1 /* 2 This is the main PETSc include file (for C and C++). It is included by all 3 other PETSc include files, so it almost never has to be specifically included. 4 */ 5 #if !defined(PETSCSYS_H) 6 #define PETSCSYS_H 7 /* ========================================================================== */ 8 /* 9 petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is 10 found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include. 11 For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same 12 directory as the other PETSc include files. 13 */ 14 #include <petscconf.h> 15 #include <petscfix.h> 16 17 #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS) 18 /* 19 Feature test macros must be included before headers defined by IEEE Std 1003.1-2001 20 We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS 21 */ 22 # if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE) 23 # define _POSIX_C_SOURCE 200112L 24 # endif 25 # if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE) 26 # define _BSD_SOURCE 27 # endif 28 # if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE) 29 # define _DEFAULT_SOURCE 30 # endif 31 # if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE) 32 # define _GNU_SOURCE 33 # endif 34 #endif 35 36 #include <petscsystypes.h> 37 38 /* ========================================================================== */ 39 /* 40 This facilitates using the C version of PETSc from C++ and the C++ version from C. 41 */ 42 #if defined(__cplusplus) 43 # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX 44 #else 45 # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C 46 #endif 47 48 /* ========================================================================== */ 49 /* 50 Since PETSc manages its own extern "C" handling users should never include PETSc include 51 files within extern "C". This will generate a compiler error if a user does put the include 52 file within an extern "C". 53 */ 54 #if defined(__cplusplus) 55 void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double); 56 #endif 57 58 #if defined(__cplusplus) 59 # define PETSC_RESTRICT PETSC_CXX_RESTRICT 60 #else 61 # define PETSC_RESTRICT PETSC_C_RESTRICT 62 #endif 63 64 #if defined(__cplusplus) 65 # define PETSC_INLINE PETSC_CXX_INLINE 66 #else 67 # define PETSC_INLINE PETSC_C_INLINE 68 #endif 69 70 #define PETSC_STATIC_INLINE static PETSC_INLINE 71 72 #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */ 73 # define PETSC_DLLEXPORT __declspec(dllexport) 74 # define PETSC_DLLIMPORT __declspec(dllimport) 75 # define PETSC_VISIBILITY_INTERNAL 76 #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus) 77 # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 78 # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 79 # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 80 #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus) 81 # define PETSC_DLLEXPORT __attribute__((visibility ("default"))) 82 # define PETSC_DLLIMPORT __attribute__((visibility ("default"))) 83 # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden"))) 84 #else 85 # define PETSC_DLLEXPORT 86 # define PETSC_DLLIMPORT 87 # define PETSC_VISIBILITY_INTERNAL 88 #endif 89 90 #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */ 91 # define PETSC_VISIBILITY_PUBLIC PETSC_DLLEXPORT 92 #else /* Win32 users need this to import symbols from petsc.dll */ 93 # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT 94 #endif 95 96 /* 97 Functions tagged with PETSC_EXTERN in the header files are 98 always defined as extern "C" when compiled with C++ so they may be 99 used from C and are always visible in the shared libraries 100 */ 101 #if defined(__cplusplus) 102 # define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC 103 # define PETSC_EXTERN_TYPEDEF extern "C" 104 # define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL 105 #else 106 # define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC 107 # define PETSC_EXTERN_TYPEDEF 108 # define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL 109 #endif 110 111 #include <petscversion.h> 112 #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n https://www.mcs.anl.gov/petsc/\n" 113 114 /* ========================================================================== */ 115 116 /* 117 Defines the interface to MPI allowing the use of all MPI functions. 118 119 PETSc does not use the C++ binding of MPI at ALL. The following flag 120 makes sure the C++ bindings are not included. The C++ bindings REQUIRE 121 putting mpi.h before ANY C++ include files, we cannot control this 122 with all PETSc users. Users who want to use the MPI C++ bindings can include 123 mpicxx.h directly in their code 124 */ 125 #if !defined(MPICH_SKIP_MPICXX) 126 # define MPICH_SKIP_MPICXX 1 127 #endif 128 #if !defined(OMPI_SKIP_MPICXX) 129 # define OMPI_SKIP_MPICXX 1 130 #endif 131 #if defined(PETSC_HAVE_MPIUNI) 132 # include <petsc/mpiuni/mpi.h> 133 #else 134 # include <mpi.h> 135 #endif 136 137 /* 138 Perform various sanity checks that the correct mpi.h is being included at compile time. 139 This usually happens because 140 * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or 141 * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler 142 */ 143 #if defined(PETSC_HAVE_MPIUNI) 144 # if !defined(MPIUNI_H) 145 # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h" 146 # endif 147 #elif defined(PETSC_HAVE_I_MPI_NUMVERSION) 148 # if !defined(I_MPI_NUMVERSION) 149 # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h" 150 # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION 151 # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version" 152 # endif 153 #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION) 154 # if !defined(MVAPICH2_NUMVERSION) 155 # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h" 156 # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION 157 # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version" 158 # endif 159 #elif defined(PETSC_HAVE_MPICH_NUMVERSION) 160 # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION) 161 # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h" 162 # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000) 163 # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version" 164 # endif 165 #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION) 166 # if !defined(OMPI_MAJOR_VERSION) 167 # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h" 168 # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION) 169 # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version" 170 # endif 171 #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION) 172 # error "PETSc was configured with undetermined MPI - but now appears to be compiling using either of OpenMPI or a MPICH variant" 173 #endif 174 175 /* 176 Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler 177 see the top of mpicxx.h in the MPICH2 distribution. 178 */ 179 #include <stdio.h> 180 181 /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */ 182 #if !defined(MPIAPI) 183 #define MPIAPI 184 #endif 185 186 /* 187 Support for Clang (>=3.2) matching type tag arguments with void* buffer types. 188 This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine 189 does not match the actual type of the argument being passed in 190 */ 191 #if defined(__has_attribute) && defined(works_with_const_which_is_not_true) 192 # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype) 193 # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno))) 194 # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type))) 195 # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible))) 196 # endif 197 #endif 198 #if !defined(PetscAttrMPIPointerWithType) 199 # define PetscAttrMPIPointerWithType(bufno,typeno) 200 # define PetscAttrMPITypeTag(type) 201 # define PetscAttrMPITypeTagLayoutCompatible(type) 202 #endif 203 204 PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum); 205 PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool); 206 207 /*MC 208 MPIU_INT - MPI datatype corresponding to PetscInt 209 210 Notes: 211 In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value. 212 213 Level: beginner 214 215 .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX 216 M*/ 217 218 #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */ 219 # define MPIU_INT64 MPI_INT64_T 220 # define PetscInt64_FMT PRId64 221 #elif (PETSC_SIZEOF_LONG_LONG == 8) 222 # define MPIU_INT64 MPI_LONG_LONG_INT 223 # define PetscInt64_FMT "lld" 224 #elif defined(PETSC_HAVE___INT64) 225 # define MPIU_INT64 MPI_INT64_T 226 # define PetscInt64_FMT "ld" 227 #else 228 # error "cannot determine PetscInt64 type" 229 #endif 230 231 PETSC_EXTERN MPI_Datatype MPIU_FORTRANADDR; 232 233 #if defined(PETSC_USE_64BIT_INDICES) 234 # define MPIU_INT MPIU_INT64 235 # define PetscInt_FMT PetscInt64_FMT 236 #else 237 # define MPIU_INT MPI_INT 238 # define PetscInt_FMT "d" 239 #endif 240 241 /* 242 For the rare cases when one needs to send a size_t object with MPI 243 */ 244 PETSC_EXTERN MPI_Datatype MPIU_SIZE_T; 245 246 /* 247 You can use PETSC_STDOUT as a replacement of stdout. You can also change 248 the value of PETSC_STDOUT to redirect all standard output elsewhere 249 */ 250 PETSC_EXTERN FILE* PETSC_STDOUT; 251 252 /* 253 You can use PETSC_STDERR as a replacement of stderr. You can also change 254 the value of PETSC_STDERR to redirect all standard error elsewhere 255 */ 256 PETSC_EXTERN FILE* PETSC_STDERR; 257 258 /*MC 259 PetscUnlikely - hints the compiler that the given condition is usually FALSE 260 261 Synopsis: 262 #include <petscsys.h> 263 PetscBool PetscUnlikely(PetscBool cond) 264 265 Not Collective 266 267 Input Parameters: 268 . cond - condition or expression 269 270 Notes: 271 This returns the same truth value, it is only a hint to compilers that the resulting 272 branch is unlikely. 273 274 Level: advanced 275 276 .seealso: PetscLikely(), CHKERRQ 277 M*/ 278 279 /*MC 280 PetscLikely - hints the compiler that the given condition is usually TRUE 281 282 Synopsis: 283 #include <petscsys.h> 284 PetscBool PetscLikely(PetscBool cond) 285 286 Not Collective 287 288 Input Parameters: 289 . cond - condition or expression 290 291 Notes: 292 This returns the same truth value, it is only a hint to compilers that the resulting 293 branch is likely. 294 295 Level: advanced 296 297 .seealso: PetscUnlikely() 298 M*/ 299 #if defined(PETSC_HAVE_BUILTIN_EXPECT) 300 # define PetscUnlikely(cond) __builtin_expect(!!(cond),0) 301 # define PetscLikely(cond) __builtin_expect(!!(cond),1) 302 #else 303 # define PetscUnlikely(cond) (cond) 304 # define PetscLikely(cond) (cond) 305 #endif 306 307 /* 308 Declare extern C stuff after including external header files 309 */ 310 311 PETSC_EXTERN const char *const PetscBools[]; 312 313 /* 314 Defines elementary mathematics functions and constants. 315 */ 316 #include <petscmath.h> 317 318 PETSC_EXTERN const char *const PetscCopyModes[]; 319 320 /*MC 321 PETSC_IGNORE - same as NULL, means PETSc will ignore this argument 322 323 Level: beginner 324 325 Note: 326 Accepted by many PETSc functions to not set a parameter and instead use 327 some default 328 329 Fortran Notes: 330 This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER, 331 PETSC_NULL_DOUBLE_PRECISION etc 332 333 .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE 334 335 M*/ 336 #define PETSC_IGNORE NULL 337 338 /* This is deprecated */ 339 #define PETSC_NULL NULL 340 341 /*MC 342 PETSC_DECIDE - standard way of passing in integer or floating point parameter 343 where you wish PETSc to use the default. 344 345 Level: beginner 346 347 .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE 348 349 M*/ 350 #define PETSC_DECIDE -1 351 352 /*MC 353 PETSC_DETERMINE - standard way of passing in integer or floating point parameter 354 where you wish PETSc to compute the required value. 355 356 Level: beginner 357 358 Developer Note: 359 I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for 360 some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value. 361 362 .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes() 363 364 M*/ 365 #define PETSC_DETERMINE PETSC_DECIDE 366 367 /*MC 368 PETSC_DEFAULT - standard way of passing in integer or floating point parameter 369 where you wish PETSc to use the default. 370 371 Level: beginner 372 373 Fortran Notes: 374 You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL. 375 376 .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE 377 378 M*/ 379 #define PETSC_DEFAULT -2 380 381 /*MC 382 PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents 383 all the processes that PETSc knows about. 384 385 Level: beginner 386 387 Notes: 388 By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to 389 run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller) 390 communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling 391 PetscInitialize(), but after MPI_Init() has been called. 392 393 The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize() 394 is called because it may not have a valid value yet. 395 396 .seealso: PETSC_COMM_SELF 397 398 M*/ 399 PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD; 400 401 /*MC 402 PETSC_COMM_SELF - This is always MPI_COMM_SELF 403 404 Level: beginner 405 406 Notes: 407 Do not USE/access or set this variable before PetscInitialize() has been called. 408 409 .seealso: PETSC_COMM_WORLD 410 411 M*/ 412 #define PETSC_COMM_SELF MPI_COMM_SELF 413 414 PETSC_EXTERN PetscBool PetscBeganMPI; 415 PETSC_EXTERN PetscBool PetscInitializeCalled; 416 PETSC_EXTERN PetscBool PetscFinalizeCalled; 417 PETSC_EXTERN PetscBool PetscViennaCLSynchronize; 418 PETSC_EXTERN PetscBool PetscCUDASynchronize; 419 420 PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm)); 421 PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*); 422 PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*); 423 424 #if defined(PETSC_HAVE_CUDA) 425 PETSC_EXTERN PetscErrorCode PetscCUDAInitialize(MPI_Comm); 426 #endif 427 428 /*MC 429 PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this 430 431 Synopsis: 432 #include <petscsys.h> 433 PetscErrorCode PetscMalloc(size_t m,void **result) 434 435 Not Collective 436 437 Input Parameter: 438 . m - number of bytes to allocate 439 440 Output Parameter: 441 . result - memory allocated 442 443 Level: beginner 444 445 Notes: 446 Memory is always allocated at least double aligned 447 448 It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree(). 449 450 .seealso: PetscFree(), PetscNew() 451 452 M*/ 453 #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 454 455 /*MC 456 PetscRealloc - Rellocates memory 457 458 Synopsis: 459 #include <petscsys.h> 460 PetscErrorCode PetscRealloc(size_t m,void **result) 461 462 Not Collective 463 464 Input Parameters: 465 + m - number of bytes to allocate 466 - result - previous memory 467 468 Output Parameter: 469 . result - new memory allocated 470 471 Level: developer 472 473 Notes: 474 Memory is always allocated at least double aligned 475 476 .seealso: PetscMalloc(), PetscFree(), PetscNew() 477 478 M*/ 479 #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b))) 480 481 /*MC 482 PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment 483 484 Synopsis: 485 #include <petscsys.h> 486 void *PetscAddrAlign(void *addr) 487 488 Not Collective 489 490 Input Parameters: 491 . addr - address to align (any pointer type) 492 493 Level: developer 494 495 .seealso: PetscMallocAlign() 496 497 M*/ 498 #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 499 500 /*MC 501 PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN 502 503 Synopsis: 504 #include <petscsys.h> 505 PetscErrorCode PetscMalloc1(size_t m1,type **r1) 506 507 Not Collective 508 509 Input Parameter: 510 . m1 - number of elements to allocate (may be zero) 511 512 Output Parameter: 513 . r1 - memory allocated in first chunk 514 515 Note: 516 This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not 517 multiply the number of elements requested by the sizeof() the type. For example use 518 $ PetscInt *id; 519 $ PetscMalloc1(10,&id); 520 not 521 $ PetscInt *id; 522 $ PetscMalloc1(10*sizeof(PetscInt),&id); 523 524 Does not zero the memory allocatd, used PetscCalloc1() to obtain memory that has been zeroed. 525 526 Level: beginner 527 528 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 529 530 M*/ 531 #define PetscMalloc1(m1,r1) PetscMallocA(1,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 532 533 /*MC 534 PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN 535 536 Synopsis: 537 #include <petscsys.h> 538 PetscErrorCode PetscCalloc1(size_t m1,type **r1) 539 540 Not Collective 541 542 Input Parameter: 543 . m1 - number of elements to allocate in 1st chunk (may be zero) 544 545 Output Parameter: 546 . r1 - memory allocated in first chunk 547 548 Notes: 549 See PetsMalloc1() for more details on usage. 550 551 Level: beginner 552 553 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 554 555 M*/ 556 #define PetscCalloc1(m1,r1) PetscMallocA(1,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1)) 557 558 /*MC 559 PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN 560 561 Synopsis: 562 #include <petscsys.h> 563 PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2) 564 565 Not Collective 566 567 Input Parameter: 568 + m1 - number of elements to allocate in 1st chunk (may be zero) 569 - m2 - number of elements to allocate in 2nd chunk (may be zero) 570 571 Output Parameter: 572 + r1 - memory allocated in first chunk 573 - r2 - memory allocated in second chunk 574 575 Level: developer 576 577 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2() 578 579 M*/ 580 #define PetscMalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 581 582 /*MC 583 PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN 584 585 Synopsis: 586 #include <petscsys.h> 587 PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2) 588 589 Not Collective 590 591 Input Parameter: 592 + m1 - number of elements to allocate in 1st chunk (may be zero) 593 - m2 - number of elements to allocate in 2nd chunk (may be zero) 594 595 Output Parameter: 596 + r1 - memory allocated in first chunk 597 - r2 - memory allocated in second chunk 598 599 Level: developer 600 601 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2() 602 603 M*/ 604 #define PetscCalloc2(m1,r1,m2,r2) PetscMallocA(2,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2)) 605 606 /*MC 607 PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN 608 609 Synopsis: 610 #include <petscsys.h> 611 PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 612 613 Not Collective 614 615 Input Parameter: 616 + m1 - number of elements to allocate in 1st chunk (may be zero) 617 . m2 - number of elements to allocate in 2nd chunk (may be zero) 618 - m3 - number of elements to allocate in 3rd chunk (may be zero) 619 620 Output Parameter: 621 + r1 - memory allocated in first chunk 622 . r2 - memory allocated in second chunk 623 - r3 - memory allocated in third chunk 624 625 Level: developer 626 627 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3() 628 629 M*/ 630 #define PetscMalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 631 632 /*MC 633 PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 634 635 Synopsis: 636 #include <petscsys.h> 637 PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3) 638 639 Not Collective 640 641 Input Parameter: 642 + m1 - number of elements to allocate in 1st chunk (may be zero) 643 . m2 - number of elements to allocate in 2nd chunk (may be zero) 644 - m3 - number of elements to allocate in 3rd chunk (may be zero) 645 646 Output Parameter: 647 + r1 - memory allocated in first chunk 648 . r2 - memory allocated in second chunk 649 - r3 - memory allocated in third chunk 650 651 Level: developer 652 653 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3() 654 655 M*/ 656 #define PetscCalloc3(m1,r1,m2,r2,m3,r3) PetscMallocA(3,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3)) 657 658 /*MC 659 PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN 660 661 Synopsis: 662 #include <petscsys.h> 663 PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 664 665 Not Collective 666 667 Input Parameter: 668 + m1 - number of elements to allocate in 1st chunk (may be zero) 669 . m2 - number of elements to allocate in 2nd chunk (may be zero) 670 . m3 - number of elements to allocate in 3rd chunk (may be zero) 671 - m4 - number of elements to allocate in 4th chunk (may be zero) 672 673 Output Parameter: 674 + r1 - memory allocated in first chunk 675 . r2 - memory allocated in second chunk 676 . r3 - memory allocated in third chunk 677 - r4 - memory allocated in fourth chunk 678 679 Level: developer 680 681 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 682 683 M*/ 684 #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 685 686 /*MC 687 PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 688 689 Synopsis: 690 #include <petscsys.h> 691 PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4) 692 693 Not Collective 694 695 Input Parameters: 696 + m1 - number of elements to allocate in 1st chunk (may be zero) 697 . m2 - number of elements to allocate in 2nd chunk (may be zero) 698 . m3 - number of elements to allocate in 3rd chunk (may be zero) 699 - m4 - number of elements to allocate in 4th chunk (may be zero) 700 701 Output Parameters: 702 + r1 - memory allocated in first chunk 703 . r2 - memory allocated in second chunk 704 . r3 - memory allocated in third chunk 705 - r4 - memory allocated in fourth chunk 706 707 Level: developer 708 709 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4() 710 711 M*/ 712 #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) PetscMallocA(4,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4)) 713 714 /*MC 715 PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN 716 717 Synopsis: 718 #include <petscsys.h> 719 PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 720 721 Not Collective 722 723 Input Parameters: 724 + m1 - number of elements to allocate in 1st chunk (may be zero) 725 . m2 - number of elements to allocate in 2nd chunk (may be zero) 726 . m3 - number of elements to allocate in 3rd chunk (may be zero) 727 . m4 - number of elements to allocate in 4th chunk (may be zero) 728 - m5 - number of elements to allocate in 5th chunk (may be zero) 729 730 Output Parameters: 731 + r1 - memory allocated in first chunk 732 . r2 - memory allocated in second chunk 733 . r3 - memory allocated in third chunk 734 . r4 - memory allocated in fourth chunk 735 - r5 - memory allocated in fifth chunk 736 737 Level: developer 738 739 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5() 740 741 M*/ 742 #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 743 744 /*MC 745 PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 746 747 Synopsis: 748 #include <petscsys.h> 749 PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5) 750 751 Not Collective 752 753 Input Parameters: 754 + m1 - number of elements to allocate in 1st chunk (may be zero) 755 . m2 - number of elements to allocate in 2nd chunk (may be zero) 756 . m3 - number of elements to allocate in 3rd chunk (may be zero) 757 . m4 - number of elements to allocate in 4th chunk (may be zero) 758 - m5 - number of elements to allocate in 5th chunk (may be zero) 759 760 Output Parameters: 761 + r1 - memory allocated in first chunk 762 . r2 - memory allocated in second chunk 763 . r3 - memory allocated in third chunk 764 . r4 - memory allocated in fourth chunk 765 - r5 - memory allocated in fifth chunk 766 767 Level: developer 768 769 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5() 770 771 M*/ 772 #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) PetscMallocA(5,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5)) 773 774 /*MC 775 PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN 776 777 Synopsis: 778 #include <petscsys.h> 779 PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 780 781 Not Collective 782 783 Input Parameters: 784 + m1 - number of elements to allocate in 1st chunk (may be zero) 785 . m2 - number of elements to allocate in 2nd chunk (may be zero) 786 . m3 - number of elements to allocate in 3rd chunk (may be zero) 787 . m4 - number of elements to allocate in 4th chunk (may be zero) 788 . m5 - number of elements to allocate in 5th chunk (may be zero) 789 - m6 - number of elements to allocate in 6th chunk (may be zero) 790 791 Output Parameteasr: 792 + r1 - memory allocated in first chunk 793 . r2 - memory allocated in second chunk 794 . r3 - memory allocated in third chunk 795 . r4 - memory allocated in fourth chunk 796 . r5 - memory allocated in fifth chunk 797 - r6 - memory allocated in sixth chunk 798 799 Level: developer 800 801 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6() 802 803 M*/ 804 #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 805 806 /*MC 807 PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 808 809 Synopsis: 810 #include <petscsys.h> 811 PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6) 812 813 Not Collective 814 815 Input Parameters: 816 + m1 - number of elements to allocate in 1st chunk (may be zero) 817 . m2 - number of elements to allocate in 2nd chunk (may be zero) 818 . m3 - number of elements to allocate in 3rd chunk (may be zero) 819 . m4 - number of elements to allocate in 4th chunk (may be zero) 820 . m5 - number of elements to allocate in 5th chunk (may be zero) 821 - m6 - number of elements to allocate in 6th chunk (may be zero) 822 823 Output Parameters: 824 + r1 - memory allocated in first chunk 825 . r2 - memory allocated in second chunk 826 . r3 - memory allocated in third chunk 827 . r4 - memory allocated in fourth chunk 828 . r5 - memory allocated in fifth chunk 829 - r6 - memory allocated in sixth chunk 830 831 Level: developer 832 833 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6() 834 835 M*/ 836 #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) PetscMallocA(6,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6)) 837 838 /*MC 839 PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN 840 841 Synopsis: 842 #include <petscsys.h> 843 PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 844 845 Not Collective 846 847 Input Parameters: 848 + m1 - number of elements to allocate in 1st chunk (may be zero) 849 . m2 - number of elements to allocate in 2nd chunk (may be zero) 850 . m3 - number of elements to allocate in 3rd chunk (may be zero) 851 . m4 - number of elements to allocate in 4th chunk (may be zero) 852 . m5 - number of elements to allocate in 5th chunk (may be zero) 853 . m6 - number of elements to allocate in 6th chunk (may be zero) 854 - m7 - number of elements to allocate in 7th chunk (may be zero) 855 856 Output Parameters: 857 + r1 - memory allocated in first chunk 858 . r2 - memory allocated in second chunk 859 . r3 - memory allocated in third chunk 860 . r4 - memory allocated in fourth chunk 861 . r5 - memory allocated in fifth chunk 862 . r6 - memory allocated in sixth chunk 863 - r7 - memory allocated in seventh chunk 864 865 Level: developer 866 867 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7() 868 869 M*/ 870 #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_FALSE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 871 872 /*MC 873 PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN 874 875 Synopsis: 876 #include <petscsys.h> 877 PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7) 878 879 Not Collective 880 881 Input Parameters: 882 + m1 - number of elements to allocate in 1st chunk (may be zero) 883 . m2 - number of elements to allocate in 2nd chunk (may be zero) 884 . m3 - number of elements to allocate in 3rd chunk (may be zero) 885 . m4 - number of elements to allocate in 4th chunk (may be zero) 886 . m5 - number of elements to allocate in 5th chunk (may be zero) 887 . m6 - number of elements to allocate in 6th chunk (may be zero) 888 - m7 - number of elements to allocate in 7th chunk (may be zero) 889 890 Output Parameters: 891 + r1 - memory allocated in first chunk 892 . r2 - memory allocated in second chunk 893 . r3 - memory allocated in third chunk 894 . r4 - memory allocated in fourth chunk 895 . r5 - memory allocated in fifth chunk 896 . r6 - memory allocated in sixth chunk 897 - r7 - memory allocated in seventh chunk 898 899 Level: developer 900 901 .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7() 902 903 M*/ 904 #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) PetscMallocA(7,PETSC_TRUE,__LINE__,PETSC_FUNCTION_NAME,__FILE__,(size_t)(m1)*sizeof(**(r1)),(r1),(size_t)(m2)*sizeof(**(r2)),(r2),(size_t)(m3)*sizeof(**(r3)),(r3),(size_t)(m4)*sizeof(**(r4)),(r4),(size_t)(m5)*sizeof(**(r5)),(r5),(size_t)(m6)*sizeof(**(r6)),(r6),(size_t)(m7)*sizeof(**(r7)),(r7)) 905 906 /*MC 907 PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN 908 909 Synopsis: 910 #include <petscsys.h> 911 PetscErrorCode PetscNew(type **result) 912 913 Not Collective 914 915 Output Parameter: 916 . result - memory allocated, sized to match pointer type 917 918 Level: beginner 919 920 .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1() 921 922 M*/ 923 #define PetscNew(b) PetscCalloc1(1,(b)) 924 925 /*MC 926 PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated 927 with the given object using PetscLogObjectMemory(). 928 929 Synopsis: 930 #include <petscsys.h> 931 PetscErrorCode PetscNewLog(PetscObject obj,type **result) 932 933 Not Collective 934 935 Input Parameter: 936 . obj - object memory is logged to 937 938 Output Parameter: 939 . result - memory allocated, sized to match pointer type 940 941 Level: developer 942 943 .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1() 944 945 M*/ 946 #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b)))) 947 948 /*MC 949 PetscFree - Frees memory 950 951 Synopsis: 952 #include <petscsys.h> 953 PetscErrorCode PetscFree(void *memory) 954 955 Not Collective 956 957 Input Parameter: 958 . memory - memory to free (the pointer is ALWAYS set to NULL upon sucess) 959 960 Level: beginner 961 962 Notes: 963 Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc. 964 965 It is safe to call PetscFree() on a NULL pointer. 966 967 .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1() 968 969 M*/ 970 #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = 0,0)) 971 972 /*MC 973 PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2() 974 975 Synopsis: 976 #include <petscsys.h> 977 PetscErrorCode PetscFree2(void *memory1,void *memory2) 978 979 Not Collective 980 981 Input Parameters: 982 + memory1 - memory to free 983 - memory2 - 2nd memory to free 984 985 Level: developer 986 987 Notes: 988 Memory must have been obtained with PetscMalloc2() 989 990 .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree() 991 992 M*/ 993 #define PetscFree2(m1,m2) PetscFreeA(2,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2)) 994 995 /*MC 996 PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3() 997 998 Synopsis: 999 #include <petscsys.h> 1000 PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3) 1001 1002 Not Collective 1003 1004 Input Parameters: 1005 + memory1 - memory to free 1006 . memory2 - 2nd memory to free 1007 - memory3 - 3rd memory to free 1008 1009 Level: developer 1010 1011 Notes: 1012 Memory must have been obtained with PetscMalloc3() 1013 1014 .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3() 1015 1016 M*/ 1017 #define PetscFree3(m1,m2,m3) PetscFreeA(3,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3)) 1018 1019 /*MC 1020 PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4() 1021 1022 Synopsis: 1023 #include <petscsys.h> 1024 PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4) 1025 1026 Not Collective 1027 1028 Input Parameters: 1029 + m1 - memory to free 1030 . m2 - 2nd memory to free 1031 . m3 - 3rd memory to free 1032 - m4 - 4th memory to free 1033 1034 Level: developer 1035 1036 Notes: 1037 Memory must have been obtained with PetscMalloc4() 1038 1039 .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4() 1040 1041 M*/ 1042 #define PetscFree4(m1,m2,m3,m4) PetscFreeA(4,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4)) 1043 1044 /*MC 1045 PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5() 1046 1047 Synopsis: 1048 #include <petscsys.h> 1049 PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5) 1050 1051 Not Collective 1052 1053 Input Parameters: 1054 + m1 - memory to free 1055 . m2 - 2nd memory to free 1056 . m3 - 3rd memory to free 1057 . m4 - 4th memory to free 1058 - m5 - 5th memory to free 1059 1060 Level: developer 1061 1062 Notes: 1063 Memory must have been obtained with PetscMalloc5() 1064 1065 .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5() 1066 1067 M*/ 1068 #define PetscFree5(m1,m2,m3,m4,m5) PetscFreeA(5,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5)) 1069 1070 /*MC 1071 PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6() 1072 1073 Synopsis: 1074 #include <petscsys.h> 1075 PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6) 1076 1077 Not Collective 1078 1079 Input Parameters: 1080 + m1 - memory to free 1081 . m2 - 2nd memory to free 1082 . m3 - 3rd memory to free 1083 . m4 - 4th memory to free 1084 . m5 - 5th memory to free 1085 - m6 - 6th memory to free 1086 1087 1088 Level: developer 1089 1090 Notes: 1091 Memory must have been obtained with PetscMalloc6() 1092 1093 .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6() 1094 1095 M*/ 1096 #define PetscFree6(m1,m2,m3,m4,m5,m6) PetscFreeA(6,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6)) 1097 1098 /*MC 1099 PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7() 1100 1101 Synopsis: 1102 #include <petscsys.h> 1103 PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7) 1104 1105 Not Collective 1106 1107 Input Parameters: 1108 + m1 - memory to free 1109 . m2 - 2nd memory to free 1110 . m3 - 3rd memory to free 1111 . m4 - 4th memory to free 1112 . m5 - 5th memory to free 1113 . m6 - 6th memory to free 1114 - m7 - 7th memory to free 1115 1116 1117 Level: developer 1118 1119 Notes: 1120 Memory must have been obtained with PetscMalloc7() 1121 1122 .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(), 1123 PetscMalloc7() 1124 1125 M*/ 1126 #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) PetscFreeA(7,__LINE__,PETSC_FUNCTION_NAME,__FILE__,&(m1),&(m2),&(m3),&(m4),&(m5),&(m6),&(m7)) 1127 1128 PETSC_EXTERN PetscErrorCode PetscMallocA(int,PetscBool,int,const char *,const char *,size_t,void *,...); 1129 PETSC_EXTERN PetscErrorCode PetscFreeA(int,int,const char *,const char *,void *,...); 1130 PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,PetscBool,int,const char[],const char[],void**); 1131 PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]); 1132 PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**); 1133 PETSC_EXTERN PetscErrorCode PetscMallocSetCoalesce(PetscBool); 1134 PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,PetscBool,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]),PetscErrorCode (*)(size_t,int,const char[],const char[], void **)); 1135 PETSC_EXTERN PetscErrorCode PetscMallocClear(void); 1136 1137 /* 1138 Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair. 1139 */ 1140 PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void); 1141 PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void); 1142 1143 #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE 1144 #define MPIU_2PETSCLOGDOUBLE MPI_2DOUBLE_PRECISION 1145 1146 /* 1147 Routines for tracing memory corruption/bleeding with default PETSc memory allocation 1148 */ 1149 PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *); 1150 PETSC_EXTERN PetscErrorCode PetscMallocView(FILE *); 1151 PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *); 1152 PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *); 1153 PETSC_EXTERN PetscErrorCode PetscMallocPushMaximumUsage(int); 1154 PETSC_EXTERN PetscErrorCode PetscMallocPopMaximumUsage(int,PetscLogDouble*); 1155 PETSC_EXTERN PetscErrorCode PetscMallocSetDebug(PetscBool,PetscBool); 1156 PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*,PetscBool*,PetscBool*); 1157 PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]); 1158 PETSC_EXTERN PetscErrorCode PetscMallocViewSet(PetscLogDouble); 1159 PETSC_EXTERN PetscErrorCode PetscMallocViewGet(PetscBool*); 1160 1161 PETSC_EXTERN const char *const PetscDataTypes[]; 1162 PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*); 1163 PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*); 1164 PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*); 1165 PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*); 1166 1167 /* 1168 Basic memory and string operations. These are usually simple wrappers 1169 around the basic Unix system calls, but a few of them have additional 1170 functionality and/or error checking. 1171 */ 1172 PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType); 1173 PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *); 1174 PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*); 1175 PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***); 1176 PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **); 1177 PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *); 1178 PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *); 1179 PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *); 1180 PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *); 1181 PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]); 1182 PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]); 1183 PETSC_EXTERN PetscErrorCode PetscStrlcat(char[],const char[],size_t); 1184 PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t); 1185 PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]); 1186 PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]); 1187 PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]); 1188 PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]); 1189 PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]); 1190 PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]); 1191 PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*); 1192 PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*); 1193 PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*); 1194 PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]); 1195 PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***); 1196 PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***); 1197 PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***); 1198 PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***); 1199 PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t); 1200 1201 PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *); 1202 1203 PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*); 1204 PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]); 1205 PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*); 1206 PETSC_EXTERN PetscErrorCode PetscStrInList(const char[],const char[],char,PetscBool*); 1207 1208 PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*); 1209 PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*); 1210 1211 /* 1212 These are MPI operations for MPI_Allreduce() etc 1213 */ 1214 PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP; 1215 #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1216 PETSC_EXTERN MPI_Op MPIU_SUM; 1217 #else 1218 #define MPIU_SUM MPI_SUM 1219 #endif 1220 #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16) 1221 PETSC_EXTERN MPI_Op MPIU_MAX; 1222 PETSC_EXTERN MPI_Op MPIU_MIN; 1223 #else 1224 #define MPIU_MAX MPI_MAX 1225 #define MPIU_MIN MPI_MIN 1226 #endif 1227 PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*); 1228 1229 PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1230 PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm); 1231 1232 PETSC_EXTERN const char *const PetscFileModes[]; 1233 1234 /* 1235 Defines PETSc error handling. 1236 */ 1237 #include <petscerror.h> 1238 1239 #define PETSC_SMALLEST_CLASSID 1211211 1240 PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID; 1241 PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID; 1242 PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *); 1243 1244 /* 1245 Routines that get memory usage information from the OS 1246 */ 1247 PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *); 1248 PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *); 1249 PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void); 1250 PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]); 1251 1252 PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []); 1253 PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal); 1254 1255 /* 1256 Initialization of PETSc 1257 */ 1258 PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]); 1259 PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]); 1260 PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void); 1261 PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *); 1262 PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *); 1263 PETSC_EXTERN PetscErrorCode PetscFinalize(void); 1264 PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void); 1265 PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***); 1266 PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***); 1267 PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **); 1268 1269 PETSC_EXTERN PetscErrorCode PetscEnd(void); 1270 PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void); 1271 1272 PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]); 1273 PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void); 1274 PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void); 1275 PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]); 1276 1277 /* 1278 These are so that in extern C code we can caste function pointers to non-extern C 1279 function pointers. Since the regular C++ code expects its function pointers to be C++ 1280 */ 1281 PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void); 1282 PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void); 1283 PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void); 1284 1285 /* 1286 Functions that can act on any PETSc object. 1287 */ 1288 PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*); 1289 PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *); 1290 PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *); 1291 PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]); 1292 PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []); 1293 PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]); 1294 PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]); 1295 PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]); 1296 PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt); 1297 PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*); 1298 PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt); 1299 PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject); 1300 PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*); 1301 PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject); 1302 PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *); 1303 PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject); 1304 PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]); 1305 PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *); 1306 PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void)); 1307 #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d)) 1308 PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject); 1309 PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject); 1310 PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject); 1311 PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject); 1312 PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *); 1313 1314 #include <petscviewertypes.h> 1315 #include <petscoptions.h> 1316 1317 PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*); 1318 1319 PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]); 1320 PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]); 1321 PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer); 1322 PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer); 1323 #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr)) 1324 PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void)); 1325 PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]); 1326 PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]); 1327 PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]); 1328 PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]); 1329 PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]); 1330 PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject); 1331 PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void); 1332 PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]); 1333 PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject); 1334 PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *); 1335 PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *); 1336 PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1337 PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompareAny(PetscObject,PetscBool*,const char[],...); 1338 PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void)); 1339 PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void); 1340 1341 #if defined(PETSC_HAVE_SAWS) 1342 PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void); 1343 PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject); 1344 PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool); 1345 PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject); 1346 PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject); 1347 PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject); 1348 PETSC_EXTERN void PetscStackSAWsGrantAccess(void); 1349 PETSC_EXTERN void PetscStackSAWsTakeAccess(void); 1350 PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void); 1351 PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void); 1352 1353 #else 1354 #define PetscSAWsBlock() 0 1355 #define PetscObjectSAWsViewOff(obj) 0 1356 #define PetscObjectSAWsSetBlock(obj,flg) 0 1357 #define PetscObjectSAWsBlock(obj) 0 1358 #define PetscObjectSAWsGrantAccess(obj) 0 1359 #define PetscObjectSAWsTakeAccess(obj) 0 1360 #define PetscStackViewSAWs() 0 1361 #define PetscStackSAWsViewOff() 0 1362 #define PetscStackSAWsTakeAccess() 1363 #define PetscStackSAWsGrantAccess() 1364 1365 #endif 1366 1367 PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *); 1368 PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *); 1369 PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **); 1370 1371 #if defined(PETSC_USE_DEBUG) 1372 PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**); 1373 #endif 1374 PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool); 1375 1376 PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*); 1377 PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*); 1378 PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*); 1379 PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject); 1380 PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]); 1381 PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *); 1382 1383 /* 1384 Dynamic library lists. Lists of names of routines in objects or in dynamic 1385 link libraries that will be loaded as needed. 1386 */ 1387 1388 #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr)) 1389 PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void)); 1390 PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*); 1391 #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr)) 1392 PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void)); 1393 PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[],const char[]); 1394 PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *); 1395 PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer); 1396 PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*); 1397 1398 PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded; 1399 PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]); 1400 PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]); 1401 PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **); 1402 PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary); 1403 PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *); 1404 PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *); 1405 PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary); 1406 1407 /* 1408 Useful utility routines 1409 */ 1410 PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*); 1411 PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*); 1412 PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt); 1413 PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt); 1414 PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject); 1415 PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*); 1416 PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxInt(MPI_Comm,PetscInt[],PetscInt[]); 1417 PETSC_EXTERN PetscErrorCode PetscGlobalMinMaxReal(MPI_Comm,PetscReal[],PetscReal[]); 1418 1419 /*MC 1420 PetscNot - negates a logical type value and returns result as a PetscBool 1421 1422 Notes: 1423 This is useful in cases like 1424 $ int *a; 1425 $ PetscBool flag = PetscNot(a) 1426 where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C. 1427 1428 Level: beginner 1429 1430 .seealso : PetscBool, PETSC_TRUE, PETSC_FALSE 1431 M*/ 1432 #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE) 1433 1434 /*MC 1435 PetscHelpPrintf - Prints help messages. 1436 1437 Synopsis: 1438 #include <petscsys.h> 1439 PetscErrorCode (*PetscHelpPrintf)(const char format[],...); 1440 1441 Not Collective 1442 1443 Input Parameters: 1444 . format - the usual printf() format string 1445 1446 Level: developer 1447 1448 Fortran Note: 1449 This routine is not supported in Fortran. 1450 1451 1452 .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf() 1453 M*/ 1454 PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...); 1455 1456 /* 1457 Defines PETSc profiling. 1458 */ 1459 #include <petsclog.h> 1460 1461 /* 1462 Simple PETSc parallel IO for ASCII printing 1463 */ 1464 PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]); 1465 PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**); 1466 PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*); 1467 PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...); 1468 PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...); 1469 PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...); 1470 PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...); 1471 PETSC_EXTERN PetscErrorCode PetscFormatRealArray(char[],size_t,const char*,PetscInt,const PetscReal[]); 1472 1473 PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...); 1474 PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...); 1475 PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...); 1476 1477 PETSC_EXTERN PetscErrorCode PetscFormatConvertGetSize(const char*,size_t*); 1478 PETSC_EXTERN PetscErrorCode PetscFormatConvert(const char*,char *); 1479 1480 #if defined(PETSC_HAVE_POPEN) 1481 PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **); 1482 PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*); 1483 PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]); 1484 #endif 1485 1486 PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...); 1487 PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...); 1488 PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*); 1489 PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]); 1490 PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**); 1491 PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**); 1492 PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]); 1493 1494 PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID; 1495 PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **); 1496 PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *); 1497 PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*); 1498 PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *); 1499 PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*)); 1500 PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*); 1501 1502 /* 1503 For use in debuggers 1504 */ 1505 PETSC_EXTERN PetscMPIInt PetscGlobalRank; 1506 PETSC_EXTERN PetscMPIInt PetscGlobalSize; 1507 PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer); 1508 PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer); 1509 PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer); 1510 1511 #include <stddef.h> 1512 #include <string.h> /* for memcpy, memset */ 1513 #include <stdlib.h> 1514 1515 #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__) 1516 #include <xmmintrin.h> 1517 #endif 1518 1519 /*@C 1520 PetscMemmove - Copies n bytes, beginning at location b, to the space 1521 beginning at location a. Copying between regions that overlap will 1522 take place correctly. Use PetscMemcpy() if the locations do not overlap 1523 1524 Not Collective 1525 1526 Input Parameters: 1527 + b - pointer to initial memory space 1528 . a - pointer to copy space 1529 - n - length (in bytes) of space to copy 1530 1531 Level: intermediate 1532 1533 Note: 1534 PetscArraymove() is preferred 1535 This routine is analogous to memmove(). 1536 1537 Developers Note: This is inlined for performance 1538 1539 .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscStrallocpy(), 1540 PetscArraymove() 1541 @*/ 1542 PETSC_STATIC_INLINE PetscErrorCode PetscMemmove(void *a,const void *b,size_t n) 1543 { 1544 PetscFunctionBegin; 1545 if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to null pointer"); 1546 if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1547 #if !defined(PETSC_HAVE_MEMMOVE) 1548 if (a < b) { 1549 if (a <= b - n) memcpy(a,b,n); 1550 else { 1551 memcpy(a,b,(int)(b - a)); 1552 PetscMemmove(b,b + (int)(b - a),n - (int)(b - a)); 1553 } 1554 } else { 1555 if (b <= a - n) memcpy(a,b,n); 1556 else { 1557 memcpy(b + n,b + (n - (int)(a - b)),(int)(a - b)); 1558 PetscMemmove(a,b,n - (int)(a - b)); 1559 } 1560 } 1561 #else 1562 memmove((char*)(a),(char*)(b),n); 1563 #endif 1564 PetscFunctionReturn(0); 1565 } 1566 1567 /*@C 1568 PetscMemcpy - Copies n bytes, beginning at location b, to the space 1569 beginning at location a. The two memory regions CANNOT overlap, use 1570 PetscMemmove() in that case. 1571 1572 Not Collective 1573 1574 Input Parameters: 1575 + b - pointer to initial memory space 1576 - n - length (in bytes) of space to copy 1577 1578 Output Parameter: 1579 . a - pointer to copy space 1580 1581 Level: intermediate 1582 1583 Compile Option: 1584 PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used 1585 for memory copies on double precision values. 1586 PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used 1587 for memory copies on double precision values. 1588 PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used 1589 for memory copies on double precision values. 1590 1591 Note: 1592 Prefer PetscArraycpy() 1593 This routine is analogous to memcpy(). 1594 Not available from Fortran 1595 1596 Developer Note: this is inlined for fastest performance 1597 1598 .seealso: PetscMemzero(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1599 1600 @*/ 1601 PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n) 1602 { 1603 #if defined(PETSC_USE_DEBUG) 1604 size_t al = (size_t) a,bl = (size_t) b; 1605 size_t nl = (size_t) n; 1606 PetscFunctionBegin; 1607 if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer"); 1608 if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer"); 1609 #else 1610 PetscFunctionBegin; 1611 #endif 1612 if (a != b && n > 0) { 1613 #if defined(PETSC_USE_DEBUG) 1614 if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\ 1615 or make sure your copy regions and lengths are correct. \n\ 1616 Length (bytes) %ld first address %ld second address %ld",nl,al,bl); 1617 #endif 1618 #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY)) 1619 if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1620 size_t len = n/sizeof(PetscScalar); 1621 #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) 1622 PetscBLASInt one = 1,blen; 1623 PetscErrorCode ierr; 1624 ierr = PetscBLASIntCast(len,&blen);CHKERRQ(ierr); 1625 PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one)); 1626 #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY) 1627 fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a); 1628 #else 1629 size_t i; 1630 PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a; 1631 for (i=0; i<len; i++) y[i] = x[i]; 1632 #endif 1633 } else { 1634 memcpy((char*)(a),(char*)(b),n); 1635 } 1636 #else 1637 memcpy((char*)(a),(char*)(b),n); 1638 #endif 1639 } 1640 PetscFunctionReturn(0); 1641 } 1642 1643 /*@C 1644 PetscMemzero - Zeros the specified memory. 1645 1646 Not Collective 1647 1648 Input Parameters: 1649 + a - pointer to beginning memory location 1650 - n - length (in bytes) of memory to initialize 1651 1652 Level: intermediate 1653 1654 Compile Option: 1655 PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens 1656 to be faster than the memset() routine. This flag causes the bzero() routine to be used. 1657 1658 Not available from Fortran 1659 Prefer PetscArrayzero() 1660 1661 Developer Note: this is inlined for fastest performance 1662 1663 .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy() 1664 @*/ 1665 PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n) 1666 { 1667 if (n > 0) { 1668 #if defined(PETSC_USE_DEBUG) 1669 if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer"); 1670 #endif 1671 #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) 1672 if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1673 size_t i,len = n/sizeof(PetscScalar); 1674 PetscScalar *x = (PetscScalar*)a; 1675 for (i=0; i<len; i++) x[i] = 0.0; 1676 } else { 1677 #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1678 if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) { 1679 PetscInt len = n/sizeof(PetscScalar); 1680 fortranzero_(&len,(PetscScalar*)a); 1681 } else { 1682 #endif 1683 #if defined(PETSC_PREFER_BZERO) 1684 bzero((char *)a,n); 1685 #else 1686 memset((char*)a,0,n); 1687 #endif 1688 #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO) 1689 } 1690 #endif 1691 } 1692 return 0; 1693 } 1694 1695 /*MC 1696 PetscArraycmp - Compares two arrays in memory. 1697 1698 Synopsis: 1699 #include <petscsys.h> 1700 PetscErrorCode PetscArraycmp(const anytype *str1,const anytype *str2,size_t cnt,PetscBool *e) 1701 1702 Not Collective 1703 1704 Input Parameters: 1705 + str1 - First array 1706 . str2 - Second array 1707 - cnt - Count of the array, not in bytes, but number of entries in the arrays 1708 1709 Output Parameters: 1710 . e - PETSC_TRUE if equal else PETSC_FALSE. 1711 1712 Level: intermediate 1713 1714 Note: 1715 This routine is a preferred replacement to PetscMemcmp() 1716 The arrays must be of the same type 1717 1718 .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), 1719 PetscArraymove() 1720 M*/ 1721 #define PetscArraycmp(str1,str2,cnt,e) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcmp(str1,str2,(size_t)(cnt)*sizeof(*(str1)),e)) 1722 1723 /*MC 1724 PetscArraymove - Copies from one array in memory to another, the arrays may overlap. Use PetscArraycpy() when the arrays 1725 do not overlap 1726 1727 Synopsis: 1728 #include <petscsys.h> 1729 PetscErrorCode PetscArraymove(anytype *str1,const anytype *str2,size_t cnt) 1730 1731 Not Collective 1732 1733 Input Parameters: 1734 + str1 - First array 1735 . str2 - Second array 1736 - cnt - Count of the array, not in bytes, but number of entries in the arrays 1737 1738 Level: intermediate 1739 1740 Note: 1741 This routine is a preferred replacement to PetscMemmove() 1742 The arrays must be of the same type 1743 1744 .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraycpy(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1745 M*/ 1746 #define PetscArraymove(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemmove(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1747 1748 /*MC 1749 PetscArraycpy - Copies from one array in memory to another 1750 1751 Synopsis: 1752 #include <petscsys.h> 1753 PetscErrorCode PetscArraycpy(anytype *str1,const anytype *str2,size_t cnt) 1754 1755 Not Collective 1756 1757 Input Parameters: 1758 + str1 - First array (destination) 1759 . str2 - Second array (source) 1760 - cnt - Count of the array, not in bytes, but number of entries in the arrays 1761 1762 Level: intermediate 1763 1764 Note: 1765 This routine is a preferred replacement to PetscMemcpy() 1766 The arrays must be of the same type 1767 1768 .seealso: PetscMemcpy(), PetscMemcmp(), PetscArrayzero(), PetscMemzero(), PetscArraymove(), PetscMemmove(), PetscArraycmp(), PetscStrallocpy() 1769 M*/ 1770 #define PetscArraycpy(str1,str2,cnt) ((sizeof(*(str1)) != sizeof(*(str2))) || PetscMemcpy(str1,str2,(size_t)(cnt)*sizeof(*(str1)))) 1771 1772 /*MC 1773 PetscArrayzero - Zeros an array in memory. 1774 1775 Synopsis: 1776 #include <petscsys.h> 1777 PetscErrorCode PetscArrayzero(anytype *str1,size_t cnt) 1778 1779 Not Collective 1780 1781 Input Parameters: 1782 + str1 - array 1783 - cnt - Count of the array, not in bytes, but number of entries in the array 1784 1785 Level: intermediate 1786 1787 Note: 1788 This routine is a preferred replacement to PetscMemzero() 1789 1790 .seealso: PetscMemcpy(), PetscMemcmp(), PetscMemzero(), PetscArraycmp(), PetscArraycpy(), PetscMemmove(), PetscStrallocpy(), PetscArraymove() 1791 M*/ 1792 #define PetscArrayzero(str1,cnt) PetscMemzero(str1,(size_t)(cnt)*sizeof(*(str1))) 1793 1794 /*MC 1795 PetscPrefetchBlock - Prefetches a block of memory 1796 1797 Synopsis: 1798 #include <petscsys.h> 1799 void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t) 1800 1801 Not Collective 1802 1803 Input Parameters: 1804 + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar) 1805 . n - number of elements to fetch 1806 . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors) 1807 - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note 1808 1809 Level: developer 1810 1811 Notes: 1812 The last two arguments (rw and t) must be compile-time constants. 1813 1814 Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer 1815 equivalent locality hints, but the following macros are always defined to their closest analogue. 1816 + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched). 1817 . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1. 1818 . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1). 1819 - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.) 1820 1821 This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid 1822 address). 1823 1824 M*/ 1825 #define PetscPrefetchBlock(a,n,rw,t) do { \ 1826 const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \ 1827 for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \ 1828 } while (0) 1829 1830 /* 1831 Determine if some of the kernel computation routines use 1832 Fortran (rather than C) for the numerical calculations. On some machines 1833 and compilers (like complex numbers) the Fortran version of the routines 1834 is faster than the C/C++ versions. The flag --with-fortran-kernels 1835 should be used with ./configure to turn these on. 1836 */ 1837 #if defined(PETSC_USE_FORTRAN_KERNELS) 1838 1839 #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL) 1840 #define PETSC_USE_FORTRAN_KERNEL_MULTCRL 1841 #endif 1842 1843 #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM) 1844 #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM 1845 #endif 1846 1847 #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ) 1848 #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ 1849 #endif 1850 1851 #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ) 1852 #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ 1853 #endif 1854 1855 #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM) 1856 #define PETSC_USE_FORTRAN_KERNEL_NORM 1857 #endif 1858 1859 #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY) 1860 #define PETSC_USE_FORTRAN_KERNEL_MAXPY 1861 #endif 1862 1863 #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ) 1864 #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ 1865 #endif 1866 1867 #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ) 1868 #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ 1869 #endif 1870 1871 #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ) 1872 #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ 1873 #endif 1874 1875 #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ) 1876 #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ 1877 #endif 1878 1879 #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT) 1880 #define PETSC_USE_FORTRAN_KERNEL_MDOT 1881 #endif 1882 1883 #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY) 1884 #define PETSC_USE_FORTRAN_KERNEL_XTIMESY 1885 #endif 1886 1887 #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX) 1888 #define PETSC_USE_FORTRAN_KERNEL_AYPX 1889 #endif 1890 1891 #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY) 1892 #define PETSC_USE_FORTRAN_KERNEL_WAXPY 1893 #endif 1894 1895 #endif 1896 1897 /* 1898 Macros for indicating code that should be compiled with a C interface, 1899 rather than a C++ interface. Any routines that are dynamically loaded 1900 (such as the PCCreate_XXX() routines) must be wrapped so that the name 1901 mangler does not change the functions symbol name. This just hides the 1902 ugly extern "C" {} wrappers. 1903 */ 1904 #if defined(__cplusplus) 1905 # define EXTERN_C_BEGIN extern "C" { 1906 # define EXTERN_C_END } 1907 #else 1908 # define EXTERN_C_BEGIN 1909 # define EXTERN_C_END 1910 #endif 1911 1912 /* --------------------------------------------------------------------*/ 1913 1914 /*MC 1915 MPI_Comm - the basic object used by MPI to determine which processes are involved in a 1916 communication 1917 1918 Level: beginner 1919 1920 Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm 1921 1922 .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF 1923 M*/ 1924 1925 #if defined(PETSC_HAVE_MPIIO) 1926 PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1927 PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*); 1928 #endif 1929 1930 /* the following petsc_static_inline require petscerror.h */ 1931 1932 /* Limit MPI to 32-bits */ 1933 #define PETSC_MPI_INT_MAX 2147483647 1934 #define PETSC_MPI_INT_MIN -2147483647 1935 /* Limit BLAS to 32-bits */ 1936 #define PETSC_BLAS_INT_MAX 2147483647 1937 #define PETSC_BLAS_INT_MIN -2147483647 1938 1939 /*@C 1940 PetscIntCast - casts a PetscInt64 (which is 64 bits in size) to a PetscInt (which may be 32 bits in size), generates an 1941 error if the PetscInt is not large enough to hold the number. 1942 1943 Not Collective 1944 1945 Input Parameter: 1946 . a - the PetscInt64 value 1947 1948 Output Parameter: 1949 . b - the resulting PetscInt value 1950 1951 Level: advanced 1952 1953 Notes: If integers needed for the applications are too large to fit in 32 bit ints you can ./configure using --with-64-bit-indices to make PetscInt use 64 bit ints 1954 1955 Not available from Fortran 1956 1957 .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscBLASIntCast() 1958 @*/ 1959 PETSC_STATIC_INLINE PetscErrorCode PetscIntCast(PetscInt64 a,PetscInt *b) 1960 { 1961 PetscFunctionBegin; 1962 #if !defined(PETSC_USE_64BIT_INDICES) 1963 if ((a) > PETSC_MAX_INT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Integer too long for PetscInt, you may need to ./configure using --with-64-bit-indices"); 1964 #endif 1965 *b = (PetscInt)(a); 1966 PetscFunctionReturn(0); 1967 } 1968 1969 /*@C 1970 PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an 1971 error if the PetscBLASInt is not large enough to hold the number. 1972 1973 Not Collective 1974 1975 Input Parameter: 1976 . a - the PetscInt value 1977 1978 Output Parameter: 1979 . b - the resulting PetscBLASInt value 1980 1981 Level: advanced 1982 1983 Not available from Fortran 1984 1985 .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast(), PetscIntCast() 1986 @*/ 1987 PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b) 1988 { 1989 PetscFunctionBegin; 1990 #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES) 1991 *b = 0; 1992 if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK"); 1993 #endif 1994 *b = (PetscBLASInt)(a); 1995 PetscFunctionReturn(0); 1996 } 1997 1998 /*@C 1999 PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an 2000 error if the PetscMPIInt is not large enough to hold the number. 2001 2002 Not Collective 2003 2004 Input Parameter: 2005 . a - the PetscInt value 2006 2007 Output Parameter: 2008 . b - the resulting PetscMPIInt value 2009 2010 Level: advanced 2011 2012 Not available from Fortran 2013 2014 .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntCast() 2015 @*/ 2016 PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b) 2017 { 2018 PetscFunctionBegin; 2019 #if defined(PETSC_USE_64BIT_INDICES) 2020 *b = 0; 2021 if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI"); 2022 #endif 2023 *b = (PetscMPIInt)(a); 2024 PetscFunctionReturn(0); 2025 } 2026 2027 #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b)) 2028 2029 /*@C 2030 2031 PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value 2032 2033 Not Collective 2034 2035 Input Parameter: 2036 + a - the PetscReal value 2037 - b - the second value 2038 2039 Returns: 2040 the result as a PetscInt value 2041 2042 Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2043 Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt 2044 Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2045 2046 Developers Note: 2047 We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 2048 2049 This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2050 2051 Not available from Fortran 2052 2053 Level: advanced 2054 2055 .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2056 @*/ 2057 PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b) 2058 { 2059 PetscInt64 r; 2060 2061 r = (PetscInt64) (a*(PetscReal)b); 2062 if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2063 return (PetscInt) r; 2064 } 2065 2066 /*@C 2067 2068 PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2069 2070 Not Collective 2071 2072 Input Parameter: 2073 + a - the PetscInt value 2074 - b - the second value 2075 2076 Returns: 2077 the result as a PetscInt value 2078 2079 Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2080 Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2081 Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2082 2083 Not available from Fortran 2084 2085 Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks. 2086 2087 This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2088 2089 Level: advanced 2090 2091 .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2092 @*/ 2093 PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b) 2094 { 2095 PetscInt64 r; 2096 2097 r = PetscInt64Mult(a,b); 2098 if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2099 return (PetscInt) r; 2100 } 2101 2102 /*@C 2103 2104 PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value 2105 2106 Not Collective 2107 2108 Input Parameter: 2109 + a - the PetscInt value 2110 - b - the second value 2111 2112 Returns: 2113 the result as a PetscInt value 2114 2115 Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64 2116 Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt 2117 Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt 2118 2119 This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able. 2120 2121 Not available from Fortran 2122 2123 Level: advanced 2124 2125 .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2126 @*/ 2127 PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b) 2128 { 2129 PetscInt64 r; 2130 2131 r = ((PetscInt64)a) + ((PetscInt64)b); 2132 if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100; 2133 return (PetscInt) r; 2134 } 2135 2136 /*@C 2137 2138 PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow. 2139 2140 Not Collective 2141 2142 Input Parameter: 2143 + a - the PetscInt value 2144 - b - the second value 2145 2146 Output Parameter:ma 2147 . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2148 2149 Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2150 Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2151 2152 Not available from Fortran 2153 2154 Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks. 2155 2156 Level: advanced 2157 2158 .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError() 2159 @*/ 2160 PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result) 2161 { 2162 PetscInt64 r; 2163 2164 PetscFunctionBegin; 2165 r = PetscInt64Mult(a,b); 2166 #if !defined(PETSC_USE_64BIT_INDICES) 2167 if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2168 #endif 2169 if (result) *result = (PetscInt) r; 2170 PetscFunctionReturn(0); 2171 } 2172 2173 /*@C 2174 2175 PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow. 2176 2177 Not Collective 2178 2179 Input Parameter: 2180 + a - the PetscInt value 2181 - b - the second value 2182 2183 Output Parameter:ma 2184 . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows 2185 2186 Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64 2187 Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt 2188 2189 Not available from Fortran 2190 2191 Level: advanced 2192 2193 .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult() 2194 @*/ 2195 PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result) 2196 { 2197 PetscInt64 r; 2198 2199 PetscFunctionBegin; 2200 r = ((PetscInt64)a) + ((PetscInt64)b); 2201 #if !defined(PETSC_USE_64BIT_INDICES) 2202 if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b); 2203 #endif 2204 if (result) *result = (PetscInt) r; 2205 PetscFunctionReturn(0); 2206 } 2207 2208 /* 2209 The IBM include files define hz, here we hide it so that it may be used as a regular user variable. 2210 */ 2211 #if defined(hz) 2212 # undef hz 2213 #endif 2214 2215 #include <limits.h> 2216 2217 /* The number of bits in a byte */ 2218 2219 #define PETSC_BITS_PER_BYTE CHAR_BIT 2220 2221 /* For arrays that contain filenames or paths */ 2222 2223 #if defined(PETSC_HAVE_SYS_PARAM_H) 2224 # include <sys/param.h> 2225 #endif 2226 #if defined(PETSC_HAVE_SYS_TYPES_H) 2227 # include <sys/types.h> 2228 #endif 2229 #if defined(MAXPATHLEN) 2230 # define PETSC_MAX_PATH_LEN MAXPATHLEN 2231 #elif defined(MAX_PATH) 2232 # define PETSC_MAX_PATH_LEN MAX_PATH 2233 #elif defined(_MAX_PATH) 2234 # define PETSC_MAX_PATH_LEN _MAX_PATH 2235 #else 2236 # define PETSC_MAX_PATH_LEN 4096 2237 #endif 2238 2239 /*MC 2240 2241 PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++ 2242 and Fortran compilers when petscsys.h is included. 2243 2244 2245 The current PETSc version and the API for accessing it are defined in petscversion.h 2246 2247 The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z) 2248 2249 A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention 2250 where only a change in the major version number (x) indicates a change in the API. 2251 2252 A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w 2253 2254 Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z), 2255 PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given 2256 version number (x.y.z). 2257 2258 PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases) 2259 2260 PETSC_VERSION_DATE is the date the x.y.z version was released 2261 2262 PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww 2263 2264 PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository 2265 2266 Level: intermediate 2267 2268 PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0 2269 2270 M*/ 2271 2272 /*MC 2273 2274 UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning 2275 of every function and module definition you need something like 2276 2277 $ 2278 $#include "petsc/finclude/petscXXX.h" 2279 $ use petscXXX 2280 2281 You can declare PETSc variables using either of the following. 2282 2283 $ XXX variablename 2284 $ type(tXXX) variablename 2285 2286 For example, 2287 2288 $#include "petsc/finclude/petscvec.h" 2289 $ use petscvec 2290 $ 2291 $ Vec b 2292 $ type(tVec) x 2293 2294 Level: beginner 2295 2296 M*/ 2297 2298 PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t); 2299 PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t); 2300 PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t); 2301 PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t); 2302 PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]); 2303 PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t); 2304 PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t); 2305 PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*); 2306 2307 PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]); 2308 PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]); 2309 PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]); 2310 PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*); 2311 PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*); 2312 PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]); 2313 PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]); 2314 PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]); 2315 PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]); 2316 PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]); 2317 PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]); 2318 PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]); 2319 PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithIntArray(PetscMPIInt,PetscMPIInt[],PetscInt[]); 2320 PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]); 2321 PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*); 2322 PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]); 2323 PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]); 2324 PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]); 2325 PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]); 2326 PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*); 2327 PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]); 2328 PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]); 2329 PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**); 2330 PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**); 2331 PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**); 2332 PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**); 2333 2334 PETSC_EXTERN PetscErrorCode PetscSetDisplay(void); 2335 PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t); 2336 2337 /*J 2338 PetscRandomType - String with the name of a PETSc randomizer 2339 2340 Level: beginner 2341 2342 Notes: 2343 To use SPRNG or RANDOM123 you must have ./configure PETSc 2344 with the option --download-sprng or --download-random123 2345 2346 .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate() 2347 J*/ 2348 typedef const char* PetscRandomType; 2349 #define PETSCRAND "rand" 2350 #define PETSCRAND48 "rand48" 2351 #define PETSCSPRNG "sprng" 2352 #define PETSCRANDER48 "rander48" 2353 #define PETSCRANDOM123 "random123" 2354 2355 /* Logging support */ 2356 PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID; 2357 2358 PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void); 2359 2360 /* Dynamic creation and loading functions */ 2361 PETSC_EXTERN PetscFunctionList PetscRandomList; 2362 2363 PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom)); 2364 PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType); 2365 PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom); 2366 PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*); 2367 PETSC_STATIC_INLINE PetscErrorCode PetscRandomViewFromOptions(PetscRandom A,PetscObject obj,const char name[]) {return PetscObjectViewFromOptions((PetscObject)A,obj,name);} 2368 PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer); 2369 2370 PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*); 2371 PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*); 2372 PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*); 2373 PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*); 2374 PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar); 2375 PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long); 2376 PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *); 2377 PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom); 2378 PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*); 2379 2380 PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t); 2381 PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t); 2382 PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t); 2383 PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]); 2384 PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t); 2385 PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *); 2386 PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *); 2387 PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]); 2388 PETSC_EXTERN PetscErrorCode PetscMkdtemp(char[]); 2389 PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]); 2390 2391 PETSC_STATIC_INLINE PetscBool PetscBinaryBigEndian(void) {long _petsc_v = 1; return ((char*)&_petsc_v)[0] ? PETSC_FALSE : PETSC_TRUE;} 2392 2393 PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscInt*,PetscDataType); 2394 PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscInt*,PetscDataType); 2395 PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool); 2396 PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool); 2397 PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *); 2398 PETSC_EXTERN PetscErrorCode PetscBinaryClose(int); 2399 PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *); 2400 PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *); 2401 PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t); 2402 PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *); 2403 PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *); 2404 #if defined(PETSC_USE_SOCKET_VIEWER) 2405 PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*); 2406 #endif 2407 2408 PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*); 2409 PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*); 2410 PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt); 2411 2412 PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]); 2413 PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool ); 2414 PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void); 2415 PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*); 2416 PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void); 2417 PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void); 2418 2419 PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*); 2420 PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**); 2421 PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**); 2422 PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**); 2423 PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**); 2424 PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*) 2425 PetscAttrMPIPointerWithType(6,3); 2426 PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2427 PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2428 PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2429 PetscAttrMPIPointerWithType(6,3); 2430 PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt, 2431 MPI_Request**,MPI_Request**, 2432 PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*), 2433 PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx) 2434 PetscAttrMPIPointerWithType(6,3); 2435 2436 PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[]; 2437 PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType); 2438 PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*); 2439 2440 PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool*,PetscBool*); 2441 2442 PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject); 2443 2444 PETSC_EXTERN const char *const PetscSubcommTypes[]; 2445 2446 struct _n_PetscSubcomm { 2447 MPI_Comm parent; /* parent communicator */ 2448 MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */ 2449 MPI_Comm child; /* the sub-communicator */ 2450 PetscMPIInt n; /* num of subcommunicators under the parent communicator */ 2451 PetscMPIInt color; /* color of processors belong to this communicator */ 2452 PetscMPIInt *subsize; /* size of subcommunicator[color] */ 2453 PetscSubcommType type; 2454 char *subcommprefix; 2455 }; 2456 2457 PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;} 2458 PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;} 2459 PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;} 2460 PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*); 2461 PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*); 2462 PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt); 2463 PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType); 2464 PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt); 2465 PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer); 2466 PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm); 2467 PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]); 2468 2469 PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*); 2470 PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt); 2471 PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*); 2472 PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*); 2473 PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt); 2474 PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap); 2475 PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*); 2476 PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer); 2477 2478 PETSC_EXTERN PetscErrorCode PetscProcessPlacementView(PetscViewer); 2479 PETSC_EXTERN PetscErrorCode PetscShmCommGet(MPI_Comm,PetscShmComm*); 2480 PETSC_EXTERN PetscErrorCode PetscShmCommGlobalToLocal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 2481 PETSC_EXTERN PetscErrorCode PetscShmCommLocalToGlobal(PetscShmComm,PetscMPIInt,PetscMPIInt*); 2482 PETSC_EXTERN PetscErrorCode PetscShmCommGetMpiShmComm(PetscShmComm,MPI_Comm*); 2483 2484 /* routines to better support OpenMP multithreading needs of some PETSc third party libraries */ 2485 PETSC_EXTERN PetscErrorCode PetscOmpCtrlCreate(MPI_Comm,PetscInt,PetscOmpCtrl*); 2486 PETSC_EXTERN PetscErrorCode PetscOmpCtrlGetOmpComms(PetscOmpCtrl,MPI_Comm*,MPI_Comm*,PetscBool*); 2487 PETSC_EXTERN PetscErrorCode PetscOmpCtrlDestroy(PetscOmpCtrl*); 2488 PETSC_EXTERN PetscErrorCode PetscOmpCtrlBarrier(PetscOmpCtrl); 2489 PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterBegin(PetscOmpCtrl); 2490 PETSC_EXTERN PetscErrorCode PetscOmpCtrlOmpRegionOnMasterEnd(PetscOmpCtrl); 2491 2492 PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*); 2493 PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*); 2494 PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*); 2495 PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*); 2496 PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*); 2497 PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*); 2498 PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*); 2499 PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t); 2500 2501 2502 /* Type-safe wrapper to encourage use of PETSC_RESTRICT. Does not use PetscFunctionBegin because the error handling 2503 * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as 2504 * possible. */ 2505 PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,size_t count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);} 2506 2507 extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton; 2508 PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*); 2509 PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*); 2510 PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*); 2511 2512 #include <stdarg.h> 2513 PETSC_EXTERN PetscErrorCode PetscVSNPrintf(char*,size_t,const char[],size_t*,va_list); 2514 PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list); 2515 2516 PETSC_EXTERN PetscSegBuffer PetscCitationsList; 2517 2518 /*@C 2519 PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code. 2520 2521 Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed 2522 2523 Input Parameters: 2524 + cite - the bibtex item, formated to displayed on multiple lines nicely 2525 - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation 2526 2527 Level: intermediate 2528 2529 Not available from Fortran 2530 2531 Options Database: 2532 . -citations [filename] - print out the bibtex entries for the given computation 2533 @*/ 2534 PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set) 2535 { 2536 size_t len; 2537 char *vstring; 2538 PetscErrorCode ierr; 2539 2540 PetscFunctionBegin; 2541 if (set && *set) PetscFunctionReturn(0); 2542 ierr = PetscStrlen(cit,&len);CHKERRQ(ierr); 2543 ierr = PetscSegBufferGet(PetscCitationsList,len,&vstring);CHKERRQ(ierr); 2544 ierr = PetscArraycpy(vstring,cit,len);CHKERRQ(ierr); 2545 if (set) *set = PETSC_TRUE; 2546 PetscFunctionReturn(0); 2547 } 2548 2549 PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t); 2550 PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t); 2551 PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t); 2552 PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []); 2553 2554 PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t); 2555 PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t); 2556 2557 PETSC_EXTERN PetscErrorCode PetscGlobusGetTransfers(MPI_Comm,const char[],char[],size_t); 2558 2559 PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*); 2560 PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*); 2561 2562 PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*); 2563 PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t); 2564 2565 2566 #if defined(PETSC_USE_DEBUG) 2567 /* 2568 Verify that all processes in the communicator have called this from the same line of code 2569 */ 2570 PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *); 2571 2572 /*MC 2573 MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the 2574 same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths 2575 resulting in inconsistent and incorrect calls to MPI_Allreduce(). 2576 2577 Collective 2578 2579 Synopsis: 2580 #include <petscsys.h> 2581 PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); 2582 2583 Input Parameters: 2584 + indata - pointer to the input data to be reduced 2585 . count - the number of MPI data items in indata and outdata 2586 . datatype - the MPI datatype, for example MPI_INT 2587 . op - the MPI operation, for example MPI_SUM 2588 - comm - the MPI communicator on which the operation occurs 2589 2590 Output Parameter: 2591 . outdata - the reduced values 2592 2593 Notes: 2594 In optimized mode this directly calls MPI_Allreduce() 2595 2596 Level: developer 2597 2598 .seealso: MPI_Allreduce() 2599 M*/ 2600 #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm)) 2601 #else 2602 #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm) 2603 #endif 2604 2605 #if defined(PETSC_HAVE_MPI_WIN_CREATE_FEATURE) 2606 PETSC_EXTERN PetscErrorCode MPIU_Win_allocate_shared(MPI_Aint,PetscMPIInt,MPI_Info,MPI_Comm,void*,MPI_Win*); 2607 PETSC_EXTERN PetscErrorCode MPIU_Win_shared_query(MPI_Win,PetscMPIInt,MPI_Aint*,PetscMPIInt*,void*); 2608 #endif 2609 2610 /* 2611 Returned from PETSc functions that are called from MPI, such as related to attributes 2612 */ 2613 PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CLASS; 2614 PETSC_EXTERN PetscMPIInt PETSC_MPI_ERROR_CODE; 2615 2616 #endif 2617