12eac72dbSBarry Smith /* 237f753daSBarry Smith Defines the vector component of PETSc. Vectors generally represent 337f753daSBarry Smith degrees of freedom for finite element/finite difference functions 484cb2905SBarry Smith on a grid. They have more mathematical structure then simple arrays. 52eac72dbSBarry Smith */ 62eac72dbSBarry Smith 70a835dfdSSatish Balay #ifndef __PETSCVEC_H 80a835dfdSSatish Balay #define __PETSCVEC_H 90a835dfdSSatish Balay #include "petscis.h" 100a835dfdSSatish Balay #include "petscsys.h" 11e9fa29b7SSatish Balay PETSC_EXTERN_CXX_BEGIN 122eac72dbSBarry Smith 1309321671SBarry Smith /*S 148a124369SBarry Smith PetscMap - Abstract PETSc object that defines the layout of vector and 15013c094aSBarry Smith matrices across processors 1609321671SBarry Smith 1709321671SBarry Smith Level: advanced 1809321671SBarry Smith 1909321671SBarry Smith Notes: 2009321671SBarry Smith Does not play a role in the PETSc design, can be ignored 2109321671SBarry Smith 2209321671SBarry Smith Concepts: parallel decomposition 2309321671SBarry Smith 248a124369SBarry Smith .seealso: PetscMapCreateMPI() 2509321671SBarry Smith S*/ 268a124369SBarry Smith typedef struct _p_PetscMap* PetscMap; 2709321671SBarry Smith 28d772e1d7SMatthew Knepley #define MAP_SEQ "seq" 29d772e1d7SMatthew Knepley #define MAP_MPI "mpi" 3049773a63SBarry Smith #define PetscMapType char* 31d772e1d7SMatthew Knepley 32d772e1d7SMatthew Knepley /* Logging support */ 33*6849ba73SBarry Smith extern PetscCookie MAP_COOKIE; 34d772e1d7SMatthew Knepley 35dfbe8321SBarry Smith EXTERN PetscErrorCode PetscMapCreate(MPI_Comm,PetscMap*); 36dfbe8321SBarry Smith EXTERN PetscErrorCode PetscMapCreateMPI(MPI_Comm,int,int,PetscMap*); 37dfbe8321SBarry Smith EXTERN PetscErrorCode PetscMapSetFromOptions(PetscMap); 38dfbe8321SBarry Smith EXTERN PetscErrorCode PetscMapPrintHelp(PetscMap); 39dfbe8321SBarry Smith EXTERN PetscErrorCode PetscMapDestroy(PetscMap); 40d772e1d7SMatthew Knepley 41dfbe8321SBarry Smith EXTERN PetscErrorCode PetscMapSetLocalSize(PetscMap,int); 42dfbe8321SBarry Smith EXTERN PetscErrorCode PetscMapGetLocalSize(PetscMap,int *); 43dfbe8321SBarry Smith EXTERN PetscErrorCode PetscMapSetSize(PetscMap,int); 44dfbe8321SBarry Smith EXTERN PetscErrorCode PetscMapGetSize(PetscMap,int *); 45dfbe8321SBarry Smith EXTERN PetscErrorCode PetscMapGetLocalRange(PetscMap,int *,int *); 46dfbe8321SBarry Smith EXTERN PetscErrorCode PetscMapGetGlobalRange(PetscMap,int *[]); 47d772e1d7SMatthew Knepley 48d772e1d7SMatthew Knepley /* Dynamic creation and loading functions */ 49d772e1d7SMatthew Knepley extern PetscFList PetscMapList; 50d772e1d7SMatthew Knepley extern PetscTruth PetscMapRegisterAllCalled; 51dfbe8321SBarry Smith EXTERN PetscErrorCode PetscMapSetType(PetscMap, const PetscMapType); 52dfbe8321SBarry Smith EXTERN PetscErrorCode PetscMapGetType(PetscMap, PetscMapType *); 53*6849ba73SBarry Smith EXTERN PetscErrorCode PetscMapRegister(const char[],const char[],const char[],PetscErrorCode (*)(PetscMap)); 54dfbe8321SBarry Smith EXTERN PetscErrorCode PetscMapRegisterAll(const char []); 55dfbe8321SBarry Smith EXTERN PetscErrorCode PetscMapRegisterDestroy(void); 56d772e1d7SMatthew Knepley #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 57d772e1d7SMatthew Knepley #define PetscMapRegisterDynamic(a,b,c,d) PetscMapRegister(a,b,c,0) 58d772e1d7SMatthew Knepley #else 59d772e1d7SMatthew Knepley #define PetscMapRegisterDynamic(a,b,c,d) PetscMapRegister(a,b,c,d) 60d772e1d7SMatthew Knepley #endif 61d772e1d7SMatthew Knepley 6209321671SBarry Smith /*S 6309321671SBarry Smith Vec - Abstract PETSc vector object 6409321671SBarry Smith 6509321671SBarry Smith Level: beginner 6609321671SBarry Smith 6709321671SBarry Smith Concepts: field variables, unknowns, arrays 6809321671SBarry Smith 6909321671SBarry Smith .seealso: VecCreate(), VecType, VecSetType() 7009321671SBarry Smith S*/ 71f09e8eb9SSatish Balay typedef struct _p_Vec* Vec; 7209321671SBarry Smith 7309321671SBarry Smith /*S 7409321671SBarry Smith VecScatter - Object used to manage communication of data 7509321671SBarry Smith between vectors in parallel. Manages both scatters and gathers 7609321671SBarry Smith 7709321671SBarry Smith Level: beginner 7809321671SBarry Smith 7909321671SBarry Smith Concepts: scatter 8009321671SBarry Smith 8109321671SBarry Smith .seealso: VecScatterCreate(), VecScatterBegin(), VecScatterEnd() 8209321671SBarry Smith S*/ 83f09e8eb9SSatish Balay typedef struct _p_VecScatter* VecScatter; 8409321671SBarry Smith 8509321671SBarry Smith /*E 8609321671SBarry Smith VecType - String with the name of a PETSc vector or the creation function 8709321671SBarry Smith with an optional dynamic library name, for example 8809321671SBarry Smith http://www.mcs.anl.gov/petsc/lib.a:myveccreate() 8909321671SBarry Smith 9009321671SBarry Smith Level: beginner 9109321671SBarry Smith 9209321671SBarry Smith .seealso: VecSetType(), Vec 9309321671SBarry Smith E*/ 940676abe4SMatthew Knepley #define VECSEQ "seq" 950676abe4SMatthew Knepley #define VECMPI "mpi" 960676abe4SMatthew Knepley #define VECFETI "feti" 970676abe4SMatthew Knepley #define VECSHARED "shared" 980676abe4SMatthew Knepley #define VECESI "esi" 990676abe4SMatthew Knepley #define VECPETSCESI "petscesi" 10049773a63SBarry Smith #define VecType char* 1012eac72dbSBarry Smith 102fd487807SMatthew Knepley /* Logging support */ 103552e946dSBarry Smith #define VEC_FILE_COOKIE 1211214 104*6849ba73SBarry Smith extern PetscCookie VEC_COOKIE, VEC_SCATTER_COOKIE; 105*6849ba73SBarry Smith extern PetscEvent VEC_View, VEC_Max, VEC_Min, VEC_DotBarrier, VEC_Dot, VEC_MDotBarrier, VEC_MDot, VEC_TDot, VEC_MTDot; 106*6849ba73SBarry Smith extern PetscEvent VEC_Norm, VEC_Normalize, VEC_Scale, VEC_Copy, VEC_Set, VEC_AXPY, VEC_AYPX, VEC_WAXPY, VEC_MAXPY; 107*6849ba73SBarry Smith extern PetscEvent VEC_AssemblyEnd, VEC_PointwiseMult, VEC_SetValues, VEC_Load, VEC_ScatterBarrier, VEC_ScatterBegin, VEC_ScatterEnd; 108*6849ba73SBarry Smith extern PetscEvent VEC_SetRandom, VEC_ReduceArithmetic, VEC_ReduceBarrier, VEC_ReduceCommunication; 109*6849ba73SBarry Smith extern PetscEvent VEC_Swap, VEC_AssemblyBegin, VEC_NormBarrier; 1108ba1e511SMatthew Knepley 111dfbe8321SBarry Smith EXTERN PetscErrorCode VecInitializePackage(char *); 112fd487807SMatthew Knepley 113dfbe8321SBarry Smith EXTERN PetscErrorCode VecCreate(MPI_Comm,Vec *); 114dfbe8321SBarry Smith EXTERN PetscErrorCode VecCreateSeq(MPI_Comm,int,Vec*); 115dfbe8321SBarry Smith EXTERN PetscErrorCode VecCreateMPI(MPI_Comm,int,int,Vec*); 116dfbe8321SBarry Smith EXTERN PetscErrorCode VecCreateSeqWithArray(MPI_Comm,int,const PetscScalar[],Vec*); 117dfbe8321SBarry Smith EXTERN PetscErrorCode VecCreateMPIWithArray(MPI_Comm,int,int,const PetscScalar[],Vec*); 118dfbe8321SBarry Smith EXTERN PetscErrorCode VecCreateShared(MPI_Comm,int,int,Vec*); 119dfbe8321SBarry Smith EXTERN PetscErrorCode VecSetFromOptions(Vec); 120dfbe8321SBarry Smith EXTERN PetscErrorCode VecPrintHelp(Vec); 121dfbe8321SBarry Smith EXTERN PetscErrorCode VecDestroy(Vec); 1224b0e389bSBarry Smith 123dfbe8321SBarry Smith EXTERN PetscErrorCode VecSetSizes(Vec,int,int); 124fd487807SMatthew Knepley 125dfbe8321SBarry Smith EXTERN PetscErrorCode VecDot(Vec,Vec,PetscScalar*); 126dfbe8321SBarry Smith EXTERN PetscErrorCode VecTDot(Vec,Vec,PetscScalar*); 127dfbe8321SBarry Smith EXTERN PetscErrorCode VecMDot(int,Vec,const Vec[],PetscScalar*); 128dfbe8321SBarry Smith EXTERN PetscErrorCode VecMTDot(int,Vec,const Vec[],PetscScalar*); 129cddf8d76SBarry Smith 13009321671SBarry Smith /*E 13109321671SBarry Smith NormType - determines what type of norm to compute 13209321671SBarry Smith 13309321671SBarry Smith Level: beginner 13409321671SBarry Smith 13509321671SBarry Smith .seealso: VecNorm(), VecNormBegin(), VecNormEnd(), MatNorm() 13609321671SBarry Smith E*/ 13793c39befSBarry Smith typedef enum {NORM_1=1,NORM_2=2,NORM_FROBENIUS=3,NORM_INFINITY=4,NORM_1_AND_2=5} NormType; 138cddf8d76SBarry Smith #define NORM_MAX NORM_INFINITY 13909321671SBarry Smith 1409b250c83SBarry Smith /*MC 1419b250c83SBarry Smith NORM_1 - the one norm, ||v|| = sum_i | v_i |. ||A|| = max_j || v_*j ||, maximum column sum 1429b250c83SBarry Smith 1439b250c83SBarry Smith Level: beginner 1449b250c83SBarry Smith 1459b250c83SBarry Smith .seealso: NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_2, NORM_FROBENIUS, 1469b250c83SBarry Smith NORM_INFINITY, NORM_1_AND_2 1479b250c83SBarry Smith 1489b250c83SBarry Smith M*/ 1499b250c83SBarry Smith 1509b250c83SBarry Smith /*MC 1519b250c83SBarry Smith NORM_2 - the two norm, ||v|| = sqrt(sum_i (v_i)^2) (vectors only) 1529b250c83SBarry Smith 1539b250c83SBarry Smith Level: beginner 1549b250c83SBarry Smith 1559b250c83SBarry Smith .seealso: NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_FROBENIUS, 1569b250c83SBarry Smith NORM_INFINITY, NORM_1_AND_2 1579b250c83SBarry Smith 1589b250c83SBarry Smith M*/ 1599b250c83SBarry Smith 1609b250c83SBarry Smith /*MC 1619b250c83SBarry Smith NORM_FROBENIUS - ||A|| = sqrt(sum_ij (A_ij)^2), same as NORM_2 for vectors 1629b250c83SBarry Smith 1639b250c83SBarry Smith Level: beginner 1649b250c83SBarry Smith 1659b250c83SBarry Smith .seealso: NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_2, 1669b250c83SBarry Smith NORM_INFINITY, NORM_1_AND_2 1679b250c83SBarry Smith 1689b250c83SBarry Smith M*/ 1699b250c83SBarry Smith 1709b250c83SBarry Smith /*MC 1719b250c83SBarry Smith NORM_INFINITY - ||v|| = max_i |v_i|. ||A|| = max_i || v_i* ||, maximum row sum 1729b250c83SBarry Smith 1739b250c83SBarry Smith Level: beginner 1749b250c83SBarry Smith 1759b250c83SBarry Smith .seealso: NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_2, 1769b250c83SBarry Smith NORM_FROBINIUS, NORM_1_AND_2 1779b250c83SBarry Smith 1789b250c83SBarry Smith M*/ 1799b250c83SBarry Smith 1809b250c83SBarry Smith /*MC 1819b250c83SBarry Smith NORM_1_AND_2 - computes both the 1 and 2 norm of a vector 1829b250c83SBarry Smith 1839b250c83SBarry Smith Level: beginner 1849b250c83SBarry Smith 1859b250c83SBarry Smith .seealso: NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_2, 1869b250c83SBarry Smith NORM_FROBINIUS, NORM_INFINITY 1879b250c83SBarry Smith 1889b250c83SBarry Smith M*/ 1899b250c83SBarry Smith 1909b250c83SBarry Smith /*MC 1919b250c83SBarry Smith NORM_MAX - see NORM_INFINITY 1929b250c83SBarry Smith 193d41222bbSBarry Smith Level: beginner 194d41222bbSBarry Smith 1959b250c83SBarry Smith M*/ 1969b250c83SBarry Smith 197dfbe8321SBarry Smith EXTERN PetscErrorCode VecNorm(Vec,NormType,PetscReal *); 198dfbe8321SBarry Smith EXTERN PetscErrorCode VecNormComposedDataID(NormType,int*); 199dfbe8321SBarry Smith EXTERN PetscErrorCode VecNormalize(Vec,PetscReal *); 200dfbe8321SBarry Smith EXTERN PetscErrorCode VecSum(Vec,PetscScalar*); 201dfbe8321SBarry Smith EXTERN PetscErrorCode VecMax(Vec,int*,PetscReal *); 202dfbe8321SBarry Smith EXTERN PetscErrorCode VecMin(Vec,int*,PetscReal *); 203dfbe8321SBarry Smith EXTERN PetscErrorCode VecScale(const PetscScalar *a,Vec v); 204dfbe8321SBarry Smith EXTERN PetscErrorCode VecCopy(Vec,Vec); 205dfbe8321SBarry Smith EXTERN PetscErrorCode VecSetRandom(PetscRandom,Vec); 206dfbe8321SBarry Smith EXTERN PetscErrorCode VecSet(const PetscScalar*,Vec); 207dfbe8321SBarry Smith EXTERN PetscErrorCode VecSwap(Vec,Vec); 208dfbe8321SBarry Smith EXTERN PetscErrorCode VecAXPY(const PetscScalar*,Vec,Vec); 209dfbe8321SBarry Smith EXTERN PetscErrorCode VecAXPBY(const PetscScalar*,const PetscScalar *,Vec,Vec); 210dfbe8321SBarry Smith EXTERN PetscErrorCode VecMAXPY(int,const PetscScalar*,Vec,Vec*); 211dfbe8321SBarry Smith EXTERN PetscErrorCode VecAYPX(const PetscScalar*,Vec,Vec); 212dfbe8321SBarry Smith EXTERN PetscErrorCode VecWAXPY(const PetscScalar*,Vec,Vec,Vec); 213dfbe8321SBarry Smith EXTERN PetscErrorCode VecPointwiseMult(Vec,Vec,Vec); 214dfbe8321SBarry Smith EXTERN PetscErrorCode VecPointwiseDivide(Vec,Vec,Vec); 215dfbe8321SBarry Smith EXTERN PetscErrorCode VecMaxPointwiseDivide(Vec,Vec,PetscReal*); 216dfbe8321SBarry Smith EXTERN PetscErrorCode VecShift(const PetscScalar*,Vec); 217dfbe8321SBarry Smith EXTERN PetscErrorCode VecReciprocal(Vec); 218dfbe8321SBarry Smith EXTERN PetscErrorCode VecPermute(Vec, IS, PetscTruth); 219dfbe8321SBarry Smith EXTERN PetscErrorCode VecSqrt(Vec); 220dfbe8321SBarry Smith EXTERN PetscErrorCode VecAbs(Vec); 221dfbe8321SBarry Smith EXTERN PetscErrorCode VecDuplicate(Vec,Vec*); 222dfbe8321SBarry Smith EXTERN PetscErrorCode VecDuplicateVecs(Vec,int,Vec*[]); 223dfbe8321SBarry Smith EXTERN PetscErrorCode VecDestroyVecs(const Vec[],int); 224dfbe8321SBarry Smith EXTERN PetscErrorCode VecGetPetscMap(Vec,PetscMap*); 2252eac72dbSBarry Smith 226dfbe8321SBarry Smith EXTERN PetscErrorCode VecStrideNormAll(Vec,NormType,PetscReal*); 227dfbe8321SBarry Smith EXTERN PetscErrorCode VecStrideMaxAll(Vec,int *,PetscReal *); 228dfbe8321SBarry Smith EXTERN PetscErrorCode VecStrideMinAll(Vec,int *,PetscReal *); 229dfbe8321SBarry Smith EXTERN PetscErrorCode VecStrideScaleAll(Vec,PetscScalar*); 2304a560884SBarry Smith 231dfbe8321SBarry Smith EXTERN PetscErrorCode VecStrideNorm(Vec,int,NormType,PetscReal*); 232dfbe8321SBarry Smith EXTERN PetscErrorCode VecStrideMax(Vec,int,int *,PetscReal *); 233dfbe8321SBarry Smith EXTERN PetscErrorCode VecStrideMin(Vec,int,int *,PetscReal *); 234dfbe8321SBarry Smith EXTERN PetscErrorCode VecStrideScale(Vec,int,PetscScalar*); 235dfbe8321SBarry Smith EXTERN PetscErrorCode VecStrideGather(Vec,int,Vec,InsertMode); 236dfbe8321SBarry Smith EXTERN PetscErrorCode VecStrideScatter(Vec,int,Vec,InsertMode); 237dfbe8321SBarry Smith EXTERN PetscErrorCode VecStrideGatherAll(Vec,Vec*,InsertMode); 238dfbe8321SBarry Smith EXTERN PetscErrorCode VecStrideScatterAll(Vec*,Vec,InsertMode); 239d2655a18SBarry Smith 240dfbe8321SBarry Smith EXTERN PetscErrorCode VecSetValues(Vec,int,const int[],const PetscScalar[],InsertMode); 241dfbe8321SBarry Smith EXTERN PetscErrorCode VecAssemblyBegin(Vec); 242dfbe8321SBarry Smith EXTERN PetscErrorCode VecAssemblyEnd(Vec); 243dfbe8321SBarry Smith EXTERN PetscErrorCode VecStashSetInitialSize(Vec,int,int); 244dfbe8321SBarry Smith EXTERN PetscErrorCode VecStashView(Vec,PetscViewer); 245dfbe8321SBarry Smith EXTERN PetscErrorCode VecStashGetInfo(Vec,int*,int*,int*,int*); 24662dc5420SSatish Balay 2471d73ed98SBarry Smith extern int VecSetValue_Row; 2481d73ed98SBarry Smith extern PetscScalar VecSetValue_Value; 24930de9b25SBarry Smith /*MC 25030de9b25SBarry Smith VecSetValue - Set a single entry into a vector. 25130de9b25SBarry Smith 25230de9b25SBarry Smith Synopsis: 25330de9b25SBarry Smith int VecSetValue(Vec v,int row,PetscScalar value, InsertMode mode); 25430de9b25SBarry Smith 25530de9b25SBarry Smith Not Collective 25630de9b25SBarry Smith 25730de9b25SBarry Smith Input Parameters: 25830de9b25SBarry Smith + v - the vector 25930de9b25SBarry Smith . row - the row location of the entry 26030de9b25SBarry Smith . value - the value to insert 26130de9b25SBarry Smith - mode - either INSERT_VALUES or ADD_VALUES 26230de9b25SBarry Smith 26330de9b25SBarry Smith Notes: 26430de9b25SBarry Smith For efficiency one should use VecSetValues() and set several or 26530de9b25SBarry Smith many values simultaneously if possible. 26630de9b25SBarry Smith 2671d73ed98SBarry Smith These values may be cached, so VecAssemblyBegin() and VecAssemblyEnd() 2681d73ed98SBarry Smith MUST be called after all calls to VecSetValues() have been completed. 2691d73ed98SBarry Smith 2701d73ed98SBarry Smith VecSetValues() uses 0-based indices in Fortran as well as in C. 2711d73ed98SBarry Smith 2721d73ed98SBarry Smith Level: beginner 2731d73ed98SBarry Smith 2741d73ed98SBarry Smith .seealso: VecSetValues(), VecAssemblyBegin(), VecAssemblyEnd(), VecSetValuesBlockedLocal(), VecSetValueLocal() 2751d73ed98SBarry Smith M*/ 2761d73ed98SBarry Smith #define VecSetValue(v,i,va,mode) (VecSetValue_Row = i, VecSetValue_Value = va, VecSetValues(v,1,&VecSetValue_Row,&VecSetValue_Value,mode)) 2771d73ed98SBarry Smith 2781d73ed98SBarry Smith /*MC 2791d73ed98SBarry Smith VecSetValueLocal - Set a single entry into a vector using the local numbering 2801d73ed98SBarry Smith 2811d73ed98SBarry Smith Synopsis: 2821d73ed98SBarry Smith int VecSetValueLocal(Vec v,int row,PetscScalar value, InsertMode mode); 2831d73ed98SBarry Smith 2841d73ed98SBarry Smith Not Collective 2851d73ed98SBarry Smith 2861d73ed98SBarry Smith Input Parameters: 2871d73ed98SBarry Smith + v - the vector 2881d73ed98SBarry Smith . row - the row location of the entry 2891d73ed98SBarry Smith . value - the value to insert 2901d73ed98SBarry Smith - mode - either INSERT_VALUES or ADD_VALUES 2911d73ed98SBarry Smith 2921d73ed98SBarry Smith Notes: 2931d73ed98SBarry Smith For efficiency one should use VecSetValues() and set several or 2941d73ed98SBarry Smith many values simultaneously if possible. 29530de9b25SBarry Smith 29630de9b25SBarry Smith These values may be cached, so VecAssemblyBegin() and VecAssemblyEnd() 29730de9b25SBarry Smith MUST be called after all calls to VecSetValues() have been completed. 29830de9b25SBarry Smith 29930de9b25SBarry Smith VecSetValues() uses 0-based indices in Fortran as well as in C. 30030de9b25SBarry Smith 30130de9b25SBarry Smith Level: beginner 30230de9b25SBarry Smith 3031d73ed98SBarry Smith .seealso: VecSetValues(), VecAssemblyBegin(), VecAssemblyEnd(), VecSetValuesBlockedLocal(), VecSetValue() 30430de9b25SBarry Smith M*/ 3051d73ed98SBarry Smith #define VecSetValueLocal(v,i,va,mode) (VecSetValue_Row = i,VecSetValue_Value = va,VecSetValuesLocal(v,1,&VecSetValue_Row,&VecSetValue_Value,mode)) 30630de9b25SBarry Smith 307dfbe8321SBarry Smith EXTERN PetscErrorCode VecSetBlockSize(Vec,int); 308dfbe8321SBarry Smith EXTERN PetscErrorCode VecGetBlockSize(Vec,int*); 309dfbe8321SBarry Smith EXTERN PetscErrorCode VecSetValuesBlocked(Vec,int,const int[],const PetscScalar[],InsertMode); 3108ed539a5SBarry Smith 311fd487807SMatthew Knepley /* Dynamic creation and loading functions */ 312fd487807SMatthew Knepley extern PetscFList VecList; 313d772e1d7SMatthew Knepley extern PetscTruth VecRegisterAllCalled; 314dfbe8321SBarry Smith EXTERN PetscErrorCode VecSetType(Vec, const VecType); 315dfbe8321SBarry Smith EXTERN PetscErrorCode VecGetType(Vec, VecType *); 316*6849ba73SBarry Smith EXTERN PetscErrorCode VecRegister(const char[],const char[],const char[],PetscErrorCode (*)(Vec)); 317dfbe8321SBarry Smith EXTERN PetscErrorCode VecRegisterAll(const char []); 318dfbe8321SBarry Smith EXTERN PetscErrorCode VecRegisterDestroy(void); 31930de9b25SBarry Smith 32030de9b25SBarry Smith /*MC 32130de9b25SBarry Smith VecRegisterDynamic - Adds a new vector component implementation 32230de9b25SBarry Smith 32330de9b25SBarry Smith Synopsis: 324*6849ba73SBarry Smith VecRegisterDynamic(char *name, char *path, char *func_name, PetscErrorCode (*create_func)(Vec)) 32530de9b25SBarry Smith 32630de9b25SBarry Smith Not Collective 32730de9b25SBarry Smith 32830de9b25SBarry Smith Input Parameters: 32930de9b25SBarry Smith + name - The name of a new user-defined creation routine 33030de9b25SBarry Smith . path - The path (either absolute or relative) of the library containing this routine 33130de9b25SBarry Smith . func_name - The name of routine to create method context 33230de9b25SBarry Smith - create_func - The creation routine itself 33330de9b25SBarry Smith 33430de9b25SBarry Smith Notes: 33530de9b25SBarry Smith VecRegisterDynamic() may be called multiple times to add several user-defined vectors 33630de9b25SBarry Smith 33730de9b25SBarry Smith If dynamic libraries are used, then the fourth input argument (routine_create) is ignored. 33830de9b25SBarry Smith 33930de9b25SBarry Smith Sample usage: 34030de9b25SBarry Smith .vb 34130de9b25SBarry Smith VecRegisterDynamic("my_vec","/home/username/my_lib/lib/libO/solaris/libmy.a", "MyVectorCreate", MyVectorCreate); 34230de9b25SBarry Smith .ve 34330de9b25SBarry Smith 34430de9b25SBarry Smith Then, your vector type can be chosen with the procedural interface via 34530de9b25SBarry Smith .vb 34630de9b25SBarry Smith VecCreate(MPI_Comm, Vec *); 34730de9b25SBarry Smith VecSetType(Vec,"my_vector_name"); 34830de9b25SBarry Smith .ve 34930de9b25SBarry Smith or at runtime via the option 35030de9b25SBarry Smith .vb 35130de9b25SBarry Smith -vec_type my_vector_name 35230de9b25SBarry Smith .ve 35330de9b25SBarry Smith 35430de9b25SBarry Smith Notes: $PETSC_ARCH and $BOPT occuring in pathname will be replaced with appropriate values. 35530de9b25SBarry Smith If your function is not being put into a shared library then use VecRegister() instead 35630de9b25SBarry Smith 35730de9b25SBarry Smith Level: advanced 35830de9b25SBarry Smith 35930de9b25SBarry Smith .keywords: Vec, register 36030de9b25SBarry Smith .seealso: VecRegisterAll(), VecRegisterDestroy(), VecRegister() 36130de9b25SBarry Smith M*/ 362aa482453SBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 363f1af5d2fSBarry Smith #define VecRegisterDynamic(a,b,c,d) VecRegister(a,b,c,0) 36488d459dfSBarry Smith #else 365f1af5d2fSBarry Smith #define VecRegisterDynamic(a,b,c,d) VecRegister(a,b,c,d) 36688d459dfSBarry Smith #endif 36788d459dfSBarry Smith 36809321671SBarry Smith 369dfbe8321SBarry Smith EXTERN PetscErrorCode VecScatterCreate(Vec,IS,Vec,IS,VecScatter *); 370dfbe8321SBarry Smith EXTERN PetscErrorCode VecScatterPostRecvs(Vec,Vec,InsertMode,ScatterMode,VecScatter); 371dfbe8321SBarry Smith EXTERN PetscErrorCode VecScatterBegin(Vec,Vec,InsertMode,ScatterMode,VecScatter); 372dfbe8321SBarry Smith EXTERN PetscErrorCode VecScatterEnd(Vec,Vec,InsertMode,ScatterMode,VecScatter); 373dfbe8321SBarry Smith EXTERN PetscErrorCode VecScatterDestroy(VecScatter); 374dfbe8321SBarry Smith EXTERN PetscErrorCode VecScatterCopy(VecScatter,VecScatter *); 375dfbe8321SBarry Smith EXTERN PetscErrorCode VecScatterView(VecScatter,PetscViewer); 376dfbe8321SBarry Smith EXTERN PetscErrorCode VecScatterRemap(VecScatter,int *,int*); 3772195c698SBarry Smith 378cb5b572fSBarry Smith typedef enum {PIPELINE_DOWN=0,PIPELINE_UP=1} PipelineDirection; 379cb5b572fSBarry Smith typedef enum {PIPELINE_NONE=1,PIPELINE_SEQUENTIAL=2, 3808ea6152fSSatish Balay PIPELINE_REDBLACK=3,PIPELINE_MULTICOLOR=4} PipelineType; 381cb5b572fSBarry Smith 382cb5b572fSBarry Smith typedef struct _p_VecPipeline* VecPipeline; 383cb5b572fSBarry Smith 384dfbe8321SBarry Smith EXTERN PetscErrorCode VecPipelineCreate(MPI_Comm,Vec,IS,Vec,IS,VecPipeline *); 385dfbe8321SBarry Smith EXTERN PetscErrorCode VecPipelineSetType(VecPipeline,PipelineType,PetscObject); 386dfbe8321SBarry Smith EXTERN PetscErrorCode VecPipelineSetup(VecPipeline); 387dfbe8321SBarry Smith EXTERN PetscErrorCode VecPipelineBegin(Vec,Vec,InsertMode,ScatterMode,PipelineDirection,VecPipeline); 388dfbe8321SBarry Smith EXTERN PetscErrorCode VecPipelineEnd(Vec,Vec,InsertMode,ScatterMode,PipelineDirection,VecPipeline); 389dfbe8321SBarry Smith EXTERN PetscErrorCode VecPipelineView(VecPipeline,PetscViewer); 390dfbe8321SBarry Smith EXTERN PetscErrorCode VecPipelineDestroy(VecPipeline); 391cb5b572fSBarry Smith 392dfbe8321SBarry Smith EXTERN PetscErrorCode VecGetArray_Private(Vec,PetscScalar*[]); 393dfbe8321SBarry Smith EXTERN PetscErrorCode VecRestoreArray_Private(Vec,PetscScalar*[]); 394dfbe8321SBarry Smith EXTERN PetscErrorCode VecGetArray4d(Vec,int,int,int,int,int,int,int,int,PetscScalar****[]); 395dfbe8321SBarry Smith EXTERN PetscErrorCode VecRestoreArray4d(Vec,int,int,int,int,int,int,int,int,PetscScalar****[]); 396dfbe8321SBarry Smith EXTERN PetscErrorCode VecGetArray3d(Vec,int,int,int,int,int,int,PetscScalar***[]); 397dfbe8321SBarry Smith EXTERN PetscErrorCode VecRestoreArray3d(Vec,int,int,int,int,int,int,PetscScalar***[]); 398dfbe8321SBarry Smith EXTERN PetscErrorCode VecGetArray2d(Vec,int,int,int,int,PetscScalar**[]); 399dfbe8321SBarry Smith EXTERN PetscErrorCode VecRestoreArray2d(Vec,int,int,int,int,PetscScalar**[]); 400dfbe8321SBarry Smith EXTERN PetscErrorCode VecGetArray1d(Vec,int,int,PetscScalar *[]); 401dfbe8321SBarry Smith EXTERN PetscErrorCode VecRestoreArray1d(Vec,int,int,PetscScalar *[]); 402ab360428SBarry Smith 403dfbe8321SBarry Smith EXTERN PetscErrorCode VecPlaceArray(Vec,const PetscScalar[]); 404dfbe8321SBarry Smith EXTERN PetscErrorCode VecResetArray(Vec); 405dfbe8321SBarry Smith EXTERN PetscErrorCode VecReplaceArray(Vec,const PetscScalar[]); 406dfbe8321SBarry Smith EXTERN PetscErrorCode VecGetArrays(const Vec[],int,PetscScalar**[]); 407dfbe8321SBarry Smith EXTERN PetscErrorCode VecRestoreArrays(const Vec[],int,PetscScalar**[]); 40884cb2905SBarry Smith 409dfbe8321SBarry Smith EXTERN PetscErrorCode VecValid(Vec,PetscTruth*); 410dfbe8321SBarry Smith EXTERN PetscErrorCode VecView(Vec,PetscViewer); 411dfbe8321SBarry Smith EXTERN PetscErrorCode VecViewFromOptions(Vec, char *); 412dfbe8321SBarry Smith EXTERN PetscErrorCode VecEqual(Vec,Vec,PetscTruth*); 413dfbe8321SBarry Smith EXTERN PetscErrorCode VecLoad(PetscViewer,const VecType,Vec*); 414dfbe8321SBarry Smith EXTERN PetscErrorCode VecLoadIntoVector(PetscViewer,Vec); 4158ed539a5SBarry Smith 416dfbe8321SBarry Smith EXTERN PetscErrorCode VecGetSize(Vec,int*); 417dfbe8321SBarry Smith EXTERN PetscErrorCode VecGetLocalSize(Vec,int*); 418dfbe8321SBarry Smith EXTERN PetscErrorCode VecGetOwnershipRange(Vec,int*,int*); 4198ed539a5SBarry Smith 420dfbe8321SBarry Smith EXTERN PetscErrorCode VecSetLocalToGlobalMapping(Vec,ISLocalToGlobalMapping); 421dfbe8321SBarry Smith EXTERN PetscErrorCode VecSetValuesLocal(Vec,int,const int[],const PetscScalar[],InsertMode); 422dfbe8321SBarry Smith EXTERN PetscErrorCode VecSetLocalToGlobalMappingBlock(Vec,ISLocalToGlobalMapping); 423dfbe8321SBarry Smith EXTERN PetscErrorCode VecSetValuesBlockedLocal(Vec,int,const int[],const PetscScalar[],InsertMode); 42490f02eecSBarry Smith 425dfbe8321SBarry Smith EXTERN PetscErrorCode VecDotBegin(Vec,Vec,PetscScalar *); 426dfbe8321SBarry Smith EXTERN PetscErrorCode VecDotEnd(Vec,Vec,PetscScalar *); 427dfbe8321SBarry Smith EXTERN PetscErrorCode VecTDotBegin(Vec,Vec,PetscScalar *); 428dfbe8321SBarry Smith EXTERN PetscErrorCode VecTDotEnd(Vec,Vec,PetscScalar *); 429dfbe8321SBarry Smith EXTERN PetscErrorCode VecNormBegin(Vec,NormType,PetscReal *); 430dfbe8321SBarry Smith EXTERN PetscErrorCode VecNormEnd(Vec,NormType,PetscReal *); 431d3c178dbSBarry Smith 432fdbc4c26SBarry Smith typedef enum {VEC_IGNORE_OFF_PROC_ENTRIES,VEC_TREAT_OFF_PROC_ENTRIES} VecOption; 433dfbe8321SBarry Smith EXTERN PetscErrorCode VecSetOption(Vec,VecOption); 43490f02eecSBarry Smith 435ebe3b25bSBarry Smith /* 436ebe3b25bSBarry Smith Expose VecGetArray()/VecRestoreArray() to users. Allows this to work without any function 437ebe3b25bSBarry Smith call overhead on any 'native' Vecs. 438ebe3b25bSBarry Smith */ 4393c94ec11SBarry Smith #include "vecimpl.h" 440ebe3b25bSBarry Smith 441dfbe8321SBarry Smith EXTERN PetscErrorCode VecContourScale(Vec,PetscReal,PetscReal); 442522c5e43SBarry Smith 44315091d37SBarry Smith /* 44415091d37SBarry Smith These numbers need to match the entries in 4453c94ec11SBarry Smith the function table in vecimpl.h 44615091d37SBarry Smith */ 447b1bcba4aSBarry Smith typedef enum { VECOP_VIEW = 32, 448b1bcba4aSBarry Smith VECOP_LOADINTOVECTOR = 38 44915091d37SBarry Smith } VecOperation; 450dfbe8321SBarry Smith EXTERN PetscErrorCode VecSetOperation(Vec,VecOperation,void(*)(void)); 451b19c1e4cSBarry Smith 452e182c471SBarry Smith /* 453e182c471SBarry Smith Routines for dealing with ghosted vectors: 454e182c471SBarry Smith vectors with ghost elements at the end of the array. 455e182c471SBarry Smith */ 456dfbe8321SBarry Smith EXTERN PetscErrorCode VecCreateGhost(MPI_Comm,int,int,int,const int[],Vec*); 457dfbe8321SBarry Smith EXTERN PetscErrorCode VecCreateGhostWithArray(MPI_Comm,int,int,int,const int[],const PetscScalar[],Vec*); 458dfbe8321SBarry Smith EXTERN PetscErrorCode VecCreateGhostBlock(MPI_Comm,int,int,int,int,const int[],Vec*); 459dfbe8321SBarry Smith EXTERN PetscErrorCode VecCreateGhostBlockWithArray(MPI_Comm,int,int,int,int,const int[],const PetscScalar[],Vec*); 460dfbe8321SBarry Smith EXTERN PetscErrorCode VecGhostGetLocalForm(Vec,Vec*); 461dfbe8321SBarry Smith EXTERN PetscErrorCode VecGhostRestoreLocalForm(Vec,Vec*); 462dfbe8321SBarry Smith EXTERN PetscErrorCode VecGhostUpdateBegin(Vec,InsertMode,ScatterMode); 463dfbe8321SBarry Smith EXTERN PetscErrorCode VecGhostUpdateEnd(Vec,InsertMode,ScatterMode); 464e182c471SBarry Smith 465dfbe8321SBarry Smith EXTERN PetscErrorCode VecConjugate(Vec); 46634233285SBarry Smith 467dfbe8321SBarry Smith EXTERN PetscErrorCode VecScatterCreateToAll(Vec,VecScatter*,Vec*); 468dfbe8321SBarry Smith EXTERN PetscErrorCode VecScatterCreateToZero(Vec,VecScatter*,Vec*); 469bba1ac68SSatish Balay 470dfbe8321SBarry Smith EXTERN PetscErrorCode VecESISetType(Vec,const char*); 471dfbe8321SBarry Smith EXTERN PetscErrorCode VecESISetFromOptions(Vec); 472bba1ac68SSatish Balay 473dfbe8321SBarry Smith EXTERN PetscErrorCode PetscViewerMathematicaGetVector(PetscViewer, Vec); 474dfbe8321SBarry Smith EXTERN PetscErrorCode PetscViewerMathematicaPutVector(PetscViewer, Vec); 4757dbadf16SMatthew Knepley 476d59c15a7SBarry Smith /*S 477d59c15a7SBarry Smith Vecs - Collection of vectors where the data for the vectors is stored in 478d59c15a7SBarry Smith one continquous memory 479d59c15a7SBarry Smith 480d59c15a7SBarry Smith Level: advanced 481d59c15a7SBarry Smith 482d59c15a7SBarry Smith Notes: 483d59c15a7SBarry Smith Temporary construct for handling multiply right hand side solves 484d59c15a7SBarry Smith 485d59c15a7SBarry Smith This is faked by storing a single vector that has enough array space for 486d59c15a7SBarry Smith n vectors 487d59c15a7SBarry Smith 488d59c15a7SBarry Smith Concepts: parallel decomposition 489d59c15a7SBarry Smith 490d59c15a7SBarry Smith S*/ 491d59c15a7SBarry Smith struct _p_Vecs {int n; Vec v;}; 492d59c15a7SBarry Smith typedef struct _p_Vecs* Vecs; 493d59c15a7SBarry Smith #define VecsDestroy(x) (VecDestroy((x)->v) || PetscFree(x)) 494d59c15a7SBarry Smith #define VecsCreateSeq(comm,p,m,x) (PetscNew(struct _p_Vecs,x) || VecCreateSeq(comm,p*m,&(*(x))->v) || (-1 == ((*(x))->n = (m)))) 495d59c15a7SBarry Smith #define VecsCreateSeqWithArray(comm,p,m,a,x) (PetscNew(struct _p_Vecs,x) || VecCreateSeqWithArray(comm,p*m,a,&(*(x))->v) || (-1 == ((*(x))->n = (m)))) 496d59c15a7SBarry Smith #define VecsDuplicate(x,y) (PetscNew(struct _p_Vecs,y) || VecDuplicate(x->v,&(*(y))->v) || (-1 == ((*(y))->n = (x)->n))) 497e9fa29b7SSatish Balay 498e9fa29b7SSatish Balay 499e9fa29b7SSatish Balay PETSC_EXTERN_CXX_END 5002eac72dbSBarry Smith #endif 501