173f4d377SMatthew Knepley /* $Id: petscvec.h,v 1.127 2001/09/11 16:31:30 bsmith Exp $ */ 22eac72dbSBarry Smith /* 337f753daSBarry Smith Defines the vector component of PETSc. Vectors generally represent 437f753daSBarry Smith degrees of freedom for finite element/finite difference functions 584cb2905SBarry Smith on a grid. They have more mathematical structure then simple arrays. 62eac72dbSBarry Smith */ 72eac72dbSBarry Smith 80a835dfdSSatish Balay #ifndef __PETSCVEC_H 90a835dfdSSatish Balay #define __PETSCVEC_H 100a835dfdSSatish Balay #include "petscis.h" 110a835dfdSSatish Balay #include "petscsys.h" 122eac72dbSBarry Smith 139e25ed09SBarry Smith #define VEC_COOKIE PETSC_COOKIE+3 1494d884c6SBarry Smith #define MAP_COOKIE PETSC_COOKIE+22 159e25ed09SBarry Smith #define VEC_SCATTER_COOKIE PETSC_COOKIE+4 169e25ed09SBarry Smith 1709321671SBarry Smith /*S 188a124369SBarry Smith PetscMap - Abstract PETSc object that defines the layout of vector and 19013c094aSBarry Smith matrices across processors 2009321671SBarry Smith 2109321671SBarry Smith Level: advanced 2209321671SBarry Smith 2309321671SBarry Smith Notes: 2409321671SBarry Smith Does not play a role in the PETSc design, can be ignored 2509321671SBarry Smith 2609321671SBarry Smith Concepts: parallel decomposition 2709321671SBarry Smith 288a124369SBarry Smith .seealso: PetscMapCreateMPI() 2909321671SBarry Smith S*/ 308a124369SBarry Smith typedef struct _p_PetscMap* PetscMap; 3109321671SBarry Smith 3209321671SBarry Smith /*S 3309321671SBarry Smith Vec - Abstract PETSc vector object 3409321671SBarry Smith 3509321671SBarry Smith Level: beginner 3609321671SBarry Smith 3709321671SBarry Smith Concepts: field variables, unknowns, arrays 3809321671SBarry Smith 3909321671SBarry Smith .seealso: VecCreate(), VecType, VecSetType() 4009321671SBarry Smith S*/ 41f09e8eb9SSatish Balay typedef struct _p_Vec* Vec; 4209321671SBarry Smith 4309321671SBarry Smith /*S 4409321671SBarry Smith VecScatter - Object used to manage communication of data 4509321671SBarry Smith between vectors in parallel. Manages both scatters and gathers 4609321671SBarry Smith 4709321671SBarry Smith Level: beginner 4809321671SBarry Smith 4909321671SBarry Smith Concepts: scatter 5009321671SBarry Smith 5109321671SBarry Smith .seealso: VecScatterCreate(), VecScatterBegin(), VecScatterEnd() 5209321671SBarry Smith S*/ 53f09e8eb9SSatish Balay typedef struct _p_VecScatter* VecScatter; 5409321671SBarry Smith 5509321671SBarry Smith /*E 5609321671SBarry Smith VecType - String with the name of a PETSc vector or the creation function 5709321671SBarry Smith with an optional dynamic library name, for example 5809321671SBarry Smith http://www.mcs.anl.gov/petsc/lib.a:myveccreate() 5909321671SBarry Smith 6009321671SBarry Smith Level: beginner 6109321671SBarry Smith 6209321671SBarry Smith .seealso: VecSetType(), Vec 6309321671SBarry Smith E*/ 643f1db9ecSBarry Smith #define VEC_SEQ "seq" 653f1db9ecSBarry Smith #define VEC_MPI "mpi" 661d1367b7SBarry Smith #define VEC_FETI "feti" 673f1db9ecSBarry Smith #define VEC_SHARED "shared" 68207e560cSBarry Smith #define VEC_ESI "esi" 69ef66eb69SBarry Smith #define VEC_PETSCESI "petscesi" 703f1db9ecSBarry Smith typedef char* VecType; 712eac72dbSBarry Smith 72ca44d042SBarry Smith EXTERN int VecCreateSeq(MPI_Comm,int,Vec*); 738a124369SBarry Smith EXTERN int PetscMapCreateMPI(MPI_Comm,int,int,PetscMap*); 74ca44d042SBarry Smith EXTERN int VecCreateMPI(MPI_Comm,int,int,Vec*); 75ea709b57SSatish Balay EXTERN int VecCreateSeqWithArray(MPI_Comm,int,const PetscScalar[],Vec*); 76ea709b57SSatish Balay EXTERN int VecCreateMPIWithArray(MPI_Comm,int,int,const PetscScalar[],Vec*); 77ca44d042SBarry Smith EXTERN int VecCreateShared(MPI_Comm,int,int,Vec*); 78ca44d042SBarry Smith EXTERN int VecCreate(MPI_Comm,int,int,Vec*); 79ca44d042SBarry Smith EXTERN int VecSetType(Vec,VecType); 80ca44d042SBarry Smith EXTERN int VecSetFromOptions(Vec); 812eac72dbSBarry Smith 82ca44d042SBarry Smith EXTERN int VecDestroy(Vec); 834b0e389bSBarry Smith 848a124369SBarry Smith EXTERN int PetscMapDestroy(PetscMap); 858a124369SBarry Smith EXTERN int PetscMapGetLocalSize(PetscMap,int *); 868a124369SBarry Smith EXTERN int PetscMapGetSize(PetscMap,int *); 878a124369SBarry Smith EXTERN int PetscMapGetLocalRange(PetscMap,int *,int *); 888a124369SBarry Smith EXTERN int PetscMapGetGlobalRange(PetscMap,int *[]); 8994d884c6SBarry Smith 9087828ca2SBarry Smith EXTERN int VecDot(Vec,Vec,PetscScalar*); 9187828ca2SBarry Smith EXTERN int VecTDot(Vec,Vec,PetscScalar*); 9287828ca2SBarry Smith EXTERN int VecMDot(int,Vec,const Vec[],PetscScalar*); 9387828ca2SBarry Smith EXTERN int VecMTDot(int,Vec,const Vec[],PetscScalar*); 94cddf8d76SBarry Smith 9509321671SBarry Smith /*E 9609321671SBarry Smith NormType - determines what type of norm to compute 9709321671SBarry Smith 9809321671SBarry Smith Level: beginner 9909321671SBarry Smith 10009321671SBarry Smith .seealso: VecNorm(), VecNormBegin(), VecNormEnd(), MatNorm() 10109321671SBarry Smith E*/ 10293c39befSBarry Smith typedef enum {NORM_1=1,NORM_2=2,NORM_FROBENIUS=3,NORM_INFINITY=4,NORM_1_AND_2=5} NormType; 103cddf8d76SBarry Smith #define NORM_MAX NORM_INFINITY 10409321671SBarry Smith 105b0a32e0cSBarry Smith EXTERN int VecNorm(Vec,NormType,PetscReal *); 10687828ca2SBarry Smith EXTERN int VecSum(Vec,PetscScalar*); 107b0a32e0cSBarry Smith EXTERN int VecMax(Vec,int*,PetscReal *); 108b0a32e0cSBarry Smith EXTERN int VecMin(Vec,int*,PetscReal *); 109ea709b57SSatish Balay EXTERN int VecScale(const PetscScalar *a,Vec v); 110ca44d042SBarry Smith EXTERN int VecCopy(Vec,Vec); 111ca44d042SBarry Smith EXTERN int VecSetRandom(PetscRandom,Vec); 112ea709b57SSatish Balay EXTERN int VecSet(const PetscScalar*,Vec); 113ca44d042SBarry Smith EXTERN int VecSwap(Vec,Vec); 114ea709b57SSatish Balay EXTERN int VecAXPY(const PetscScalar*,Vec,Vec); 115ea709b57SSatish Balay EXTERN int VecAXPBY(const PetscScalar*,const PetscScalar *,Vec,Vec); 116ea709b57SSatish Balay EXTERN int VecMAXPY(int,const PetscScalar*,Vec,Vec*); 117ea709b57SSatish Balay EXTERN int VecAYPX(const PetscScalar*,Vec,Vec); 118ea709b57SSatish Balay EXTERN int VecWAXPY(const PetscScalar*,Vec,Vec,Vec); 119ca44d042SBarry Smith EXTERN int VecPointwiseMult(Vec,Vec,Vec); 120ca44d042SBarry Smith EXTERN int VecPointwiseDivide(Vec,Vec,Vec); 121ea709b57SSatish Balay EXTERN int VecShift(const PetscScalar*,Vec); 122ca44d042SBarry Smith EXTERN int VecReciprocal(Vec); 123*deeb6e72SMatthew Knepley EXTERN int VecPermute(Vec, IS, PetscTruth); 124*deeb6e72SMatthew Knepley EXTERN int VecSqrt(Vec); 125ca44d042SBarry Smith EXTERN int VecAbs(Vec); 126ca44d042SBarry Smith EXTERN int VecDuplicate(Vec,Vec*); 127ca44d042SBarry Smith EXTERN int VecDuplicateVecs(Vec,int,Vec*[]); 128ca44d042SBarry Smith EXTERN int VecDestroyVecs(const Vec[],int); 1298a124369SBarry Smith EXTERN int VecGetPetscMap(Vec,PetscMap*); 1302eac72dbSBarry Smith 13187828ca2SBarry Smith EXTERN int VecStrideNorm(Vec,int,NormType,PetscReal*); 132ca44d042SBarry Smith EXTERN int VecStrideGather(Vec,int,Vec,InsertMode); 133ca44d042SBarry Smith EXTERN int VecStrideScatter(Vec,int,Vec,InsertMode); 13487828ca2SBarry Smith EXTERN int VecStrideMax(Vec,int,int *,PetscReal *); 13587828ca2SBarry Smith EXTERN int VecStrideMin(Vec,int,int *,PetscReal *); 136ca44d042SBarry Smith EXTERN int VecStrideGatherAll(Vec,Vec*,InsertMode); 137ca44d042SBarry Smith EXTERN int VecStrideScatterAll(Vec*,Vec,InsertMode); 138d2655a18SBarry Smith 139ea709b57SSatish Balay EXTERN int VecSetValues(Vec,int,const int[],const PetscScalar[],InsertMode); 140ca44d042SBarry Smith EXTERN int VecAssemblyBegin(Vec); 141ca44d042SBarry Smith EXTERN int VecAssemblyEnd(Vec); 142ca44d042SBarry Smith EXTERN int VecSetStashInitialSize(Vec,int,int); 143b0a32e0cSBarry Smith EXTERN int VecStashView(Vec,PetscViewer); 14462dc5420SSatish Balay 145bdea15b1SBarry Smith #define VecSetValue(v,i,va,mode) 0;\ 146ea709b57SSatish Balay {int _ierr,_row = i; PetscScalar _va = va; \ 147b951964fSBarry Smith _ierr = VecSetValues(v,1,&_row,&_va,mode);CHKERRQ(_ierr); \ 148b951964fSBarry Smith } 149ca44d042SBarry Smith EXTERN int VecSetBlockSize(Vec,int); 150ca44d042SBarry Smith EXTERN int VecGetBlockSize(Vec,int*); 151ea709b57SSatish Balay EXTERN int VecSetValuesBlocked(Vec,int,const int[],const PetscScalar[],InsertMode); 1528ed539a5SBarry Smith 1532bad1931SBarry Smith extern PetscTruth VecRegisterAllCalled; 154ca44d042SBarry Smith EXTERN int VecRegisterAll(const char []); 155ca44d042SBarry Smith EXTERN int VecRegister(const char[],const char[],const char[],int(*)(Vec)); 156aa482453SBarry Smith #if defined(PETSC_USE_DYNAMIC_LIBRARIES) 157f1af5d2fSBarry Smith #define VecRegisterDynamic(a,b,c,d) VecRegister(a,b,c,0) 15888d459dfSBarry Smith #else 159f1af5d2fSBarry Smith #define VecRegisterDynamic(a,b,c,d) VecRegister(a,b,c,d) 16088d459dfSBarry Smith #endif 16188d459dfSBarry Smith 16209321671SBarry Smith 163ca44d042SBarry Smith EXTERN int VecScatterCreate(Vec,IS,Vec,IS,VecScatter *); 164ca44d042SBarry Smith EXTERN int VecScatterPostRecvs(Vec,Vec,InsertMode,ScatterMode,VecScatter); 165ca44d042SBarry Smith EXTERN int VecScatterBegin(Vec,Vec,InsertMode,ScatterMode,VecScatter); 166ca44d042SBarry Smith EXTERN int VecScatterEnd(Vec,Vec,InsertMode,ScatterMode,VecScatter); 167ca44d042SBarry Smith EXTERN int VecScatterDestroy(VecScatter); 168ca44d042SBarry Smith EXTERN int VecScatterCopy(VecScatter,VecScatter *); 169b0a32e0cSBarry Smith EXTERN int VecScatterView(VecScatter,PetscViewer); 170ca44d042SBarry Smith EXTERN int VecScatterRemap(VecScatter,int *,int*); 1712195c698SBarry Smith 172cb5b572fSBarry Smith typedef enum {PIPELINE_DOWN=0,PIPELINE_UP=1} PipelineDirection; 173cb5b572fSBarry Smith typedef enum {PIPELINE_NONE=1,PIPELINE_SEQUENTIAL=2, 1748ea6152fSSatish Balay PIPELINE_REDBLACK=3,PIPELINE_MULTICOLOR=4} PipelineType; 175cb5b572fSBarry Smith 176cb5b572fSBarry Smith typedef struct _p_VecPipeline* VecPipeline; 177cb5b572fSBarry Smith 178ca44d042SBarry Smith EXTERN int VecPipelineCreate(MPI_Comm,Vec,IS,Vec,IS,VecPipeline *); 179ca44d042SBarry Smith EXTERN int VecPipelineSetType(VecPipeline,PipelineType,PetscObject); 180ca44d042SBarry Smith EXTERN int VecPipelineSetup(VecPipeline); 181ca44d042SBarry Smith EXTERN int VecPipelineBegin(Vec,Vec,InsertMode,ScatterMode,PipelineDirection,VecPipeline); 182ca44d042SBarry Smith EXTERN int VecPipelineEnd(Vec,Vec,InsertMode,ScatterMode,PipelineDirection,VecPipeline); 183b0a32e0cSBarry Smith EXTERN int VecPipelineView(VecPipeline,PetscViewer); 184ca44d042SBarry Smith EXTERN int VecPipelineDestroy(VecPipeline); 185cb5b572fSBarry Smith 18687828ca2SBarry Smith EXTERN int VecGetArray(Vec,PetscScalar*[]); 18787828ca2SBarry Smith EXTERN int VecRestoreArray(Vec,PetscScalar*[]); 18887828ca2SBarry Smith EXTERN int VecGetArray4d(Vec,int,int,int,int,int,int,int,int,PetscScalar****[]); 18987828ca2SBarry Smith EXTERN int VecRestoreArray4d(Vec,int,int,int,int,int,int,int,int,PetscScalar****[]); 19087828ca2SBarry Smith EXTERN int VecGetArray3d(Vec,int,int,int,int,int,int,PetscScalar***[]); 19187828ca2SBarry Smith EXTERN int VecRestoreArray3d(Vec,int,int,int,int,int,int,PetscScalar***[]); 19287828ca2SBarry Smith EXTERN int VecGetArray2d(Vec,int,int,int,int,PetscScalar**[]); 19387828ca2SBarry Smith EXTERN int VecRestoreArray2d(Vec,int,int,int,int,PetscScalar**[]); 19487828ca2SBarry Smith EXTERN int VecGetArray1d(Vec,int,int,PetscScalar *[]); 19587828ca2SBarry Smith EXTERN int VecRestoreArray1d(Vec,int,int,PetscScalar *[]); 196ab360428SBarry Smith 197ea709b57SSatish Balay EXTERN int VecPlaceArray(Vec,const PetscScalar[]); 198b0a32e0cSBarry Smith EXTERN int VecResetArray(Vec); 199ea709b57SSatish Balay EXTERN int VecReplaceArray(Vec,const PetscScalar[]); 20087828ca2SBarry Smith EXTERN int VecGetArrays(const Vec[],int,PetscScalar**[]); 20187828ca2SBarry Smith EXTERN int VecRestoreArrays(const Vec[],int,PetscScalar**[]); 20284cb2905SBarry Smith 203ca44d042SBarry Smith EXTERN int VecValid(Vec,PetscTruth*); 204b0a32e0cSBarry Smith EXTERN int VecView(Vec,PetscViewer); 205ca44d042SBarry Smith EXTERN int VecEqual(Vec,Vec,PetscTruth*); 206b0a32e0cSBarry Smith EXTERN int VecLoad(PetscViewer,Vec*); 207b0a32e0cSBarry Smith EXTERN int VecLoadIntoVector(PetscViewer,Vec); 2088ed539a5SBarry Smith 209ca44d042SBarry Smith EXTERN int VecGetSize(Vec,int*); 210ca44d042SBarry Smith EXTERN int VecGetType(Vec,VecType*); 211ca44d042SBarry Smith EXTERN int VecGetLocalSize(Vec,int*); 212ca44d042SBarry Smith EXTERN int VecGetOwnershipRange(Vec,int*,int*); 2138ed539a5SBarry Smith 214ca44d042SBarry Smith EXTERN int VecSetLocalToGlobalMapping(Vec,ISLocalToGlobalMapping); 215ea709b57SSatish Balay EXTERN int VecSetValuesLocal(Vec,int,const int[],const PetscScalar[],InsertMode); 216323b833fSBarry Smith EXTERN int VecSetLocalToGlobalMappingBlock(Vec,ISLocalToGlobalMapping); 217ea709b57SSatish Balay EXTERN int VecSetValuesBlockedLocal(Vec,int,const int[],const PetscScalar[],InsertMode); 21890f02eecSBarry Smith 21987828ca2SBarry Smith EXTERN int VecDotBegin(Vec,Vec,PetscScalar *); 22087828ca2SBarry Smith EXTERN int VecDotEnd(Vec,Vec,PetscScalar *); 22187828ca2SBarry Smith EXTERN int VecTDotBegin(Vec,Vec,PetscScalar *); 22287828ca2SBarry Smith EXTERN int VecTDotEnd(Vec,Vec,PetscScalar *); 22387828ca2SBarry Smith EXTERN int VecNormBegin(Vec,NormType,PetscReal *); 22487828ca2SBarry Smith EXTERN int VecNormEnd(Vec,NormType,PetscReal *); 225d3c178dbSBarry Smith 226fdbc4c26SBarry Smith typedef enum {VEC_IGNORE_OFF_PROC_ENTRIES,VEC_TREAT_OFF_PROC_ENTRIES} VecOption; 227ca44d042SBarry Smith EXTERN int VecSetOption(Vec,VecOption); 22890f02eecSBarry Smith 22987828ca2SBarry Smith EXTERN int VecContourScale(Vec,PetscReal,PetscReal); 230522c5e43SBarry Smith 23115091d37SBarry Smith /* 23215091d37SBarry Smith These numbers need to match the entries in 23315091d37SBarry Smith the function table in src/vec/vecimpl.h 23415091d37SBarry Smith */ 235b1bcba4aSBarry Smith typedef enum { VECOP_VIEW = 32, 236b1bcba4aSBarry Smith VECOP_LOADINTOVECTOR = 38 23715091d37SBarry Smith } VecOperation; 23837bd1cefSSatish Balay EXTERN int VecSetOperation(Vec,VecOperation,void(*)()); 239b19c1e4cSBarry Smith 240e182c471SBarry Smith /* 241e182c471SBarry Smith Routines for dealing with ghosted vectors: 242e182c471SBarry Smith vectors with ghost elements at the end of the array. 243e182c471SBarry Smith */ 244ca44d042SBarry Smith EXTERN int VecCreateGhost(MPI_Comm,int,int,int,const int[],Vec*); 245ea709b57SSatish Balay EXTERN int VecCreateGhostWithArray(MPI_Comm,int,int,int,const int[],const PetscScalar[],Vec*); 246ca44d042SBarry Smith EXTERN int VecCreateGhostBlock(MPI_Comm,int,int,int,int,const int[],Vec*); 247ea709b57SSatish Balay EXTERN int VecCreateGhostBlockWithArray(MPI_Comm,int,int,int,int,const int[],const PetscScalar[],Vec*); 248ca44d042SBarry Smith EXTERN int VecGhostGetLocalForm(Vec,Vec*); 249ca44d042SBarry Smith EXTERN int VecGhostRestoreLocalForm(Vec,Vec*); 250ca44d042SBarry Smith EXTERN int VecGhostUpdateBegin(Vec,InsertMode,ScatterMode); 251ca44d042SBarry Smith EXTERN int VecGhostUpdateEnd(Vec,InsertMode,ScatterMode); 252e182c471SBarry Smith 2537b200f87SKris Buschelman EXTERN int VecConjugate(Vec); 25434233285SBarry Smith 255bba1ac68SSatish Balay EXTERN int VecConvertMPIToSeqAll(Vec vin,Vec *vout); 256bba1ac68SSatish Balay EXTERN int VecConvertMPIToMPIZero(Vec vin,Vec *vout); 257bba1ac68SSatish Balay 258bba1ac68SSatish Balay 259bba1ac68SSatish Balay EXTERN int VecESISetType(Vec,char*); 260bba1ac68SSatish Balay EXTERN int VecESISetFromOptions(Vec); 261bba1ac68SSatish Balay 2622eac72dbSBarry Smith #endif 2632eac72dbSBarry Smith 2642eac72dbSBarry Smith 2657588ac45SBarry Smith 26609321671SBarry Smith 26709321671SBarry Smith 26809321671SBarry Smith 26909321671SBarry Smith 27009321671SBarry Smith 27109321671SBarry Smith 272