12eac72dbSBarry Smith /* 237f753daSBarry Smith Defines the vector component of PETSc. Vectors generally represent 337f753daSBarry Smith degrees of freedom for finite element/finite difference functions 484cb2905SBarry Smith on a grid. They have more mathematical structure then simple arrays. 52eac72dbSBarry Smith */ 62eac72dbSBarry Smith 70a835dfdSSatish Balay #ifndef __PETSCVEC_H 80a835dfdSSatish Balay #define __PETSCVEC_H 92c8e378dSBarry Smith #include <petscis.h> 105f5f199fSBarry Smith 112eac72dbSBarry Smith 1209321671SBarry Smith /*S 1309321671SBarry Smith Vec - Abstract PETSc vector object 1409321671SBarry Smith 1509321671SBarry Smith Level: beginner 1609321671SBarry Smith 1709321671SBarry Smith Concepts: field variables, unknowns, arrays 1809321671SBarry Smith 1909321671SBarry Smith .seealso: VecCreate(), VecType, VecSetType() 2009321671SBarry Smith S*/ 21f09e8eb9SSatish Balay typedef struct _p_Vec* Vec; 2209321671SBarry Smith 2309321671SBarry Smith /*S 2409321671SBarry Smith VecScatter - Object used to manage communication of data 2509321671SBarry Smith between vectors in parallel. Manages both scatters and gathers 2609321671SBarry Smith 2709321671SBarry Smith Level: beginner 2809321671SBarry Smith 2909321671SBarry Smith Concepts: scatter 3009321671SBarry Smith 3109321671SBarry Smith .seealso: VecScatterCreate(), VecScatterBegin(), VecScatterEnd() 3209321671SBarry Smith S*/ 33f09e8eb9SSatish Balay typedef struct _p_VecScatter* VecScatter; 3409321671SBarry Smith 3509321671SBarry Smith /*E 36398c84b2SBarry Smith ScatterMode - Determines the direction of a scatter 37398c84b2SBarry Smith 38398c84b2SBarry Smith Level: beginner 39398c84b2SBarry Smith 40398c84b2SBarry Smith .seealso: VecScatter, VecScatterBegin(), VecScatterEnd() 41398c84b2SBarry Smith E*/ 42398c84b2SBarry Smith typedef enum {SCATTER_FORWARD=0, SCATTER_REVERSE=1, SCATTER_FORWARD_LOCAL=2, SCATTER_REVERSE_LOCAL=3, SCATTER_LOCAL=2} ScatterMode; 43398c84b2SBarry Smith 44398c84b2SBarry Smith /*MC 45398c84b2SBarry Smith SCATTER_FORWARD - Scatters the values as dictated by the VecScatterCreate() call 46398c84b2SBarry Smith 47398c84b2SBarry Smith Level: beginner 48398c84b2SBarry Smith 49398c84b2SBarry Smith .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_REVERSE, SCATTER_FORWARD_LOCAL, 50398c84b2SBarry Smith SCATTER_REVERSE_LOCAL 51398c84b2SBarry Smith 52398c84b2SBarry Smith M*/ 53398c84b2SBarry Smith 54398c84b2SBarry Smith /*MC 55398c84b2SBarry Smith SCATTER_REVERSE - Moves the values in the opposite direction then the directions indicated in 56398c84b2SBarry Smith in the VecScatterCreate() 57398c84b2SBarry Smith 58398c84b2SBarry Smith Level: beginner 59398c84b2SBarry Smith 60398c84b2SBarry Smith .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_FORWARD, SCATTER_FORWARD_LOCAL, 61398c84b2SBarry Smith SCATTER_REVERSE_LOCAL 62398c84b2SBarry Smith 63398c84b2SBarry Smith M*/ 64398c84b2SBarry Smith 65398c84b2SBarry Smith /*MC 66398c84b2SBarry Smith SCATTER_FORWARD_LOCAL - Scatters the values as dictated by the VecScatterCreate() call except NO parallel communication 67398c84b2SBarry Smith is done. Any variables that have be moved between processes are ignored 68398c84b2SBarry Smith 69398c84b2SBarry Smith Level: developer 70398c84b2SBarry Smith 71398c84b2SBarry Smith .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_REVERSE, SCATTER_FORWARD, 72398c84b2SBarry Smith SCATTER_REVERSE_LOCAL 73398c84b2SBarry Smith 74398c84b2SBarry Smith M*/ 75398c84b2SBarry Smith 76398c84b2SBarry Smith /*MC 77398c84b2SBarry Smith SCATTER_REVERSE_LOCAL - Moves the values in the opposite direction then the directions indicated in 78398c84b2SBarry Smith in the VecScatterCreate() except NO parallel communication 79398c84b2SBarry Smith is done. Any variables that have be moved between processes are ignored 80398c84b2SBarry Smith 81398c84b2SBarry Smith Level: developer 82398c84b2SBarry Smith 83398c84b2SBarry Smith .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_FORWARD, SCATTER_FORWARD_LOCAL, 84398c84b2SBarry Smith SCATTER_REVERSE 85398c84b2SBarry Smith 86398c84b2SBarry Smith M*/ 87398c84b2SBarry Smith 8876bdecfbSBarry Smith /*J 8909321671SBarry Smith VecType - String with the name of a PETSc vector or the creation function 9009321671SBarry Smith with an optional dynamic library name, for example 9109321671SBarry Smith http://www.mcs.anl.gov/petsc/lib.a:myveccreate() 9209321671SBarry Smith 9309321671SBarry Smith Level: beginner 9409321671SBarry Smith 9509321671SBarry Smith .seealso: VecSetType(), Vec 9676bdecfbSBarry Smith J*/ 9719fd82e9SBarry Smith typedef const char* VecType; 980676abe4SMatthew Knepley #define VECSEQ "seq" 990676abe4SMatthew Knepley #define VECMPI "mpi" 100f48c50deSBarry Smith #define VECSTANDARD "standard" /* seq on one process and mpi on several */ 1010676abe4SMatthew Knepley #define VECSHARED "shared" 102765467adSMatthew Knepley #define VECSIEVE "sieve" 1038154be41SBarry Smith #define VECSEQCUSP "seqcusp" 1048154be41SBarry Smith #define VECMPICUSP "mpicusp" 1058154be41SBarry Smith #define VECCUSP "cusp" /* seqcusp on one process and mpicusp on several */ 1061aae2881SJed Brown #define VECNEST "nest" 1071bf2b38bSKerry Stevens #define VECSEQPTHREAD "seqpthread" 1084b71561bSShri Abhyankar #define VECMPIPTHREAD "mpipthread" 109bf2c1783SBarry Smith #define VECPTHREAD "pthread" /* seqpthread on one process and mpipthread on several */ 1102eac72dbSBarry Smith 1114b71561bSShri Abhyankar 112fd487807SMatthew Knepley /* Logging support */ 1130700a824SBarry Smith #define VEC_FILE_CLASSID 1211214 114014dd563SJed Brown PETSC_EXTERN PetscClassId VEC_CLASSID; 115014dd563SJed Brown PETSC_EXTERN PetscClassId VEC_SCATTER_CLASSID; 1168ba1e511SMatthew Knepley 11745b63f25SDmitry Karpeev 118014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecInitializePackage(const char[]); 119014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecFinalizePackage(void); 120fd487807SMatthew Knepley 121014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreate(MPI_Comm,Vec*); 122014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateSeq(MPI_Comm,PetscInt,Vec*); 123014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateMPI(MPI_Comm,PetscInt,PetscInt,Vec*); 124014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateSeqWithArray(MPI_Comm,PetscInt,PetscInt,const PetscScalar[],Vec*); 125014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateMPIWithArray(MPI_Comm,PetscInt,PetscInt,PetscInt,const PetscScalar[],Vec*); 126014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateShared(MPI_Comm,PetscInt,PetscInt,Vec*); 127014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetFromOptions(Vec); 128*0d2bece7SBarry Smith PETSC_EXTERN PetscErrorCode VecViewFromOptions(Vec,const char[]); 129*0d2bece7SBarry Smith 130014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetUp(Vec); 131014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecDestroy(Vec*); 132014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecZeroEntries(Vec); 133014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetOptionsPrefix(Vec,const char[]); 134014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAppendOptionsPrefix(Vec,const char[]); 135014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetOptionsPrefix(Vec,const char*[]); 136f69a0ea3SMatthew Knepley 137014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetSizes(Vec,PetscInt,PetscInt); 138fd487807SMatthew Knepley 139014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecDotNorm2(Vec,Vec,PetscScalar*,PetscScalar*); 140014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecDot(Vec,Vec,PetscScalar*); 141014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecTDot(Vec,Vec,PetscScalar*); 142014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMDot(Vec,PetscInt,const Vec[],PetscScalar[]); 143014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMTDot(Vec,PetscInt,const Vec[],PetscScalar[]); 144014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetSubVector(Vec,IS,Vec*); 145014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecRestoreSubVector(Vec,IS,Vec*); 146cddf8d76SBarry Smith 14709321671SBarry Smith /*E 14809321671SBarry Smith NormType - determines what type of norm to compute 14909321671SBarry Smith 15009321671SBarry Smith Level: beginner 15109321671SBarry Smith 15209321671SBarry Smith .seealso: VecNorm(), VecNormBegin(), VecNormEnd(), MatNorm() 15309321671SBarry Smith E*/ 1549dcbbd2bSBarry Smith typedef enum {NORM_1=0,NORM_2=1,NORM_FROBENIUS=2,NORM_INFINITY=3,NORM_1_AND_2=4} NormType; 1556a6fc655SJed Brown PETSC_EXTERN const char *const NormTypes[]; 156cddf8d76SBarry Smith #define NORM_MAX NORM_INFINITY 15709321671SBarry Smith 1589b250c83SBarry Smith /*MC 1599b250c83SBarry Smith NORM_1 - the one norm, ||v|| = sum_i | v_i |. ||A|| = max_j || v_*j ||, maximum column sum 1609b250c83SBarry Smith 1619b250c83SBarry Smith Level: beginner 1629b250c83SBarry Smith 1639b250c83SBarry Smith .seealso: NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_2, NORM_FROBENIUS, 1649b250c83SBarry Smith NORM_INFINITY, NORM_1_AND_2 1659b250c83SBarry Smith 1669b250c83SBarry Smith M*/ 1679b250c83SBarry Smith 1689b250c83SBarry Smith /*MC 1699b250c83SBarry Smith NORM_2 - the two norm, ||v|| = sqrt(sum_i (v_i)^2) (vectors only) 1709b250c83SBarry Smith 1719b250c83SBarry Smith Level: beginner 1729b250c83SBarry Smith 1739b250c83SBarry Smith .seealso: NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_FROBENIUS, 1749b250c83SBarry Smith NORM_INFINITY, NORM_1_AND_2 1759b250c83SBarry Smith 1769b250c83SBarry Smith M*/ 1779b250c83SBarry Smith 1789b250c83SBarry Smith /*MC 1799b250c83SBarry Smith NORM_FROBENIUS - ||A|| = sqrt(sum_ij (A_ij)^2), same as NORM_2 for vectors 1809b250c83SBarry Smith 1819b250c83SBarry Smith Level: beginner 1829b250c83SBarry Smith 1839b250c83SBarry Smith .seealso: NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_2, 1849b250c83SBarry Smith NORM_INFINITY, NORM_1_AND_2 1859b250c83SBarry Smith 1869b250c83SBarry Smith M*/ 1879b250c83SBarry Smith 1889b250c83SBarry Smith /*MC 1899b250c83SBarry Smith NORM_INFINITY - ||v|| = max_i |v_i|. ||A|| = max_i || v_i* ||, maximum row sum 1909b250c83SBarry Smith 1919b250c83SBarry Smith Level: beginner 1929b250c83SBarry Smith 1939b250c83SBarry Smith .seealso: NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_2, 1949b250c83SBarry Smith NORM_FROBINIUS, NORM_1_AND_2 1959b250c83SBarry Smith 1969b250c83SBarry Smith M*/ 1979b250c83SBarry Smith 1989b250c83SBarry Smith /*MC 1999b250c83SBarry Smith NORM_1_AND_2 - computes both the 1 and 2 norm of a vector 2009b250c83SBarry Smith 2019b250c83SBarry Smith Level: beginner 2029b250c83SBarry Smith 2039b250c83SBarry Smith .seealso: NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_2, 2049b250c83SBarry Smith NORM_FROBINIUS, NORM_INFINITY 2059b250c83SBarry Smith 2069b250c83SBarry Smith M*/ 2079b250c83SBarry Smith 2089b250c83SBarry Smith /*MC 2099b250c83SBarry Smith NORM_MAX - see NORM_INFINITY 2109b250c83SBarry Smith 211d41222bbSBarry Smith Level: beginner 212d41222bbSBarry Smith 2139b250c83SBarry Smith M*/ 2149b250c83SBarry Smith 215014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNorm(Vec,NormType,PetscReal *); 216014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNormAvailable(Vec,NormType,PetscBool *,PetscReal *); 217014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNormalize(Vec,PetscReal *); 218014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSum(Vec,PetscScalar*); 219014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMax(Vec,PetscInt*,PetscReal *); 220014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMin(Vec,PetscInt*,PetscReal *); 221014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScale(Vec,PetscScalar); 222014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCopy(Vec,Vec); 223014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetRandom(Vec,PetscRandom); 224014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSet(Vec,PetscScalar); 225014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSwap(Vec,Vec); 226014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAXPY(Vec,PetscScalar,Vec); 227014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAXPBY(Vec,PetscScalar,PetscScalar,Vec); 228014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMAXPY(Vec,PetscInt,const PetscScalar[],Vec[]); 229014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAYPX(Vec,PetscScalar,Vec); 230014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecWAXPY(Vec,PetscScalar,Vec,Vec); 231014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAXPBYPCZ(Vec,PetscScalar,PetscScalar,PetscScalar,Vec,Vec); 232014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecPointwiseMax(Vec,Vec,Vec); 233014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecPointwiseMaxAbs(Vec,Vec,Vec); 234014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecPointwiseMin(Vec,Vec,Vec); 235014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecPointwiseMult(Vec,Vec,Vec); 236014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecPointwiseDivide(Vec,Vec,Vec); 237014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMaxPointwiseDivide(Vec,Vec,PetscReal*); 238014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecShift(Vec,PetscScalar); 239014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecReciprocal(Vec); 240014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecPermute(Vec, IS, PetscBool ); 241014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSqrtAbs(Vec); 242014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecLog(Vec); 243014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecExp(Vec); 244014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAbs(Vec); 245014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecDuplicate(Vec,Vec*); 246014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecDuplicateVecs(Vec,PetscInt,Vec*[]); 247014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecDestroyVecs(PetscInt, Vec*[]); 248014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideNormAll(Vec,NormType,PetscReal[]); 249014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideMaxAll(Vec,PetscInt [],PetscReal []); 250014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideMinAll(Vec,PetscInt [],PetscReal []); 251014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideScaleAll(Vec,const PetscScalar[]); 2524a560884SBarry Smith 253014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideNorm(Vec,PetscInt,NormType,PetscReal*); 254014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideMax(Vec,PetscInt,PetscInt *,PetscReal *); 255014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideMin(Vec,PetscInt,PetscInt *,PetscReal *); 256014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideScale(Vec,PetscInt,PetscScalar); 257014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideSet(Vec,PetscInt,PetscScalar); 258954b3ec6SBarry Smith 259954b3ec6SBarry Smith 260014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideGather(Vec,PetscInt,Vec,InsertMode); 261014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideScatter(Vec,PetscInt,Vec,InsertMode); 262014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideGatherAll(Vec,Vec[],InsertMode); 263014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideScatterAll(Vec[],Vec,InsertMode); 264d2655a18SBarry Smith 265014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetValues(Vec,PetscInt,const PetscInt[],const PetscScalar[],InsertMode); 266014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetValues(Vec,PetscInt,const PetscInt[],PetscScalar[]); 267014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAssemblyBegin(Vec); 268014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAssemblyEnd(Vec); 269014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStashSetInitialSize(Vec,PetscInt,PetscInt); 270014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStashView(Vec,PetscViewer); 271014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStashGetInfo(Vec,PetscInt*,PetscInt*,PetscInt*,PetscInt*); 27262dc5420SSatish Balay 27330de9b25SBarry Smith /*MC 27430de9b25SBarry Smith VecSetValue - Set a single entry into a vector. 27530de9b25SBarry Smith 27630de9b25SBarry Smith Synopsis: 2778122439eSJed Brown PetscErrorCode VecSetValue(Vec v,PetscInt row,PetscScalar value, InsertMode mode); 27830de9b25SBarry Smith 27930de9b25SBarry Smith Not Collective 28030de9b25SBarry Smith 28130de9b25SBarry Smith Input Parameters: 28230de9b25SBarry Smith + v - the vector 28330de9b25SBarry Smith . row - the row location of the entry 28430de9b25SBarry Smith . value - the value to insert 28530de9b25SBarry Smith - mode - either INSERT_VALUES or ADD_VALUES 28630de9b25SBarry Smith 28730de9b25SBarry Smith Notes: 28830de9b25SBarry Smith For efficiency one should use VecSetValues() and set several or 28930de9b25SBarry Smith many values simultaneously if possible. 29030de9b25SBarry Smith 2911d73ed98SBarry Smith These values may be cached, so VecAssemblyBegin() and VecAssemblyEnd() 2921d73ed98SBarry Smith MUST be called after all calls to VecSetValues() have been completed. 2931d73ed98SBarry Smith 2941d73ed98SBarry Smith VecSetValues() uses 0-based indices in Fortran as well as in C. 2951d73ed98SBarry Smith 2961d73ed98SBarry Smith Level: beginner 2971d73ed98SBarry Smith 2981d73ed98SBarry Smith .seealso: VecSetValues(), VecAssemblyBegin(), VecAssemblyEnd(), VecSetValuesBlockedLocal(), VecSetValueLocal() 2991d73ed98SBarry Smith M*/ 30050755921SBarry Smith PETSC_STATIC_INLINE PetscErrorCode VecSetValue(Vec v,PetscInt i,PetscScalar va,InsertMode mode) {return VecSetValues(v,1,&i,&va,mode);} 3011d73ed98SBarry Smith 30230de9b25SBarry Smith 303014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetBlockSize(Vec,PetscInt); 304014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetBlockSize(Vec,PetscInt*); 305014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetValuesBlocked(Vec,PetscInt,const PetscInt[],const PetscScalar[],InsertMode); 3068ed539a5SBarry Smith 307fd487807SMatthew Knepley /* Dynamic creation and loading functions */ 308014dd563SJed Brown PETSC_EXTERN PetscFList VecList; 309014dd563SJed Brown PETSC_EXTERN PetscBool VecRegisterAllCalled; 31019fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode VecSetType(Vec, VecType); 31119fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode VecGetType(Vec, VecType *); 312014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecRegister(const char[],const char[],const char[],PetscErrorCode (*)(Vec)); 313014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecRegisterAll(const char []); 314014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecRegisterDestroy(void); 31530de9b25SBarry Smith 31630de9b25SBarry Smith /*MC 31730de9b25SBarry Smith VecRegisterDynamic - Adds a new vector component implementation 31830de9b25SBarry Smith 31930de9b25SBarry Smith Synopsis: 3201890ba74SBarry Smith PetscErrorCode VecRegisterDynamic(const char *name, const char *path, const char *func_name, PetscErrorCode (*create_func)(Vec)) 32130de9b25SBarry Smith 32230de9b25SBarry Smith Not Collective 32330de9b25SBarry Smith 32430de9b25SBarry Smith Input Parameters: 32530de9b25SBarry Smith + name - The name of a new user-defined creation routine 32630de9b25SBarry Smith . path - The path (either absolute or relative) of the library containing this routine 32730de9b25SBarry Smith . func_name - The name of routine to create method context 32830de9b25SBarry Smith - create_func - The creation routine itself 32930de9b25SBarry Smith 33030de9b25SBarry Smith Notes: 33130de9b25SBarry Smith VecRegisterDynamic() may be called multiple times to add several user-defined vectors 33230de9b25SBarry Smith 33330de9b25SBarry Smith If dynamic libraries are used, then the fourth input argument (routine_create) is ignored. 33430de9b25SBarry Smith 33530de9b25SBarry Smith Sample usage: 33630de9b25SBarry Smith .vb 33730de9b25SBarry Smith VecRegisterDynamic("my_vec","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyVectorCreate", MyVectorCreate); 33830de9b25SBarry Smith .ve 33930de9b25SBarry Smith 34030de9b25SBarry Smith Then, your vector type can be chosen with the procedural interface via 34130de9b25SBarry Smith .vb 34230de9b25SBarry Smith VecCreate(MPI_Comm, Vec *); 34330de9b25SBarry Smith VecSetType(Vec,"my_vector_name"); 34430de9b25SBarry Smith .ve 34530de9b25SBarry Smith or at runtime via the option 34630de9b25SBarry Smith .vb 34730de9b25SBarry Smith -vec_type my_vector_name 34830de9b25SBarry Smith .ve 34930de9b25SBarry Smith 350ab901514SBarry Smith Notes: $PETSC_ARCH occuring in pathname will be replaced with appropriate values. 35130de9b25SBarry Smith If your function is not being put into a shared library then use VecRegister() instead 35230de9b25SBarry Smith 35330de9b25SBarry Smith Level: advanced 35430de9b25SBarry Smith 35530de9b25SBarry Smith .keywords: Vec, register 35630de9b25SBarry Smith .seealso: VecRegisterAll(), VecRegisterDestroy(), VecRegister() 35730de9b25SBarry Smith M*/ 358aa482453SBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 359f1af5d2fSBarry Smith #define VecRegisterDynamic(a,b,c,d) VecRegister(a,b,c,0) 36088d459dfSBarry Smith #else 361f1af5d2fSBarry Smith #define VecRegisterDynamic(a,b,c,d) VecRegister(a,b,c,d) 36288d459dfSBarry Smith #endif 36388d459dfSBarry Smith 36409321671SBarry Smith 365014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterCreate(Vec,IS,Vec,IS,VecScatter *); 366014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterCreateEmpty(MPI_Comm,VecScatter *); 367014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterCreateLocal(VecScatter,PetscInt,const PetscInt[],const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],const PetscInt[],PetscInt); 368014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterBegin(VecScatter,Vec,Vec,InsertMode,ScatterMode); 369014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterEnd(VecScatter,Vec,Vec,InsertMode,ScatterMode); 370014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterDestroy(VecScatter*); 371014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterCopy(VecScatter,VecScatter *); 372014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterView(VecScatter,PetscViewer); 373014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterRemap(VecScatter,PetscInt *,PetscInt*); 374014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterGetMerged(VecScatter,PetscBool *); 3752195c698SBarry Smith 376014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetArray4d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar****[]); 377014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecRestoreArray4d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar****[]); 378014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetArray3d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar***[]); 379014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecRestoreArray3d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar***[]); 380014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetArray2d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar**[]); 381014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecRestoreArray2d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar**[]); 382014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetArray1d(Vec,PetscInt,PetscInt,PetscScalar *[]); 383014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecRestoreArray1d(Vec,PetscInt,PetscInt,PetscScalar *[]); 384ab360428SBarry Smith 385014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecPlaceArray(Vec,const PetscScalar[]); 386014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecResetArray(Vec); 387014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecReplaceArray(Vec,const PetscScalar[]); 388014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetArrays(const Vec[],PetscInt,PetscScalar**[]); 389014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecRestoreArrays(const Vec[],PetscInt,PetscScalar**[]); 39084cb2905SBarry Smith 391014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecView(Vec,PetscViewer); 392014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecEqual(Vec,Vec,PetscBool *); 393014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecLoad(Vec, PetscViewer); 3948ed539a5SBarry Smith 395014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetSize(Vec,PetscInt*); 396014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetLocalSize(Vec,PetscInt*); 397014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetOwnershipRange(Vec,PetscInt*,PetscInt*); 398014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetOwnershipRanges(Vec,const PetscInt *[]); 3998ed539a5SBarry Smith 400014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetLocalToGlobalMapping(Vec,ISLocalToGlobalMapping); 401014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetValuesLocal(Vec,PetscInt,const PetscInt[],const PetscScalar[],InsertMode); 40288b03592SBarry Smith 40388b03592SBarry Smith /*MC 40488b03592SBarry Smith VecSetValueLocal - Set a single entry into a vector using the local numbering 40588b03592SBarry Smith 40688b03592SBarry Smith Synopsis: 4078122439eSJed Brown PetscErrorCode VecSetValueLocal(Vec v,PetscInt row,PetscScalar value, InsertMode mode); 40888b03592SBarry Smith 40988b03592SBarry Smith Not Collective 41088b03592SBarry Smith 41188b03592SBarry Smith Input Parameters: 41288b03592SBarry Smith + v - the vector 41388b03592SBarry Smith . row - the row location of the entry 41488b03592SBarry Smith . value - the value to insert 41588b03592SBarry Smith - mode - either INSERT_VALUES or ADD_VALUES 41688b03592SBarry Smith 41788b03592SBarry Smith Notes: 41888b03592SBarry Smith For efficiency one should use VecSetValues() and set several or 41988b03592SBarry Smith many values simultaneously if possible. 42088b03592SBarry Smith 42188b03592SBarry Smith These values may be cached, so VecAssemblyBegin() and VecAssemblyEnd() 42288b03592SBarry Smith MUST be called after all calls to VecSetValues() have been completed. 42388b03592SBarry Smith 42488b03592SBarry Smith VecSetValues() uses 0-based indices in Fortran as well as in C. 42588b03592SBarry Smith 42688b03592SBarry Smith Level: beginner 42788b03592SBarry Smith 42888b03592SBarry Smith .seealso: VecSetValues(), VecAssemblyBegin(), VecAssemblyEnd(), VecSetValuesBlockedLocal(), VecSetValue() 42988b03592SBarry Smith M*/ 43088b03592SBarry Smith PETSC_STATIC_INLINE PetscErrorCode VecSetValueLocal(Vec v,PetscInt i,PetscScalar va,InsertMode mode) {return VecSetValuesLocal(v,1,&i,&va,mode);} 43188b03592SBarry Smith 432014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetLocalToGlobalMappingBlock(Vec,ISLocalToGlobalMapping); 433014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetValuesBlockedLocal(Vec,PetscInt,const PetscInt[],const PetscScalar[],InsertMode); 434014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetLocalToGlobalMappingBlock(Vec,ISLocalToGlobalMapping*); 435014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetLocalToGlobalMapping(Vec,ISLocalToGlobalMapping*); 43690f02eecSBarry Smith 437014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecDotBegin(Vec,Vec,PetscScalar *); 438014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecDotEnd(Vec,Vec,PetscScalar *); 439014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecTDotBegin(Vec,Vec,PetscScalar *); 440014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecTDotEnd(Vec,Vec,PetscScalar *); 441014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNormBegin(Vec,NormType,PetscReal *); 442014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNormEnd(Vec,NormType,PetscReal *); 443d3c178dbSBarry Smith 444014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMDotBegin(Vec,PetscInt,const Vec[],PetscScalar[]); 445014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMDotEnd(Vec,PetscInt,const Vec[],PetscScalar[]); 446014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMTDotBegin(Vec,PetscInt,const Vec[],PetscScalar[]); 447014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMTDotEnd(Vec,PetscInt,const Vec[],PetscScalar[]); 448014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommSplitReductionBegin(MPI_Comm); 449a751f32aSSatish Balay 450a751f32aSSatish Balay 4514ec14c9cSBarry Smith #if defined(PETSC_USE_DEBUG) 452ab2fbef6SJed Brown #define VecValidValues(vec,argnum,input) do { \ 4534ec14c9cSBarry Smith PetscErrorCode _ierr; \ 4544ec14c9cSBarry Smith PetscInt _n,_i; \ 4554ec14c9cSBarry Smith const PetscScalar *_x; \ 4564ec14c9cSBarry Smith \ 457ab2fbef6SJed Brown if (vec->petscnative || vec->ops->getarray) { \ 4584ec14c9cSBarry Smith _ierr = VecGetLocalSize(vec,&_n);CHKERRQ(_ierr); \ 4594ec14c9cSBarry Smith _ierr = VecGetArrayRead(vec,&_x);CHKERRQ(_ierr); \ 4604ec14c9cSBarry Smith for (_i=0; _i<_n; _i++) { \ 4614ec14c9cSBarry Smith if (input) { \ 4624ec14c9cSBarry Smith if (PetscIsInfOrNanScalar(_x[_i])) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_FP,"Vec entry at local location %D is not-a-number or infinite at beginning of function: Parameter number %d",_i,argnum); \ 4634ec14c9cSBarry Smith } else { \ 4644ec14c9cSBarry Smith if (PetscIsInfOrNanScalar(_x[_i])) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_FP,"Vec entry at local location %D is not-a-number or infinite at end of function: Parameter number %d",_i,argnum); \ 4654ec14c9cSBarry Smith } \ 4664ec14c9cSBarry Smith } \ 4674ec14c9cSBarry Smith _ierr = VecRestoreArrayRead(vec,&_x);CHKERRQ(_ierr); \ 468ab2fbef6SJed Brown } \ 469ab2fbef6SJed Brown } while (0) 4704ec14c9cSBarry Smith #else 4714ec14c9cSBarry Smith #define VecValidValues(vec,argnum,input) 4724ec14c9cSBarry Smith #endif 4734ec14c9cSBarry Smith 4744ec14c9cSBarry Smith 4759533e83fSBarry Smith typedef enum {VEC_IGNORE_OFF_PROC_ENTRIES,VEC_IGNORE_NEGATIVE_INDICES} VecOption; 476014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetOption(Vec,VecOption,PetscBool ); 47790f02eecSBarry Smith 478ebe3b25bSBarry Smith /* 479ebe3b25bSBarry Smith Expose VecGetArray()/VecRestoreArray() to users. Allows this to work without any function 480ebe3b25bSBarry Smith call overhead on any 'native' Vecs. 481ebe3b25bSBarry Smith */ 482e1fa1e0fSSatish Balay 4832c8e378dSBarry Smith #include <petsc-private/vecimpl.h> 484ebe3b25bSBarry Smith 485014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecContourScale(Vec,PetscReal,PetscReal); 486522c5e43SBarry Smith 48715091d37SBarry Smith /* 48815091d37SBarry Smith These numbers need to match the entries in 4893c94ec11SBarry Smith the function table in vecimpl.h 49015091d37SBarry Smith */ 4912dcb2ebcSBarry Smith typedef enum { VECOP_VIEW = 33, VECOP_LOAD = 41, VECOP_DUPLICATE = 0} VecOperation; 492014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetOperation(Vec,VecOperation,void(*)(void)); 493b19c1e4cSBarry Smith 494e182c471SBarry Smith /* 495e182c471SBarry Smith Routines for dealing with ghosted vectors: 496e182c471SBarry Smith vectors with ghost elements at the end of the array. 497e182c471SBarry Smith */ 498014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMPISetGhost(Vec,PetscInt,const PetscInt[]); 499014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateGhost(MPI_Comm,PetscInt,PetscInt,PetscInt,const PetscInt[],Vec*); 500014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateGhostWithArray(MPI_Comm,PetscInt,PetscInt,PetscInt,const PetscInt[],const PetscScalar[],Vec*); 501014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateGhostBlock(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscInt,const PetscInt[],Vec*); 502014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateGhostBlockWithArray(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscInt,const PetscInt[],const PetscScalar[],Vec*); 503014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGhostGetLocalForm(Vec,Vec*); 504014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGhostRestoreLocalForm(Vec,Vec*); 5053efe6655SBarry Smith PETSC_EXTERN PetscErrorCode VecGhostIsLocalForm(Vec,Vec,PetscBool*); 506014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGhostUpdateBegin(Vec,InsertMode,ScatterMode); 507014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGhostUpdateEnd(Vec,InsertMode,ScatterMode); 508e182c471SBarry Smith 509014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecConjugate(Vec); 51034233285SBarry Smith 511014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterCreateToAll(Vec,VecScatter*,Vec*); 512014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterCreateToZero(Vec,VecScatter*,Vec*); 513bba1ac68SSatish Balay 514014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscViewerMathematicaGetVector(PetscViewer, Vec); 515014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscViewerMathematicaPutVector(PetscViewer, Vec); 5167dbadf16SMatthew Knepley 517d59c15a7SBarry Smith /*S 518d59c15a7SBarry Smith Vecs - Collection of vectors where the data for the vectors is stored in 519759e7b9cSHong Zhang one contiguous memory 520d59c15a7SBarry Smith 521d59c15a7SBarry Smith Level: advanced 522d59c15a7SBarry Smith 523d59c15a7SBarry Smith Notes: 524d59c15a7SBarry Smith Temporary construct for handling multiply right hand side solves 525d59c15a7SBarry Smith 526d59c15a7SBarry Smith This is faked by storing a single vector that has enough array space for 527d59c15a7SBarry Smith n vectors 528d59c15a7SBarry Smith 529d59c15a7SBarry Smith Concepts: parallel decomposition 530d59c15a7SBarry Smith 531d59c15a7SBarry Smith S*/ 53295fbd943SSatish Balay struct _n_Vecs {PetscInt n; Vec v;}; 53395fbd943SSatish Balay typedef struct _n_Vecs* Vecs; 534fcfd50ebSBarry Smith #define VecsDestroy(x) (VecDestroy(&(x)->v) || PetscFree(x)) 53595fbd943SSatish Balay #define VecsCreateSeq(comm,p,m,x) (PetscNew(struct _n_Vecs,x) || VecCreateSeq(comm,p*m,&(*(x))->v) || (-1 == ((*(x))->n = (m)))) 536778a2246SBarry Smith #define VecsCreateSeqWithArray(comm,p,m,a,x) (PetscNew(struct _n_Vecs,x) || VecCreateSeqWithArray(comm,1,p*m,a,&(*(x))->v) || (-1 == ((*(x))->n = (m)))) 53795fbd943SSatish Balay #define VecsDuplicate(x,y) (PetscNew(struct _n_Vecs,y) || VecDuplicate(x->v,&(*(y))->v) || (-1 == ((*(y))->n = (x)->n))) 538e9fa29b7SSatish Balay 5398154be41SBarry Smith #if defined(PETSC_HAVE_CUSP) 540a5891931SBarry Smith typedef struct _p_PetscCUSPIndices* PetscCUSPIndices; 541014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCUSPIndicesCreate(PetscInt, PetscInt*,PetscInt, PetscInt*,PetscCUSPIndices*); 542014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCUSPIndicesDestroy(PetscCUSPIndices*); 543014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCUSPCopyToGPUSome_Public(Vec,PetscCUSPIndices); 544014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCUSPCopyFromGPUSome_Public(Vec,PetscCUSPIndices); 54590c53902SBarry Smith 546bd72cc96SPaul Mullowney #if defined(PETSC_HAVE_TXPETSCGPU) 547014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCUSPResetIndexBuffersFlagsGPU_Public(PetscCUSPIndices); 548014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCUSPCopySomeToContiguousBufferGPU_Public(Vec,PetscCUSPIndices); 549014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCUSPCopySomeFromContiguousBufferGPU_Public(Vec,PetscCUSPIndices); 550014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterInitializeForGPU(VecScatter,Vec,ScatterMode); 551014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterFinalizeForGPU(VecScatter); 552bd72cc96SPaul Mullowney #endif 553bd72cc96SPaul Mullowney 554014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateSeqCUSP(MPI_Comm,PetscInt,Vec*); 555014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateMPICUSP(MPI_Comm,PetscInt,PetscInt,Vec*); 556a5891931SBarry Smith #endif 557e9fa29b7SSatish Balay 558014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNestGetSubVecs(Vec,PetscInt*,Vec**); 559014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNestGetSubVec(Vec,PetscInt,Vec*); 560014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNestSetSubVecs(Vec,PetscInt,PetscInt*,Vec*); 561014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNestSetSubVec(Vec,PetscInt,Vec); 562014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateNest(MPI_Comm,PetscInt,IS*,Vec*,Vec*); 563014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNestGetSize(Vec,PetscInt*); 56445b63f25SDmitry Karpeev 565ab352700SBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsVec(const char[],const char[],const char[],Vec,PetscBool*); 5664325cce7SMatthew G Knepley PETSC_EXTERN PetscErrorCode VecChop(Vec,PetscReal); 567ab352700SBarry Smith 5682eac72dbSBarry Smith #endif 5692b82984cSSatish Balay 570