xref: /petsc/include/petscvec.h (revision deeb6e728995698b52ce34937beef847f8aebfff)
173f4d377SMatthew Knepley /* $Id: petscvec.h,v 1.127 2001/09/11 16:31:30 bsmith Exp $ */
22eac72dbSBarry Smith /*
337f753daSBarry Smith     Defines the vector component of PETSc. Vectors generally represent
437f753daSBarry Smith   degrees of freedom for finite element/finite difference functions
584cb2905SBarry Smith   on a grid. They have more mathematical structure then simple arrays.
62eac72dbSBarry Smith */
72eac72dbSBarry Smith 
80a835dfdSSatish Balay #ifndef __PETSCVEC_H
90a835dfdSSatish Balay #define __PETSCVEC_H
100a835dfdSSatish Balay #include "petscis.h"
110a835dfdSSatish Balay #include "petscsys.h"
122eac72dbSBarry Smith 
139e25ed09SBarry Smith #define VEC_COOKIE         PETSC_COOKIE+3
1494d884c6SBarry Smith #define MAP_COOKIE         PETSC_COOKIE+22
159e25ed09SBarry Smith #define VEC_SCATTER_COOKIE PETSC_COOKIE+4
169e25ed09SBarry Smith 
1709321671SBarry Smith /*S
188a124369SBarry Smith      PetscMap - Abstract PETSc object that defines the layout of vector and
19013c094aSBarry Smith   matrices across processors
2009321671SBarry Smith 
2109321671SBarry Smith    Level: advanced
2209321671SBarry Smith 
2309321671SBarry Smith    Notes:
2409321671SBarry Smith     Does not play a role in the PETSc design, can be ignored
2509321671SBarry Smith 
2609321671SBarry Smith   Concepts: parallel decomposition
2709321671SBarry Smith 
288a124369SBarry Smith .seealso:  PetscMapCreateMPI()
2909321671SBarry Smith S*/
308a124369SBarry Smith typedef struct _p_PetscMap*         PetscMap;
3109321671SBarry Smith 
3209321671SBarry Smith /*S
3309321671SBarry Smith      Vec - Abstract PETSc vector object
3409321671SBarry Smith 
3509321671SBarry Smith    Level: beginner
3609321671SBarry Smith 
3709321671SBarry Smith   Concepts: field variables, unknowns, arrays
3809321671SBarry Smith 
3909321671SBarry Smith .seealso:  VecCreate(), VecType, VecSetType()
4009321671SBarry Smith S*/
41f09e8eb9SSatish Balay typedef struct _p_Vec*         Vec;
4209321671SBarry Smith 
4309321671SBarry Smith /*S
4409321671SBarry Smith      VecScatter - Object used to manage communication of data
4509321671SBarry Smith        between vectors in parallel. Manages both scatters and gathers
4609321671SBarry Smith 
4709321671SBarry Smith    Level: beginner
4809321671SBarry Smith 
4909321671SBarry Smith   Concepts: scatter
5009321671SBarry Smith 
5109321671SBarry Smith .seealso:  VecScatterCreate(), VecScatterBegin(), VecScatterEnd()
5209321671SBarry Smith S*/
53f09e8eb9SSatish Balay typedef struct _p_VecScatter*  VecScatter;
5409321671SBarry Smith 
5509321671SBarry Smith /*E
5609321671SBarry Smith     VecType - String with the name of a PETSc vector or the creation function
5709321671SBarry Smith        with an optional dynamic library name, for example
5809321671SBarry Smith        http://www.mcs.anl.gov/petsc/lib.a:myveccreate()
5909321671SBarry Smith 
6009321671SBarry Smith    Level: beginner
6109321671SBarry Smith 
6209321671SBarry Smith .seealso: VecSetType(), Vec
6309321671SBarry Smith E*/
643f1db9ecSBarry Smith #define VEC_SEQ         "seq"
653f1db9ecSBarry Smith #define VEC_MPI         "mpi"
661d1367b7SBarry Smith #define VEC_FETI        "feti"
673f1db9ecSBarry Smith #define VEC_SHARED      "shared"
68207e560cSBarry Smith #define VEC_ESI         "esi"
69ef66eb69SBarry Smith #define VEC_PETSCESI    "petscesi"
703f1db9ecSBarry Smith typedef char*  VecType;
712eac72dbSBarry Smith 
72ca44d042SBarry Smith EXTERN int VecCreateSeq(MPI_Comm,int,Vec*);
738a124369SBarry Smith EXTERN int PetscMapCreateMPI(MPI_Comm,int,int,PetscMap*);
74ca44d042SBarry Smith EXTERN int VecCreateMPI(MPI_Comm,int,int,Vec*);
75ea709b57SSatish Balay EXTERN int VecCreateSeqWithArray(MPI_Comm,int,const PetscScalar[],Vec*);
76ea709b57SSatish Balay EXTERN int VecCreateMPIWithArray(MPI_Comm,int,int,const PetscScalar[],Vec*);
77ca44d042SBarry Smith EXTERN int VecCreateShared(MPI_Comm,int,int,Vec*);
78ca44d042SBarry Smith EXTERN int VecCreate(MPI_Comm,int,int,Vec*);
79ca44d042SBarry Smith EXTERN int VecSetType(Vec,VecType);
80ca44d042SBarry Smith EXTERN int VecSetFromOptions(Vec);
812eac72dbSBarry Smith 
82ca44d042SBarry Smith EXTERN int VecDestroy(Vec);
834b0e389bSBarry Smith 
848a124369SBarry Smith EXTERN int PetscMapDestroy(PetscMap);
858a124369SBarry Smith EXTERN int PetscMapGetLocalSize(PetscMap,int *);
868a124369SBarry Smith EXTERN int PetscMapGetSize(PetscMap,int *);
878a124369SBarry Smith EXTERN int PetscMapGetLocalRange(PetscMap,int *,int *);
888a124369SBarry Smith EXTERN int PetscMapGetGlobalRange(PetscMap,int *[]);
8994d884c6SBarry Smith 
9087828ca2SBarry Smith EXTERN int VecDot(Vec,Vec,PetscScalar*);
9187828ca2SBarry Smith EXTERN int VecTDot(Vec,Vec,PetscScalar*);
9287828ca2SBarry Smith EXTERN int VecMDot(int,Vec,const Vec[],PetscScalar*);
9387828ca2SBarry Smith EXTERN int VecMTDot(int,Vec,const Vec[],PetscScalar*);
94cddf8d76SBarry Smith 
9509321671SBarry Smith /*E
9609321671SBarry Smith     NormType - determines what type of norm to compute
9709321671SBarry Smith 
9809321671SBarry Smith     Level: beginner
9909321671SBarry Smith 
10009321671SBarry Smith .seealso: VecNorm(), VecNormBegin(), VecNormEnd(), MatNorm()
10109321671SBarry Smith E*/
10293c39befSBarry Smith typedef enum {NORM_1=1,NORM_2=2,NORM_FROBENIUS=3,NORM_INFINITY=4,NORM_1_AND_2=5} NormType;
103cddf8d76SBarry Smith #define NORM_MAX NORM_INFINITY
10409321671SBarry Smith 
105b0a32e0cSBarry Smith EXTERN int VecNorm(Vec,NormType,PetscReal *);
10687828ca2SBarry Smith EXTERN int VecSum(Vec,PetscScalar*);
107b0a32e0cSBarry Smith EXTERN int VecMax(Vec,int*,PetscReal *);
108b0a32e0cSBarry Smith EXTERN int VecMin(Vec,int*,PetscReal *);
109ea709b57SSatish Balay EXTERN int VecScale(const PetscScalar *a,Vec v);
110ca44d042SBarry Smith EXTERN int VecCopy(Vec,Vec);
111ca44d042SBarry Smith EXTERN int VecSetRandom(PetscRandom,Vec);
112ea709b57SSatish Balay EXTERN int VecSet(const PetscScalar*,Vec);
113ca44d042SBarry Smith EXTERN int VecSwap(Vec,Vec);
114ea709b57SSatish Balay EXTERN int VecAXPY(const PetscScalar*,Vec,Vec);
115ea709b57SSatish Balay EXTERN int VecAXPBY(const PetscScalar*,const PetscScalar *,Vec,Vec);
116ea709b57SSatish Balay EXTERN int VecMAXPY(int,const PetscScalar*,Vec,Vec*);
117ea709b57SSatish Balay EXTERN int VecAYPX(const PetscScalar*,Vec,Vec);
118ea709b57SSatish Balay EXTERN int VecWAXPY(const PetscScalar*,Vec,Vec,Vec);
119ca44d042SBarry Smith EXTERN int VecPointwiseMult(Vec,Vec,Vec);
120ca44d042SBarry Smith EXTERN int VecPointwiseDivide(Vec,Vec,Vec);
121ea709b57SSatish Balay EXTERN int VecShift(const PetscScalar*,Vec);
122ca44d042SBarry Smith EXTERN int VecReciprocal(Vec);
123*deeb6e72SMatthew Knepley EXTERN int VecPermute(Vec, IS, PetscTruth);
124*deeb6e72SMatthew Knepley EXTERN int VecSqrt(Vec);
125ca44d042SBarry Smith EXTERN int VecAbs(Vec);
126ca44d042SBarry Smith EXTERN int VecDuplicate(Vec,Vec*);
127ca44d042SBarry Smith EXTERN int VecDuplicateVecs(Vec,int,Vec*[]);
128ca44d042SBarry Smith EXTERN int VecDestroyVecs(const Vec[],int);
1298a124369SBarry Smith EXTERN int VecGetPetscMap(Vec,PetscMap*);
1302eac72dbSBarry Smith 
13187828ca2SBarry Smith EXTERN int VecStrideNorm(Vec,int,NormType,PetscReal*);
132ca44d042SBarry Smith EXTERN int VecStrideGather(Vec,int,Vec,InsertMode);
133ca44d042SBarry Smith EXTERN int VecStrideScatter(Vec,int,Vec,InsertMode);
13487828ca2SBarry Smith EXTERN int VecStrideMax(Vec,int,int *,PetscReal *);
13587828ca2SBarry Smith EXTERN int VecStrideMin(Vec,int,int *,PetscReal *);
136ca44d042SBarry Smith EXTERN int VecStrideGatherAll(Vec,Vec*,InsertMode);
137ca44d042SBarry Smith EXTERN int VecStrideScatterAll(Vec*,Vec,InsertMode);
138d2655a18SBarry Smith 
139ea709b57SSatish Balay EXTERN int VecSetValues(Vec,int,const int[],const PetscScalar[],InsertMode);
140ca44d042SBarry Smith EXTERN int VecAssemblyBegin(Vec);
141ca44d042SBarry Smith EXTERN int VecAssemblyEnd(Vec);
142ca44d042SBarry Smith EXTERN int VecSetStashInitialSize(Vec,int,int);
143b0a32e0cSBarry Smith EXTERN int VecStashView(Vec,PetscViewer);
14462dc5420SSatish Balay 
145bdea15b1SBarry Smith #define VecSetValue(v,i,va,mode) 0;\
146ea709b57SSatish Balay {int _ierr,_row = i; PetscScalar _va = va; \
147b951964fSBarry Smith   _ierr = VecSetValues(v,1,&_row,&_va,mode);CHKERRQ(_ierr); \
148b951964fSBarry Smith }
149ca44d042SBarry Smith EXTERN int VecSetBlockSize(Vec,int);
150ca44d042SBarry Smith EXTERN int VecGetBlockSize(Vec,int*);
151ea709b57SSatish Balay EXTERN int VecSetValuesBlocked(Vec,int,const int[],const PetscScalar[],InsertMode);
1528ed539a5SBarry Smith 
1532bad1931SBarry Smith extern PetscTruth VecRegisterAllCalled;
154ca44d042SBarry Smith EXTERN int        VecRegisterAll(const char []);
155ca44d042SBarry Smith EXTERN int        VecRegister(const char[],const char[],const char[],int(*)(Vec));
156aa482453SBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES)
157f1af5d2fSBarry Smith #define VecRegisterDynamic(a,b,c,d) VecRegister(a,b,c,0)
15888d459dfSBarry Smith #else
159f1af5d2fSBarry Smith #define VecRegisterDynamic(a,b,c,d) VecRegister(a,b,c,d)
16088d459dfSBarry Smith #endif
16188d459dfSBarry Smith 
16209321671SBarry Smith 
163ca44d042SBarry Smith EXTERN int VecScatterCreate(Vec,IS,Vec,IS,VecScatter *);
164ca44d042SBarry Smith EXTERN int VecScatterPostRecvs(Vec,Vec,InsertMode,ScatterMode,VecScatter);
165ca44d042SBarry Smith EXTERN int VecScatterBegin(Vec,Vec,InsertMode,ScatterMode,VecScatter);
166ca44d042SBarry Smith EXTERN int VecScatterEnd(Vec,Vec,InsertMode,ScatterMode,VecScatter);
167ca44d042SBarry Smith EXTERN int VecScatterDestroy(VecScatter);
168ca44d042SBarry Smith EXTERN int VecScatterCopy(VecScatter,VecScatter *);
169b0a32e0cSBarry Smith EXTERN int VecScatterView(VecScatter,PetscViewer);
170ca44d042SBarry Smith EXTERN int VecScatterRemap(VecScatter,int *,int*);
1712195c698SBarry Smith 
172cb5b572fSBarry Smith typedef enum {PIPELINE_DOWN=0,PIPELINE_UP=1} PipelineDirection;
173cb5b572fSBarry Smith typedef enum {PIPELINE_NONE=1,PIPELINE_SEQUENTIAL=2,
1748ea6152fSSatish Balay 	      PIPELINE_REDBLACK=3,PIPELINE_MULTICOLOR=4} PipelineType;
175cb5b572fSBarry Smith 
176cb5b572fSBarry Smith typedef struct _p_VecPipeline*  VecPipeline;
177cb5b572fSBarry Smith 
178ca44d042SBarry Smith EXTERN int VecPipelineCreate(MPI_Comm,Vec,IS,Vec,IS,VecPipeline *);
179ca44d042SBarry Smith EXTERN int VecPipelineSetType(VecPipeline,PipelineType,PetscObject);
180ca44d042SBarry Smith EXTERN int VecPipelineSetup(VecPipeline);
181ca44d042SBarry Smith EXTERN int VecPipelineBegin(Vec,Vec,InsertMode,ScatterMode,PipelineDirection,VecPipeline);
182ca44d042SBarry Smith EXTERN int VecPipelineEnd(Vec,Vec,InsertMode,ScatterMode,PipelineDirection,VecPipeline);
183b0a32e0cSBarry Smith EXTERN int VecPipelineView(VecPipeline,PetscViewer);
184ca44d042SBarry Smith EXTERN int VecPipelineDestroy(VecPipeline);
185cb5b572fSBarry Smith 
18687828ca2SBarry Smith EXTERN int VecGetArray(Vec,PetscScalar*[]);
18787828ca2SBarry Smith EXTERN int VecRestoreArray(Vec,PetscScalar*[]);
18887828ca2SBarry Smith EXTERN int VecGetArray4d(Vec,int,int,int,int,int,int,int,int,PetscScalar****[]);
18987828ca2SBarry Smith EXTERN int VecRestoreArray4d(Vec,int,int,int,int,int,int,int,int,PetscScalar****[]);
19087828ca2SBarry Smith EXTERN int VecGetArray3d(Vec,int,int,int,int,int,int,PetscScalar***[]);
19187828ca2SBarry Smith EXTERN int VecRestoreArray3d(Vec,int,int,int,int,int,int,PetscScalar***[]);
19287828ca2SBarry Smith EXTERN int VecGetArray2d(Vec,int,int,int,int,PetscScalar**[]);
19387828ca2SBarry Smith EXTERN int VecRestoreArray2d(Vec,int,int,int,int,PetscScalar**[]);
19487828ca2SBarry Smith EXTERN int VecGetArray1d(Vec,int,int,PetscScalar *[]);
19587828ca2SBarry Smith EXTERN int VecRestoreArray1d(Vec,int,int,PetscScalar *[]);
196ab360428SBarry Smith 
197ea709b57SSatish Balay EXTERN int VecPlaceArray(Vec,const PetscScalar[]);
198b0a32e0cSBarry Smith EXTERN int VecResetArray(Vec);
199ea709b57SSatish Balay EXTERN int VecReplaceArray(Vec,const PetscScalar[]);
20087828ca2SBarry Smith EXTERN int VecGetArrays(const Vec[],int,PetscScalar**[]);
20187828ca2SBarry Smith EXTERN int VecRestoreArrays(const Vec[],int,PetscScalar**[]);
20284cb2905SBarry Smith 
203ca44d042SBarry Smith EXTERN int VecValid(Vec,PetscTruth*);
204b0a32e0cSBarry Smith EXTERN int VecView(Vec,PetscViewer);
205ca44d042SBarry Smith EXTERN int VecEqual(Vec,Vec,PetscTruth*);
206b0a32e0cSBarry Smith EXTERN int VecLoad(PetscViewer,Vec*);
207b0a32e0cSBarry Smith EXTERN int VecLoadIntoVector(PetscViewer,Vec);
2088ed539a5SBarry Smith 
209ca44d042SBarry Smith EXTERN int VecGetSize(Vec,int*);
210ca44d042SBarry Smith EXTERN int VecGetType(Vec,VecType*);
211ca44d042SBarry Smith EXTERN int VecGetLocalSize(Vec,int*);
212ca44d042SBarry Smith EXTERN int VecGetOwnershipRange(Vec,int*,int*);
2138ed539a5SBarry Smith 
214ca44d042SBarry Smith EXTERN int VecSetLocalToGlobalMapping(Vec,ISLocalToGlobalMapping);
215ea709b57SSatish Balay EXTERN int VecSetValuesLocal(Vec,int,const int[],const PetscScalar[],InsertMode);
216323b833fSBarry Smith EXTERN int VecSetLocalToGlobalMappingBlock(Vec,ISLocalToGlobalMapping);
217ea709b57SSatish Balay EXTERN int VecSetValuesBlockedLocal(Vec,int,const int[],const PetscScalar[],InsertMode);
21890f02eecSBarry Smith 
21987828ca2SBarry Smith EXTERN int VecDotBegin(Vec,Vec,PetscScalar *);
22087828ca2SBarry Smith EXTERN int VecDotEnd(Vec,Vec,PetscScalar *);
22187828ca2SBarry Smith EXTERN int VecTDotBegin(Vec,Vec,PetscScalar *);
22287828ca2SBarry Smith EXTERN int VecTDotEnd(Vec,Vec,PetscScalar *);
22387828ca2SBarry Smith EXTERN int VecNormBegin(Vec,NormType,PetscReal *);
22487828ca2SBarry Smith EXTERN int VecNormEnd(Vec,NormType,PetscReal *);
225d3c178dbSBarry Smith 
226fdbc4c26SBarry Smith typedef enum {VEC_IGNORE_OFF_PROC_ENTRIES,VEC_TREAT_OFF_PROC_ENTRIES} VecOption;
227ca44d042SBarry Smith EXTERN int VecSetOption(Vec,VecOption);
22890f02eecSBarry Smith 
22987828ca2SBarry Smith EXTERN int VecContourScale(Vec,PetscReal,PetscReal);
230522c5e43SBarry Smith 
23115091d37SBarry Smith /*
23215091d37SBarry Smith     These numbers need to match the entries in
23315091d37SBarry Smith   the function table in src/vec/vecimpl.h
23415091d37SBarry Smith */
235b1bcba4aSBarry Smith typedef enum { VECOP_VIEW = 32,
236b1bcba4aSBarry Smith                VECOP_LOADINTOVECTOR = 38
23715091d37SBarry Smith              } VecOperation;
23837bd1cefSSatish Balay EXTERN int VecSetOperation(Vec,VecOperation,void(*)());
239b19c1e4cSBarry Smith 
240e182c471SBarry Smith /*
241e182c471SBarry Smith      Routines for dealing with ghosted vectors:
242e182c471SBarry Smith   vectors with ghost elements at the end of the array.
243e182c471SBarry Smith */
244ca44d042SBarry Smith EXTERN int VecCreateGhost(MPI_Comm,int,int,int,const int[],Vec*);
245ea709b57SSatish Balay EXTERN int VecCreateGhostWithArray(MPI_Comm,int,int,int,const int[],const PetscScalar[],Vec*);
246ca44d042SBarry Smith EXTERN int VecCreateGhostBlock(MPI_Comm,int,int,int,int,const int[],Vec*);
247ea709b57SSatish Balay EXTERN int VecCreateGhostBlockWithArray(MPI_Comm,int,int,int,int,const int[],const PetscScalar[],Vec*);
248ca44d042SBarry Smith EXTERN int VecGhostGetLocalForm(Vec,Vec*);
249ca44d042SBarry Smith EXTERN int VecGhostRestoreLocalForm(Vec,Vec*);
250ca44d042SBarry Smith EXTERN int VecGhostUpdateBegin(Vec,InsertMode,ScatterMode);
251ca44d042SBarry Smith EXTERN int VecGhostUpdateEnd(Vec,InsertMode,ScatterMode);
252e182c471SBarry Smith 
2537b200f87SKris Buschelman EXTERN int VecConjugate(Vec);
25434233285SBarry Smith 
255bba1ac68SSatish Balay EXTERN int VecConvertMPIToSeqAll(Vec vin,Vec *vout);
256bba1ac68SSatish Balay EXTERN int VecConvertMPIToMPIZero(Vec vin,Vec *vout);
257bba1ac68SSatish Balay 
258bba1ac68SSatish Balay 
259bba1ac68SSatish Balay EXTERN int VecESISetType(Vec,char*);
260bba1ac68SSatish Balay EXTERN int VecESISetFromOptions(Vec);
261bba1ac68SSatish Balay 
2622eac72dbSBarry Smith #endif
2632eac72dbSBarry Smith 
2642eac72dbSBarry Smith 
2657588ac45SBarry Smith 
26609321671SBarry Smith 
26709321671SBarry Smith 
26809321671SBarry Smith 
26909321671SBarry Smith 
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27109321671SBarry Smith 
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