xref: /petsc/include/petscvec.h (revision f9558f5cfdb2a0bba47ae047cb39a904cf6f17eb)
12eac72dbSBarry Smith /*
237f753daSBarry Smith     Defines the vector component of PETSc. Vectors generally represent
337f753daSBarry Smith   degrees of freedom for finite element/finite difference functions
484cb2905SBarry Smith   on a grid. They have more mathematical structure then simple arrays.
52eac72dbSBarry Smith */
62eac72dbSBarry Smith 
797929ea7SJunchao Zhang #if !defined(PETSCVEC_H)
826bd1501SBarry Smith #define PETSCVEC_H
997929ea7SJunchao Zhang #include <petscsys.h>
1097929ea7SJunchao Zhang #include <petscsftypes.h> /* for VecScatter, VecScatterType */
112c8e378dSBarry Smith #include <petscis.h>
12030f984aSJacob Faibussowitsch #include <petscdevicetypes.h>
13665c2dedSJed Brown #include <petscviewer.h>
142eac72dbSBarry Smith 
1509321671SBarry Smith /*S
1609321671SBarry Smith      Vec - Abstract PETSc vector object
1709321671SBarry Smith 
1809321671SBarry Smith    Level: beginner
1909321671SBarry Smith 
2009321671SBarry Smith .seealso:  VecCreate(), VecType, VecSetType()
2109321671SBarry Smith S*/
22f09e8eb9SSatish Balay typedef struct _p_Vec*         Vec;
2309321671SBarry Smith 
2409321671SBarry Smith /*E
25398c84b2SBarry Smith   ScatterMode - Determines the direction of a scatter
26398c84b2SBarry Smith 
27398c84b2SBarry Smith   Level: beginner
28398c84b2SBarry Smith 
29398c84b2SBarry Smith .seealso: VecScatter, VecScatterBegin(), VecScatterEnd()
30398c84b2SBarry Smith E*/
31398c84b2SBarry Smith typedef enum {SCATTER_FORWARD=0, SCATTER_REVERSE=1, SCATTER_FORWARD_LOCAL=2, SCATTER_REVERSE_LOCAL=3, SCATTER_LOCAL=2} ScatterMode;
32398c84b2SBarry Smith 
33398c84b2SBarry Smith /*MC
34130e142eSJunchao Zhang     SCATTER_FORWARD - Scatters the values as dictated by the VecScatterCreate() call
35398c84b2SBarry Smith 
36398c84b2SBarry Smith     Level: beginner
37398c84b2SBarry Smith 
38130e142eSJunchao Zhang .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_REVERSE, SCATTER_FORWARD_LOCAL,
39398c84b2SBarry Smith           SCATTER_REVERSE_LOCAL
40398c84b2SBarry Smith 
41398c84b2SBarry Smith M*/
42398c84b2SBarry Smith 
43398c84b2SBarry Smith /*MC
44398c84b2SBarry Smith     SCATTER_REVERSE - Moves the values in the opposite direction then the directions indicated in
45130e142eSJunchao Zhang          in the VecScatterCreate()
46398c84b2SBarry Smith 
47398c84b2SBarry Smith     Level: beginner
48398c84b2SBarry Smith 
49130e142eSJunchao Zhang .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_FORWARD, SCATTER_FORWARD_LOCAL,
50398c84b2SBarry Smith           SCATTER_REVERSE_LOCAL
51398c84b2SBarry Smith 
52398c84b2SBarry Smith M*/
53398c84b2SBarry Smith 
54398c84b2SBarry Smith /*MC
55130e142eSJunchao Zhang     SCATTER_FORWARD_LOCAL - Scatters the values as dictated by the VecScatterCreate() call except NO parallel communication
56398c84b2SBarry Smith        is done. Any variables that have be moved between processes are ignored
57398c84b2SBarry Smith 
58398c84b2SBarry Smith     Level: developer
59398c84b2SBarry Smith 
60130e142eSJunchao Zhang .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_REVERSE, SCATTER_FORWARD,
61398c84b2SBarry Smith           SCATTER_REVERSE_LOCAL
62398c84b2SBarry Smith 
63398c84b2SBarry Smith M*/
64398c84b2SBarry Smith 
65398c84b2SBarry Smith /*MC
66398c84b2SBarry Smith     SCATTER_REVERSE_LOCAL - Moves the values in the opposite direction then the directions indicated in
67130e142eSJunchao Zhang          in the VecScatterCreate()  except NO parallel communication
68398c84b2SBarry Smith        is done. Any variables that have be moved between processes are ignored
69398c84b2SBarry Smith 
70398c84b2SBarry Smith     Level: developer
71398c84b2SBarry Smith 
72130e142eSJunchao Zhang .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_FORWARD, SCATTER_FORWARD_LOCAL,
73398c84b2SBarry Smith           SCATTER_REVERSE
74398c84b2SBarry Smith 
75398c84b2SBarry Smith M*/
76398c84b2SBarry Smith 
7776bdecfbSBarry Smith /*J
788f6c3df8SBarry Smith     VecType - String with the name of a PETSc vector
7909321671SBarry Smith 
8009321671SBarry Smith    Level: beginner
8109321671SBarry Smith 
828f6c3df8SBarry Smith .seealso: VecSetType(), Vec, VecCreate(), VecDestroy()
8376bdecfbSBarry Smith J*/
8419fd82e9SBarry Smith typedef const char* VecType;
850676abe4SMatthew Knepley #define VECSEQ         "seq"
860676abe4SMatthew Knepley #define VECMPI         "mpi"
87f48c50deSBarry Smith #define VECSTANDARD    "standard"   /* seq on one process and mpi on several */
880676abe4SMatthew Knepley #define VECSHARED      "shared"
89b17c682bSKarl Rupp #define VECSEQVIENNACL "seqviennacl"
90b17c682bSKarl Rupp #define VECMPIVIENNACL "mpiviennacl"
91b17c682bSKarl Rupp #define VECVIENNACL    "viennacl"   /* seqviennacl on one process and mpiviennacl on several */
9282f73ecaSAlejandro Lamas Daviña #define VECSEQCUDA     "seqcuda"
9382f73ecaSAlejandro Lamas Daviña #define VECMPICUDA     "mpicuda"
9482f73ecaSAlejandro Lamas Daviña #define VECCUDA        "cuda"       /* seqcuda on one process and mpicuda on several */
9559af0bd3SScott Kruger #define VECSEQHIP      "seqhip"
9659af0bd3SScott Kruger #define VECMPIHIP      "mpihip"
9759af0bd3SScott Kruger #define VECHIP         "hip"       /* seqcuda on one process and mpicuda on several */
981aae2881SJed Brown #define VECNEST        "nest"
9910171e34SJunchao Zhang #define VECSEQKOKKOS   "seqkokkos"
10010171e34SJunchao Zhang #define VECMPIKOKKOS   "mpikokkos"
10110171e34SJunchao Zhang #define VECKOKKOS      "kokkos"     /* seqkokkos on one process and mpikokkos on several */
1022eac72dbSBarry Smith 
103803a1b88SHong Zhang /* Dynamic creation and loading functions */
104803a1b88SHong Zhang PETSC_EXTERN PetscErrorCode VecScatterSetType(VecScatter, VecScatterType);
105803a1b88SHong Zhang PETSC_EXTERN PetscErrorCode VecScatterGetType(VecScatter, VecScatterType*);
106803a1b88SHong Zhang PETSC_EXTERN PetscErrorCode VecScatterSetFromOptions(VecScatter);
107803a1b88SHong Zhang PETSC_EXTERN PetscErrorCode VecScatterRegister(const char[],PetscErrorCode (*)(VecScatter));
108130e142eSJunchao Zhang PETSC_EXTERN PetscErrorCode VecScatterCreate(Vec,IS,Vec,IS,VecScatter*);
1094b71561bSShri Abhyankar 
110fd487807SMatthew Knepley /* Logging support */
111450a797fSBarry Smith #define    REAL_FILE_CLASSID 1211213
1120700a824SBarry Smith #define    VEC_FILE_CLASSID 1211214
113014dd563SJed Brown PETSC_EXTERN PetscClassId VEC_CLASSID;
11497929ea7SJunchao Zhang PETSC_EXTERN PetscClassId PETSCSF_CLASSID;
11545b63f25SDmitry Karpeev 
116607a6623SBarry Smith PETSC_EXTERN PetscErrorCode VecInitializePackage(void);
117014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecFinalizePackage(void);
118fd487807SMatthew Knepley 
119014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreate(MPI_Comm,Vec*);
120014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateSeq(MPI_Comm,PetscInt,Vec*);
121014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateMPI(MPI_Comm,PetscInt,PetscInt,Vec*);
122014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateSeqWithArray(MPI_Comm,PetscInt,PetscInt,const PetscScalar[],Vec*);
123014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateMPIWithArray(MPI_Comm,PetscInt,PetscInt,PetscInt,const PetscScalar[],Vec*);
124014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateShared(MPI_Comm,PetscInt,PetscInt,Vec*);
125803a1b88SHong Zhang PETSC_EXTERN PetscErrorCode VecCreateNode(MPI_Comm,PetscInt,PetscInt,Vec*);
126803a1b88SHong Zhang 
127014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetFromOptions(Vec);
128fe2efc57SMark PETSC_EXTERN PetscErrorCode VecViewFromOptions(Vec,PetscObject,const char[]);
1290d2bece7SBarry Smith 
130014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetUp(Vec);
131014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecDestroy(Vec*);
132014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecZeroEntries(Vec);
133014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetOptionsPrefix(Vec,const char[]);
134014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAppendOptionsPrefix(Vec,const char[]);
135014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetOptionsPrefix(Vec,const char*[]);
136f69a0ea3SMatthew Knepley 
137014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetSizes(Vec,PetscInt,PetscInt);
138fd487807SMatthew Knepley 
13952b6e47cSBarry Smith PETSC_EXTERN PetscErrorCode VecDotNorm2(Vec,Vec,PetscScalar*,PetscReal*);
140014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecDot(Vec,Vec,PetscScalar*);
14167392de3SBarry Smith PETSC_EXTERN PetscErrorCode VecDotRealPart(Vec,Vec,PetscReal*);
142014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecTDot(Vec,Vec,PetscScalar*);
143014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMDot(Vec,PetscInt,const Vec[],PetscScalar[]);
144014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMTDot(Vec,PetscInt,const Vec[],PetscScalar[]);
145014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetSubVector(Vec,IS,Vec*);
146014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecRestoreSubVector(Vec,IS,Vec*);
147598f99faSAlp Dener PETSC_EXTERN PetscErrorCode VecConcatenate(PetscInt,const Vec[],Vec*,IS*[]);
148cddf8d76SBarry Smith 
14909321671SBarry Smith /*E
15009321671SBarry Smith     NormType - determines what type of norm to compute
15109321671SBarry Smith 
15209321671SBarry Smith     Level: beginner
15309321671SBarry Smith 
15409321671SBarry Smith .seealso: VecNorm(), VecNormBegin(), VecNormEnd(), MatNorm()
15509321671SBarry Smith E*/
156a873a8cdSSam Reynolds typedef enum {NORM_1=0,
157a873a8cdSSam Reynolds               NORM_2=1,
158a873a8cdSSam Reynolds               NORM_FROBENIUS=2,
159a873a8cdSSam Reynolds               NORM_INFINITY=3,
160a873a8cdSSam Reynolds               NORM_1_AND_2=4
161a873a8cdSSam Reynolds               } NormType;
1626a6fc655SJed Brown PETSC_EXTERN const char *const NormTypes[];
163cddf8d76SBarry Smith #define NORM_MAX NORM_INFINITY
16409321671SBarry Smith 
1659b250c83SBarry Smith /*MC
1669b250c83SBarry Smith      NORM_1 - the one norm, ||v|| = sum_i | v_i |. ||A|| = max_j || v_*j ||, maximum column sum
1679b250c83SBarry Smith 
1689b250c83SBarry Smith    Level: beginner
1699b250c83SBarry Smith 
1709b250c83SBarry Smith .seealso:  NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_2, NORM_FROBENIUS,
1719b250c83SBarry Smith            NORM_INFINITY, NORM_1_AND_2
1729b250c83SBarry Smith 
1739b250c83SBarry Smith M*/
1749b250c83SBarry Smith 
1759b250c83SBarry Smith /*MC
176df54d55cSMatthias Liertzer      NORM_2 - the two norm, ||v|| = sqrt(sum_i |v_i|^2) (vectors only)
1779b250c83SBarry Smith 
1789b250c83SBarry Smith    Level: beginner
1799b250c83SBarry Smith 
1809b250c83SBarry Smith .seealso:  NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_FROBENIUS,
1819b250c83SBarry Smith            NORM_INFINITY, NORM_1_AND_2
1829b250c83SBarry Smith 
1839b250c83SBarry Smith M*/
1849b250c83SBarry Smith 
1859b250c83SBarry Smith /*MC
186df54d55cSMatthias Liertzer      NORM_FROBENIUS - ||A|| = sqrt(sum_ij |A_ij|^2), same as NORM_2 for vectors
1879b250c83SBarry Smith 
1889b250c83SBarry Smith    Level: beginner
1899b250c83SBarry Smith 
1909b250c83SBarry Smith .seealso:  NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_2,
1919b250c83SBarry Smith            NORM_INFINITY, NORM_1_AND_2
1929b250c83SBarry Smith 
1939b250c83SBarry Smith M*/
1949b250c83SBarry Smith 
1959b250c83SBarry Smith /*MC
1969b250c83SBarry Smith      NORM_INFINITY - ||v|| = max_i |v_i|. ||A|| = max_i || v_i* ||, maximum row sum
1979b250c83SBarry Smith 
1989b250c83SBarry Smith    Level: beginner
1999b250c83SBarry Smith 
2009b250c83SBarry Smith .seealso:  NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_2,
20152e318dbSPierre Jolivet            NORM_FROBENIUS, NORM_1_AND_2
2029b250c83SBarry Smith 
2039b250c83SBarry Smith M*/
2049b250c83SBarry Smith 
2059b250c83SBarry Smith /*MC
2069b250c83SBarry Smith      NORM_1_AND_2 - computes both the 1 and 2 norm of a vector
2079b250c83SBarry Smith 
2089b250c83SBarry Smith    Level: beginner
2099b250c83SBarry Smith 
2109b250c83SBarry Smith .seealso:  NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_2,
21152e318dbSPierre Jolivet            NORM_FROBENIUS, NORM_INFINITY
2129b250c83SBarry Smith 
2139b250c83SBarry Smith M*/
2149b250c83SBarry Smith 
2159b250c83SBarry Smith /*MC
2169b250c83SBarry Smith      NORM_MAX - see NORM_INFINITY
2179b250c83SBarry Smith 
218d41222bbSBarry Smith    Level: beginner
219d41222bbSBarry Smith 
2209b250c83SBarry Smith M*/
2219b250c83SBarry Smith 
222a873a8cdSSam Reynolds /*E
223857cbf51SRichard Tran Mills     ReductionType - determines what type of column reduction (one that is not a type of norm defined in NormType) to compute
224a873a8cdSSam Reynolds 
225a873a8cdSSam Reynolds     Level: beginner
226a873a8cdSSam Reynolds 
227a873a8cdSSam Reynolds .seealso: MatGetColumnReductions(), MatGetColumnNorms(), NormType
228a873a8cdSSam Reynolds E*/
229857cbf51SRichard Tran Mills /* NOTE: The integer constants defined in ReductionType MUST BE DISTINCT from those defined in NormType.
230857cbf51SRichard Tran Mills  * This is because MatGetColumnReductions() is used to compute both norms and other types of reductions,
231857cbf51SRichard Tran Mills  * and the constants defined in both NormType and ReductionType are used to designate the desired operation. */
232857cbf51SRichard Tran Mills typedef enum {REDUCTION_SUM_REALPART=10,
233857cbf51SRichard Tran Mills               REDUCTION_MEAN_REALPART=11,
234857cbf51SRichard Tran Mills               REDUCTION_SUM_IMAGINARYPART=12,
235857cbf51SRichard Tran Mills               REDUCTION_MEAN_IMAGINARYPART=13
236a873a8cdSSam Reynolds               } ReductionType;
237a873a8cdSSam Reynolds 
238a873a8cdSSam Reynolds /*MC
239857cbf51SRichard Tran Mills      REDUCTION_SUM_REALPART - sum of real part of matrix column
240a873a8cdSSam Reynolds 
241a873a8cdSSam Reynolds    Level: beginner
242a873a8cdSSam Reynolds 
243857cbf51SRichard Tran Mills .seealso:  ReductionType, MatGetColumnReductions(), REDUCTION_SUM_IMAGINARYPART, REDUCTION_MEAN_REALPART, REDUCTION_NORM_1,
244a873a8cdSSam Reynolds            REDUCTION_NORM_2, REDUCTION_NORM_FROBENIUS, REDUCTION_NORM_INFINITY
245a873a8cdSSam Reynolds 
246a873a8cdSSam Reynolds M*/
247a873a8cdSSam Reynolds 
248a873a8cdSSam Reynolds /*MC
249857cbf51SRichard Tran Mills      REDUCTION_SUM_IMAGINARYPART - sum of imaginary part of matrix column
250a873a8cdSSam Reynolds 
251a873a8cdSSam Reynolds    Level: beginner
252a873a8cdSSam Reynolds 
253857cbf51SRichard Tran Mills .seealso:  ReductionType, MatGetColumnReductions(), REDUCTION_SUM_REALPART, REDUCTION_MEAN_IMAGINARYPART, REDUCTION_NORM_1,
254857cbf51SRichard Tran Mills            REDUCTION_NORM_2, REDUCTION_NORM_FROBENIUS, REDUCTION_NORM_INFINITY
255857cbf51SRichard Tran Mills 
256857cbf51SRichard Tran Mills M*/
257857cbf51SRichard Tran Mills 
258857cbf51SRichard Tran Mills /*MC
259857cbf51SRichard Tran Mills      REDUCTION_MEAN_REALPART - arithmetic mean of real part of matrix column
260857cbf51SRichard Tran Mills 
261857cbf51SRichard Tran Mills    Level: beginner
262857cbf51SRichard Tran Mills 
263857cbf51SRichard Tran Mills .seealso:  ReductionType, MatGetColumnReductions(), REDUCTION_MEAN_IMAGINARYPART, REDUCTION_SUM_REALPART, REDUCTION_NORM_1,
264857cbf51SRichard Tran Mills            REDUCTION_NORM_2, REDUCTION_NORM_FROBENIUS, REDUCTION_NORM_INFINITY
265857cbf51SRichard Tran Mills 
266857cbf51SRichard Tran Mills M*/
267857cbf51SRichard Tran Mills 
268857cbf51SRichard Tran Mills /*MC
269857cbf51SRichard Tran Mills      REDUCTION_MEAN_IMAGINARYPART - arithmetic mean of imaginary part of matrix column
270857cbf51SRichard Tran Mills 
271857cbf51SRichard Tran Mills    Level: beginner
272857cbf51SRichard Tran Mills 
273857cbf51SRichard Tran Mills .seealso:  ReductionType, MatGetColumnReductions(), REDUCTION_MEAN_REALPART, REDUCTION_SUM_IMAGINARYPART, REDUCTION_NORM_1,
274a873a8cdSSam Reynolds            REDUCTION_NORM_2, REDUCTION_NORM_FROBENIUS, REDUCTION_NORM_INFINITY
275a873a8cdSSam Reynolds 
276a873a8cdSSam Reynolds M*/
277a873a8cdSSam Reynolds 
278014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNorm(Vec,NormType,PetscReal *);
279014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNormAvailable(Vec,NormType,PetscBool *,PetscReal *);
280014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNormalize(Vec,PetscReal *);
281014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSum(Vec,PetscScalar*);
282f7c17b9fSRichard Tran Mills PETSC_EXTERN PetscErrorCode VecMean(Vec,PetscScalar*);
283014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMax(Vec,PetscInt*,PetscReal *);
284014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMin(Vec,PetscInt*,PetscReal *);
285014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScale(Vec,PetscScalar);
286014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCopy(Vec,Vec);
287014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetRandom(Vec,PetscRandom);
288014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSet(Vec,PetscScalar);
289422a814eSBarry Smith PETSC_EXTERN PetscErrorCode VecSetInf(Vec);
290014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSwap(Vec,Vec);
291014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAXPY(Vec,PetscScalar,Vec);
292014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAXPBY(Vec,PetscScalar,PetscScalar,Vec);
293014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMAXPY(Vec,PetscInt,const PetscScalar[],Vec[]);
294014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAYPX(Vec,PetscScalar,Vec);
295014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecWAXPY(Vec,PetscScalar,Vec,Vec);
296014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAXPBYPCZ(Vec,PetscScalar,PetscScalar,PetscScalar,Vec,Vec);
297014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecPointwiseMax(Vec,Vec,Vec);
298014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecPointwiseMaxAbs(Vec,Vec,Vec);
299014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecPointwiseMin(Vec,Vec,Vec);
300014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecPointwiseMult(Vec,Vec,Vec);
301014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecPointwiseDivide(Vec,Vec,Vec);
302014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMaxPointwiseDivide(Vec,Vec,PetscReal*);
303014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecShift(Vec,PetscScalar);
304014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecReciprocal(Vec);
305014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecPermute(Vec, IS, PetscBool);
306014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSqrtAbs(Vec);
307014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecLog(Vec);
308014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecExp(Vec);
309014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAbs(Vec);
310014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecDuplicate(Vec,Vec*);
311014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecDuplicateVecs(Vec,PetscInt,Vec*[]);
312014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecDestroyVecs(PetscInt, Vec*[]);
313014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideNormAll(Vec,NormType,PetscReal[]);
314014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideMaxAll(Vec,PetscInt [],PetscReal []);
315014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideMinAll(Vec,PetscInt [],PetscReal []);
316014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideScaleAll(Vec,const PetscScalar[]);
317849b11cfSMatthew G. Knepley PETSC_EXTERN PetscErrorCode VecUniqueEntries(Vec,PetscInt*,PetscScalar**);
3184a560884SBarry Smith 
319014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideNorm(Vec,PetscInt,NormType,PetscReal*);
320014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideMax(Vec,PetscInt,PetscInt *,PetscReal *);
321014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideMin(Vec,PetscInt,PetscInt *,PetscReal *);
322014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideScale(Vec,PetscInt,PetscScalar);
323014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideSet(Vec,PetscInt,PetscScalar);
324954b3ec6SBarry Smith 
325014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideGather(Vec,PetscInt,Vec,InsertMode);
326014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideScatter(Vec,PetscInt,Vec,InsertMode);
327014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideGatherAll(Vec,Vec[],InsertMode);
328014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStrideScatterAll(Vec[],Vec,InsertMode);
329d2655a18SBarry Smith 
330bdeb6c88SBarry Smith PETSC_EXTERN PetscErrorCode VecStrideSubSetScatter(Vec,PetscInt,const PetscInt[],const PetscInt[],Vec,InsertMode);
331bdeb6c88SBarry Smith PETSC_EXTERN PetscErrorCode VecStrideSubSetGather(Vec,PetscInt,const PetscInt[],const PetscInt[],Vec,InsertMode);
332bdeb6c88SBarry Smith 
333014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetValues(Vec,PetscInt,const PetscInt[],const PetscScalar[],InsertMode);
334014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetValues(Vec,PetscInt,const PetscInt[],PetscScalar[]);
335014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAssemblyBegin(Vec);
336014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecAssemblyEnd(Vec);
337014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStashSetInitialSize(Vec,PetscInt,PetscInt);
338014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStashView(Vec,PetscViewer);
339685405a1SBarry Smith PETSC_EXTERN PetscErrorCode VecStashViewFromOptions(Vec,PetscObject,const char[]);
340014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecStashGetInfo(Vec,PetscInt*,PetscInt*,PetscInt*,PetscInt*);
34162dc5420SSatish Balay 
34230de9b25SBarry Smith /*MC
34330de9b25SBarry Smith    VecSetValue - Set a single entry into a vector.
34430de9b25SBarry Smith 
34530de9b25SBarry Smith    Synopsis:
346aaa7dc30SBarry Smith    #include <petscvec.h>
3478122439eSJed Brown    PetscErrorCode VecSetValue(Vec v,PetscInt row,PetscScalar value, InsertMode mode);
34830de9b25SBarry Smith 
34930de9b25SBarry Smith    Not Collective
35030de9b25SBarry Smith 
35130de9b25SBarry Smith    Input Parameters:
35230de9b25SBarry Smith +  v - the vector
35330de9b25SBarry Smith .  row - the row location of the entry
35430de9b25SBarry Smith .  value - the value to insert
35530de9b25SBarry Smith -  mode - either INSERT_VALUES or ADD_VALUES
35630de9b25SBarry Smith 
35730de9b25SBarry Smith    Notes:
35830de9b25SBarry Smith    For efficiency one should use VecSetValues() and set several or
35930de9b25SBarry Smith    many values simultaneously if possible.
36030de9b25SBarry Smith 
3611d73ed98SBarry Smith    These values may be cached, so VecAssemblyBegin() and VecAssemblyEnd()
362879a43d7SBarry Smith    MUST be called after all calls to VecSetValue() have been completed.
3631d73ed98SBarry Smith 
364879a43d7SBarry Smith    VecSetValue() uses 0-based indices in Fortran as well as in C.
3651d73ed98SBarry Smith 
3661d73ed98SBarry Smith    Level: beginner
3671d73ed98SBarry Smith 
3681d73ed98SBarry Smith .seealso: VecSetValues(), VecAssemblyBegin(), VecAssemblyEnd(), VecSetValuesBlockedLocal(), VecSetValueLocal()
3691d73ed98SBarry Smith M*/
37050755921SBarry Smith PETSC_STATIC_INLINE PetscErrorCode VecSetValue(Vec v,PetscInt i,PetscScalar va,InsertMode mode) {return VecSetValues(v,1,&i,&va,mode);}
3711d73ed98SBarry Smith 
372014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetBlockSize(Vec,PetscInt);
373014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetBlockSize(Vec,PetscInt*);
374014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetValuesBlocked(Vec,PetscInt,const PetscInt[],const PetscScalar[],InsertMode);
3758ed539a5SBarry Smith 
376fd487807SMatthew Knepley /* Dynamic creation and loading functions */
377140e18c1SBarry Smith PETSC_EXTERN PetscFunctionList VecList;
37819fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode VecSetType(Vec,VecType);
37919fd82e9SBarry Smith PETSC_EXTERN PetscErrorCode VecGetType(Vec,VecType*);
380bdf89e91SBarry Smith PETSC_EXTERN PetscErrorCode VecRegister(const char[],PetscErrorCode (*)(Vec));
38130de9b25SBarry Smith 
382014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterBegin(VecScatter,Vec,Vec,InsertMode,ScatterMode);
383014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterEnd(VecScatter,Vec,Vec,InsertMode,ScatterMode);
384014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterDestroy(VecScatter*);
385246626dcSBarry Smith PETSC_EXTERN PetscErrorCode VecScatterSetUp(VecScatter);
386014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterCopy(VecScatter,VecScatter *);
387014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterView(VecScatter,PetscViewer);
388fe2efc57SMark PETSC_EXTERN PetscErrorCode VecScatterViewFromOptions(VecScatter,PetscObject,const char[]);
389d27e6124SSatish Balay PETSC_EXTERN PetscErrorCode VecScatterRemap(VecScatter,PetscInt[],PetscInt[]);
390014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterGetMerged(VecScatter,PetscBool*);
3912195c698SBarry Smith 
392014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetArray4d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar****[]);
393014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecRestoreArray4d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar****[]);
394014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetArray3d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar***[]);
395014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecRestoreArray3d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar***[]);
396014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetArray2d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar**[]);
397014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecRestoreArray2d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar**[]);
398014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetArray1d(Vec,PetscInt,PetscInt,PetscScalar*[]);
399014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecRestoreArray1d(Vec,PetscInt,PetscInt,PetscScalar*[]);
400ab360428SBarry Smith 
401fdc842d1SBarry Smith PETSC_EXTERN PetscErrorCode VecGetArray4dWrite(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar****[]);
402fdc842d1SBarry Smith PETSC_EXTERN PetscErrorCode VecGetArray4dWrite(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar****[]);
403fdc842d1SBarry Smith PETSC_EXTERN PetscErrorCode VecRestoreArray4dWrite(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar****[]);
404fdc842d1SBarry Smith PETSC_EXTERN PetscErrorCode VecGetArray3dWrite(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar***[]);
405fdc842d1SBarry Smith PETSC_EXTERN PetscErrorCode VecRestoreArray3dWrite(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar***[]);
406fdc842d1SBarry Smith PETSC_EXTERN PetscErrorCode VecGetArray2dWrite(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar**[]);
407fdc842d1SBarry Smith PETSC_EXTERN PetscErrorCode VecRestoreArray2dWrite(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar**[]);
408fdc842d1SBarry Smith PETSC_EXTERN PetscErrorCode VecGetArray1dWrite(Vec,PetscInt,PetscInt,PetscScalar*[]);
409fdc842d1SBarry Smith PETSC_EXTERN PetscErrorCode VecRestoreArray1dWrite(Vec,PetscInt,PetscInt,PetscScalar*[]);
410fdc842d1SBarry Smith 
4115edff71fSBarry Smith PETSC_EXTERN PetscErrorCode VecGetArray4dRead(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar****[]);
4125edff71fSBarry Smith PETSC_EXTERN PetscErrorCode VecRestoreArray4dRead(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar****[]);
4135edff71fSBarry Smith PETSC_EXTERN PetscErrorCode VecGetArray3dRead(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar***[]);
4145edff71fSBarry Smith PETSC_EXTERN PetscErrorCode VecRestoreArray3dRead(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar***[]);
4155edff71fSBarry Smith PETSC_EXTERN PetscErrorCode VecGetArray2dRead(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar**[]);
4165edff71fSBarry Smith PETSC_EXTERN PetscErrorCode VecRestoreArray2dRead(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar**[]);
4175edff71fSBarry Smith PETSC_EXTERN PetscErrorCode VecGetArray1dRead(Vec,PetscInt,PetscInt,PetscScalar*[]);
4185edff71fSBarry Smith PETSC_EXTERN PetscErrorCode VecRestoreArray1dRead(Vec,PetscInt,PetscInt,PetscScalar*[]);
4195edff71fSBarry Smith 
420014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecPlaceArray(Vec,const PetscScalar[]);
421014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecResetArray(Vec);
422014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecReplaceArray(Vec,const PetscScalar[]);
423de0d48c1SKarl Rupp 
424014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetArrays(const Vec[],PetscInt,PetscScalar**[]);
425014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecRestoreArrays(const Vec[],PetscInt,PetscScalar**[]);
42684cb2905SBarry Smith 
427014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecView(Vec,PetscViewer);
428*f9558f5cSBarry Smith PETSC_EXTERN PetscErrorCode VecViewNative(Vec,PetscViewer);
429014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecEqual(Vec,Vec,PetscBool*);
430014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecLoad(Vec,PetscViewer);
4318ed539a5SBarry Smith 
432014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetSize(Vec,PetscInt*);
433014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetLocalSize(Vec,PetscInt*);
434014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetOwnershipRange(Vec,PetscInt*,PetscInt*);
435014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetOwnershipRanges(Vec,const PetscInt*[]);
4368ed539a5SBarry Smith 
437014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetLocalToGlobalMapping(Vec,ISLocalToGlobalMapping);
438014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetValuesLocal(Vec,PetscInt,const PetscInt[],const PetscScalar[],InsertMode);
43988b03592SBarry Smith 
4409a971ab9SStefano Zampini PETSC_EXTERN PetscErrorCode VecCUDAGetArray(Vec,PetscScalar**);
4419a971ab9SStefano Zampini PETSC_EXTERN PetscErrorCode VecCUDARestoreArray(Vec,PetscScalar**);
442de0d48c1SKarl Rupp 
4439a971ab9SStefano Zampini PETSC_EXTERN PetscErrorCode VecCUDAGetArrayRead(Vec,const PetscScalar**);
4449a971ab9SStefano Zampini PETSC_EXTERN PetscErrorCode VecCUDARestoreArrayRead(Vec,const PetscScalar**);
445de0d48c1SKarl Rupp 
4469a971ab9SStefano Zampini PETSC_EXTERN PetscErrorCode VecCUDAGetArrayWrite(Vec,PetscScalar**);
4479a971ab9SStefano Zampini PETSC_EXTERN PetscErrorCode VecCUDARestoreArrayWrite(Vec,PetscScalar**);
448de0d48c1SKarl Rupp 
449cbf3516aSStefano Zampini PETSC_EXTERN PetscErrorCode VecCUDAPlaceArray(Vec,const PetscScalar[]);
450cbf3516aSStefano Zampini PETSC_EXTERN PetscErrorCode VecCUDAReplaceArray(Vec,const PetscScalar[]);
451de0d48c1SKarl Rupp PETSC_EXTERN PetscErrorCode VecCUDAResetArray(Vec);
452de0d48c1SKarl Rupp 
45359af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecHIPGetArray(Vec,PetscScalar**);
45459af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecHIPRestoreArray(Vec,PetscScalar**);
45559af0bd3SScott Kruger 
45659af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecHIPGetArrayRead(Vec,const PetscScalar**);
45759af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecHIPRestoreArrayRead(Vec,const PetscScalar**);
45859af0bd3SScott Kruger 
45959af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecHIPGetArrayWrite(Vec,PetscScalar**);
46059af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecHIPRestoreArrayWrite(Vec,PetscScalar**);
46159af0bd3SScott Kruger 
46259af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecHIPPlaceArray(Vec,const PetscScalar[]);
46359af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecHIPReplaceArray(Vec,const PetscScalar[]);
46459af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecHIPResetArray(Vec);
46559af0bd3SScott Kruger 
46676ec7f3eSKaushik Kulkarni PETSC_EXTERN PetscErrorCode VecViennaCLGetCLContext(Vec, PETSC_UINTPTR_T*);
46776ec7f3eSKaushik Kulkarni PETSC_EXTERN PetscErrorCode VecViennaCLGetCLQueue(Vec, PETSC_UINTPTR_T*);
46876ec7f3eSKaushik Kulkarni PETSC_EXTERN PetscErrorCode VecViennaCLGetCLMemRead(Vec, PETSC_UINTPTR_T*);
46976ec7f3eSKaushik Kulkarni PETSC_EXTERN PetscErrorCode VecViennaCLGetCLMemWrite(Vec, PETSC_UINTPTR_T*);
47076ec7f3eSKaushik Kulkarni PETSC_EXTERN PetscErrorCode VecViennaCLRestoreCLMemWrite(Vec);
47176ec7f3eSKaushik Kulkarni PETSC_EXTERN PetscErrorCode VecViennaCLGetCLMem(Vec, PETSC_UINTPTR_T*);
47276ec7f3eSKaushik Kulkarni PETSC_EXTERN PetscErrorCode VecViennaCLRestoreCLMem(Vec);
47376ec7f3eSKaushik Kulkarni 
47488b03592SBarry Smith /*MC
47588b03592SBarry Smith    VecSetValueLocal - Set a single entry into a vector using the local numbering
47688b03592SBarry Smith 
47788b03592SBarry Smith    Synopsis:
478aaa7dc30SBarry Smith    #include <petscvec.h>
4798122439eSJed Brown    PetscErrorCode VecSetValueLocal(Vec v,PetscInt row,PetscScalar value, InsertMode mode);
48088b03592SBarry Smith 
48188b03592SBarry Smith    Not Collective
48288b03592SBarry Smith 
48388b03592SBarry Smith    Input Parameters:
48488b03592SBarry Smith +  v - the vector
48588b03592SBarry Smith .  row - the row location of the entry
48688b03592SBarry Smith .  value - the value to insert
48788b03592SBarry Smith -  mode - either INSERT_VALUES or ADD_VALUES
48888b03592SBarry Smith 
48988b03592SBarry Smith    Notes:
49088b03592SBarry Smith    For efficiency one should use VecSetValues() and set several or
49188b03592SBarry Smith    many values simultaneously if possible.
49288b03592SBarry Smith 
49388b03592SBarry Smith    These values may be cached, so VecAssemblyBegin() and VecAssemblyEnd()
49488b03592SBarry Smith    MUST be called after all calls to VecSetValues() have been completed.
49588b03592SBarry Smith 
49688b03592SBarry Smith    VecSetValues() uses 0-based indices in Fortran as well as in C.
49788b03592SBarry Smith 
49888b03592SBarry Smith    Level: beginner
49988b03592SBarry Smith 
50088b03592SBarry Smith .seealso: VecSetValues(), VecAssemblyBegin(), VecAssemblyEnd(), VecSetValuesBlockedLocal(), VecSetValue()
50188b03592SBarry Smith M*/
50288b03592SBarry Smith PETSC_STATIC_INLINE PetscErrorCode VecSetValueLocal(Vec v,PetscInt i,PetscScalar va,InsertMode mode) {return VecSetValuesLocal(v,1,&i,&va,mode);}
50388b03592SBarry Smith 
504014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetValuesBlockedLocal(Vec,PetscInt,const PetscInt[],const PetscScalar[],InsertMode);
505014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGetLocalToGlobalMapping(Vec,ISLocalToGlobalMapping*);
50690f02eecSBarry Smith 
507014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecDotBegin(Vec,Vec,PetscScalar *);
508014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecDotEnd(Vec,Vec,PetscScalar *);
509014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecTDotBegin(Vec,Vec,PetscScalar *);
510014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecTDotEnd(Vec,Vec,PetscScalar *);
511014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNormBegin(Vec,NormType,PetscReal *);
512014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNormEnd(Vec,NormType,PetscReal *);
513d3c178dbSBarry Smith 
514014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMDotBegin(Vec,PetscInt,const Vec[],PetscScalar[]);
515014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMDotEnd(Vec,PetscInt,const Vec[],PetscScalar[]);
516014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMTDotBegin(Vec,PetscInt,const Vec[],PetscScalar[]);
517014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMTDotEnd(Vec,PetscInt,const Vec[],PetscScalar[]);
518014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscCommSplitReductionBegin(MPI_Comm);
519a751f32aSSatish Balay 
520b470e4b4SRichard Tran Mills PETSC_EXTERN PetscErrorCode VecBindToCPU(Vec,PetscBool);
521b470e4b4SRichard Tran Mills PETSC_DEPRECATED_FUNCTION("Use VecBindToCPU (since v3.13)") PETSC_STATIC_INLINE PetscErrorCode VecPinToCPU(Vec v,PetscBool flg) {return VecBindToCPU(v,flg);}
5222216c58aSStefano Zampini PETSC_EXTERN PetscErrorCode VecBoundToCPU(Vec,PetscBool*);
52365a9ecf2SRichard Tran Mills PETSC_EXTERN PetscErrorCode VecSetBindingPropagates(Vec,PetscBool);
524e9c74fd6SRichard Tran Mills PETSC_EXTERN PetscErrorCode VecGetBindingPropagates(Vec,PetscBool *);
525387df023SRichard Tran Mills PETSC_EXTERN PetscErrorCode VecSetPinnedMemoryMin(Vec,size_t);
526387df023SRichard Tran Mills PETSC_EXTERN PetscErrorCode VecGetPinnedMemoryMin(Vec,size_t *);
527a751f32aSSatish Balay 
5286fe358cdSKaushik Kulkarni PETSC_EXTERN PetscErrorCode VecGetOffloadMask(Vec,PetscOffloadMask *);
52948d97fd2SKaushik Kulkarni 
530bda0d2a0SJed Brown typedef enum {VEC_IGNORE_OFF_PROC_ENTRIES,VEC_IGNORE_NEGATIVE_INDICES,VEC_SUBSET_OFF_PROC_ENTRIES} VecOption;
531014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetOption(Vec,VecOption,PetscBool);
53290f02eecSBarry Smith 
5335c0c2446SJed Brown PETSC_EXTERN PetscErrorCode VecGetArray(Vec,PetscScalar**);
534fdc842d1SBarry Smith PETSC_EXTERN PetscErrorCode VecGetArrayWrite(Vec,PetscScalar**);
5355c0c2446SJed Brown PETSC_EXTERN PetscErrorCode VecGetArrayRead(Vec,const PetscScalar**);
5365c0c2446SJed Brown PETSC_EXTERN PetscErrorCode VecRestoreArray(Vec,PetscScalar**);
537fdc842d1SBarry Smith PETSC_EXTERN PetscErrorCode VecRestoreArrayWrite(Vec,PetscScalar**);
5385c0c2446SJed Brown PETSC_EXTERN PetscErrorCode VecRestoreArrayRead(Vec,const PetscScalar**);
539046dc149SDominic Meiser PETSC_EXTERN PetscErrorCode VecGetLocalVector(Vec,Vec);
540046dc149SDominic Meiser PETSC_EXTERN PetscErrorCode VecRestoreLocalVector(Vec,Vec);
541046dc149SDominic Meiser PETSC_EXTERN PetscErrorCode VecGetLocalVectorRead(Vec,Vec);
542046dc149SDominic Meiser PETSC_EXTERN PetscErrorCode VecRestoreLocalVectorRead(Vec,Vec);
543a256111fSJunchao Zhang PETSC_EXTERN PetscErrorCode VecGetArrayAndMemType(Vec,PetscScalar**,PetscMemType*);
544a256111fSJunchao Zhang PETSC_EXTERN PetscErrorCode VecRestoreArrayAndMemType(Vec,PetscScalar**);
545a256111fSJunchao Zhang PETSC_EXTERN PetscErrorCode VecGetArrayReadAndMemType(Vec,const PetscScalar**,PetscMemType*);
546a256111fSJunchao Zhang PETSC_EXTERN PetscErrorCode VecRestoreArrayReadAndMemType(Vec,const PetscScalar**);
54710171e34SJunchao Zhang 
5489521ec69SBarry Smith /*@C
5499521ec69SBarry Smith    VecGetArrayPair - Accesses a pair of pointers for two vectors that may be common. When not common the first is read only
5509521ec69SBarry Smith 
551d083f849SBarry Smith    Logically Collective on x
5529521ec69SBarry Smith 
553f5f57ec0SBarry Smith    Input Parameters:
5549521ec69SBarry Smith +  x - the vector
5559521ec69SBarry Smith -  y - the second vector
5569521ec69SBarry Smith 
557f5f57ec0SBarry Smith    Output Parameters:
5589521ec69SBarry Smith +  xv - location to put pointer to the first array
5599521ec69SBarry Smith -  yv - location to put pointer to the second array
5609521ec69SBarry Smith 
5619521ec69SBarry Smith    Level: developer
5629521ec69SBarry Smith 
563f5f57ec0SBarry Smith    Not available from Fortran
564f5f57ec0SBarry Smith 
5659521ec69SBarry Smith .seealso: VecGetArray(), VecGetArrayRead(), VecRestoreArrayPair()
5669521ec69SBarry Smith 
5679521ec69SBarry Smith @*/
568d9ca1df4SBarry Smith PETSC_STATIC_INLINE PetscErrorCode VecGetArrayPair(Vec x,Vec y,PetscScalar **xv,PetscScalar **yv)
569d9ca1df4SBarry Smith {
570d9ca1df4SBarry Smith   PetscErrorCode ierr;
571d9ca1df4SBarry Smith 
572d9ca1df4SBarry Smith   PetscFunctionBegin;
573d9ca1df4SBarry Smith   ierr = VecGetArray(y,yv);CHKERRQ(ierr);
574d9ca1df4SBarry Smith   if (x != y) {
575d9ca1df4SBarry Smith     ierr = VecGetArrayRead(x,(const PetscScalar **)xv);CHKERRQ(ierr);
576d9ca1df4SBarry Smith   } else {
577d9ca1df4SBarry Smith     *xv = *yv;
578d9ca1df4SBarry Smith   }
579d9ca1df4SBarry Smith   PetscFunctionReturn(0);
580d9ca1df4SBarry Smith }
5819521ec69SBarry Smith 
5829521ec69SBarry Smith /*@C
5839521ec69SBarry Smith    VecRestoreArrayPair - Returns a pair of pointers for two vectors that may be common. When not common the first is read only
5849521ec69SBarry Smith 
585d083f849SBarry Smith    Logically Collective on x
5869521ec69SBarry Smith 
587f5f57ec0SBarry Smith    Input Parameters:
5889521ec69SBarry Smith +  x - the vector
5899521ec69SBarry Smith -  y - the second vector
5909521ec69SBarry Smith 
591f5f57ec0SBarry Smith    Output Parameters:
5929521ec69SBarry Smith +  xv - location to put pointer to the first array
5939521ec69SBarry Smith -  yv - location to put pointer to the second array
5949521ec69SBarry Smith 
5959521ec69SBarry Smith    Level: developer
5969521ec69SBarry Smith 
597f5f57ec0SBarry Smith    Not available from Fortran
598f5f57ec0SBarry Smith 
5999521ec69SBarry Smith .seealso: VecGetArray(), VecGetArrayRead(), VecGetArrayPair()
6009521ec69SBarry Smith 
6019521ec69SBarry Smith @*/
602d9ca1df4SBarry Smith PETSC_STATIC_INLINE PetscErrorCode VecRestoreArrayPair(Vec x,Vec y,PetscScalar **xv,PetscScalar **yv)
603d9ca1df4SBarry Smith {
604d9ca1df4SBarry Smith   PetscErrorCode ierr;
605d9ca1df4SBarry Smith 
606d9ca1df4SBarry Smith   PetscFunctionBegin;
607d9ca1df4SBarry Smith   ierr = VecRestoreArray(y,yv);CHKERRQ(ierr);
608d9ca1df4SBarry Smith   if (x != y) {
609d9ca1df4SBarry Smith     ierr = VecRestoreArrayRead(x,(const PetscScalar **)xv);CHKERRQ(ierr);
610d9ca1df4SBarry Smith   }
611d9ca1df4SBarry Smith   PetscFunctionReturn(0);
612d9ca1df4SBarry Smith }
613d9ca1df4SBarry Smith 
614d9ca1df4SBarry Smith #if defined(PETSC_USE_DEBUG)
61538fecf7cSJunchao Zhang PETSC_EXTERN PetscErrorCode VecLockReadPush(Vec);
61638fecf7cSJunchao Zhang PETSC_EXTERN PetscErrorCode VecLockReadPop(Vec);
61738fecf7cSJunchao Zhang /* We also have a non-public VecLockWriteSet_Private() in vecimpl.h */
618d9ca1df4SBarry Smith PETSC_EXTERN PetscErrorCode VecLockGet(Vec,PetscInt*);
619da1c2f70SJunchao Zhang PETSC_STATIC_INLINE PetscErrorCode VecSetErrorIfLocked(Vec x,PetscInt arg)
620da1c2f70SJunchao Zhang {
621da1c2f70SJunchao Zhang   PetscInt       state;
622da1c2f70SJunchao Zhang   PetscErrorCode ierr;
62338fecf7cSJunchao Zhang 
624da1c2f70SJunchao Zhang   PetscFunctionBegin;
625da1c2f70SJunchao Zhang   ierr = VecLockGet(x,&state);CHKERRQ(ierr);
62685daa821SJacob Faibussowitsch   if (PetscUnlikely(state != 0)) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE," Vec is already locked for read-only or read/write access, argument # %" PetscInt_FMT,arg);
627da1c2f70SJunchao Zhang   PetscFunctionReturn(0);
628da1c2f70SJunchao Zhang }
62938fecf7cSJunchao Zhang /* The three are deprecated */
6305f1efc1aSLisandro Dalcin PETSC_EXTERN PETSC_DEPRECATED_FUNCTION("Use VecLockReadPush() (since version 3.11)") PetscErrorCode VecLockPush(Vec);
6315f1efc1aSLisandro Dalcin PETSC_EXTERN PETSC_DEPRECATED_FUNCTION("Use VecLockReadPop() (since version 3.11)")  PetscErrorCode VecLockPop(Vec);
632ed274036SLisandro Dalcin #define VecLocked(x,arg) VecSetErrorIfLocked(x,arg) PETSC_DEPRECATED_MACRO("GCC warning \"Use VecSetErrorIfLocked() (since version 3.11)\"")
633d9ca1df4SBarry Smith #else
63445fccdb2SJunchao Zhang #define VecLockReadPush(x)           0
63545fccdb2SJunchao Zhang #define VecLockReadPop(x)            0
63638fecf7cSJunchao Zhang #define VecLockGet(x,s)              *(s) = 0
63745fccdb2SJunchao Zhang #define VecSetErrorIfLocked(x,arg)   0
63838fecf7cSJunchao Zhang /* The three are deprecated */
63945fccdb2SJunchao Zhang #define VecLockPush(x)               0
64045fccdb2SJunchao Zhang #define VecLockPop(x)                0
64145fccdb2SJunchao Zhang #define VecLocked(x,arg)             0
642d9ca1df4SBarry Smith #endif
643e1fa1e0fSSatish Balay 
64462796dfbSBarry Smith PETSC_EXTERN PetscErrorCode VecValidValues(Vec,PetscInt,PetscBool);
645f7ecc322SBarry Smith 
64615091d37SBarry Smith /*
64715091d37SBarry Smith     These numbers need to match the entries in
6483c94ec11SBarry Smith   the function table in vecimpl.h
64915091d37SBarry Smith */
65092d03f5aSMatthew G. Knepley typedef enum { VECOP_DUPLICATE = 0, VECOP_VIEW = 33, VECOP_LOAD = 41, VECOP_VIEWNATIVE = 68, VECOP_LOADNATIVE = 69 } VecOperation;
651014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecSetOperation(Vec,VecOperation,void(*)(void));
652b19c1e4cSBarry Smith 
653e182c471SBarry Smith /*
654e182c471SBarry Smith      Routines for dealing with ghosted vectors:
655e182c471SBarry Smith   vectors with ghost elements at the end of the array.
656e182c471SBarry Smith */
657014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecMPISetGhost(Vec,PetscInt,const PetscInt[]);
658014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateGhost(MPI_Comm,PetscInt,PetscInt,PetscInt,const PetscInt[],Vec*);
659014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateGhostWithArray(MPI_Comm,PetscInt,PetscInt,PetscInt,const PetscInt[],const PetscScalar[],Vec*);
660014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateGhostBlock(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscInt,const PetscInt[],Vec*);
661014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateGhostBlockWithArray(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscInt,const PetscInt[],const PetscScalar[],Vec*);
662014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGhostGetLocalForm(Vec,Vec*);
663014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGhostRestoreLocalForm(Vec,Vec*);
6643efe6655SBarry Smith PETSC_EXTERN PetscErrorCode VecGhostIsLocalForm(Vec,Vec,PetscBool*);
665014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGhostUpdateBegin(Vec,InsertMode,ScatterMode);
666014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecGhostUpdateEnd(Vec,InsertMode,ScatterMode);
667e182c471SBarry Smith 
668014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecConjugate(Vec);
669c92e3469SBarry Smith PETSC_EXTERN PetscErrorCode VecImaginaryPart(Vec);
670c92e3469SBarry Smith PETSC_EXTERN PetscErrorCode VecRealPart(Vec);
67134233285SBarry Smith 
672014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterCreateToAll(Vec,VecScatter*,Vec*);
673014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecScatterCreateToZero(Vec,VecScatter*,Vec*);
674bba1ac68SSatish Balay 
6754473680cSBarry Smith PETSC_EXTERN PetscErrorCode ISComplementVec(IS,Vec,IS*);
6764473680cSBarry Smith PETSC_EXTERN PetscErrorCode VecPow(Vec, PetscScalar);
6774473680cSBarry Smith PETSC_EXTERN PetscErrorCode VecMedian(Vec, Vec, Vec, Vec);
678ce902467SBarry Smith PETSC_EXTERN PetscErrorCode VecWhichInactive(Vec, Vec, Vec, Vec, PetscBool, IS *);
6794473680cSBarry Smith PETSC_EXTERN PetscErrorCode VecWhichBetween(Vec, Vec, Vec, IS *);
6804473680cSBarry Smith PETSC_EXTERN PetscErrorCode VecWhichBetweenOrEqual(Vec, Vec, Vec, IS *);
6814473680cSBarry Smith PETSC_EXTERN PetscErrorCode VecWhichGreaterThan(Vec, Vec, IS *);
6824473680cSBarry Smith PETSC_EXTERN PetscErrorCode VecWhichLessThan(Vec, Vec, IS *);
6834473680cSBarry Smith PETSC_EXTERN PetscErrorCode VecWhichEqual(Vec, Vec, IS *);
6844473680cSBarry Smith PETSC_EXTERN PetscErrorCode VecISAXPY(Vec, IS, PetscScalar,Vec);
6858883cd90SMatthew G. Knepley PETSC_EXTERN PetscErrorCode VecISCopy(Vec, IS, ScatterMode, Vec);
6864473680cSBarry Smith PETSC_EXTERN PetscErrorCode VecISSet(Vec,IS, PetscScalar);
6874473680cSBarry Smith PETSC_EXTERN PetscErrorCode VecBoundGradientProjection(Vec, Vec, Vec, Vec, Vec);
6884473680cSBarry Smith PETSC_EXTERN PetscErrorCode VecStepBoundInfo(Vec,Vec,Vec,Vec,PetscReal*, PetscReal*,PetscReal*);
6894473680cSBarry Smith PETSC_EXTERN PetscErrorCode VecStepMax(Vec, Vec, PetscReal *);
6904473680cSBarry Smith PETSC_EXTERN PetscErrorCode VecStepMaxBounded(Vec,Vec,Vec,Vec,PetscReal*);
6914473680cSBarry Smith 
692014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscViewerMathematicaGetVector(PetscViewer, Vec);
693014dd563SJed Brown PETSC_EXTERN PetscErrorCode PetscViewerMathematicaPutVector(PetscViewer, Vec);
6947dbadf16SMatthew Knepley 
695d59c15a7SBarry Smith /*S
696d59c15a7SBarry Smith      Vecs - Collection of vectors where the data for the vectors is stored in
697759e7b9cSHong Zhang             one contiguous memory
698d59c15a7SBarry Smith 
699d59c15a7SBarry Smith    Level: advanced
700d59c15a7SBarry Smith 
701d59c15a7SBarry Smith    Notes:
702d59c15a7SBarry Smith     Temporary construct for handling multiply right hand side solves
703d59c15a7SBarry Smith 
704d59c15a7SBarry Smith     This is faked by storing a single vector that has enough array space for
705d59c15a7SBarry Smith     n vectors
706d59c15a7SBarry Smith 
707d59c15a7SBarry Smith S*/
70895fbd943SSatish Balay         struct _n_Vecs  {PetscInt n; Vec v;};
70995fbd943SSatish Balay typedef struct _n_Vecs* Vecs;
710e1317eeeSBarry Smith PETSC_EXTERN PetscErrorCode VecsDestroy(Vecs);
711e1317eeeSBarry Smith PETSC_EXTERN PetscErrorCode VecsCreateSeq(MPI_Comm,PetscInt,PetscInt,Vecs*);
712e1317eeeSBarry Smith PETSC_EXTERN PetscErrorCode VecsCreateSeqWithArray(MPI_Comm,PetscInt,PetscInt,PetscScalar*,Vecs*);
713e1317eeeSBarry Smith PETSC_EXTERN PetscErrorCode VecsDuplicate(Vecs,Vecs*);
714e9fa29b7SSatish Balay 
715e9e886b6SKarl Rupp #if defined(PETSC_HAVE_VIENNACL)
716b17c682bSKarl Rupp typedef struct _p_PetscViennaCLIndices* PetscViennaCLIndices;
717b17c682bSKarl Rupp PETSC_EXTERN PetscErrorCode PetscViennaCLIndicesCreate(PetscInt, PetscInt*,PetscInt, PetscInt*,PetscViennaCLIndices*);
718b17c682bSKarl Rupp PETSC_EXTERN PetscErrorCode PetscViennaCLIndicesDestroy(PetscViennaCLIndices*);
719b17c682bSKarl Rupp PETSC_EXTERN PetscErrorCode VecViennaCLCopyToGPUSome_Public(Vec,PetscViennaCLIndices);
720b17c682bSKarl Rupp PETSC_EXTERN PetscErrorCode VecViennaCLCopyFromGPUSome_Public(Vec,PetscViennaCLIndices);
721b17c682bSKarl Rupp PETSC_EXTERN PetscErrorCode VecCreateSeqViennaCL(MPI_Comm,PetscInt,Vec*);
722b17c682bSKarl Rupp PETSC_EXTERN PetscErrorCode VecCreateMPIViennaCL(MPI_Comm,PetscInt,PetscInt,Vec*);
723b8ced49eSKarl Rupp #endif
72459af0bd3SScott Kruger #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP)
72559af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecScatterInitializeForGPU(VecScatter,Vec);
72659af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecScatterFinalizeForGPU(VecScatter);
72759af0bd3SScott Kruger #endif
728fd314934SBarry Smith #if defined(PETSC_HAVE_CUDA)
72982f73ecaSAlejandro Lamas Daviña PETSC_EXTERN PetscErrorCode VecCreateSeqCUDA(MPI_Comm,PetscInt,Vec*);
73076d6722aSAlejandro Lamas Daviña PETSC_EXTERN PetscErrorCode VecCreateSeqCUDAWithArray(MPI_Comm,PetscInt,PetscInt,const PetscScalar*,Vec*);
731f94e795aSKaushik Kulkarni PETSC_EXTERN PetscErrorCode VecCreateSeqCUDAWithArrays(MPI_Comm,PetscInt,PetscInt,const PetscScalar*,const PetscScalar*,Vec*);
73282f73ecaSAlejandro Lamas Daviña PETSC_EXTERN PetscErrorCode VecCreateMPICUDA(MPI_Comm,PetscInt,PetscInt,Vec*);
73376d6722aSAlejandro Lamas Daviña PETSC_EXTERN PetscErrorCode VecCreateMPICUDAWithArray(MPI_Comm,PetscInt,PetscInt,PetscInt,const PetscScalar*,Vec*);
734f94e795aSKaushik Kulkarni PETSC_EXTERN PetscErrorCode VecCreateMPICUDAWithArrays(MPI_Comm,PetscInt,PetscInt,PetscInt,const PetscScalar*,const PetscScalar*,Vec*);
735b17c682bSKarl Rupp #endif
73659af0bd3SScott Kruger #if defined(PETSC_HAVE_HIP)
73759af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecCreateSeqHIP(MPI_Comm,PetscInt,Vec*);
73859af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecCreateSeqHIPWithArray(MPI_Comm,PetscInt,PetscInt,const PetscScalar*,Vec*);
73959af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecCreateSeqHIPWithArrays(MPI_Comm,PetscInt,PetscInt,const PetscScalar*,const PetscScalar*,Vec*);
74059af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecCreateMPIHIP(MPI_Comm,PetscInt,PetscInt,Vec*);
74159af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecCreateMPIHIPWithArray(MPI_Comm,PetscInt,PetscInt,PetscInt,const PetscScalar*,Vec*);
74259af0bd3SScott Kruger PETSC_EXTERN PetscErrorCode VecCreateMPIHIPWithArrays(MPI_Comm,PetscInt,PetscInt,PetscInt,const PetscScalar*,const PetscScalar*,Vec*);
74359af0bd3SScott Kruger #endif
7441e8b6502SStefano Zampini #if defined(PETSC_HAVE_KOKKOS_KERNELS)
7451e8b6502SStefano Zampini PETSC_EXTERN PetscErrorCode VecCreateSeqKokkos(MPI_Comm,PetscInt,Vec*);
7461e8b6502SStefano Zampini PETSC_EXTERN PetscErrorCode VecCreateSeqKokkosWithArray(MPI_Comm,PetscInt,PetscInt,const PetscScalar*,Vec*);
7471e8b6502SStefano Zampini PETSC_EXTERN PetscErrorCode VecCreateMPIKokkos(MPI_Comm,PetscInt,PetscInt,Vec*);
7481e8b6502SStefano Zampini PETSC_EXTERN PetscErrorCode VecCreateMPIKokkosWithArray(MPI_Comm,PetscInt,PetscInt,PetscInt,const PetscScalar*,Vec*);
7491e8b6502SStefano Zampini #endif
750b17c682bSKarl Rupp 
751014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNestGetSubVecs(Vec,PetscInt*,Vec**);
752014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNestGetSubVec(Vec,PetscInt,Vec*);
753014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNestSetSubVecs(Vec,PetscInt,PetscInt*,Vec*);
754014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNestSetSubVec(Vec,PetscInt,Vec);
755014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecCreateNest(MPI_Comm,PetscInt,IS*,Vec*,Vec*);
756014dd563SJed Brown PETSC_EXTERN PetscErrorCode VecNestGetSize(Vec,PetscInt*);
75745b63f25SDmitry Karpeev 
758c5929fdfSBarry Smith PETSC_EXTERN PetscErrorCode PetscOptionsGetVec(PetscOptions,const char[],const char[],Vec,PetscBool*);
7594325cce7SMatthew G Knepley PETSC_EXTERN PetscErrorCode VecChop(Vec,PetscReal);
760ab352700SBarry Smith 
761077aedafSJed Brown PETSC_EXTERN PetscErrorCode VecGetLayout(Vec,PetscLayout*);
762077aedafSJed Brown PETSC_EXTERN PetscErrorCode VecSetLayout(Vec,PetscLayout);
7639a6d0b0bSJed Brown 
7649a6d0b0bSJed Brown PETSC_EXTERN PetscErrorCode PetscSectionVecView(PetscSection, Vec, PetscViewer);
7659a6d0b0bSJed Brown PETSC_EXTERN PetscErrorCode VecGetValuesSection(Vec, PetscSection, PetscInt, PetscScalar **);
7669a6d0b0bSJed Brown PETSC_EXTERN PetscErrorCode VecSetValuesSection(Vec, PetscSection, PetscInt, PetscScalar [], InsertMode);
76722d96a0cSMatthew G. Knepley PETSC_EXTERN PetscErrorCode PetscSectionVecNorm(PetscSection, PetscSection, Vec, NormType, PetscReal []);
7689a6d0b0bSJed Brown 
7695543aaa0SToby Isaac /*S
7705543aaa0SToby Isaac   VecTagger - Object used to manage the tagging of a subset of indices based on the values of a vector.  The
7715543aaa0SToby Isaac               motivating application is the selection of cells for refinement or coarsening based on vector containing
7725543aaa0SToby Isaac               the values in an error indicator metric.
7735543aaa0SToby Isaac 
7745543aaa0SToby Isaac   Level: advanced
7755543aaa0SToby Isaac S*/
77661bbf837SToby Isaac typedef struct _p_VecTagger *VecTagger;
7775543aaa0SToby Isaac 
7785543aaa0SToby Isaac /*J
7795543aaa0SToby Isaac   VecTaggerType - String with the name of a VecTagger type
7805543aaa0SToby Isaac 
7815543aaa0SToby Isaac   Level: advanced
7825543aaa0SToby Isaac J*/
7835543aaa0SToby Isaac typedef const char* VecTaggerType;
7844178c1b7SToby Isaac /* tag where the vector values are in a box of explicitly defined values */
785cab77d58SToby Isaac #define VECTAGGERABSOLUTE   "absolute"
7864178c1b7SToby Isaac /* tag where the vector values are in a box of values relative to the set of all values in the vector */
7875543aaa0SToby Isaac #define VECTAGGERRELATIVE   "relative"
7885543aaa0SToby Isaac /* tag where the vector values are in a relative range of the *cumulative distribution* of values in the vector */
7891d1d0dd8SToby Isaac #define VECTAGGERCDF        "cdf"
7905543aaa0SToby Isaac /* tag a vector as the union of other tags */
7915543aaa0SToby Isaac #define VECTAGGEROR         "or"
7925543aaa0SToby Isaac /* tag a vector as the intersection of other tags */
7935543aaa0SToby Isaac #define VECTAGGERAND        "and"
7945543aaa0SToby Isaac 
7955543aaa0SToby Isaac PETSC_EXTERN PetscClassId VEC_TAGGER_CLASSID;
79661bbf837SToby Isaac PETSC_EXTERN PetscFunctionList VecTaggerList;
79761bbf837SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerRegister(const char[],PetscErrorCode (*) (VecTagger));
7985543aaa0SToby Isaac 
7995543aaa0SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerCreate(MPI_Comm,VecTagger *);
800cab77d58SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerSetBlockSize(VecTagger,PetscInt);
801cab77d58SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerGetBlockSize(VecTagger,PetscInt*);
8025543aaa0SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerSetType(VecTagger,VecTaggerType);
8035543aaa0SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerGetType(VecTagger,VecTaggerType *);
8045543aaa0SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerSetInvert(VecTagger,PetscBool);
8055543aaa0SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerGetInvert(VecTagger,PetscBool*);
8065543aaa0SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerSetFromOptions(VecTagger);
8075543aaa0SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerSetUp(VecTagger);
8085543aaa0SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerView(VecTagger,PetscViewer);
8091cee10b1SBarry Smith PETSC_EXTERN PetscErrorCode VecTaggerComputeIS(VecTagger,Vec,IS *,PetscBool*);
8105543aaa0SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerDestroy(VecTagger *);
8115543aaa0SToby Isaac 
8124178c1b7SToby Isaac /*S
8134178c1b7SToby Isaac    VecTaggerBox - A box range used to tag values.  For real scalars, this is just a closed interval; for complex scalars, the box is the closed region in the complex plane
8144178c1b7SToby Isaac    such that real(min) <= real(z) <= real(max) and imag(min) <= imag(z) <= imag(max).  INF is an acceptable endpoint.
81561bbf837SToby Isaac 
8164178c1b7SToby Isaac    Level: beginner
81761bbf837SToby Isaac 
8184178c1b7SToby Isaac .seealso: VecTaggerComputeIntervals()
8194178c1b7SToby Isaac S*/
8204178c1b7SToby Isaac typedef struct {
8214178c1b7SToby Isaac   PetscScalar min;
8224178c1b7SToby Isaac   PetscScalar max;
8234178c1b7SToby Isaac } VecTaggerBox;
8241cee10b1SBarry Smith PETSC_EXTERN PetscErrorCode VecTaggerComputeBoxes(VecTagger,Vec,PetscInt *,VecTaggerBox **,PetscBool*);
8254178c1b7SToby Isaac 
8264178c1b7SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerAbsoluteSetBox(VecTagger,VecTaggerBox *);
8274178c1b7SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerAbsoluteGetBox(VecTagger,const VecTaggerBox **);
8284178c1b7SToby Isaac 
8294178c1b7SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerRelativeSetBox(VecTagger,VecTaggerBox *);
8304178c1b7SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerRelativeGetBox(VecTagger,const VecTaggerBox **);
8314178c1b7SToby Isaac 
8324178c1b7SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerCDFSetBox(VecTagger,VecTaggerBox *);
8334178c1b7SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerCDFGetBox(VecTagger,const VecTaggerBox **);
8341d1d0dd8SToby Isaac 
8351d1d0dd8SToby Isaac /*E
8361d1d0dd8SToby Isaac   VecTaggerCDFMethod - Determines what method is used to compute absolute values from cumulative distribution values (e.g., what value is the preimage of .95 in the cdf).  Relevant only in parallel: in serial it is directly computed.
8371d1d0dd8SToby Isaac 
8381d1d0dd8SToby Isaac   Level: advanced
8391d1d0dd8SToby Isaac .seealso: VecTaggerCDFSetMethod(), VecTaggerCDFMethods
8401d1d0dd8SToby Isaac E*/
8411d1d0dd8SToby Isaac typedef enum {VECTAGGER_CDF_GATHER,VECTAGGER_CDF_ITERATIVE,VECTAGGER_CDF_NUM_METHODS} VecTaggerCDFMethod;
8421d1d0dd8SToby Isaac PETSC_EXTERN const char *const VecTaggerCDFMethods[];
8431d1d0dd8SToby Isaac 
8441d1d0dd8SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerCDFSetMethod(VecTagger,VecTaggerCDFMethod);
8451d1d0dd8SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerCDFGetMethod(VecTagger,VecTaggerCDFMethod*);
8461d1d0dd8SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerCDFIterativeSetTolerances(VecTagger,PetscInt,PetscReal,PetscReal);
8471d1d0dd8SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerCDFIterativeGetTolerances(VecTagger,PetscInt*,PetscReal*,PetscReal*);
84861bbf837SToby Isaac 
849497ee004SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerOrSetSubs(VecTagger,PetscInt,VecTagger*,PetscCopyMode);
850497ee004SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerOrGetSubs(VecTagger,PetscInt*,VecTagger**);
85161bbf837SToby Isaac 
852497ee004SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerAndSetSubs(VecTagger,PetscInt,VecTagger*,PetscCopyMode);
853497ee004SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerAndGetSubs(VecTagger,PetscInt*,VecTagger**);
85461bbf837SToby Isaac 
85561bbf837SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerInitializePackage(void);
85661bbf837SToby Isaac PETSC_EXTERN PetscErrorCode VecTaggerFinalizePackage(void);
85761bbf837SToby Isaac 
8582eac72dbSBarry Smith #endif
859