectDestroyOptionsHandlers(PetscObject); 1364 PETSC_EXTERN PetscErrorCode PetscObjectsGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 1365 1366 /*MC 1367 PetscObjectComposeFunctionDynamic - Associates a function with a given PETSc object. 1368 1369 Synopsis: 1370 PetscErrorCode PetscObjectComposeFunctionDynamic(PetscObject obj,const char name[],const char fname[],void *ptr) 1371 1372 Logically Collective on PetscObject 1373 1374 Input Parameters: 1375 + obj - the PETSc object; this must be cast with a (PetscObject), for example, 1376 PetscObjectCompose((PetscObject)mat,...); 1377 . name - name associated with the child function 1378 . fname - name of the function 1379 - ptr - function pointer (or PETSC_NULL if using dynamic libraries) 1380 1381 Level: advanced 1382 1383 1384 Notes: 1385 To remove a registered routine, pass in a PETSC_NULL rname and fnc(). 1386 1387 PetscObjectComposeFunctionDynamic() can be used with any PETSc object (such as 1388 Mat, Vec, KSP, SNES, etc.) or any user-provided object. 1389 1390 The composed function must be wrapped in a EXTERN_C_BEGIN/END for this to 1391 work in C++/complex with dynamic link libraries (./configure options --with-shared-libraries --with-dynamic-loading) 1392 enabled. 1393 1394 Concepts: objects^composing functions 1395 Concepts: composing functions 1396 Concepts: functions^querying 1397 Concepts: objects^querying 1398 Concepts: querying objects 1399 1400 .seealso: PetscObjectQueryFunction() 1401 M*/ 1402 #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1403 #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,0) 1404 #else 1405 #define PetscObjectComposeFunctionDynamic(a,b,c,d) PetscObjectComposeFunction(a,b,c,(PetscVoidFunction)(d)) 1406 #endif 1407 1408 PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction(PetscObject,const char[],void (**)(void)); 1409 PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1410 PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1411 PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1412 PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1413 PETSC_EXTERN PetscErrorCode PetscObjectAMSPublish(PetscObject); 1414 PETSC_EXTERN PetscErrorCode PetscObjectUnPublish(PetscObject); 1415 PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1416 PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1417 PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1418 PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1419 PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 1420 PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1421 PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1422 PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1423 1424 /* 1425 Defines PETSc error handling. 1426 */ 1427 #include "petscerror.h" 1428 1429 /*S 1430 PetscOList - Linked list of PETSc objects, each accessable by string name 1431 1432 Level: developer 1433 1434 Notes: Used by PetscObjectCompose() and PetscObjectQuery() 1435 1436 .seealso: PetscOListAdd(), PetscOListDestroy(), PetscOListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFList 1437 S*/ 1438 typedef struct _n_PetscOList *PetscOList; 1439 1440 PETSC_EXTERN PetscErrorCode PetscOListDestroy(PetscOList*); 1441 PETSC_EXTERN PetscErrorCode PetscOListFind(PetscOList,const char[],PetscObject*); 1442 PETSC_EXTERN PetscErrorCode PetscOListReverseFind(PetscOList,PetscObject,char**,PetscBool*); 1443 PETSC_EXTERN PetscErrorCode PetscOListAdd(PetscOList *,const char[],PetscObject); 1444 PETSC_EXTERN PetscErrorCode PetscOListRemoveReference(PetscOList *,const char[]); 1445 PETSC_EXTERN PetscErrorCode PetscOListDuplicate(PetscOList,PetscOList *); 1446 1447 /* 1448 Dynamic library lists. Lists of names of routines in objects or in dynamic 1449 link libraries that will be loaded as needed. 1450 */ 1451 PETSC_EXTERN PetscErrorCode PetscFListAdd(PetscFList*,const char[],const char[],void (*)(void)); 1452 PETSC_EXTERN PetscErrorCode PetscFListDestroy(PetscFList*); 1453 PETSC_EXTERN PetscErrorCode PetscFListFind(PetscFList,MPI_Comm,const char[],PetscBool,void (**)(void)); 1454 PETSC_EXTERN PetscErrorCode PetscFListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFList,const char[]); 1455 #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 1456 #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,0) 1457 #else 1458 #define PetscFListAddDynamic(a,b,p,c) PetscFListAdd(a,b,p,(void (*)(void))c) 1459 #endif 1460 PETSC_EXTERN PetscErrorCode PetscFListDuplicate(PetscFList,PetscFList *); 1461 PETSC_EXTERN PetscErrorCode PetscFListView(PetscFList,PetscViewer); 1462 PETSC_EXTERN PetscErrorCode PetscFListConcat(const char [],const char [],char []); 1463 PETSC_EXTERN PetscErrorCode PetscFListGet(PetscFList,char ***,int*); 1464 1465 /* 1466 Multiple dispatch operation function lists. Lists of names of routines with corresponding 1467 argument type names with function pointers or in dynamic link libraries that will be loaded 1468 as needed. Search on the op name and argument type names. 1469 */ 1470 PETSC_EXTERN PetscErrorCode PetscOpFListAdd(MPI_Comm, PetscOpFList*,const char[],PetscVoidFunction, const char[], PetscInt, char*[]); 1471 PETSC_EXTERN PetscErrorCode PetscOpFListDestroy(PetscOpFList*); 1472 PETSC_EXTERN PetscErrorCode PetscOpFListFind(MPI_Comm, PetscOpFList, PetscVoidFunction*, const char[], PetscInt, char*[]); 1473 PETSC_EXTERN PetscErrorCode PetscOpFListView(PetscOpFList,PetscViewer); 1474 1475 /*S 1476 PetscDLLibrary - Linked list of dynamics libraries to search for functions 1477 1478 Level: advanced 1479 1480 --with-shared-libraries --with-dynamic-loading must be used with ./configure to use dynamic libraries 1481 1482 .seealso: PetscDLLibraryOpen() 1483 S*/ 1484 typedef struct _n_PetscDLLibrary *PetscDLLibrary; 1485 PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1486 PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1487 PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1488 PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1489 PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1490 PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1491 PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1492 PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1493 1494 /* 1495 PetscShell support. Needs to be better documented. 1496 Logically it is an extension of PetscDLLXXX, PetscObjectCompose, etc. 1497 */ 1498 #include "petscshell.h" 1499 1500 /* 1501 Useful utility routines 1502 */ 1503 PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1504 PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1505 PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1506 PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1507 PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1508 PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1509 1510 /* 1511 PetscNot - negates a logical type value and returns result as a PetscBool 1512 1513 Notes: This is useful in cases like 1514 $ int *a; 1515 $ PetscBool flag = PetscNot(a) 1516 where !a does not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 1517 */ 1518 #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1519 1520 /* 1521 Defines basic graphics available from PETSc. 1522 */ 1523 #include "petscdraw.h" 1524 1525 #if defined(PETSC_HAVE_VALGRIND) 1526 # include <valgrind/valgrind.h> 1527 # define PETSC_RUNNING_ON_VALGRIND RUNNING_ON_VALGRIND 1528 #else 1529 # define PETSC_RUNNING_ON_VALGRIND PETSC_FALSE 1530 #endif 1531 1532 /* 1533 Defines the base data structures for all PETSc objects 1534 */ 1535 #include "petsc-private/petscimpl.h" 1536 1537 1538 /*MC 1539 PetscErrorPrintf - Prints error messages. 1540 1541 Synopsis: 1542 PetscErrorCode (*PetscErrorPrintf)(const char format[],...); 1543 1544 Not Collective 1545 1546 Input Parameters: 1547 . format - the usual printf() format string 1548 1549 Options Database Keys: 1550 + -error_output_stdout - cause error messages to be printed to stdout instead of the 1551 (default) stderr 1552 - -error_output_none to turn off all printing of error messages (does not change the way the 1553 error is handled.) 1554 1555 Notes: Use 1556 $ PetscErrorPrintf = PetscErrorPrintfNone; to turn off all printing of error messages (does not change the way the 1557 $ error is handled.) and 1558 $ PetscErrorPrintf = PetscErrorPrintfDefault; to turn it back on 1559 $ of you can use your own function 1560 1561 Use 1562 PETSC_STDERR = FILE* obtained from a file open etc. to have stderr printed to the file. 1563 PETSC_STDOUT = FILE* obtained from a file open etc. to have stdout printed to the file. 1564 1565 Use 1566 PetscPushErrorHandler() to provide your own error handler that determines what kind of messages to print 1567 1568 Level: developer 1569 1570 Fortran Note: 1571 This routine is not supported in Fortran. 1572 1573 Concepts: error messages^printing 1574 Concepts: printing^error messages 1575 1576 .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscHelpPrintf(), PetscPrintf(), PetscErrorHandlerPush(), PetscVFPrintf(), PetscHelpPrintf() 1577 M*/ 1578 PETSC_EXTERN PetscErrorCode (*PetscErrorPrintf)(const char[],...); 1579 1580 /*MC 1581 PetscHelpPrintf - Prints help messages. 1582 1583 Synopsis: 1584 PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1585 1586 Not Collective 1587 1588 Input Parameters: 1589 . format - the usual printf() format string 1590 1591 Level: developer 1592 1593 Fortran Note: 1594 This routine is not supported in Fortran. 1595 1596 Concepts: help messages^printing 1597 Concepts: printing^help messages 1598 1599 .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1600 M*/ 1601 PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1602 1603 /* 1604 Defines PETSc profiling. 1605 */ 1606 #include "petsclog.h" 1607 1608 /* 1609 For locking, unlocking and destroying AMS memories associated with PETSc objects. ams.h is included in petscviewer.h 1610 */ 1611 #if defined(PETSC_HAVE_AMS) 1612 PETSC_EXTERN PetscBool PetscAMSPublishAll; 1613 #define PetscObjectTakeAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_take_access(((PetscObject)(obj))->amem)) 1614 #define PetscObjectGrantAccess(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_grant_access(((PetscObject)(obj))->amem)) 1615 #define PetscObjectDepublish(obj) ((((PetscObject)(obj))->amem == -1) ? 0 : AMS_Memory_destroy(((PetscObject)(obj))->amem));((PetscObject)(obj))->amem = -1; 1616 #else 1617 #define PetscObjectTakeAccess(obj) 0 1618 #define PetscObjectGrantAccess(obj) 0 1619 #define PetscObjectDepublish(obj) 0 1620 #endif 1621 1622 /* 1623 Simple PETSc parallel IO for ASCII printing 1624 */ 1625 PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1626 PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1627 PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1628 PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1629 PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1630 PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1631 PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 1632 1633 /* These are used internally by PETSc ASCII IO routines*/ 1634 #include <stdarg.h> 1635 PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 1636 PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 1637 PETSC_EXTERN PetscErrorCode PetscVFPrintfDefault(FILE*,const char[],va_list); 1638 1639 #if defined(PETSC_HAVE_MATLAB_ENGINE) 1640 PETSC_EXTERN PetscErrorCode PetscVFPrintf_Matlab(FILE*,const char[],va_list); 1641 #endif 1642 1643 PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1644 PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1645 PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1646 1647 #if defined(PETSC_HAVE_POPEN) 1648 PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1649 PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*,PetscInt*); 1650 #endif 1651 1652 PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1653 PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 1654 PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm); 1655 PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1656 PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1657 PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1658 PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1659 1660 PETSC_EXTERN PetscErrorCode PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*); 1661 1662 /*S 1663 PetscContainer - Simple PETSc object that contains a pointer to any required data 1664 1665 Level: advanced 1666 1667 .seealso: PetscObject, PetscContainerCreate() 1668 S*/ 1669 PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1670 typedef struct _p_PetscContainer* PetscContainer; 1671 PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **); 1672 PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *); 1673 PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1674 PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *); 1675 PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1676 1677 /* 1678 For use in debuggers 1679 */ 1680 PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1681 PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1682 PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1683 PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1684 PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1685 1686 #if defined(PETSC_HAVE_MEMORY_H) 1687 #include <memory.h> 1688 #endif 1689 #if defined(PETSC_HAVE_STDLIB_H) 1690 #include <stdlib.h> 1691 #endif 1692 #if defined(PETSC_HAVE_STRINGS_H) 1693 #include <strings.h> 1694 #endif 1695 #if defined(PETSC_HAVE_STRING_H) 1696 #include <string.h> 1697 #endif 1698 1699 #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1700 #include <xmmintrin.h> 1701 #endif 1702 #if defined(PETSC_HAVE_STDINT_H) 1703 #include <stdint.h> 1704 #endif 1705 1706 #undef __FUNCT__ 1707 #define __FUNCT__ "PetscMemcpy" 1708 /*@C 1709 PetscMemcpy - Copies n bytes, beginning at location b, to the space 1710 beginning at location a. The two memory regions CANNOT overlap, use 1711 PetscMemmove() in that case. 1712 1713 Not Collective 1714 1715 Input Parameters: 1716 + b - pointer to initial memory space 1717 - n - length (in bytes) of space to copy 1718 1719 Output Parameter: 1720 . a - pointer to copy space 1721 1722 Level: intermediate 1723 1724 Compile Option: 1725 PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1726 for memory copies on double precision values. 1727 PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1728 for memory copies on double precision values. 1729 PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1730 for memory copies on double precision values. 1731 1732 Note: 1733 This routine is analogous to memcpy(). 1734 1735 Developer Note: this is inlined for fastest performance 1736 1737 Concepts: memory^copying 1738 Concepts: copying^memory 1739 1740 .seealso: PetscMemmove() 1741 1742 @*/ 1743 PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1744 { 1745 #if defined(PETSC_USE_DEBUG) 1746 unsigned long al = (unsigned long) a,bl = (unsigned long) b; 1747 unsigned long nl = (unsigned long) n; 1748 PetscFunctionBegin; 1749 if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1750 if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1751 #else 1752 PetscFunctionBegin; 1753 #endif 1754 if (a != b) { 1755 #if defined(PETSC_USE_DEBUG) 1756 if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1757 or make sure your copy regions and lengths are correct. \n\ 1758 Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1759 #endif 1760 #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1761 if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1762 size_t len = n/sizeof(PetscScalar); 1763 #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1764 PetscBLASInt one = 1,blen = PetscBLASIntCast(len); 1765 BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one); 1766 #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1767 fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1768 #else 1769 size_t i; 1770 PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1771 for (i=0; i<len; i++) y[i] = x[i]; 1772 #endif 1773 } else { 1774 memcpy((char*)(a),(char*)(b),n); 1775 } 1776 #else 1777 memcpy((char*)(a),(char*)(b),n); 1778 #endif 1779 } 1780 PetscFunctionReturn(0); 1781 } 1782 1783 /*@C 1784 PetscMemzero - Zeros the specified memory. 1785 1786 Not Collective 1787 1788 Input Parameters: 1789 + a - pointer to beginning memory location 1790 - n - length (in bytes) of memory to initialize 1791 1792 Level: intermediate 1793 1794 Compile Option: 1795 PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1796 to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1797 1798 Developer Note: this is inlined for fastest performance 1799 1800 Concepts: memory^zeroing 1801 Concepts: zeroing^memory 1802 1803 .seealso: PetscMemcpy() 1804 @*/ 1805 PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1806 { 1807 if (n > 0) { 1808 #if defined(PETSC_USE_DEBUG) 1809 if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1810 #endif 1811 #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1812 if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1813 size_t i,len = n/sizeof(PetscScalar); 1814 PetscScalar *x = (PetscScalar*)a; 1815 for (i=0; i<len; i++) x[i] = 0.0; 1816 } else { 1817 #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1818 if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1819 PetscInt len = n/sizeof(PetscScalar); 1820 fortranzero_(&len,(PetscScalar*)a); 1821 } else { 1822 #endif 1823 #if defined(PETSC_PREFER_BZERO) 1824 bzero((char *)a,n); 1825 #else 1826 memset((char*)a,0,n); 1827 #endif 1828 #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1829 } 1830 #endif 1831 } 1832 return 0; 1833 } 1834 1835 /*MC 1836 PetscPrefetchBlock - Prefetches a block of memory 1837 1838 Synopsis: 1839 void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1840 1841 Not Collective 1842 1843 Input Parameters: 1844 + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1845 . n - number of elements to fetch 1846 . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 1847 - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1848 1849 Level: developer 1850 1851 Notes: 1852 The last two arguments (rw and t) must be compile-time constants. 1853 1854 Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 1855 equivalent locality hints, but the following macros are always defined to their closest analogue. 1856 + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 1857 . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 1858 . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 1859 - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1860 1861 This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1862 address). 1863 1864 Concepts: memory 1865 M*/ 1866 #define PetscPrefetchBlock(a,n,rw,t) do { \ 1867 const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1868 for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1869 } while (0) 1870 1871 /* 1872 Allows accessing MATLAB Engine 1873 */ 1874 #include "petscmatlab.h" 1875 1876 /* 1877 Determine if some of the kernel computation routines use 1878 Fortran (rather than C) for the numerical calculations. On some machines 1879 and compilers (like complex numbers) the Fortran version of the routines 1880 is faster than the C/C++ versions. The flag --with-fortran-kernels 1881 should be used with ./configure to turn these on. 1882 */ 1883 #if defined(PETSC_USE_FORTRAN_KERNELS) 1884 1885 #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1886 #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1887 #endif 1888 1889 #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 1890 #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1891 #endif 1892 1893 #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1894 #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1895 #endif 1896 1897 #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1898 #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1899 #endif 1900 1901 #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1902 #define PETSC_USE_FORTRAN_KERNEL_NORM 1903 #endif 1904 1905 #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1906 #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1907 #endif 1908 1909 #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1910 #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1911 #endif 1912 1913 #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1914 #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1915 #endif 1916 1917 #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1918 #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1919 #endif 1920 1921 #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1922 #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1923 #endif 1924 1925 #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1926 #define PETSC_USE_FORTRAN_KERNEL_MDOT 1927 #endif 1928 1929 #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1930 #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1931 #endif 1932 1933 #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1934 #define PETSC_USE_FORTRAN_KERNEL_AYPX 1935 #endif 1936 1937 #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1938 #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1939 #endif 1940 1941 #endif 1942 1943 /* 1944 Macros for indicating code that should be compiled with a C interface, 1945 rather than a C++ interface. Any routines that are dynamically loaded 1946 (such as the PCCreate_XXX() routines) must be wrapped so that the name 1947 mangler does not change the functions symbol name. This just hides the 1948 ugly extern "C" {} wrappers. 1949 */ 1950 #if defined(__cplusplus) 1951 #define PETSC_EXTERN_C extern "C" PETSC_VISIBILITY_PUBLIC 1952 #define EXTERN_C_BEGIN extern "C" { 1953 #define EXTERN_C_END } 1954 #else 1955 #define PETSC_EXTERN_C PETSC_EXTERN 1956 #define EXTERN_C_BEGIN 1957 #define EXTERN_C_END 1958 #endif 1959 1960 /* --------------------------------------------------------------------*/ 1961 1962 /*MC 1963 MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1964 communication 1965 1966 Level: beginner 1967 1968 Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1969 1970 .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 1971 M*/ 1972 1973 /*MC 1974 PetscScalar - PETSc type that represents either a double precision real number, a double precision 1975 complex number, a single precision real number, a long double or an int - if the code is configured 1976 with --with-scalar-type=real,complex --with-precision=single,double,longdouble,int,matsingle 1977 1978 1979 Level: beginner 1980 1981 .seealso: PetscReal, PassiveReal, PassiveScalar, MPIU_SCALAR, PetscInt 1982 M*/ 1983 1984 /*MC 1985 PetscReal - PETSc type that represents a real number version of PetscScalar 1986 1987 Level: beginner 1988 1989 .seealso: PetscScalar, PassiveReal, PassiveScalar 1990 M*/ 1991 1992 /*MC 1993 PassiveScalar - PETSc type that represents a PetscScalar 1994 Level: beginner 1995 1996 This is the same as a PetscScalar except in code that is automatically differentiated it is 1997 treated as a constant (not an indendent or dependent variable) 1998 1999 .seealso: PetscReal, PassiveReal, PetscScalar 2000 M*/ 2001 2002 /*MC 2003 PassiveReal - PETSc type that represents a PetscReal 2004 2005 Level: beginner 2006 2007 This is the same as a PetscReal except in code that is automatically differentiated it is 2008 treated as a constant (not an indendent or dependent variable) 2009 2010 .seealso: PetscScalar, PetscReal, PassiveScalar 2011 M*/ 2012 2013 /*MC 2014 MPIU_SCALAR - MPI datatype corresponding to PetscScalar 2015 2016 Level: beginner 2017 2018 Note: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalars 2019 pass this value 2020 2021 .seealso: PetscReal, PassiveReal, PassiveScalar, PetscScalar, MPIU_INT 2022 M*/ 2023 2024 #if defined(PETSC_HAVE_MPIIO) 2025 #if !defined(PETSC_WORDS_BIGENDIAN) 2026 PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2027 PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 2028 #else 2029 #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e) 2030 #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e) 2031 #endif 2032 #endif 2033 2034 /* the following petsc_static_inline require petscerror.h */ 2035 2036 /* Limit MPI to 32-bits */ 2037 #define PETSC_MPI_INT_MAX 2147483647 2038 #define PETSC_MPI_INT_MIN -2147483647 2039 /* Limit BLAS to 32-bits */ 2040 #define PETSC_BLAS_INT_MAX 2147483647 2041 #define PETSC_BLAS_INT_MIN -2147483647 2042 /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */ 2043 #define PETSC_HDF5_INT_MAX 2147483647 2044 #define PETSC_HDF5_INT_MIN -2147483647 2045 2046 #if defined(PETSC_USE_64BIT_INDICES) 2047 #define PetscMPIIntCheck(a) if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Message too long for MPI") 2048 #define PetscBLASIntCheck(a) if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK") 2049 #define PetscMPIIntCast(a) (PetscMPIInt)(a);PetscMPIIntCheck(a) 2050 #define PetscBLASIntCast(a) (PetscBLASInt)(a);PetscBLASIntCheck(a) 2051 2052 #if (PETSC_SIZEOF_SIZE_T == 4) 2053 #define PetscHDF5IntCheck(a) if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5") 2054 #define PetscHDF5IntCast(a) (hsize_t)(a);PetscHDF5IntCheck(a) 2055 #else 2056 #define PetscHDF5IntCheck(a) 2057 #define PetscHDF5IntCast(a) a 2058 #endif 2059 2060 #else 2061 #define PetscMPIIntCheck(a) 2062 #define PetscBLASIntCheck(a) 2063 #define PetscHDF5IntCheck(a) 2064 #define PetscMPIIntCast(a) a 2065 #define PetscBLASIntCast(a) a 2066 #define PetscHDF5IntCast(a) a 2067 #endif 2068 2069 /* 2070 The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2071 */ 2072 #if defined(hz) 2073 #undef hz 2074 #endif 2075 2076 /* For arrays that contain filenames or paths */ 2077 2078 2079 #if defined(PETSC_HAVE_LIMITS_H) 2080 #include <limits.h> 2081 #endif 2082 #if defined(PETSC_HAVE_SYS_PARAM_H) 2083 #include <sys/param.h> 2084 #endif 2085 #if defined(PETSC_HAVE_SYS_TYPES_H) 2086 #include <sys/types.h> 2087 #endif 2088 #if defined(MAXPATHLEN) 2089 # define PETSC_MAX_PATH_LEN MAXPATHLEN 2090 #elif defined(MAX_PATH) 2091 # define PETSC_MAX_PATH_LEN MAX_PATH 2092 #elif defined(_MAX_PATH) 2093 # define PETSC_MAX_PATH_LEN _MAX_PATH 2094 #else 2095 # define PETSC_MAX_PATH_LEN 4096 2096 #endif 2097 2098 /* Special support for C++ */ 2099 #include "petscsys.hh" 2100 2101 /*MC 2102 2103 UsingFortran - Fortran can be used with PETSc in four distinct approaches 2104 2105 $ 1) classic Fortran 77 style 2106 $#include "finclude/petscXXX.h" to work with material from the XXX component of PETSc 2107 $ XXX variablename 2108 $ You cannot use this approach if you wish to use the Fortran 90 specific PETSc routines 2109 $ which end in F90; such as VecGetArrayF90() 2110 $ 2111 $ 2) classic Fortran 90 style 2112 $#include "finclude/petscXXX.h" 2113 $#include "finclude/petscXXX.h90" to work with material from the XXX component of PETSc 2114 $ XXX variablename 2115 $ 2116 $ 3) Using Fortran modules 2117 $#include "finclude/petscXXXdef.h" 2118 $ use petscXXXX 2119 $ XXX variablename 2120 $ 2121 $ 4) Use Fortran modules and Fortran data types for PETSc types 2122 $#include "finclude/petscXXXdef.h" 2123 $ use petscXXXX 2124 $ type(XXX) variablename 2125 $ To use this approach you must ./configure PETSc with the additional 2126 $ option --with-fortran-datatypes You cannot use the type(XXX) declaration approach without using Fortran modules 2127 2128 Finally if you absolutely do not want to use any #include you can use either 2129 2130 $ 3a) skip the #include BUT you cannot use any PETSc data type names like Vec, Mat, PetscInt, PetscErrorCode etc 2131 $ and you must declare the variables as integer, for example 2132 $ integer variablename 2133 $ 2134 $ 4a) skip the #include, you use the object types like type(Vec) type(Mat) but cannot use the data type 2135 $ names like PetscErrorCode, PetscInt etc. again for those you must use integer 2136 2137 We recommend either 2 or 3. Approaches 2 and 3 provide type checking for most PETSc function calls; 4 has type checking 2138 for only a few PETSc functions. 2139 2140 Fortran type checking with interfaces is strick, this means you cannot pass a scalar value when an array value 2141 is expected (even though it is legal Fortran). For example when setting a single value in a matrix with MatSetValues() 2142 you cannot have something like 2143 $ PetscInt row,col 2144 $ PetscScalar val 2145 $ ... 2146 $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2147 You must instead have 2148 $ PetscInt row(1),col(1) 2149 $ PetscScalar val(1) 2150 $ ... 2151 $ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr) 2152 2153 2154 See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an example that can use all four approaches 2155 2156 Developer Notes: The finclude/petscXXXdef.h contain all the #defines (would be typedefs in C code) these 2157 automatically include their predecessors; for example finclude/petscvecdef.h includes finclude/petscisdef.h 2158 2159 The finclude/petscXXXX.h contain all the parameter statements for that package. These automatically include 2160 their finclude/petscXXXdef.h file but DO NOT automatically include their predecessors; for example 2161 finclude/petscvec.h does NOT automatically include finclude/petscis.h 2162 2163 The finclude/ftn-custom/petscXXXdef.h90 are not intended to be used directly in code, they define the 2164 Fortran data type type(XXX) (for example type(Vec)) when PETSc is ./configure with the --with-fortran-datatypes option. 2165 2166 The finclude/ftn-custom/petscXXX.h90 (not included directly by code) contain interface definitions for 2167 the PETSc Fortran stubs that have different bindings then their C version (for example VecGetArrayF90). 2168 2169 The finclude/ftn-auto/petscXXX.h90 (not included directly by code) contain interface definitions generated 2170 automatically by "make allfortranstubs". 2171 2172 The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/petscXXX.h90 and if ./configure 2173 was run with --with-fortran-interfaces it also includes the finclude/ftn-auto/petscXXX.h90 These DO NOT automatically 2174 include their predecessors 2175 2176 Level: beginner 2177 2178 M*/ 2179 2180 PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2181 PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2182 PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2183 PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2184 PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2185 PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 2186 2187 PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2188 PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2189 PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2190 PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2191 PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 2192 PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt*,PetscInt*,PetscInt*); 2193 PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 2194 PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 2195 PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 2196 PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2197 PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2198 PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2199 PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 2200 PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt*,const PetscInt*,PetscInt,const PetscInt*,const PetscInt*,PetscInt*,PetscInt**,PetscInt**); 2201 2202 PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2203 PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2204 2205 /*J 2206 PetscRandomType - String with the name of a PETSc randomizer 2207 with an optional dynamic library name, for example 2208 http://www.mcs.anl.gov/petsc/lib.a:myrandcreate() 2209 2210 Level: beginner 2211 2212 Notes: to use the SPRNG you must have ./configure PETSc 2213 with the option --download-sprng 2214 2215 .seealso: PetscRandomSetType(), PetscRandom 2216 J*/ 2217 #define PetscRandomType char* 2218 #define PETSCRAND "rand" 2219 #define PETSCRAND48 "rand48" 2220 #define PETSCSPRNG "sprng" 2221 2222 /* Logging support */ 2223 PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2224 2225 PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(const char[]); 2226 2227 /*S 2228 PetscRandom - Abstract PETSc object that manages generating random numbers 2229 2230 Level: intermediate 2231 2232 Concepts: random numbers 2233 2234 .seealso: PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType 2235 S*/ 2236 typedef struct _p_PetscRandom* PetscRandom; 2237 2238 /* Dynamic creation and loading functions */ 2239 PETSC_EXTERN PetscFList PetscRandomList; 2240 PETSC_EXTERN PetscBool PetscRandomRegisterAllCalled; 2241 2242 PETSC_EXTERN PetscErrorCode PetscRandomRegisterAll(const char []); 2243 PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscRandom)); 2244 PETSC_EXTERN PetscErrorCode PetscRandomRegisterDestroy(void); 2245 PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, const PetscRandomType); 2246 PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 2247 PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, const PetscRandomType*); 2248 PETSC_EXTERN PetscErrorCode PetscRandomViewFromOptions(PetscRandom,char*); 2249 PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2250 2251 /*MC 2252 PetscRandomRegisterDynamic - Adds a new PetscRandom component implementation 2253 2254 Synopsis: 2255 PetscErrorCode PetscRandomRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(PetscRandom)) 2256 2257 Not Collective 2258 2259 Input Parameters: 2260 + name - The name of a new user-defined creation routine 2261 . path - The path (either absolute or relative) of the library containing this routine 2262 . func_name - The name of routine to create method context 2263 - create_func - The creation routine itself 2264 2265 Notes: 2266 PetscRandomRegisterDynamic() may be called multiple times to add several user-defined randome number generators 2267 2268 If dynamic libraries are used, then the fourth input argument (routine_create) is ignored. 2269 2270 Sample usage: 2271 .vb 2272 PetscRandomRegisterDynamic("my_rand","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyPetscRandomtorCreate", MyPetscRandomtorCreate); 2273 .ve 2274 2275 Then, your random type can be chosen with the procedural interface via 2276 .vb 2277 PetscRandomCreate(MPI_Comm, PetscRandom *); 2278 PetscRandomSetType(PetscRandom,"my_random_name"); 2279 .ve 2280 or at runtime via the option 2281 .vb 2282 -random_type my_random_name 2283 .ve 2284 2285 Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values. 2286 2287 For an example of the code needed to interface your own random number generator see 2288 src/sys/random/impls/rand/rand.c 2289 2290 Level: advanced 2291 2292 .keywords: PetscRandom, register 2293 .seealso: PetscRandomRegisterAll(), PetscRandomRegisterDestroy(), PetscRandomRegister() 2294 M*/ 2295 #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 2296 #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,0) 2297 #else 2298 #define PetscRandomRegisterDynamic(a,b,c,d) PetscRandomRegister(a,b,c,d) 2299 #endif 2300 2301 PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2302 PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2303 PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2304 PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2305 PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2306 PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2307 PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2308 PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2309 PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2310 2311 PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2312 PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2313 PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2314 PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2315 PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2316 PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2317 PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 2318 2319 PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscDataType); 2320 PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType); 2321 PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool ); 2322 PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool ); 2323 PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2324 PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2325 PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2326 PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2327 PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2328 PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2329 PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2330 PETSC_EXTERN PetscErrorCode PetscOpenSocket(char*,int,int*); 2331 PETSC_EXTERN PetscErrorCode PetscWebServe(MPI_Comm,int); 2332 2333 /* 2334 In binary files variables are stored using the following lengths, 2335 regardless of how they are stored in memory on any one particular 2336 machine. Use these rather then sizeof() in computing sizes for 2337 PetscBinarySeek(). 2338 */ 2339 #define PETSC_BINARY_INT_SIZE (32/8) 2340 #define PETSC_BINARY_FLOAT_SIZE (32/8) 2341 #define PETSC_BINARY_CHAR_SIZE (8/8) 2342 #define PETSC_BINARY_SHORT_SIZE (16/8) 2343 #define PETSC_BINARY_DOUBLE_SIZE (64/8) 2344 #define PETSC_BINARY_SCALAR_SIZE sizeof(PetscScalar) 2345 2346 /*E 2347 PetscBinarySeekType - argument to PetscBinarySeek() 2348 2349 Level: advanced 2350 2351 .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek() 2352 E*/ 2353 typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType; 2354 PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2355 PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2356 PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2357 2358 PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2359 PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool ); 2360 PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2361 PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2362 PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2363 PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2364 2365 PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2366 PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2367 PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2368 PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2369 PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2370 2371 PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool *,PetscBool *); 2372 2373 /*E 2374 InsertMode - Whether entries are inserted or added into vectors or matrices 2375 2376 Level: beginner 2377 2378 .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2379 VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), 2380 MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd() 2381 E*/ 2382 typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES} InsertMode; 2383 2384 /*MC 2385 INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value 2386 2387 Level: beginner 2388 2389 .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2390 VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES, 2391 MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2392 2393 M*/ 2394 2395 /*MC 2396 ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the 2397 value into that location 2398 2399 Level: beginner 2400 2401 .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(), 2402 VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES, 2403 MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES 2404 2405 M*/ 2406 2407 /*MC 2408 MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location 2409 2410 Level: beginner 2411 2412 .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES 2413 2414 M*/ 2415 2416 /*S 2417 PetscSubcomm - Context of MPI subcommunicators, used by PCREDUNDANT 2418 2419 Level: advanced 2420 2421 Concepts: communicator, create 2422 S*/ 2423 typedef struct _n_PetscSubcomm* PetscSubcomm; 2424 2425 struct _n_PetscSubcomm { 2426 MPI_Comm parent; /* parent communicator */ 2427 MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2428 MPI_Comm comm; /* this communicator */ 2429 PetscInt n; /* num of subcommunicators under the parent communicator */ 2430 PetscInt color; /* color of processors belong to this communicator */ 2431 }; 2432 2433 typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType; 2434 PETSC_EXTERN const char *const PetscSubcommTypes[]; 2435 2436 PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2437 PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2438 PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2439 PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 2440 PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt,PetscMPIInt); 2441 2442 #include <petscctable.h> 2443 2444 2445 /* Reset __FUNCT__ in case the user does not define it themselves */ 2446 #undef __FUNCT__ 2447 #define __FUNCT__ "User provided function" 2448 2449 2450 #endif 2451