xref: /petsc/src/dm/impls/composite/pack.c (revision 0c010503e280889cfcd2455cff2d09d8471c4db0)
147c6ae99SBarry Smith #define PETSCDM_DLL
247c6ae99SBarry Smith 
347c6ae99SBarry Smith #include "petscda.h"             /*I      "petscda.h"     I*/
447c6ae99SBarry Smith #include "private/dmimpl.h"
547c6ae99SBarry Smith #include "petscmat.h"
647c6ae99SBarry Smith 
747c6ae99SBarry Smith /*
847c6ae99SBarry Smith    rstart is where an array/subvector starts in the global parallel vector, so arrays
947c6ae99SBarry Smith    rstarts are meaningless (and set to the previous one) except on the processor where the array lives
1047c6ae99SBarry Smith */
1147c6ae99SBarry Smith 
1247c6ae99SBarry Smith typedef enum {DMCOMPOSITE_ARRAY, DMCOMPOSITE_DM} DMCompositeLinkType;
1347c6ae99SBarry Smith 
1447c6ae99SBarry Smith struct DMCompositeLink {
1547c6ae99SBarry Smith   DMCompositeLinkType    type;
1647c6ae99SBarry Smith   struct DMCompositeLink *next;
1747c6ae99SBarry Smith   PetscInt               n,rstart;      /* rstart is relative to this process */
1847c6ae99SBarry Smith   PetscInt               grstart;       /* grstart is relative to all processes */
1947c6ae99SBarry Smith 
2047c6ae99SBarry Smith   /* only used for DMCOMPOSITE_DM */
2147c6ae99SBarry Smith   PetscInt               *grstarts;     /* global row for first unknown of this DM on each process */
2247c6ae99SBarry Smith   DM                     dm;
2347c6ae99SBarry Smith 
2447c6ae99SBarry Smith   /* only used for DMCOMPOSITE_ARRAY */
2547c6ae99SBarry Smith   PetscMPIInt            rank;          /* process where array unknowns live */
2647c6ae99SBarry Smith };
2747c6ae99SBarry Smith 
2847c6ae99SBarry Smith typedef struct {
2947c6ae99SBarry Smith   PetscInt               n,N,rstart;           /* rstart is relative to all processors, n unknowns owned by this process, N is total unknowns */
3047c6ae99SBarry Smith   PetscInt               nghost;               /* number of all local entries include DA ghost points and any shared redundant arrays */
3147c6ae99SBarry Smith   PetscInt               nDM,nredundant,nmine; /* how many DM's and seperate redundant arrays used to build DM(nmine is ones on this process) */
3247c6ae99SBarry Smith   PetscBool              setup;                /* after this is set, cannot add new links to the DM*/
3347c6ae99SBarry Smith   struct DMCompositeLink *next;
3447c6ae99SBarry Smith 
3547c6ae99SBarry Smith   PetscErrorCode (*FormCoupleLocations)(DM,Mat,PetscInt*,PetscInt*,PetscInt,PetscInt,PetscInt,PetscInt);
3647c6ae99SBarry Smith } DM_Composite;
3747c6ae99SBarry Smith 
3847c6ae99SBarry Smith #undef __FUNCT__
3947c6ae99SBarry Smith #define __FUNCT__ "DMCompositeSetCoupling"
4047c6ae99SBarry Smith /*@C
4147c6ae99SBarry Smith     DMCompositeSetCoupling - Sets user provided routines that compute the coupling between the
4247c6ae99SBarry Smith       seperate components (DA's and arrays) in a DMto build the correct matrix nonzero structure.
4347c6ae99SBarry Smith 
4447c6ae99SBarry Smith 
4547c6ae99SBarry Smith     Logically Collective on MPI_Comm
4647c6ae99SBarry Smith 
4747c6ae99SBarry Smith     Input Parameter:
4847c6ae99SBarry Smith +   dm - the composite object
4947c6ae99SBarry Smith -   formcouplelocations - routine to set the nonzero locations in the matrix
5047c6ae99SBarry Smith 
5147c6ae99SBarry Smith     Level: advanced
5247c6ae99SBarry Smith 
5347c6ae99SBarry Smith     Notes: See DMCompositeSetContext() and DMCompositeGetContext() for how to get user information into
5447c6ae99SBarry Smith         this routine
5547c6ae99SBarry Smith 
5647c6ae99SBarry Smith @*/
5747c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeSetCoupling(DM dm,PetscErrorCode (*FormCoupleLocations)(DM,Mat,PetscInt*,PetscInt*,PetscInt,PetscInt,PetscInt,PetscInt))
5847c6ae99SBarry Smith {
5947c6ae99SBarry Smith   DM_Composite *com = (DM_Composite*)dm->data;
6047c6ae99SBarry Smith 
6147c6ae99SBarry Smith   PetscFunctionBegin;
6247c6ae99SBarry Smith   com->FormCoupleLocations = FormCoupleLocations;
6347c6ae99SBarry Smith   PetscFunctionReturn(0);
6447c6ae99SBarry Smith }
6547c6ae99SBarry Smith 
6647c6ae99SBarry Smith #undef __FUNCT__
6747c6ae99SBarry Smith #define __FUNCT__ "DMCompositeSetContext"
6847c6ae99SBarry Smith /*@
6947c6ae99SBarry Smith     DMCompositeSetContext - Allows user to stash data they may need within the form coupling routine they
7047c6ae99SBarry Smith       set with DMCompositeSetCoupling()
7147c6ae99SBarry Smith 
7247c6ae99SBarry Smith 
7347c6ae99SBarry Smith     Not Collective
7447c6ae99SBarry Smith 
7547c6ae99SBarry Smith     Input Parameter:
7647c6ae99SBarry Smith +   dm - the composite object
7747c6ae99SBarry Smith -   ctx - the user supplied context
7847c6ae99SBarry Smith 
7947c6ae99SBarry Smith     Level: advanced
8047c6ae99SBarry Smith 
8147c6ae99SBarry Smith     Notes: Use DMCompositeGetContext() to retrieve the context when needed.
8247c6ae99SBarry Smith 
8347c6ae99SBarry Smith @*/
8447c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeSetContext(DM dm,void *ctx)
8547c6ae99SBarry Smith {
8647c6ae99SBarry Smith   PetscFunctionBegin;
8747c6ae99SBarry Smith   dm->ctx = ctx;
8847c6ae99SBarry Smith   PetscFunctionReturn(0);
8947c6ae99SBarry Smith }
9047c6ae99SBarry Smith 
9147c6ae99SBarry Smith #undef __FUNCT__
9247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetContext"
9347c6ae99SBarry Smith /*@
9447c6ae99SBarry Smith     DMCompositeGetContext - Access the context set with DMCompositeSetContext()
9547c6ae99SBarry Smith 
9647c6ae99SBarry Smith 
9747c6ae99SBarry Smith     Not Collective
9847c6ae99SBarry Smith 
9947c6ae99SBarry Smith     Input Parameter:
10047c6ae99SBarry Smith .   dm - the composite object
10147c6ae99SBarry Smith 
10247c6ae99SBarry Smith     Output Parameter:
10347c6ae99SBarry Smith .    ctx - the user supplied context
10447c6ae99SBarry Smith 
10547c6ae99SBarry Smith     Level: advanced
10647c6ae99SBarry Smith 
10747c6ae99SBarry Smith     Notes: Use DMCompositeGetContext() to retrieve the context when needed.
10847c6ae99SBarry Smith 
10947c6ae99SBarry Smith @*/
11047c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGetContext(DM dm,void **ctx)
11147c6ae99SBarry Smith {
11247c6ae99SBarry Smith   PetscFunctionBegin;
11347c6ae99SBarry Smith   *ctx = dm->ctx;
11447c6ae99SBarry Smith   PetscFunctionReturn(0);
11547c6ae99SBarry Smith }
11647c6ae99SBarry Smith 
11747c6ae99SBarry Smith 
11847c6ae99SBarry Smith 
11947c6ae99SBarry Smith extern PetscErrorCode DMDestroy_Private(DM,PetscBool *);
12047c6ae99SBarry Smith 
12147c6ae99SBarry Smith #undef __FUNCT__
122*0c010503SBarry Smith #define __FUNCT__ "DMDestroy_Composite"
123*0c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMDestroy_Composite(DM dm)
12447c6ae99SBarry Smith {
12547c6ae99SBarry Smith   PetscErrorCode         ierr;
12647c6ae99SBarry Smith   struct DMCompositeLink *next, *prev;
12747c6ae99SBarry Smith   PetscBool              done;
12847c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite *)dm->data;
12947c6ae99SBarry Smith 
13047c6ae99SBarry Smith   PetscFunctionBegin;
13147c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
13247c6ae99SBarry Smith   ierr = DMDestroy_Private((DM)dm,&done);CHKERRQ(ierr);
13347c6ae99SBarry Smith   if (!done) PetscFunctionReturn(0);
13447c6ae99SBarry Smith 
13547c6ae99SBarry Smith   next = com->next;
13647c6ae99SBarry Smith   while (next) {
13747c6ae99SBarry Smith     prev = next;
13847c6ae99SBarry Smith     next = next->next;
13947c6ae99SBarry Smith     if (prev->type == DMCOMPOSITE_DM) {
14047c6ae99SBarry Smith       ierr = DMDestroy(prev->dm);CHKERRQ(ierr);
14147c6ae99SBarry Smith     }
14247c6ae99SBarry Smith     if (prev->grstarts) {
14347c6ae99SBarry Smith       ierr = PetscFree(prev->grstarts);CHKERRQ(ierr);
14447c6ae99SBarry Smith     }
14547c6ae99SBarry Smith     ierr = PetscFree(prev);CHKERRQ(ierr);
14647c6ae99SBarry Smith   }
14747c6ae99SBarry Smith   ierr = PetscFree(com);CHKERRQ(ierr);
14847c6ae99SBarry Smith   ierr = PetscHeaderDestroy(dm);CHKERRQ(ierr);
14947c6ae99SBarry Smith   PetscFunctionReturn(0);
15047c6ae99SBarry Smith }
15147c6ae99SBarry Smith 
15247c6ae99SBarry Smith #undef __FUNCT__
153*0c010503SBarry Smith #define __FUNCT__ "DMView_Composite"
154*0c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMView_Composite(DM dm,PetscViewer v)
15547c6ae99SBarry Smith {
15647c6ae99SBarry Smith   PetscErrorCode ierr;
15747c6ae99SBarry Smith   PetscBool      iascii;
15847c6ae99SBarry Smith   DM_Composite   *com = (DM_Composite *)dm->data;
15947c6ae99SBarry Smith 
16047c6ae99SBarry Smith   PetscFunctionBegin;
16147c6ae99SBarry Smith   ierr = PetscTypeCompare((PetscObject)v,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
16247c6ae99SBarry Smith   if (iascii) {
16347c6ae99SBarry Smith     struct DMCompositeLink *lnk = com->next;
16447c6ae99SBarry Smith     PetscInt               i;
16547c6ae99SBarry Smith 
16647c6ae99SBarry Smith     ierr = PetscViewerASCIIPrintf(v,"DM (%s)\n",((PetscObject)dm)->prefix?((PetscObject)dm)->prefix:"no prefix");CHKERRQ(ierr);
16747c6ae99SBarry Smith     ierr = PetscViewerASCIIPrintf(v,"  contains %d DMs and %d redundant arrays\n",com->nDM,com->nredundant);CHKERRQ(ierr);
16847c6ae99SBarry Smith     ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr);
16947c6ae99SBarry Smith     for (i=0; lnk; lnk=lnk->next,i++) {
17047c6ae99SBarry Smith       if (lnk->dm) {
17147c6ae99SBarry Smith         ierr = PetscViewerASCIIPrintf(v,"Link %d: DM of type %s\n",i,((PetscObject)lnk->dm)->type_name);CHKERRQ(ierr);
17247c6ae99SBarry Smith         ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr);
17347c6ae99SBarry Smith         ierr = DMView(lnk->dm,v);CHKERRQ(ierr);
17447c6ae99SBarry Smith         ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr);
17547c6ae99SBarry Smith       } else {
17647c6ae99SBarry Smith         ierr = PetscViewerASCIIPrintf(v,"Link %d: Redundant array of size %d owned by rank %d\n",i,lnk->n,lnk->rank);CHKERRQ(ierr);
17747c6ae99SBarry Smith       }
17847c6ae99SBarry Smith     }
17947c6ae99SBarry Smith     ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr);
18047c6ae99SBarry Smith   }
18147c6ae99SBarry Smith   PetscFunctionReturn(0);
18247c6ae99SBarry Smith }
18347c6ae99SBarry Smith 
18447c6ae99SBarry Smith /* --------------------------------------------------------------------------------------*/
18547c6ae99SBarry Smith #undef __FUNCT__
18647c6ae99SBarry Smith #define __FUNCT__ "DMCompositeSetUp"
18747c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeSetUp(DM dm)
18847c6ae99SBarry Smith {
18947c6ae99SBarry Smith   PetscErrorCode         ierr;
19047c6ae99SBarry Smith   PetscInt               nprev = 0;
19147c6ae99SBarry Smith   PetscMPIInt            rank,size;
19247c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
19347c6ae99SBarry Smith   struct DMCompositeLink *next = com->next;
19447c6ae99SBarry Smith   PetscLayout            map;
19547c6ae99SBarry Smith 
19647c6ae99SBarry Smith   PetscFunctionBegin;
19747c6ae99SBarry Smith   if (com->setup) SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_ARG_WRONGSTATE,"Packer has already been setup");
19847c6ae99SBarry Smith   ierr = PetscLayoutCreate(((PetscObject)dm)->comm,&map);CHKERRQ(ierr);
19947c6ae99SBarry Smith   ierr = PetscLayoutSetLocalSize(map,com->n);CHKERRQ(ierr);
20047c6ae99SBarry Smith   ierr = PetscLayoutSetSize(map,PETSC_DETERMINE);CHKERRQ(ierr);
20147c6ae99SBarry Smith   ierr = PetscLayoutSetBlockSize(map,1);CHKERRQ(ierr);
20247c6ae99SBarry Smith   ierr = PetscLayoutSetUp(map);CHKERRQ(ierr);
20347c6ae99SBarry Smith   ierr = PetscLayoutGetSize(map,&com->N);CHKERRQ(ierr);
20447c6ae99SBarry Smith   ierr = PetscLayoutGetRange(map,&com->rstart,PETSC_NULL);CHKERRQ(ierr);
20547c6ae99SBarry Smith   ierr = PetscLayoutDestroy(map);CHKERRQ(ierr);
20647c6ae99SBarry Smith 
20747c6ae99SBarry Smith   /* now set the rstart for each linked array/vector */
20847c6ae99SBarry Smith   ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr);
20947c6ae99SBarry Smith   ierr = MPI_Comm_size(((PetscObject)dm)->comm,&size);CHKERRQ(ierr);
21047c6ae99SBarry Smith   while (next) {
21147c6ae99SBarry Smith     next->rstart = nprev;
21247c6ae99SBarry Smith     if ((rank == next->rank) || next->type != DMCOMPOSITE_ARRAY) nprev += next->n;
21347c6ae99SBarry Smith     next->grstart = com->rstart + next->rstart;
21447c6ae99SBarry Smith     if (next->type == DMCOMPOSITE_ARRAY) {
21547c6ae99SBarry Smith       ierr = MPI_Bcast(&next->grstart,1,MPIU_INT,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr);
21647c6ae99SBarry Smith     } else {
21747c6ae99SBarry Smith       ierr = PetscMalloc(size*sizeof(PetscInt),&next->grstarts);CHKERRQ(ierr);
21847c6ae99SBarry Smith       ierr = MPI_Allgather(&next->grstart,1,MPIU_INT,next->grstarts,1,MPIU_INT,((PetscObject)dm)->comm);CHKERRQ(ierr);
21947c6ae99SBarry Smith     }
22047c6ae99SBarry Smith     next = next->next;
22147c6ae99SBarry Smith   }
22247c6ae99SBarry Smith   com->setup = PETSC_TRUE;
22347c6ae99SBarry Smith   PetscFunctionReturn(0);
22447c6ae99SBarry Smith }
22547c6ae99SBarry Smith 
22647c6ae99SBarry Smith 
22747c6ae99SBarry Smith #undef __FUNCT__
22847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess_Array"
22947c6ae99SBarry Smith PetscErrorCode DMCompositeGetAccess_Array(DM dm,struct DMCompositeLink *mine,Vec vec,PetscScalar **array)
23047c6ae99SBarry Smith {
23147c6ae99SBarry Smith   PetscErrorCode ierr;
23247c6ae99SBarry Smith   PetscScalar    *varray;
23347c6ae99SBarry Smith   PetscMPIInt    rank;
23447c6ae99SBarry Smith 
23547c6ae99SBarry Smith   PetscFunctionBegin;
23647c6ae99SBarry Smith   ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr);
23747c6ae99SBarry Smith   if (array) {
23847c6ae99SBarry Smith     if (rank == mine->rank) {
23947c6ae99SBarry Smith       ierr    = VecGetArray(vec,&varray);CHKERRQ(ierr);
24047c6ae99SBarry Smith       *array  = varray + mine->rstart;
24147c6ae99SBarry Smith       ierr    = VecRestoreArray(vec,&varray);CHKERRQ(ierr);
24247c6ae99SBarry Smith     } else {
24347c6ae99SBarry Smith       *array = 0;
24447c6ae99SBarry Smith     }
24547c6ae99SBarry Smith   }
24647c6ae99SBarry Smith   PetscFunctionReturn(0);
24747c6ae99SBarry Smith }
24847c6ae99SBarry Smith 
24947c6ae99SBarry Smith #undef __FUNCT__
25047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess_DM"
25147c6ae99SBarry Smith PetscErrorCode DMCompositeGetAccess_DM(DM dm,struct DMCompositeLink *mine,Vec vec,Vec *global)
25247c6ae99SBarry Smith {
25347c6ae99SBarry Smith   PetscErrorCode ierr;
25447c6ae99SBarry Smith   PetscScalar    *array;
25547c6ae99SBarry Smith 
25647c6ae99SBarry Smith   PetscFunctionBegin;
25747c6ae99SBarry Smith   if (global) {
25847c6ae99SBarry Smith     ierr    = DMGetGlobalVector(mine->dm,global);CHKERRQ(ierr);
25947c6ae99SBarry Smith     ierr    = VecGetArray(vec,&array);CHKERRQ(ierr);
26047c6ae99SBarry Smith     ierr    = VecPlaceArray(*global,array+mine->rstart);CHKERRQ(ierr);
26147c6ae99SBarry Smith     ierr    = VecRestoreArray(vec,&array);CHKERRQ(ierr);
26247c6ae99SBarry Smith   }
26347c6ae99SBarry Smith   PetscFunctionReturn(0);
26447c6ae99SBarry Smith }
26547c6ae99SBarry Smith 
26647c6ae99SBarry Smith #undef __FUNCT__
26747c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess_Array"
26847c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreAccess_Array(DM dm,struct DMCompositeLink *mine,Vec vec,PetscScalar **array)
26947c6ae99SBarry Smith {
27047c6ae99SBarry Smith   PetscFunctionBegin;
27147c6ae99SBarry Smith   PetscFunctionReturn(0);
27247c6ae99SBarry Smith }
27347c6ae99SBarry Smith 
27447c6ae99SBarry Smith #undef __FUNCT__
27547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess_DM"
27647c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreAccess_DM(DM dm,struct DMCompositeLink *mine,Vec vec,Vec *global)
27747c6ae99SBarry Smith {
27847c6ae99SBarry Smith   PetscErrorCode ierr;
27947c6ae99SBarry Smith 
28047c6ae99SBarry Smith   PetscFunctionBegin;
28147c6ae99SBarry Smith   if (global) {
28247c6ae99SBarry Smith     ierr = VecResetArray(*global);CHKERRQ(ierr);
28347c6ae99SBarry Smith     ierr = DMRestoreGlobalVector(mine->dm,global);CHKERRQ(ierr);
28447c6ae99SBarry Smith   }
28547c6ae99SBarry Smith   PetscFunctionReturn(0);
28647c6ae99SBarry Smith }
28747c6ae99SBarry Smith 
28847c6ae99SBarry Smith #undef __FUNCT__
28947c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter_Array"
29047c6ae99SBarry Smith PetscErrorCode DMCompositeScatter_Array(DM dm,struct DMCompositeLink *mine,Vec vec,PetscScalar *array)
29147c6ae99SBarry Smith {
29247c6ae99SBarry Smith   PetscErrorCode ierr;
29347c6ae99SBarry Smith   PetscScalar    *varray;
29447c6ae99SBarry Smith   PetscMPIInt    rank;
29547c6ae99SBarry Smith 
29647c6ae99SBarry Smith   PetscFunctionBegin;
29747c6ae99SBarry Smith   ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr);
29847c6ae99SBarry Smith   if (rank == mine->rank) {
29947c6ae99SBarry Smith     ierr    = VecGetArray(vec,&varray);CHKERRQ(ierr);
30047c6ae99SBarry Smith     ierr    = PetscMemcpy(array,varray+mine->rstart,mine->n*sizeof(PetscScalar));CHKERRQ(ierr);
30147c6ae99SBarry Smith     ierr    = VecRestoreArray(vec,&varray);CHKERRQ(ierr);
30247c6ae99SBarry Smith   }
30347c6ae99SBarry Smith   ierr    = MPI_Bcast(array,mine->n,MPIU_SCALAR,mine->rank,((PetscObject)dm)->comm);CHKERRQ(ierr);
30447c6ae99SBarry Smith   PetscFunctionReturn(0);
30547c6ae99SBarry Smith }
30647c6ae99SBarry Smith 
30747c6ae99SBarry Smith #undef __FUNCT__
30847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter_DM"
30947c6ae99SBarry Smith PetscErrorCode DMCompositeScatter_DM(DM dm,struct DMCompositeLink *mine,Vec vec,Vec local)
31047c6ae99SBarry Smith {
31147c6ae99SBarry Smith   PetscErrorCode ierr;
31247c6ae99SBarry Smith   PetscScalar    *array;
31347c6ae99SBarry Smith   Vec            global;
31447c6ae99SBarry Smith 
31547c6ae99SBarry Smith   PetscFunctionBegin;
31647c6ae99SBarry Smith   ierr = DMGetGlobalVector(mine->dm,&global);CHKERRQ(ierr);
31747c6ae99SBarry Smith   ierr = VecGetArray(vec,&array);CHKERRQ(ierr);
31847c6ae99SBarry Smith   ierr = VecPlaceArray(global,array+mine->rstart);CHKERRQ(ierr);
31947c6ae99SBarry Smith   ierr = DMGlobalToLocalBegin(mine->dm,global,INSERT_VALUES,local);CHKERRQ(ierr);
32047c6ae99SBarry Smith   ierr = DMGlobalToLocalEnd(mine->dm,global,INSERT_VALUES,local);CHKERRQ(ierr);
32147c6ae99SBarry Smith   ierr = VecRestoreArray(vec,&array);CHKERRQ(ierr);
32247c6ae99SBarry Smith   ierr = VecResetArray(global);CHKERRQ(ierr);
32347c6ae99SBarry Smith   ierr = DMRestoreGlobalVector(mine->dm,&global);CHKERRQ(ierr);
32447c6ae99SBarry Smith   PetscFunctionReturn(0);
32547c6ae99SBarry Smith }
32647c6ae99SBarry Smith 
32747c6ae99SBarry Smith #undef __FUNCT__
32847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather_Array"
32947c6ae99SBarry Smith PetscErrorCode DMCompositeGather_Array(DM dm,struct DMCompositeLink *mine,Vec vec,PetscScalar *array)
33047c6ae99SBarry Smith {
33147c6ae99SBarry Smith   PetscErrorCode ierr;
33247c6ae99SBarry Smith   PetscScalar    *varray;
33347c6ae99SBarry Smith   PetscMPIInt    rank;
33447c6ae99SBarry Smith 
33547c6ae99SBarry Smith   PetscFunctionBegin;
33647c6ae99SBarry Smith   ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr);
33747c6ae99SBarry Smith   if (rank == mine->rank) {
33847c6ae99SBarry Smith     ierr    = VecGetArray(vec,&varray);CHKERRQ(ierr);
33947c6ae99SBarry Smith     if (varray+mine->rstart == array) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"You need not DMCompositeGather() into objects obtained via DMCompositeGetAccess()");
34047c6ae99SBarry Smith     ierr    = PetscMemcpy(varray+mine->rstart,array,mine->n*sizeof(PetscScalar));CHKERRQ(ierr);
34147c6ae99SBarry Smith     ierr    = VecRestoreArray(vec,&varray);CHKERRQ(ierr);
34247c6ae99SBarry Smith   }
34347c6ae99SBarry Smith   PetscFunctionReturn(0);
34447c6ae99SBarry Smith }
34547c6ae99SBarry Smith 
34647c6ae99SBarry Smith #undef __FUNCT__
34747c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather_DM"
34847c6ae99SBarry Smith PetscErrorCode DMCompositeGather_DM(DM dm,struct DMCompositeLink *mine,Vec vec,Vec local)
34947c6ae99SBarry Smith {
35047c6ae99SBarry Smith   PetscErrorCode ierr;
35147c6ae99SBarry Smith   PetscScalar    *array;
35247c6ae99SBarry Smith   Vec            global;
35347c6ae99SBarry Smith 
35447c6ae99SBarry Smith   PetscFunctionBegin;
35547c6ae99SBarry Smith   ierr = DMGetGlobalVector(mine->dm,&global);CHKERRQ(ierr);
35647c6ae99SBarry Smith   ierr = VecGetArray(vec,&array);CHKERRQ(ierr);
35747c6ae99SBarry Smith   ierr = VecPlaceArray(global,array+mine->rstart);CHKERRQ(ierr);
35847c6ae99SBarry Smith   ierr = DMLocalToGlobal(mine->dm,local,INSERT_VALUES,global);CHKERRQ(ierr);
35947c6ae99SBarry Smith   ierr = VecRestoreArray(vec,&array);CHKERRQ(ierr);
36047c6ae99SBarry Smith   ierr = VecResetArray(global);CHKERRQ(ierr);
36147c6ae99SBarry Smith   ierr = DMRestoreGlobalVector(mine->dm,&global);CHKERRQ(ierr);
36247c6ae99SBarry Smith   PetscFunctionReturn(0);
36347c6ae99SBarry Smith }
36447c6ae99SBarry Smith 
36547c6ae99SBarry Smith /* ----------------------------------------------------------------------------------*/
36647c6ae99SBarry Smith 
36747c6ae99SBarry Smith #include <stdarg.h>
36847c6ae99SBarry Smith 
36947c6ae99SBarry Smith #undef __FUNCT__
37047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetNumberDM"
37147c6ae99SBarry Smith /*@C
37247c6ae99SBarry Smith     DMCompositeGetNumberDM - Get's the number of DM objects in the DMComposite
37347c6ae99SBarry Smith        representation.
37447c6ae99SBarry Smith 
37547c6ae99SBarry Smith     Not Collective
37647c6ae99SBarry Smith 
37747c6ae99SBarry Smith     Input Parameter:
37847c6ae99SBarry Smith .    dm - the packer object
37947c6ae99SBarry Smith 
38047c6ae99SBarry Smith     Output Parameter:
38147c6ae99SBarry Smith .     nDM - the number of DMs
38247c6ae99SBarry Smith 
38347c6ae99SBarry Smith     Level: beginner
38447c6ae99SBarry Smith 
38547c6ae99SBarry Smith @*/
38647c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGetNumberDM(DM dm,PetscInt *nDM)
38747c6ae99SBarry Smith {
38847c6ae99SBarry Smith   DM_Composite *com = (DM_Composite*)dm->data;
38947c6ae99SBarry Smith   PetscFunctionBegin;
39047c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
39147c6ae99SBarry Smith   *nDM = com->nDM;
39247c6ae99SBarry Smith   PetscFunctionReturn(0);
39347c6ae99SBarry Smith }
39447c6ae99SBarry Smith 
39547c6ae99SBarry Smith 
39647c6ae99SBarry Smith #undef __FUNCT__
39747c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess"
39847c6ae99SBarry Smith /*@C
39947c6ae99SBarry Smith     DMCompositeGetAccess - Allows one to access the individual packed vectors in their global
40047c6ae99SBarry Smith        representation.
40147c6ae99SBarry Smith 
40247c6ae99SBarry Smith     Collective on DMComposite
40347c6ae99SBarry Smith 
40447c6ae99SBarry Smith     Input Parameter:
40547c6ae99SBarry Smith +    dm - the packer object
40647c6ae99SBarry Smith .    gvec - the global vector
40747c6ae99SBarry Smith -    ... - the individual sequential or parallel objects (arrays or vectors)
40847c6ae99SBarry Smith 
40947c6ae99SBarry Smith     Notes: Use DMCompositeRestoreAccess() to return the vectors when you no longer need them
41047c6ae99SBarry Smith 
41147c6ae99SBarry Smith     Level: advanced
41247c6ae99SBarry Smith 
41347c6ae99SBarry Smith @*/
41447c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGetAccess(DM dm,Vec gvec,...)
41547c6ae99SBarry Smith {
41647c6ae99SBarry Smith   va_list                Argp;
41747c6ae99SBarry Smith   PetscErrorCode         ierr;
41847c6ae99SBarry Smith   struct DMCompositeLink *next;
41947c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
42047c6ae99SBarry Smith 
42147c6ae99SBarry Smith   PetscFunctionBegin;
42247c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
42347c6ae99SBarry Smith   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
42447c6ae99SBarry Smith   next = com->next;
42547c6ae99SBarry Smith   if (!com->setup) {
42647c6ae99SBarry Smith     ierr = DMCompositeSetUp(dm);CHKERRQ(ierr);
42747c6ae99SBarry Smith   }
42847c6ae99SBarry Smith 
42947c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
43047c6ae99SBarry Smith   va_start(Argp,gvec);
43147c6ae99SBarry Smith   while (next) {
43247c6ae99SBarry Smith     if (next->type == DMCOMPOSITE_ARRAY) {
43347c6ae99SBarry Smith       PetscScalar **array;
43447c6ae99SBarry Smith       array = va_arg(Argp, PetscScalar**);
43547c6ae99SBarry Smith       ierr  = DMCompositeGetAccess_Array(dm,next,gvec,array);CHKERRQ(ierr);
43647c6ae99SBarry Smith     } else if (next->type == DMCOMPOSITE_DM) {
43747c6ae99SBarry Smith       Vec *vec;
43847c6ae99SBarry Smith       vec  = va_arg(Argp, Vec*);
43947c6ae99SBarry Smith       ierr = DMCompositeGetAccess_DM(dm,next,gvec,vec);CHKERRQ(ierr);
44047c6ae99SBarry Smith     } else {
44147c6ae99SBarry Smith       SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
44247c6ae99SBarry Smith     }
44347c6ae99SBarry Smith     next = next->next;
44447c6ae99SBarry Smith   }
44547c6ae99SBarry Smith   va_end(Argp);
44647c6ae99SBarry Smith   PetscFunctionReturn(0);
44747c6ae99SBarry Smith }
44847c6ae99SBarry Smith 
44947c6ae99SBarry Smith #undef __FUNCT__
45047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess"
45147c6ae99SBarry Smith /*@C
45247c6ae99SBarry Smith     DMCompositeRestoreAccess - Returns the vectors obtained with DACompositeGetAccess()
45347c6ae99SBarry Smith        representation.
45447c6ae99SBarry Smith 
45547c6ae99SBarry Smith     Collective on DMComposite
45647c6ae99SBarry Smith 
45747c6ae99SBarry Smith     Input Parameter:
45847c6ae99SBarry Smith +    dm - the packer object
45947c6ae99SBarry Smith .    gvec - the global vector
46047c6ae99SBarry Smith -    ... - the individual sequential or parallel objects (arrays or vectors)
46147c6ae99SBarry Smith 
46247c6ae99SBarry Smith     Level: advanced
46347c6ae99SBarry Smith 
464*0c010503SBarry Smith .seealso  DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(),
46547c6ae99SBarry Smith          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetGlobalIndices(), DMCompositeScatter(),
46647c6ae99SBarry Smith          DMCompositeRestoreAccess(), DACompositeGetAccess()
46747c6ae99SBarry Smith 
46847c6ae99SBarry Smith @*/
46947c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeRestoreAccess(DM dm,Vec gvec,...)
47047c6ae99SBarry Smith {
47147c6ae99SBarry Smith   va_list                Argp;
47247c6ae99SBarry Smith   PetscErrorCode         ierr;
47347c6ae99SBarry Smith   struct DMCompositeLink *next;
47447c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
47547c6ae99SBarry Smith 
47647c6ae99SBarry Smith   PetscFunctionBegin;
47747c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
47847c6ae99SBarry Smith   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
47947c6ae99SBarry Smith   next = com->next;
48047c6ae99SBarry Smith   if (!com->setup) {
48147c6ae99SBarry Smith     ierr = DMCompositeSetUp(dm);CHKERRQ(ierr);
48247c6ae99SBarry Smith   }
48347c6ae99SBarry Smith 
48447c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
48547c6ae99SBarry Smith   va_start(Argp,gvec);
48647c6ae99SBarry Smith   while (next) {
48747c6ae99SBarry Smith     if (next->type == DMCOMPOSITE_ARRAY) {
48847c6ae99SBarry Smith       PetscScalar **array;
48947c6ae99SBarry Smith       array = va_arg(Argp, PetscScalar**);
49047c6ae99SBarry Smith       ierr  = DMCompositeRestoreAccess_Array(dm,next,gvec,array);CHKERRQ(ierr);
49147c6ae99SBarry Smith     } else if (next->type == DMCOMPOSITE_DM) {
49247c6ae99SBarry Smith       Vec *vec;
49347c6ae99SBarry Smith       vec  = va_arg(Argp, Vec*);
49447c6ae99SBarry Smith       ierr = DMCompositeRestoreAccess_DM(dm,next,gvec,vec);CHKERRQ(ierr);
49547c6ae99SBarry Smith     } else {
49647c6ae99SBarry Smith       SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
49747c6ae99SBarry Smith     }
49847c6ae99SBarry Smith     next = next->next;
49947c6ae99SBarry Smith   }
50047c6ae99SBarry Smith   va_end(Argp);
50147c6ae99SBarry Smith   PetscFunctionReturn(0);
50247c6ae99SBarry Smith }
50347c6ae99SBarry Smith 
50447c6ae99SBarry Smith #undef __FUNCT__
50547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter"
50647c6ae99SBarry Smith /*@C
50747c6ae99SBarry Smith     DMCompositeScatter - Scatters from a global packed vector into its individual local vectors
50847c6ae99SBarry Smith 
50947c6ae99SBarry Smith     Collective on DMComposite
51047c6ae99SBarry Smith 
51147c6ae99SBarry Smith     Input Parameter:
51247c6ae99SBarry Smith +    dm - the packer object
51347c6ae99SBarry Smith .    gvec - the global vector
51447c6ae99SBarry Smith -    ... - the individual sequential objects (arrays or vectors)
51547c6ae99SBarry Smith 
51647c6ae99SBarry Smith     Level: advanced
51747c6ae99SBarry Smith 
518*0c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(),
51947c6ae99SBarry Smith          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetGlobalIndices(), DMCompositeGetAccess(),
52047c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries()
52147c6ae99SBarry Smith 
52247c6ae99SBarry Smith @*/
52347c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeScatter(DM dm,Vec gvec,...)
52447c6ae99SBarry Smith {
52547c6ae99SBarry Smith   va_list                Argp;
52647c6ae99SBarry Smith   PetscErrorCode         ierr;
52747c6ae99SBarry Smith   struct DMCompositeLink *next;
52847c6ae99SBarry Smith   PetscInt               cnt = 3;
52947c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
53047c6ae99SBarry Smith 
53147c6ae99SBarry Smith   PetscFunctionBegin;
53247c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
53347c6ae99SBarry Smith   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
53447c6ae99SBarry Smith   next = com->next;
53547c6ae99SBarry Smith   if (!com->setup) {
53647c6ae99SBarry Smith     ierr = DMCompositeSetUp(dm);CHKERRQ(ierr);
53747c6ae99SBarry Smith   }
53847c6ae99SBarry Smith 
53947c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
54047c6ae99SBarry Smith   va_start(Argp,gvec);
54147c6ae99SBarry Smith   while (next) {
54247c6ae99SBarry Smith     if (next->type == DMCOMPOSITE_ARRAY) {
54347c6ae99SBarry Smith       PetscScalar *array;
54447c6ae99SBarry Smith       array = va_arg(Argp, PetscScalar*);
54547c6ae99SBarry Smith       ierr = DMCompositeScatter_Array(dm,next,gvec,array);CHKERRQ(ierr);
54647c6ae99SBarry Smith     } else if (next->type == DMCOMPOSITE_DM) {
54747c6ae99SBarry Smith       Vec vec;
54847c6ae99SBarry Smith       vec = va_arg(Argp, Vec);
54947c6ae99SBarry Smith       PetscValidHeaderSpecific(vec,VEC_CLASSID,cnt);
55047c6ae99SBarry Smith       ierr = DMCompositeScatter_DM(dm,next,gvec,vec);CHKERRQ(ierr);
55147c6ae99SBarry Smith     } else {
55247c6ae99SBarry Smith       SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
55347c6ae99SBarry Smith     }
55447c6ae99SBarry Smith     cnt++;
55547c6ae99SBarry Smith     next = next->next;
55647c6ae99SBarry Smith   }
55747c6ae99SBarry Smith   va_end(Argp);
55847c6ae99SBarry Smith   PetscFunctionReturn(0);
55947c6ae99SBarry Smith }
56047c6ae99SBarry Smith 
56147c6ae99SBarry Smith #undef __FUNCT__
56247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather"
56347c6ae99SBarry Smith /*@C
56447c6ae99SBarry Smith     DMCompositeGather - Gathers into a global packed vector from its individual local vectors
56547c6ae99SBarry Smith 
56647c6ae99SBarry Smith     Collective on DMComposite
56747c6ae99SBarry Smith 
56847c6ae99SBarry Smith     Input Parameter:
56947c6ae99SBarry Smith +    dm - the packer object
57047c6ae99SBarry Smith .    gvec - the global vector
57147c6ae99SBarry Smith -    ... - the individual sequential objects (arrays or vectors)
57247c6ae99SBarry Smith 
57347c6ae99SBarry Smith     Level: advanced
57447c6ae99SBarry Smith 
575*0c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(),
57647c6ae99SBarry Smith          DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetGlobalIndices(), DMCompositeGetAccess(),
57747c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries()
57847c6ae99SBarry Smith 
57947c6ae99SBarry Smith @*/
58047c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGather(DM dm,Vec gvec,...)
58147c6ae99SBarry Smith {
58247c6ae99SBarry Smith   va_list                Argp;
58347c6ae99SBarry Smith   PetscErrorCode         ierr;
58447c6ae99SBarry Smith   struct DMCompositeLink *next;
58547c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
58647c6ae99SBarry Smith 
58747c6ae99SBarry Smith   PetscFunctionBegin;
58847c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
58947c6ae99SBarry Smith   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
59047c6ae99SBarry Smith   next = com->next;
59147c6ae99SBarry Smith   if (!com->setup) {
59247c6ae99SBarry Smith     ierr = DMCompositeSetUp(dm);CHKERRQ(ierr);
59347c6ae99SBarry Smith   }
59447c6ae99SBarry Smith 
59547c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
59647c6ae99SBarry Smith   va_start(Argp,gvec);
59747c6ae99SBarry Smith   while (next) {
59847c6ae99SBarry Smith     if (next->type == DMCOMPOSITE_ARRAY) {
59947c6ae99SBarry Smith       PetscScalar *array;
60047c6ae99SBarry Smith       array = va_arg(Argp, PetscScalar*);
60147c6ae99SBarry Smith       ierr  = DMCompositeGather_Array(dm,next,gvec,array);CHKERRQ(ierr);
60247c6ae99SBarry Smith     } else if (next->type == DMCOMPOSITE_DM) {
60347c6ae99SBarry Smith       Vec vec;
60447c6ae99SBarry Smith       vec = va_arg(Argp, Vec);
60547c6ae99SBarry Smith       PetscValidHeaderSpecific(vec,VEC_CLASSID,3);
60647c6ae99SBarry Smith       ierr = DMCompositeGather_DM(dm,next,gvec,vec);CHKERRQ(ierr);
60747c6ae99SBarry Smith     } else {
60847c6ae99SBarry Smith       SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
60947c6ae99SBarry Smith     }
61047c6ae99SBarry Smith     next = next->next;
61147c6ae99SBarry Smith   }
61247c6ae99SBarry Smith   va_end(Argp);
61347c6ae99SBarry Smith   PetscFunctionReturn(0);
61447c6ae99SBarry Smith }
61547c6ae99SBarry Smith 
61647c6ae99SBarry Smith #undef __FUNCT__
61747c6ae99SBarry Smith #define __FUNCT__ "DMCompositeAddArray"
61847c6ae99SBarry Smith /*@C
61947c6ae99SBarry Smith     DMCompositeAddArray - adds an "redundant" array to a DMComposite. The array values will
62047c6ae99SBarry Smith        be stored in part of the array on process orank.
62147c6ae99SBarry Smith 
62247c6ae99SBarry Smith     Collective on DMComposite
62347c6ae99SBarry Smith 
62447c6ae99SBarry Smith     Input Parameter:
62547c6ae99SBarry Smith +    dm - the packer object
62647c6ae99SBarry Smith .    orank - the process on which the array entries officially live, this number must be
62747c6ae99SBarry Smith              the same on all processes.
62847c6ae99SBarry Smith -    n - the length of the array
62947c6ae99SBarry Smith 
63047c6ae99SBarry Smith     Level: advanced
63147c6ae99SBarry Smith 
632*0c010503SBarry Smith .seealso DMDestroy(), DMCompositeGather(), DMCompositeAddDM(), DMCreateGlobalVector(),
63347c6ae99SBarry Smith          DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetGlobalIndices(), DMCompositeGetAccess(),
63447c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries()
63547c6ae99SBarry Smith 
63647c6ae99SBarry Smith @*/
63747c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeAddArray(DM dm,PetscMPIInt orank,PetscInt n)
63847c6ae99SBarry Smith {
63947c6ae99SBarry Smith   struct DMCompositeLink *mine,*next;
64047c6ae99SBarry Smith   PetscErrorCode         ierr;
64147c6ae99SBarry Smith   PetscMPIInt            rank;
64247c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
64347c6ae99SBarry Smith 
64447c6ae99SBarry Smith   PetscFunctionBegin;
64547c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
64647c6ae99SBarry Smith   next = com->next;
64747c6ae99SBarry Smith   if (com->setup) {
64847c6ae99SBarry Smith     SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_ARG_WRONGSTATE,"Cannot add an array once you have used the DMComposite");
64947c6ae99SBarry Smith   }
65047c6ae99SBarry Smith #if defined(PETSC_USE_DEBUG)
65147c6ae99SBarry Smith   {
65247c6ae99SBarry Smith     PetscMPIInt orankmax;
65347c6ae99SBarry Smith     ierr = MPI_Allreduce(&orank,&orankmax,1,MPI_INT,MPI_MAX,((PetscObject)dm)->comm);CHKERRQ(ierr);
65447c6ae99SBarry Smith     if (orank != orankmax) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"orank %d must be equal on all processes, another process has value %d",orank,orankmax);
65547c6ae99SBarry Smith   }
65647c6ae99SBarry Smith #endif
65747c6ae99SBarry Smith 
65847c6ae99SBarry Smith   ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr);
65947c6ae99SBarry Smith   /* create new link */
66047c6ae99SBarry Smith   ierr                = PetscNew(struct DMCompositeLink,&mine);CHKERRQ(ierr);
66147c6ae99SBarry Smith   mine->n             = n;
66247c6ae99SBarry Smith   mine->rank          = orank;
66347c6ae99SBarry Smith   mine->dm            = PETSC_NULL;
66447c6ae99SBarry Smith   mine->type          = DMCOMPOSITE_ARRAY;
66547c6ae99SBarry Smith   mine->next          = PETSC_NULL;
66647c6ae99SBarry Smith   if (rank == mine->rank) {com->n += n;com->nmine++;}
66747c6ae99SBarry Smith 
66847c6ae99SBarry Smith   /* add to end of list */
66947c6ae99SBarry Smith   if (!next) {
67047c6ae99SBarry Smith     com->next = mine;
67147c6ae99SBarry Smith   } else {
67247c6ae99SBarry Smith     while (next->next) next = next->next;
67347c6ae99SBarry Smith     next->next = mine;
67447c6ae99SBarry Smith   }
67547c6ae99SBarry Smith   com->nredundant++;
67647c6ae99SBarry Smith   PetscFunctionReturn(0);
67747c6ae99SBarry Smith }
67847c6ae99SBarry Smith 
67947c6ae99SBarry Smith #undef __FUNCT__
68047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeAddDM"
68147c6ae99SBarry Smith /*@C
68247c6ae99SBarry Smith     DMCompositeAddDM - adds a DM (includes DA) vector to a DMComposite
68347c6ae99SBarry Smith 
68447c6ae99SBarry Smith     Collective on DMComposite
68547c6ae99SBarry Smith 
68647c6ae99SBarry Smith     Input Parameter:
68747c6ae99SBarry Smith +    dm - the packer object
68847c6ae99SBarry Smith -    dm - the DM object, if the DM is a da you will need to caste it with a (DM)
68947c6ae99SBarry Smith 
69047c6ae99SBarry Smith     Level: advanced
69147c6ae99SBarry Smith 
692*0c010503SBarry Smith .seealso DMDestroy(), DMCompositeGather(), DMCompositeAddDM(), DMCreateGlobalVector(),
69347c6ae99SBarry Smith          DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetGlobalIndices(), DMCompositeGetAccess(),
69447c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries()
69547c6ae99SBarry Smith 
69647c6ae99SBarry Smith @*/
69747c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeAddDM(DM dmc,DM dm)
69847c6ae99SBarry Smith {
69947c6ae99SBarry Smith   PetscErrorCode         ierr;
70047c6ae99SBarry Smith   PetscInt               n;
70147c6ae99SBarry Smith   struct DMCompositeLink *mine,*next;
70247c6ae99SBarry Smith   Vec                    global;
70347c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dmc->data;
70447c6ae99SBarry Smith 
70547c6ae99SBarry Smith   PetscFunctionBegin;
70647c6ae99SBarry Smith   PetscValidHeaderSpecific(dmc,DM_CLASSID,1);
70747c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,2);
70847c6ae99SBarry Smith   next = com->next;
70947c6ae99SBarry Smith   if (com->setup) SETERRQ(((PetscObject)dmc)->comm,PETSC_ERR_ARG_WRONGSTATE,"Cannot add a DA once you have used the DMComposite");
71047c6ae99SBarry Smith 
71147c6ae99SBarry Smith   /* create new link */
71247c6ae99SBarry Smith   ierr = PetscNew(struct DMCompositeLink,&mine);CHKERRQ(ierr);
71347c6ae99SBarry Smith   ierr = PetscObjectReference((PetscObject)dm);CHKERRQ(ierr);
71447c6ae99SBarry Smith   ierr = DMGetGlobalVector(dm,&global);CHKERRQ(ierr);
71547c6ae99SBarry Smith   ierr = VecGetLocalSize(global,&n);CHKERRQ(ierr);
71647c6ae99SBarry Smith   ierr = DMRestoreGlobalVector(dm,&global);CHKERRQ(ierr);
71747c6ae99SBarry Smith   mine->n      = n;
71847c6ae99SBarry Smith   mine->dm     = dm;
71947c6ae99SBarry Smith   mine->type   = DMCOMPOSITE_DM;
72047c6ae99SBarry Smith   mine->next   = PETSC_NULL;
72147c6ae99SBarry Smith   com->n       += n;
72247c6ae99SBarry Smith 
72347c6ae99SBarry Smith   /* add to end of list */
72447c6ae99SBarry Smith   if (!next) {
72547c6ae99SBarry Smith     com->next = mine;
72647c6ae99SBarry Smith   } else {
72747c6ae99SBarry Smith     while (next->next) next = next->next;
72847c6ae99SBarry Smith     next->next = mine;
72947c6ae99SBarry Smith   }
73047c6ae99SBarry Smith   com->nDM++;
73147c6ae99SBarry Smith   com->nmine++;
73247c6ae99SBarry Smith   PetscFunctionReturn(0);
73347c6ae99SBarry Smith }
73447c6ae99SBarry Smith 
73547c6ae99SBarry Smith extern PetscErrorCode PETSCDM_DLLEXPORT VecView_MPI(Vec,PetscViewer);
73647c6ae99SBarry Smith EXTERN_C_BEGIN
73747c6ae99SBarry Smith #undef __FUNCT__
73847c6ae99SBarry Smith #define __FUNCT__ "VecView_DMComposite"
73947c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT VecView_DMComposite(Vec gvec,PetscViewer viewer)
74047c6ae99SBarry Smith {
74147c6ae99SBarry Smith   DM                     dm;
74247c6ae99SBarry Smith   PetscErrorCode         ierr;
74347c6ae99SBarry Smith   struct DMCompositeLink *next;
74447c6ae99SBarry Smith   PetscBool              isdraw;
74547c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
74647c6ae99SBarry Smith 
74747c6ae99SBarry Smith   PetscFunctionBegin;
74847c6ae99SBarry Smith   ierr = PetscObjectQuery((PetscObject)gvec,"DMComposite",(PetscObject*)&dm);CHKERRQ(ierr);
74947c6ae99SBarry Smith   if (!dm) SETERRQ(((PetscObject)gvec)->comm,PETSC_ERR_ARG_WRONG,"Vector not generated from a DMComposite");
75047c6ae99SBarry Smith   com = (DM_Composite*)dm->data;
75147c6ae99SBarry Smith   next = com->next;
75247c6ae99SBarry Smith 
75347c6ae99SBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr);
75447c6ae99SBarry Smith   if (!isdraw) {
75547c6ae99SBarry Smith     /* do I really want to call this? */
75647c6ae99SBarry Smith     ierr = VecView_MPI(gvec,viewer);CHKERRQ(ierr);
75747c6ae99SBarry Smith   } else {
75847c6ae99SBarry Smith     PetscInt cnt = 0;
75947c6ae99SBarry Smith 
76047c6ae99SBarry Smith     /* loop over packed objects, handling one at at time */
76147c6ae99SBarry Smith     while (next) {
76247c6ae99SBarry Smith       if (next->type == DMCOMPOSITE_ARRAY) {
76347c6ae99SBarry Smith 	PetscScalar *array;
76447c6ae99SBarry Smith 	ierr  = DMCompositeGetAccess_Array(dm,next,gvec,&array);CHKERRQ(ierr);
76547c6ae99SBarry Smith 
76647c6ae99SBarry Smith 	/*skip it for now */
76747c6ae99SBarry Smith       } else if (next->type == DMCOMPOSITE_DM) {
76847c6ae99SBarry Smith 	Vec      vec;
76947c6ae99SBarry Smith         PetscInt bs;
77047c6ae99SBarry Smith 
77147c6ae99SBarry Smith 	ierr = DMCompositeGetAccess_DM(dm,next,gvec,&vec);CHKERRQ(ierr);
77247c6ae99SBarry Smith 	ierr = VecView(vec,viewer);CHKERRQ(ierr);
77347c6ae99SBarry Smith         ierr = VecGetBlockSize(vec,&bs);CHKERRQ(ierr);
77447c6ae99SBarry Smith 	ierr = DMCompositeRestoreAccess_DM(dm,next,gvec,&vec);CHKERRQ(ierr);
77547c6ae99SBarry Smith         ierr = PetscViewerDrawBaseAdd(viewer,bs);CHKERRQ(ierr);
77647c6ae99SBarry Smith         cnt += bs;
77747c6ae99SBarry Smith       } else {
77847c6ae99SBarry Smith 	SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
77947c6ae99SBarry Smith       }
78047c6ae99SBarry Smith       next = next->next;
78147c6ae99SBarry Smith     }
78247c6ae99SBarry Smith     ierr = PetscViewerDrawBaseAdd(viewer,-cnt);CHKERRQ(ierr);
78347c6ae99SBarry Smith   }
78447c6ae99SBarry Smith   PetscFunctionReturn(0);
78547c6ae99SBarry Smith }
78647c6ae99SBarry Smith EXTERN_C_END
78747c6ae99SBarry Smith 
78847c6ae99SBarry Smith 
78947c6ae99SBarry Smith #undef __FUNCT__
790*0c010503SBarry Smith #define __FUNCT__ "DMCreateGlobalVector_Composite"
791*0c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCreateGlobalVector_Composite(DM dm,Vec *gvec)
79247c6ae99SBarry Smith {
79347c6ae99SBarry Smith   PetscErrorCode         ierr;
79447c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
79547c6ae99SBarry Smith 
79647c6ae99SBarry Smith   PetscFunctionBegin;
79747c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
79847c6ae99SBarry Smith   if (!com->setup) {
79947c6ae99SBarry Smith     ierr = DMCompositeSetUp(dm);CHKERRQ(ierr);
80047c6ae99SBarry Smith   }
80147c6ae99SBarry Smith   ierr = VecCreateMPI(((PetscObject)dm)->comm,com->n,com->N,gvec);CHKERRQ(ierr);
80247c6ae99SBarry Smith   ierr = PetscObjectCompose((PetscObject)*gvec,"DMComposite",(PetscObject)dm);CHKERRQ(ierr);
80347c6ae99SBarry Smith   ierr = VecSetOperation(*gvec,VECOP_VIEW,(void(*)(void))VecView_DMComposite);CHKERRQ(ierr);
80447c6ae99SBarry Smith   PetscFunctionReturn(0);
80547c6ae99SBarry Smith }
80647c6ae99SBarry Smith 
80747c6ae99SBarry Smith #undef __FUNCT__
808*0c010503SBarry Smith #define __FUNCT__ "DMCreateLocalVector_Composite"
809*0c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCreateLocalVector_Composite(DM dm,Vec *lvec)
81047c6ae99SBarry Smith {
81147c6ae99SBarry Smith   PetscErrorCode         ierr;
81247c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
81347c6ae99SBarry Smith 
81447c6ae99SBarry Smith   PetscFunctionBegin;
81547c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
81647c6ae99SBarry Smith   if (!com->setup) {
81747c6ae99SBarry Smith     ierr = DMCompositeSetUp(dm);CHKERRQ(ierr);
81847c6ae99SBarry Smith   }
81947c6ae99SBarry Smith   ierr = VecCreateSeq(((PetscObject)dm)->comm,com->nghost,lvec);CHKERRQ(ierr);
82047c6ae99SBarry Smith   ierr = PetscObjectCompose((PetscObject)*lvec,"DMComposite",(PetscObject)dm);CHKERRQ(ierr);
82147c6ae99SBarry Smith   PetscFunctionReturn(0);
82247c6ae99SBarry Smith }
82347c6ae99SBarry Smith 
82447c6ae99SBarry Smith #undef __FUNCT__
82547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalISs"
82647c6ae99SBarry Smith /*@C
82747c6ae99SBarry Smith     DMCompositeGetLocalISs - gets an IS for each DM/array in the DMComposite, include ghost points
82847c6ae99SBarry Smith 
82947c6ae99SBarry Smith     Collective on DMComposite
83047c6ae99SBarry Smith 
83147c6ae99SBarry Smith     Input Parameter:
83247c6ae99SBarry Smith .    dm - the packer object
83347c6ae99SBarry Smith 
83447c6ae99SBarry Smith     Output Parameters:
83547c6ae99SBarry Smith .    is - the individual indices for each packed vector/array. Note that this includes
83647c6ae99SBarry Smith            all the ghost points that individual ghosted DA's may have. Also each process has an
83747c6ae99SBarry Smith            is for EACH redundant array (not just the local redundant arrays).
83847c6ae99SBarry Smith 
83947c6ae99SBarry Smith     Level: advanced
84047c6ae99SBarry Smith 
84147c6ae99SBarry Smith     Notes:
84247c6ae99SBarry Smith        The is entries should be destroyed with ISDestroy(), the is array should be freed with PetscFree()
84347c6ae99SBarry Smith 
84447c6ae99SBarry Smith        Use DMCompositeGetGlobalISs() for non-ghosted ISs.
84547c6ae99SBarry Smith 
846*0c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(),
84747c6ae99SBarry Smith          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(),
84847c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries()
84947c6ae99SBarry Smith 
85047c6ae99SBarry Smith @*/
85147c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGetGlobalIndices(DM dm,IS *is[])
85247c6ae99SBarry Smith {
85347c6ae99SBarry Smith   PetscErrorCode         ierr;
85447c6ae99SBarry Smith   PetscInt               i,*idx,n,cnt;
85547c6ae99SBarry Smith   struct DMCompositeLink *next;
85647c6ae99SBarry Smith   Vec                    global,dglobal;
85747c6ae99SBarry Smith   PF                     pf;
85847c6ae99SBarry Smith   PetscScalar            *array;
85947c6ae99SBarry Smith   PetscMPIInt            rank;
86047c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
86147c6ae99SBarry Smith 
86247c6ae99SBarry Smith   PetscFunctionBegin;
86347c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
86447c6ae99SBarry Smith   ierr = PetscMalloc(com->nmine*sizeof(IS),is);CHKERRQ(ierr);
86547c6ae99SBarry Smith   next = com->next;
866*0c010503SBarry Smith   ierr = DMCreateGlobalVector(dm,&global);CHKERRQ(ierr);
86747c6ae99SBarry Smith   ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr);
86847c6ae99SBarry Smith 
86947c6ae99SBarry Smith   /* put 0 to N-1 into the global vector */
87047c6ae99SBarry Smith   ierr = PFCreate(PETSC_COMM_WORLD,1,1,&pf);CHKERRQ(ierr);
87147c6ae99SBarry Smith   ierr = PFSetType(pf,PFIDENTITY,PETSC_NULL);CHKERRQ(ierr);
87247c6ae99SBarry Smith   ierr = PFApplyVec(pf,PETSC_NULL,global);CHKERRQ(ierr);
87347c6ae99SBarry Smith   ierr = PFDestroy(pf);CHKERRQ(ierr);
87447c6ae99SBarry Smith 
87547c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
87647c6ae99SBarry Smith   cnt = 0;
87747c6ae99SBarry Smith   while (next) {
87847c6ae99SBarry Smith 
87947c6ae99SBarry Smith     if (next->type == DMCOMPOSITE_ARRAY) {
88047c6ae99SBarry Smith 
88147c6ae99SBarry Smith       ierr = PetscMalloc(next->n*sizeof(PetscInt),&idx);CHKERRQ(ierr);
88247c6ae99SBarry Smith       if (rank == next->rank) {
88347c6ae99SBarry Smith         ierr   = VecGetArray(global,&array);CHKERRQ(ierr);
88447c6ae99SBarry Smith         array += next->rstart;
88547c6ae99SBarry Smith         for (i=0; i<next->n; i++) idx[i] = (PetscInt)PetscRealPart(array[i]);
88647c6ae99SBarry Smith         array -= next->rstart;
88747c6ae99SBarry Smith         ierr   = VecRestoreArray(global,&array);CHKERRQ(ierr);
88847c6ae99SBarry Smith       }
88947c6ae99SBarry Smith       ierr = MPI_Bcast(idx,next->n,MPIU_INT,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr);
89047c6ae99SBarry Smith       ierr = ISCreateGeneral(((PetscObject)dm)->comm,next->n,idx,PETSC_OWN_POINTER,&(*is)[cnt]);CHKERRQ(ierr);
89147c6ae99SBarry Smith     } else if (next->type == DMCOMPOSITE_DM) {
89247c6ae99SBarry Smith       Vec local;
89347c6ae99SBarry Smith 
89447c6ae99SBarry Smith       ierr   = DMCreateLocalVector(next->dm,&local);CHKERRQ(ierr);
89547c6ae99SBarry Smith       ierr   = VecGetArray(global,&array);CHKERRQ(ierr);
89647c6ae99SBarry Smith       array += next->rstart;
89747c6ae99SBarry Smith       ierr   = DMGetGlobalVector(next->dm,&dglobal);CHKERRQ(ierr);
89847c6ae99SBarry Smith       ierr   = VecPlaceArray(dglobal,array);CHKERRQ(ierr);
89947c6ae99SBarry Smith       ierr   = DMGlobalToLocalBegin(next->dm,dglobal,INSERT_VALUES,local);CHKERRQ(ierr);
90047c6ae99SBarry Smith       ierr   = DMGlobalToLocalEnd(next->dm,dglobal,INSERT_VALUES,local);CHKERRQ(ierr);
90147c6ae99SBarry Smith       array -= next->rstart;
90247c6ae99SBarry Smith       ierr   = VecRestoreArray(global,&array);CHKERRQ(ierr);
90347c6ae99SBarry Smith       ierr   = VecResetArray(dglobal);CHKERRQ(ierr);
90447c6ae99SBarry Smith       ierr   = DMRestoreGlobalVector(next->dm,&dglobal);CHKERRQ(ierr);
90547c6ae99SBarry Smith 
90647c6ae99SBarry Smith       ierr   = VecGetArray(local,&array);CHKERRQ(ierr);
90747c6ae99SBarry Smith       ierr   = VecGetSize(local,&n);CHKERRQ(ierr);
90847c6ae99SBarry Smith       ierr   = PetscMalloc(n*sizeof(PetscInt),&idx);CHKERRQ(ierr);
90947c6ae99SBarry Smith       for (i=0; i<n; i++) idx[i] = (PetscInt)PetscRealPart(array[i]);
91047c6ae99SBarry Smith       ierr    = VecRestoreArray(local,&array);CHKERRQ(ierr);
91147c6ae99SBarry Smith       ierr    = VecDestroy(local);CHKERRQ(ierr);
91247c6ae99SBarry Smith       ierr    = ISCreateGeneral(((PetscObject)dm)->comm,next->n,idx,PETSC_OWN_POINTER,&(*is)[cnt]);CHKERRQ(ierr);
91347c6ae99SBarry Smith 
91447c6ae99SBarry Smith     } else SETERRQ(((PetscObject)global)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
91547c6ae99SBarry Smith     next = next->next;
91647c6ae99SBarry Smith     cnt++;
91747c6ae99SBarry Smith   }
91847c6ae99SBarry Smith   ierr = VecDestroy(global);CHKERRQ(ierr);
91947c6ae99SBarry Smith   PetscFunctionReturn(0);
92047c6ae99SBarry Smith }
92147c6ae99SBarry Smith 
92247c6ae99SBarry Smith #undef __FUNCT__
92347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetGlobalISs"
92447c6ae99SBarry Smith /*@C
92547c6ae99SBarry Smith     DMCompositeGetGlobalISs - Gets the index sets for each composed object
92647c6ae99SBarry Smith 
92747c6ae99SBarry Smith     Collective on DMComposite
92847c6ae99SBarry Smith 
92947c6ae99SBarry Smith     Input Parameter:
93047c6ae99SBarry Smith .    dm - the packer object
93147c6ae99SBarry Smith 
93247c6ae99SBarry Smith     Output Parameters:
93347c6ae99SBarry Smith .    is - the array of index sets
93447c6ae99SBarry Smith 
93547c6ae99SBarry Smith     Level: advanced
93647c6ae99SBarry Smith 
93747c6ae99SBarry Smith     Notes:
93847c6ae99SBarry Smith        The is entries should be destroyed with ISDestroy(), the is array should be freed with PetscFree()
93947c6ae99SBarry Smith 
94047c6ae99SBarry Smith        The number of IS on each process will/may be different when redundant arrays are used
94147c6ae99SBarry Smith 
94247c6ae99SBarry Smith        These could be used to extract a subset of vector entries for a "multi-physics" preconditioner
94347c6ae99SBarry Smith 
94447c6ae99SBarry Smith        Use DMCompositeGetLocalISs() for index sets that include ghost points
94547c6ae99SBarry Smith 
946*0c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(),
94747c6ae99SBarry Smith          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(),
94847c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries()
94947c6ae99SBarry Smith 
95047c6ae99SBarry Smith @*/
95147c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGetGlobalISs(DM dm,IS *is[])
95247c6ae99SBarry Smith {
95347c6ae99SBarry Smith   PetscErrorCode         ierr;
95447c6ae99SBarry Smith   PetscInt               cnt = 0,*idx,i;
95547c6ae99SBarry Smith   struct DMCompositeLink *next;
95647c6ae99SBarry Smith   PetscMPIInt            rank;
95747c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
95847c6ae99SBarry Smith 
95947c6ae99SBarry Smith   PetscFunctionBegin;
96047c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
96147c6ae99SBarry Smith   ierr = PetscMalloc(com->nmine*sizeof(IS),is);CHKERRQ(ierr);
96247c6ae99SBarry Smith   next = com->next;
96347c6ae99SBarry Smith   ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr);
96447c6ae99SBarry Smith 
96547c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
96647c6ae99SBarry Smith   while (next) {
96747c6ae99SBarry Smith 
96847c6ae99SBarry Smith     if (next->type == DMCOMPOSITE_ARRAY) {
96947c6ae99SBarry Smith 
97047c6ae99SBarry Smith       if (rank == next->rank) {
97147c6ae99SBarry Smith         ierr = PetscMalloc(next->n*sizeof(PetscInt),&idx);CHKERRQ(ierr);
97247c6ae99SBarry Smith         for (i=0; i<next->n; i++) idx[i] = next->grstart + i;
97347c6ae99SBarry Smith         ierr = ISCreateGeneral(((PetscObject)dm)->comm,next->n,idx,PETSC_OWN_POINTER,&(*is)[cnt]);CHKERRQ(ierr);
97447c6ae99SBarry Smith         cnt++;
97547c6ae99SBarry Smith       }
97647c6ae99SBarry Smith 
97747c6ae99SBarry Smith     } else if (next->type == DMCOMPOSITE_DM) {
97847c6ae99SBarry Smith       ierr = PetscMalloc(next->n*sizeof(PetscInt),&idx);CHKERRQ(ierr);
97947c6ae99SBarry Smith       for (i=0; i<next->n; i++) idx[i] = next->grstart + i;
98047c6ae99SBarry Smith       ierr = ISCreateGeneral(((PetscObject)dm)->comm,next->n,idx,PETSC_OWN_POINTER,&(*is)[cnt]);CHKERRQ(ierr);
98147c6ae99SBarry Smith       cnt++;
98247c6ae99SBarry Smith     } else {
98347c6ae99SBarry Smith       SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
98447c6ae99SBarry Smith     }
98547c6ae99SBarry Smith     next = next->next;
98647c6ae99SBarry Smith   }
98747c6ae99SBarry Smith   PetscFunctionReturn(0);
98847c6ae99SBarry Smith }
98947c6ae99SBarry Smith 
99047c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/
99147c6ae99SBarry Smith #undef __FUNCT__
99247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors_Array"
99347c6ae99SBarry Smith PetscErrorCode DMCompositeGetLocalVectors_Array(DM dm,struct DMCompositeLink *mine,PetscScalar **array)
99447c6ae99SBarry Smith {
99547c6ae99SBarry Smith   PetscErrorCode ierr;
99647c6ae99SBarry Smith   PetscFunctionBegin;
99747c6ae99SBarry Smith   if (array) {
99847c6ae99SBarry Smith     ierr = PetscMalloc(mine->n*sizeof(PetscScalar),array);CHKERRQ(ierr);
99947c6ae99SBarry Smith   }
100047c6ae99SBarry Smith   PetscFunctionReturn(0);
100147c6ae99SBarry Smith }
100247c6ae99SBarry Smith 
100347c6ae99SBarry Smith #undef __FUNCT__
100447c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors_DM"
100547c6ae99SBarry Smith PetscErrorCode DMCompositeGetLocalVectors_DM(DM dm,struct DMCompositeLink *mine,Vec *local)
100647c6ae99SBarry Smith {
100747c6ae99SBarry Smith   PetscErrorCode ierr;
100847c6ae99SBarry Smith   PetscFunctionBegin;
100947c6ae99SBarry Smith   if (local) {
101047c6ae99SBarry Smith     ierr = DMGetLocalVector(mine->dm,local);CHKERRQ(ierr);
101147c6ae99SBarry Smith   }
101247c6ae99SBarry Smith   PetscFunctionReturn(0);
101347c6ae99SBarry Smith }
101447c6ae99SBarry Smith 
101547c6ae99SBarry Smith #undef __FUNCT__
101647c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors_Array"
101747c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreLocalVectors_Array(DM dm,struct DMCompositeLink *mine,PetscScalar **array)
101847c6ae99SBarry Smith {
101947c6ae99SBarry Smith   PetscErrorCode ierr;
102047c6ae99SBarry Smith   PetscFunctionBegin;
102147c6ae99SBarry Smith   if (array) {
102247c6ae99SBarry Smith     ierr = PetscFree(*array);CHKERRQ(ierr);
102347c6ae99SBarry Smith   }
102447c6ae99SBarry Smith   PetscFunctionReturn(0);
102547c6ae99SBarry Smith }
102647c6ae99SBarry Smith 
102747c6ae99SBarry Smith #undef __FUNCT__
102847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors_DM"
102947c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreLocalVectors_DM(DM dm,struct DMCompositeLink *mine,Vec *local)
103047c6ae99SBarry Smith {
103147c6ae99SBarry Smith   PetscErrorCode ierr;
103247c6ae99SBarry Smith   PetscFunctionBegin;
103347c6ae99SBarry Smith   if (local) {
103447c6ae99SBarry Smith     ierr = DMRestoreLocalVector(mine->dm,local);CHKERRQ(ierr);
103547c6ae99SBarry Smith   }
103647c6ae99SBarry Smith   PetscFunctionReturn(0);
103747c6ae99SBarry Smith }
103847c6ae99SBarry Smith 
103947c6ae99SBarry Smith #undef __FUNCT__
104047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors"
104147c6ae99SBarry Smith /*@C
104247c6ae99SBarry Smith     DMCompositeGetLocalVectors - Gets local vectors and arrays for each part of a DMComposite.
104347c6ae99SBarry Smith        Use DMCompositeRestoreLocalVectors() to return them.
104447c6ae99SBarry Smith 
104547c6ae99SBarry Smith     Not Collective
104647c6ae99SBarry Smith 
104747c6ae99SBarry Smith     Input Parameter:
104847c6ae99SBarry Smith .    dm - the packer object
104947c6ae99SBarry Smith 
105047c6ae99SBarry Smith     Output Parameter:
105147c6ae99SBarry Smith .    ... - the individual sequential objects (arrays or vectors)
105247c6ae99SBarry Smith 
105347c6ae99SBarry Smith     Level: advanced
105447c6ae99SBarry Smith 
1055*0c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(),
105647c6ae99SBarry Smith          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetGlobalIndices(), DMCompositeGetAccess(),
105747c6ae99SBarry Smith          DMCompositeRestoreLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries()
105847c6ae99SBarry Smith 
105947c6ae99SBarry Smith @*/
106047c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGetLocalVectors(DM dm,...)
106147c6ae99SBarry Smith {
106247c6ae99SBarry Smith   va_list                Argp;
106347c6ae99SBarry Smith   PetscErrorCode         ierr;
106447c6ae99SBarry Smith   struct DMCompositeLink *next;
106547c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
106647c6ae99SBarry Smith 
106747c6ae99SBarry Smith   PetscFunctionBegin;
106847c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
106947c6ae99SBarry Smith   next = com->next;
107047c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
107147c6ae99SBarry Smith   va_start(Argp,dm);
107247c6ae99SBarry Smith   while (next) {
107347c6ae99SBarry Smith     if (next->type == DMCOMPOSITE_ARRAY) {
107447c6ae99SBarry Smith       PetscScalar **array;
107547c6ae99SBarry Smith       array = va_arg(Argp, PetscScalar**);
107647c6ae99SBarry Smith       ierr = DMCompositeGetLocalVectors_Array(dm,next,array);CHKERRQ(ierr);
107747c6ae99SBarry Smith     } else if (next->type == DMCOMPOSITE_DM) {
107847c6ae99SBarry Smith       Vec *vec;
107947c6ae99SBarry Smith       vec = va_arg(Argp, Vec*);
108047c6ae99SBarry Smith       ierr = DMCompositeGetLocalVectors_DM(dm,next,vec);CHKERRQ(ierr);
108147c6ae99SBarry Smith     } else {
108247c6ae99SBarry Smith       SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
108347c6ae99SBarry Smith     }
108447c6ae99SBarry Smith     next = next->next;
108547c6ae99SBarry Smith   }
108647c6ae99SBarry Smith   va_end(Argp);
108747c6ae99SBarry Smith   PetscFunctionReturn(0);
108847c6ae99SBarry Smith }
108947c6ae99SBarry Smith 
109047c6ae99SBarry Smith #undef __FUNCT__
109147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors"
109247c6ae99SBarry Smith /*@C
109347c6ae99SBarry Smith     DMCompositeRestoreLocalVectors - Restores local vectors and arrays for each part of a DMComposite.
109447c6ae99SBarry Smith 
109547c6ae99SBarry Smith     Not Collective
109647c6ae99SBarry Smith 
109747c6ae99SBarry Smith     Input Parameter:
109847c6ae99SBarry Smith .    dm - the packer object
109947c6ae99SBarry Smith 
110047c6ae99SBarry Smith     Output Parameter:
110147c6ae99SBarry Smith .    ... - the individual sequential objects (arrays or vectors)
110247c6ae99SBarry Smith 
110347c6ae99SBarry Smith     Level: advanced
110447c6ae99SBarry Smith 
1105*0c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(),
110647c6ae99SBarry Smith          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetGlobalIndices(), DMCompositeGetAccess(),
110747c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries()
110847c6ae99SBarry Smith 
110947c6ae99SBarry Smith @*/
111047c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeRestoreLocalVectors(DM dm,...)
111147c6ae99SBarry Smith {
111247c6ae99SBarry Smith   va_list                Argp;
111347c6ae99SBarry Smith   PetscErrorCode         ierr;
111447c6ae99SBarry Smith   struct DMCompositeLink *next;
111547c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
111647c6ae99SBarry Smith 
111747c6ae99SBarry Smith   PetscFunctionBegin;
111847c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
111947c6ae99SBarry Smith   next = com->next;
112047c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
112147c6ae99SBarry Smith   va_start(Argp,dm);
112247c6ae99SBarry Smith   while (next) {
112347c6ae99SBarry Smith     if (next->type == DMCOMPOSITE_ARRAY) {
112447c6ae99SBarry Smith       PetscScalar **array;
112547c6ae99SBarry Smith       array = va_arg(Argp, PetscScalar**);
112647c6ae99SBarry Smith       ierr = DMCompositeRestoreLocalVectors_Array(dm,next,array);CHKERRQ(ierr);
112747c6ae99SBarry Smith     } else if (next->type == DMCOMPOSITE_DM) {
112847c6ae99SBarry Smith       Vec *vec;
112947c6ae99SBarry Smith       vec = va_arg(Argp, Vec*);
113047c6ae99SBarry Smith       ierr = DMCompositeRestoreLocalVectors_DM(dm,next,vec);CHKERRQ(ierr);
113147c6ae99SBarry Smith     } else {
113247c6ae99SBarry Smith       SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
113347c6ae99SBarry Smith     }
113447c6ae99SBarry Smith     next = next->next;
113547c6ae99SBarry Smith   }
113647c6ae99SBarry Smith   va_end(Argp);
113747c6ae99SBarry Smith   PetscFunctionReturn(0);
113847c6ae99SBarry Smith }
113947c6ae99SBarry Smith 
114047c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/
114147c6ae99SBarry Smith #undef __FUNCT__
114247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries_Array"
114347c6ae99SBarry Smith PetscErrorCode DMCompositeGetEntries_Array(DM dm,struct DMCompositeLink *mine,PetscInt *n)
114447c6ae99SBarry Smith {
114547c6ae99SBarry Smith   PetscFunctionBegin;
114647c6ae99SBarry Smith   if (n) *n = mine->n;
114747c6ae99SBarry Smith   PetscFunctionReturn(0);
114847c6ae99SBarry Smith }
114947c6ae99SBarry Smith 
115047c6ae99SBarry Smith #undef __FUNCT__
115147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries_DM"
115247c6ae99SBarry Smith PetscErrorCode DMCompositeGetEntries_DM(DM dmi,struct DMCompositeLink *mine,DM *dm)
115347c6ae99SBarry Smith {
115447c6ae99SBarry Smith   PetscFunctionBegin;
115547c6ae99SBarry Smith   if (dm) *dm = mine->dm;
115647c6ae99SBarry Smith   PetscFunctionReturn(0);
115747c6ae99SBarry Smith }
115847c6ae99SBarry Smith 
115947c6ae99SBarry Smith #undef __FUNCT__
116047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries"
116147c6ae99SBarry Smith /*@C
116247c6ae99SBarry Smith     DMCompositeGetEntries - Gets the DA, redundant size, etc for each entry in a DMComposite.
116347c6ae99SBarry Smith 
116447c6ae99SBarry Smith     Not Collective
116547c6ae99SBarry Smith 
116647c6ae99SBarry Smith     Input Parameter:
116747c6ae99SBarry Smith .    dm - the packer object
116847c6ae99SBarry Smith 
116947c6ae99SBarry Smith     Output Parameter:
117047c6ae99SBarry Smith .    ... - the individual entries, DAs or integer sizes)
117147c6ae99SBarry Smith 
117247c6ae99SBarry Smith     Level: advanced
117347c6ae99SBarry Smith 
1174*0c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(),
117547c6ae99SBarry Smith          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetGlobalIndices(), DMCompositeGetAccess(),
117647c6ae99SBarry Smith          DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(),  DMCompositeScatter(),
117747c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors()
117847c6ae99SBarry Smith 
117947c6ae99SBarry Smith @*/
118047c6ae99SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeGetEntries(DM dm,...)
118147c6ae99SBarry Smith {
118247c6ae99SBarry Smith   va_list                Argp;
118347c6ae99SBarry Smith   PetscErrorCode         ierr;
118447c6ae99SBarry Smith   struct DMCompositeLink *next;
118547c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
118647c6ae99SBarry Smith 
118747c6ae99SBarry Smith   PetscFunctionBegin;
118847c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
118947c6ae99SBarry Smith   next = com->next;
119047c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
119147c6ae99SBarry Smith   va_start(Argp,dm);
119247c6ae99SBarry Smith   while (next) {
119347c6ae99SBarry Smith     if (next->type == DMCOMPOSITE_ARRAY) {
119447c6ae99SBarry Smith       PetscInt *n;
119547c6ae99SBarry Smith       n = va_arg(Argp, PetscInt*);
119647c6ae99SBarry Smith       ierr = DMCompositeGetEntries_Array(dm,next,n);CHKERRQ(ierr);
119747c6ae99SBarry Smith     } else if (next->type == DMCOMPOSITE_DM) {
119847c6ae99SBarry Smith       DM *dmn;
119947c6ae99SBarry Smith       dmn = va_arg(Argp, DM*);
120047c6ae99SBarry Smith       ierr = DMCompositeGetEntries_DM(dm,next,dmn);CHKERRQ(ierr);
120147c6ae99SBarry Smith     } else {
120247c6ae99SBarry Smith       SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
120347c6ae99SBarry Smith     }
120447c6ae99SBarry Smith     next = next->next;
120547c6ae99SBarry Smith   }
120647c6ae99SBarry Smith   va_end(Argp);
120747c6ae99SBarry Smith   PetscFunctionReturn(0);
120847c6ae99SBarry Smith }
120947c6ae99SBarry Smith 
121047c6ae99SBarry Smith #undef __FUNCT__
1211*0c010503SBarry Smith #define __FUNCT__ "DMRefine_Composite"
1212*0c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMRefine_Composite(DM dmi,MPI_Comm comm,DM *fine)
121347c6ae99SBarry Smith {
121447c6ae99SBarry Smith   PetscErrorCode         ierr;
121547c6ae99SBarry Smith   struct DMCompositeLink *next;
121647c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dmi->data;
121747c6ae99SBarry Smith   DM                     dm;
121847c6ae99SBarry Smith 
121947c6ae99SBarry Smith   PetscFunctionBegin;
122047c6ae99SBarry Smith   PetscValidHeaderSpecific(dmi,DM_CLASSID,1);
122147c6ae99SBarry Smith   next = com->next;
122247c6ae99SBarry Smith   ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr);
122347c6ae99SBarry Smith 
122447c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
122547c6ae99SBarry Smith   while (next) {
122647c6ae99SBarry Smith     if (next->type == DMCOMPOSITE_ARRAY) {
122747c6ae99SBarry Smith       ierr = DMCompositeAddArray(*fine,next->rank,next->n);CHKERRQ(ierr);
122847c6ae99SBarry Smith     } else if (next->type == DMCOMPOSITE_DM) {
122947c6ae99SBarry Smith       ierr = DMRefine(next->dm,comm,&dm);CHKERRQ(ierr);
123047c6ae99SBarry Smith       ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr);
123147c6ae99SBarry Smith       ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr);
123247c6ae99SBarry Smith     } else {
123347c6ae99SBarry Smith       SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
123447c6ae99SBarry Smith     }
123547c6ae99SBarry Smith     next = next->next;
123647c6ae99SBarry Smith   }
123747c6ae99SBarry Smith   PetscFunctionReturn(0);
123847c6ae99SBarry Smith }
123947c6ae99SBarry Smith 
124047c6ae99SBarry Smith #include "petscmat.h"
124147c6ae99SBarry Smith 
124247c6ae99SBarry Smith struct MatPackLink {
124347c6ae99SBarry Smith   Mat                A;
124447c6ae99SBarry Smith   struct MatPackLink *next;
124547c6ae99SBarry Smith };
124647c6ae99SBarry Smith 
124747c6ae99SBarry Smith struct MatPack {
124847c6ae99SBarry Smith   DM                 right,left;
124947c6ae99SBarry Smith   struct MatPackLink *next;
125047c6ae99SBarry Smith };
125147c6ae99SBarry Smith 
125247c6ae99SBarry Smith #undef __FUNCT__
125347c6ae99SBarry Smith #define __FUNCT__ "MatMultBoth_Shell_Pack"
125447c6ae99SBarry Smith PetscErrorCode MatMultBoth_Shell_Pack(Mat A,Vec x,Vec y,PetscBool  add)
125547c6ae99SBarry Smith {
125647c6ae99SBarry Smith   struct MatPack         *mpack;
125747c6ae99SBarry Smith   struct DMCompositeLink *xnext,*ynext;
125847c6ae99SBarry Smith   struct MatPackLink     *anext;
125947c6ae99SBarry Smith   PetscScalar            *xarray,*yarray;
126047c6ae99SBarry Smith   PetscErrorCode         ierr;
126147c6ae99SBarry Smith   PetscInt               i;
126247c6ae99SBarry Smith   Vec                    xglobal,yglobal;
126347c6ae99SBarry Smith   PetscMPIInt            rank;
126447c6ae99SBarry Smith   DM_Composite           *comright;
126547c6ae99SBarry Smith   DM_Composite           *comleft;
126647c6ae99SBarry Smith 
126747c6ae99SBarry Smith   PetscFunctionBegin;
126847c6ae99SBarry Smith   ierr = MatShellGetContext(A,(void**)&mpack);CHKERRQ(ierr);
126947c6ae99SBarry Smith   ierr = MPI_Comm_rank(((PetscObject)mpack->right)->comm,&rank);CHKERRQ(ierr);
127047c6ae99SBarry Smith   comright = (DM_Composite*)mpack->right->data;
127147c6ae99SBarry Smith   comleft = (DM_Composite*)mpack->left->data;
127247c6ae99SBarry Smith   xnext = comright->next;
127347c6ae99SBarry Smith   ynext = comleft->next;
127447c6ae99SBarry Smith   anext = mpack->next;
127547c6ae99SBarry Smith 
127647c6ae99SBarry Smith   while (xnext) {
127747c6ae99SBarry Smith     if (xnext->type == DMCOMPOSITE_ARRAY) {
127847c6ae99SBarry Smith       if (rank == xnext->rank) {
127947c6ae99SBarry Smith         ierr    = VecGetArray(x,&xarray);CHKERRQ(ierr);
128047c6ae99SBarry Smith         ierr    = VecGetArray(y,&yarray);CHKERRQ(ierr);
128147c6ae99SBarry Smith         if (add) {
128247c6ae99SBarry Smith           for (i=0; i<xnext->n; i++) {
128347c6ae99SBarry Smith             yarray[ynext->rstart+i] += xarray[xnext->rstart+i];
128447c6ae99SBarry Smith           }
128547c6ae99SBarry Smith         } else {
128647c6ae99SBarry Smith           ierr    = PetscMemcpy(yarray+ynext->rstart,xarray+xnext->rstart,xnext->n*sizeof(PetscScalar));CHKERRQ(ierr);
128747c6ae99SBarry Smith         }
128847c6ae99SBarry Smith         ierr    = VecRestoreArray(x,&xarray);CHKERRQ(ierr);
128947c6ae99SBarry Smith         ierr    = VecRestoreArray(y,&yarray);CHKERRQ(ierr);
129047c6ae99SBarry Smith       }
129147c6ae99SBarry Smith     } else if (xnext->type == DMCOMPOSITE_DM) {
129247c6ae99SBarry Smith       ierr  = VecGetArray(x,&xarray);CHKERRQ(ierr);
129347c6ae99SBarry Smith       ierr  = VecGetArray(y,&yarray);CHKERRQ(ierr);
129447c6ae99SBarry Smith       ierr  = DMGetGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr);
129547c6ae99SBarry Smith       ierr  = DMGetGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr);
129647c6ae99SBarry Smith       ierr  = VecPlaceArray(xglobal,xarray+xnext->rstart);CHKERRQ(ierr);
129747c6ae99SBarry Smith       ierr  = VecPlaceArray(yglobal,yarray+ynext->rstart);CHKERRQ(ierr);
129847c6ae99SBarry Smith       if (add) {
129947c6ae99SBarry Smith         ierr  = MatMultAdd(anext->A,xglobal,yglobal,yglobal);CHKERRQ(ierr);
130047c6ae99SBarry Smith       } else {
130147c6ae99SBarry Smith         ierr  = MatMult(anext->A,xglobal,yglobal);CHKERRQ(ierr);
130247c6ae99SBarry Smith       }
130347c6ae99SBarry Smith       ierr  = VecRestoreArray(x,&xarray);CHKERRQ(ierr);
130447c6ae99SBarry Smith       ierr  = VecRestoreArray(y,&yarray);CHKERRQ(ierr);
130547c6ae99SBarry Smith       ierr  = VecResetArray(xglobal);CHKERRQ(ierr);
130647c6ae99SBarry Smith       ierr  = VecResetArray(yglobal);CHKERRQ(ierr);
130747c6ae99SBarry Smith       ierr  = DMRestoreGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr);
130847c6ae99SBarry Smith       ierr  = DMRestoreGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr);
130947c6ae99SBarry Smith       anext = anext->next;
131047c6ae99SBarry Smith     } else {
131147c6ae99SBarry Smith       SETERRQ(((PetscObject)A)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
131247c6ae99SBarry Smith     }
131347c6ae99SBarry Smith     xnext = xnext->next;
131447c6ae99SBarry Smith     ynext = ynext->next;
131547c6ae99SBarry Smith   }
131647c6ae99SBarry Smith   PetscFunctionReturn(0);
131747c6ae99SBarry Smith }
131847c6ae99SBarry Smith 
131947c6ae99SBarry Smith #undef __FUNCT__
132047c6ae99SBarry Smith #define __FUNCT__ "MatMultAdd_Shell_Pack"
132147c6ae99SBarry Smith PetscErrorCode MatMultAdd_Shell_Pack(Mat A,Vec x,Vec y,Vec z)
132247c6ae99SBarry Smith {
132347c6ae99SBarry Smith   PetscErrorCode ierr;
132447c6ae99SBarry Smith   PetscFunctionBegin;
132547c6ae99SBarry Smith   if (z != y) SETERRQ(((PetscObject)A)->comm,PETSC_ERR_SUP,"Handles y == z only");
132647c6ae99SBarry Smith   ierr = MatMultBoth_Shell_Pack(A,x,y,PETSC_TRUE);CHKERRQ(ierr);
132747c6ae99SBarry Smith   PetscFunctionReturn(0);
132847c6ae99SBarry Smith }
132947c6ae99SBarry Smith 
133047c6ae99SBarry Smith #undef __FUNCT__
133147c6ae99SBarry Smith #define __FUNCT__ "MatMult_Shell_Pack"
133247c6ae99SBarry Smith PetscErrorCode MatMult_Shell_Pack(Mat A,Vec x,Vec y)
133347c6ae99SBarry Smith {
133447c6ae99SBarry Smith   PetscErrorCode ierr;
133547c6ae99SBarry Smith   PetscFunctionBegin;
133647c6ae99SBarry Smith   ierr = MatMultBoth_Shell_Pack(A,x,y,PETSC_FALSE);CHKERRQ(ierr);
133747c6ae99SBarry Smith   PetscFunctionReturn(0);
133847c6ae99SBarry Smith }
133947c6ae99SBarry Smith 
134047c6ae99SBarry Smith #undef __FUNCT__
134147c6ae99SBarry Smith #define __FUNCT__ "MatMultTranspose_Shell_Pack"
134247c6ae99SBarry Smith PetscErrorCode MatMultTranspose_Shell_Pack(Mat A,Vec x,Vec y)
134347c6ae99SBarry Smith {
134447c6ae99SBarry Smith   struct MatPack         *mpack;
134547c6ae99SBarry Smith   struct DMCompositeLink *xnext,*ynext;
134647c6ae99SBarry Smith   struct MatPackLink     *anext;
134747c6ae99SBarry Smith   PetscScalar            *xarray,*yarray;
134847c6ae99SBarry Smith   PetscErrorCode         ierr;
134947c6ae99SBarry Smith   Vec                    xglobal,yglobal;
135047c6ae99SBarry Smith   PetscMPIInt            rank;
135147c6ae99SBarry Smith   DM_Composite           *comright;
135247c6ae99SBarry Smith   DM_Composite           *comleft;
135347c6ae99SBarry Smith 
135447c6ae99SBarry Smith   PetscFunctionBegin;
135547c6ae99SBarry Smith   ierr  = MatShellGetContext(A,(void**)&mpack);CHKERRQ(ierr);
135647c6ae99SBarry Smith   ierr = MPI_Comm_rank(((PetscObject)mpack->right)->comm,&rank);CHKERRQ(ierr);
135747c6ae99SBarry Smith   comright = (DM_Composite*)mpack->right->data;
135847c6ae99SBarry Smith   comleft = (DM_Composite*)mpack->left->data;
135947c6ae99SBarry Smith   ynext = comright->next;
136047c6ae99SBarry Smith   xnext = comleft->next;
136147c6ae99SBarry Smith   anext = mpack->next;
136247c6ae99SBarry Smith 
136347c6ae99SBarry Smith   while (xnext) {
136447c6ae99SBarry Smith     if (xnext->type == DMCOMPOSITE_ARRAY) {
136547c6ae99SBarry Smith       if (rank == ynext->rank) {
136647c6ae99SBarry Smith         ierr    = VecGetArray(x,&xarray);CHKERRQ(ierr);
136747c6ae99SBarry Smith         ierr    = VecGetArray(y,&yarray);CHKERRQ(ierr);
136847c6ae99SBarry Smith         ierr    = PetscMemcpy(yarray+ynext->rstart,xarray+xnext->rstart,xnext->n*sizeof(PetscScalar));CHKERRQ(ierr);
136947c6ae99SBarry Smith         ierr    = VecRestoreArray(x,&xarray);CHKERRQ(ierr);
137047c6ae99SBarry Smith         ierr    = VecRestoreArray(y,&yarray);CHKERRQ(ierr);
137147c6ae99SBarry Smith       }
137247c6ae99SBarry Smith     } else if (xnext->type == DMCOMPOSITE_DM) {
137347c6ae99SBarry Smith       ierr  = VecGetArray(x,&xarray);CHKERRQ(ierr);
137447c6ae99SBarry Smith       ierr  = VecGetArray(y,&yarray);CHKERRQ(ierr);
137547c6ae99SBarry Smith       ierr  = DMGetGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr);
137647c6ae99SBarry Smith       ierr  = DMGetGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr);
137747c6ae99SBarry Smith       ierr  = VecPlaceArray(xglobal,xarray+xnext->rstart);CHKERRQ(ierr);
137847c6ae99SBarry Smith       ierr  = VecPlaceArray(yglobal,yarray+ynext->rstart);CHKERRQ(ierr);
137947c6ae99SBarry Smith       ierr  = MatMultTranspose(anext->A,xglobal,yglobal);CHKERRQ(ierr);
138047c6ae99SBarry Smith       ierr  = VecRestoreArray(x,&xarray);CHKERRQ(ierr);
138147c6ae99SBarry Smith       ierr  = VecRestoreArray(y,&yarray);CHKERRQ(ierr);
138247c6ae99SBarry Smith       ierr  = VecResetArray(xglobal);CHKERRQ(ierr);
138347c6ae99SBarry Smith       ierr  = VecResetArray(yglobal);CHKERRQ(ierr);
138447c6ae99SBarry Smith       ierr  = DMRestoreGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr);
138547c6ae99SBarry Smith       ierr  = DMRestoreGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr);
138647c6ae99SBarry Smith       anext = anext->next;
138747c6ae99SBarry Smith     } else {
138847c6ae99SBarry Smith       SETERRQ(((PetscObject)A)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
138947c6ae99SBarry Smith     }
139047c6ae99SBarry Smith     xnext = xnext->next;
139147c6ae99SBarry Smith     ynext = ynext->next;
139247c6ae99SBarry Smith   }
139347c6ae99SBarry Smith   PetscFunctionReturn(0);
139447c6ae99SBarry Smith }
139547c6ae99SBarry Smith 
139647c6ae99SBarry Smith #undef __FUNCT__
139747c6ae99SBarry Smith #define __FUNCT__ "MatDestroy_Shell_Pack"
139847c6ae99SBarry Smith PetscErrorCode MatDestroy_Shell_Pack(Mat A)
139947c6ae99SBarry Smith {
140047c6ae99SBarry Smith   struct MatPack     *mpack;
140147c6ae99SBarry Smith   struct MatPackLink *anext,*oldanext;
140247c6ae99SBarry Smith   PetscErrorCode     ierr;
140347c6ae99SBarry Smith 
140447c6ae99SBarry Smith   PetscFunctionBegin;
140547c6ae99SBarry Smith   ierr  = MatShellGetContext(A,(void**)&mpack);CHKERRQ(ierr);
140647c6ae99SBarry Smith   anext = mpack->next;
140747c6ae99SBarry Smith 
140847c6ae99SBarry Smith   while (anext) {
140947c6ae99SBarry Smith     ierr     = MatDestroy(anext->A);CHKERRQ(ierr);
141047c6ae99SBarry Smith     oldanext = anext;
141147c6ae99SBarry Smith     anext    = anext->next;
141247c6ae99SBarry Smith     ierr     = PetscFree(oldanext);CHKERRQ(ierr);
141347c6ae99SBarry Smith   }
141447c6ae99SBarry Smith   ierr = PetscFree(mpack);CHKERRQ(ierr);
141547c6ae99SBarry Smith   ierr = PetscObjectChangeTypeName((PetscObject)A,0);CHKERRQ(ierr);
141647c6ae99SBarry Smith   PetscFunctionReturn(0);
141747c6ae99SBarry Smith }
141847c6ae99SBarry Smith 
141947c6ae99SBarry Smith #undef __FUNCT__
1420*0c010503SBarry Smith #define __FUNCT__ "DMGetInterpolation_Composite"
1421*0c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMGetInterpolation_Composite(DM coarse,DM fine,Mat *A,Vec *v)
142247c6ae99SBarry Smith {
142347c6ae99SBarry Smith   PetscErrorCode         ierr;
142447c6ae99SBarry Smith   PetscInt               m,n,M,N;
142547c6ae99SBarry Smith   struct DMCompositeLink *nextc;
142647c6ae99SBarry Smith   struct DMCompositeLink *nextf;
142747c6ae99SBarry Smith   struct MatPackLink     *nextmat,*pnextmat = 0;
142847c6ae99SBarry Smith   struct MatPack         *mpack;
142947c6ae99SBarry Smith   Vec                    gcoarse,gfine;
143047c6ae99SBarry Smith   DM_Composite           *comcoarse = (DM_Composite*)coarse->data;
143147c6ae99SBarry Smith   DM_Composite           *comfine = (DM_Composite*)fine->data;
143247c6ae99SBarry Smith 
143347c6ae99SBarry Smith   PetscFunctionBegin;
143447c6ae99SBarry Smith   PetscValidHeaderSpecific(coarse,DM_CLASSID,1);
143547c6ae99SBarry Smith   PetscValidHeaderSpecific(fine,DM_CLASSID,2);
143647c6ae99SBarry Smith   nextc = comcoarse->next;
143747c6ae99SBarry Smith   nextf = comfine->next;
143847c6ae99SBarry Smith   /* use global vectors only for determining matrix layout */
1439*0c010503SBarry Smith   ierr = DMCreateGlobalVector(coarse,&gcoarse);CHKERRQ(ierr);
1440*0c010503SBarry Smith   ierr = DMCreateGlobalVector(fine,&gfine);CHKERRQ(ierr);
144147c6ae99SBarry Smith   ierr = VecGetLocalSize(gcoarse,&n);CHKERRQ(ierr);
144247c6ae99SBarry Smith   ierr = VecGetLocalSize(gfine,&m);CHKERRQ(ierr);
144347c6ae99SBarry Smith   ierr = VecGetSize(gcoarse,&N);CHKERRQ(ierr);
144447c6ae99SBarry Smith   ierr = VecGetSize(gfine,&M);CHKERRQ(ierr);
144547c6ae99SBarry Smith   ierr = VecDestroy(gcoarse);CHKERRQ(ierr);
144647c6ae99SBarry Smith   ierr = VecDestroy(gfine);CHKERRQ(ierr);
144747c6ae99SBarry Smith 
144847c6ae99SBarry Smith   ierr         = PetscNew(struct MatPack,&mpack);CHKERRQ(ierr);
144947c6ae99SBarry Smith   mpack->right = coarse;
145047c6ae99SBarry Smith   mpack->left  = fine;
145147c6ae99SBarry Smith   ierr  = MatCreate(((PetscObject)fine)->comm,A);CHKERRQ(ierr);
145247c6ae99SBarry Smith   ierr  = MatSetSizes(*A,m,n,M,N);CHKERRQ(ierr);
145347c6ae99SBarry Smith   ierr  = MatSetType(*A,MATSHELL);CHKERRQ(ierr);
145447c6ae99SBarry Smith   ierr  = MatShellSetContext(*A,mpack);CHKERRQ(ierr);
145547c6ae99SBarry Smith   ierr  = MatShellSetOperation(*A,MATOP_MULT,(void(*)(void))MatMult_Shell_Pack);CHKERRQ(ierr);
145647c6ae99SBarry Smith   ierr  = MatShellSetOperation(*A,MATOP_MULT_TRANSPOSE,(void(*)(void))MatMultTranspose_Shell_Pack);CHKERRQ(ierr);
145747c6ae99SBarry Smith   ierr  = MatShellSetOperation(*A,MATOP_MULT_ADD,(void(*)(void))MatMultAdd_Shell_Pack);CHKERRQ(ierr);
145847c6ae99SBarry Smith   ierr  = MatShellSetOperation(*A,MATOP_DESTROY,(void(*)(void))MatDestroy_Shell_Pack);CHKERRQ(ierr);
145947c6ae99SBarry Smith 
146047c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
146147c6ae99SBarry Smith   while (nextc) {
146247c6ae99SBarry Smith     if (nextc->type != nextf->type) SETERRQ(((PetscObject)fine)->comm,PETSC_ERR_ARG_INCOMP,"Two DM have different layout");
146347c6ae99SBarry Smith 
146447c6ae99SBarry Smith     if (nextc->type == DMCOMPOSITE_ARRAY) {
146547c6ae99SBarry Smith       ;
146647c6ae99SBarry Smith     } else if (nextc->type == DMCOMPOSITE_DM) {
146747c6ae99SBarry Smith       ierr          = PetscNew(struct MatPackLink,&nextmat);CHKERRQ(ierr);
146847c6ae99SBarry Smith       nextmat->next = 0;
146947c6ae99SBarry Smith       if (pnextmat) {
147047c6ae99SBarry Smith         pnextmat->next = nextmat;
147147c6ae99SBarry Smith         pnextmat       = nextmat;
147247c6ae99SBarry Smith       } else {
147347c6ae99SBarry Smith         pnextmat    = nextmat;
147447c6ae99SBarry Smith         mpack->next = nextmat;
147547c6ae99SBarry Smith       }
147647c6ae99SBarry Smith       ierr = DMGetInterpolation(nextc->dm,nextf->dm,&nextmat->A,PETSC_NULL);CHKERRQ(ierr);
147747c6ae99SBarry Smith     } else {
147847c6ae99SBarry Smith       SETERRQ(((PetscObject)fine)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
147947c6ae99SBarry Smith     }
148047c6ae99SBarry Smith     nextc = nextc->next;
148147c6ae99SBarry Smith     nextf = nextf->next;
148247c6ae99SBarry Smith   }
148347c6ae99SBarry Smith   PetscFunctionReturn(0);
148447c6ae99SBarry Smith }
148547c6ae99SBarry Smith 
148647c6ae99SBarry Smith #undef __FUNCT__
1487*0c010503SBarry Smith #define __FUNCT__ "DMGetMatrix_Composite"
1488*0c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMGetMatrix_Composite(DM dm, const MatType mtype,Mat *J)
148947c6ae99SBarry Smith {
149047c6ae99SBarry Smith   PetscErrorCode         ierr;
149147c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
149247c6ae99SBarry Smith   struct DMCompositeLink *next = com->next;
149347c6ae99SBarry Smith   PetscInt               m,*dnz,*onz,i,j,mA;
149447c6ae99SBarry Smith   Mat                    Atmp;
149547c6ae99SBarry Smith   PetscMPIInt            rank;
149647c6ae99SBarry Smith   PetscScalar            zero = 0.0;
149747c6ae99SBarry Smith   PetscBool              dense = PETSC_FALSE;
149847c6ae99SBarry Smith 
149947c6ae99SBarry Smith   PetscFunctionBegin;
150047c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
150147c6ae99SBarry Smith 
150247c6ae99SBarry Smith   /* use global vector to determine layout needed for matrix */
150347c6ae99SBarry Smith   m = com->n;
150447c6ae99SBarry Smith   ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr);
150547c6ae99SBarry Smith   ierr = MatCreate(((PetscObject)dm)->comm,J);CHKERRQ(ierr);
150647c6ae99SBarry Smith   ierr = MatSetSizes(*J,m,m,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr);
150747c6ae99SBarry Smith   ierr = MatSetType(*J,MATAIJ);CHKERRQ(ierr);
150847c6ae99SBarry Smith 
150947c6ae99SBarry Smith   /*
151047c6ae99SBarry Smith      Extremely inefficient but will compute entire Jacobian for testing
151147c6ae99SBarry Smith   */
151247c6ae99SBarry Smith   ierr = PetscOptionsGetTruth(PETSC_NULL,"-dmcomposite_dense_jacobian",&dense,PETSC_NULL);CHKERRQ(ierr);
151347c6ae99SBarry Smith   if (dense) {
151447c6ae99SBarry Smith     PetscInt    rstart,rend,*indices;
151547c6ae99SBarry Smith     PetscScalar *values;
151647c6ae99SBarry Smith 
151747c6ae99SBarry Smith     mA    = com->N;
151847c6ae99SBarry Smith     ierr = MatMPIAIJSetPreallocation(*J,mA,PETSC_NULL,mA-m,PETSC_NULL);CHKERRQ(ierr);
151947c6ae99SBarry Smith     ierr = MatSeqAIJSetPreallocation(*J,mA,PETSC_NULL);CHKERRQ(ierr);
152047c6ae99SBarry Smith 
152147c6ae99SBarry Smith     ierr = MatGetOwnershipRange(*J,&rstart,&rend);CHKERRQ(ierr);
152247c6ae99SBarry Smith     ierr = PetscMalloc2(mA,PetscScalar,&values,mA,PetscInt,&indices);CHKERRQ(ierr);
152347c6ae99SBarry Smith     ierr = PetscMemzero(values,mA*sizeof(PetscScalar));CHKERRQ(ierr);
152447c6ae99SBarry Smith     for (i=0; i<mA; i++) indices[i] = i;
152547c6ae99SBarry Smith     for (i=rstart; i<rend; i++) {
152647c6ae99SBarry Smith       ierr = MatSetValues(*J,1,&i,mA,indices,values,INSERT_VALUES);CHKERRQ(ierr);
152747c6ae99SBarry Smith     }
152847c6ae99SBarry Smith     ierr = PetscFree2(values,indices);CHKERRQ(ierr);
152947c6ae99SBarry Smith     ierr = MatAssemblyBegin(*J,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
153047c6ae99SBarry Smith     ierr = MatAssemblyEnd(*J,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
153147c6ae99SBarry Smith     PetscFunctionReturn(0);
153247c6ae99SBarry Smith   }
153347c6ae99SBarry Smith 
153447c6ae99SBarry Smith   ierr = MatPreallocateInitialize(((PetscObject)dm)->comm,m,m,dnz,onz);CHKERRQ(ierr);
153547c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
153647c6ae99SBarry Smith   next = com->next;
153747c6ae99SBarry Smith   while (next) {
153847c6ae99SBarry Smith     if (next->type == DMCOMPOSITE_ARRAY) {
153947c6ae99SBarry Smith       if (rank == next->rank) {  /* zero the "little" block */
154047c6ae99SBarry Smith         for (j=com->rstart+next->rstart; j<com->rstart+next->rstart+next->n; j++) {
154147c6ae99SBarry Smith           for (i=com->rstart+next->rstart; i<com->rstart+next->rstart+next->n; i++) {
154247c6ae99SBarry Smith             ierr = MatPreallocateSet(j,1,&i,dnz,onz);CHKERRQ(ierr);
154347c6ae99SBarry Smith           }
154447c6ae99SBarry Smith         }
154547c6ae99SBarry Smith       }
154647c6ae99SBarry Smith     } else if (next->type == DMCOMPOSITE_DM) {
154747c6ae99SBarry Smith       PetscInt       nc,rstart,*ccols,maxnc;
154847c6ae99SBarry Smith       const PetscInt *cols,*rstarts;
154947c6ae99SBarry Smith       PetscMPIInt    proc;
155047c6ae99SBarry Smith 
155147c6ae99SBarry Smith       ierr = DMGetMatrix(next->dm,mtype,&Atmp);CHKERRQ(ierr);
155247c6ae99SBarry Smith       ierr = MatGetOwnershipRange(Atmp,&rstart,PETSC_NULL);CHKERRQ(ierr);
155347c6ae99SBarry Smith       ierr = MatGetOwnershipRanges(Atmp,&rstarts);CHKERRQ(ierr);
155447c6ae99SBarry Smith       ierr = MatGetLocalSize(Atmp,&mA,PETSC_NULL);CHKERRQ(ierr);
155547c6ae99SBarry Smith 
155647c6ae99SBarry Smith       maxnc = 0;
155747c6ae99SBarry Smith       for (i=0; i<mA; i++) {
155847c6ae99SBarry Smith         ierr  = MatGetRow(Atmp,rstart+i,&nc,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr);
155947c6ae99SBarry Smith         ierr  = MatRestoreRow(Atmp,rstart+i,&nc,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr);
156047c6ae99SBarry Smith         maxnc = PetscMax(nc,maxnc);
156147c6ae99SBarry Smith       }
156247c6ae99SBarry Smith       ierr = PetscMalloc(maxnc*sizeof(PetscInt),&ccols);CHKERRQ(ierr);
156347c6ae99SBarry Smith       for (i=0; i<mA; i++) {
156447c6ae99SBarry Smith         ierr = MatGetRow(Atmp,rstart+i,&nc,&cols,PETSC_NULL);CHKERRQ(ierr);
156547c6ae99SBarry Smith         /* remap the columns taking into how much they are shifted on each process */
156647c6ae99SBarry Smith         for (j=0; j<nc; j++) {
156747c6ae99SBarry Smith           proc = 0;
156847c6ae99SBarry Smith           while (cols[j] >= rstarts[proc+1]) proc++;
156947c6ae99SBarry Smith           ccols[j] = cols[j] + next->grstarts[proc] - rstarts[proc];
157047c6ae99SBarry Smith         }
157147c6ae99SBarry Smith         ierr = MatPreallocateSet(com->rstart+next->rstart+i,nc,ccols,dnz,onz);CHKERRQ(ierr);
157247c6ae99SBarry Smith         ierr = MatRestoreRow(Atmp,rstart+i,&nc,&cols,PETSC_NULL);CHKERRQ(ierr);
157347c6ae99SBarry Smith       }
157447c6ae99SBarry Smith       ierr = PetscFree(ccols);CHKERRQ(ierr);
157547c6ae99SBarry Smith       ierr = MatDestroy(Atmp);CHKERRQ(ierr);
157647c6ae99SBarry Smith     } else {
157747c6ae99SBarry Smith       SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
157847c6ae99SBarry Smith     }
157947c6ae99SBarry Smith     next = next->next;
158047c6ae99SBarry Smith   }
158147c6ae99SBarry Smith   if (com->FormCoupleLocations) {
158247c6ae99SBarry Smith     ierr = (*com->FormCoupleLocations)(dm,PETSC_NULL,dnz,onz,__rstart,__nrows,__start,__end);CHKERRQ(ierr);
158347c6ae99SBarry Smith   }
158447c6ae99SBarry Smith   ierr = MatMPIAIJSetPreallocation(*J,0,dnz,0,onz);CHKERRQ(ierr);
158547c6ae99SBarry Smith   ierr = MatSeqAIJSetPreallocation(*J,0,dnz);CHKERRQ(ierr);
158647c6ae99SBarry Smith   ierr = MatPreallocateFinalize(dnz,onz);CHKERRQ(ierr);
158747c6ae99SBarry Smith 
158847c6ae99SBarry Smith   next = com->next;
158947c6ae99SBarry Smith   while (next) {
159047c6ae99SBarry Smith     if (next->type == DMCOMPOSITE_ARRAY) {
159147c6ae99SBarry Smith       if (rank == next->rank) {
159247c6ae99SBarry Smith         for (j=com->rstart+next->rstart; j<com->rstart+next->rstart+next->n; j++) {
159347c6ae99SBarry Smith           for (i=com->rstart+next->rstart; i<com->rstart+next->rstart+next->n; i++) {
159447c6ae99SBarry Smith             ierr = MatSetValues(*J,1,&j,1,&i,&zero,INSERT_VALUES);CHKERRQ(ierr);
159547c6ae99SBarry Smith           }
159647c6ae99SBarry Smith         }
159747c6ae99SBarry Smith       }
159847c6ae99SBarry Smith     } else if (next->type == DMCOMPOSITE_DM) {
159947c6ae99SBarry Smith       PetscInt          nc,rstart,row,maxnc,*ccols;
160047c6ae99SBarry Smith       const PetscInt    *cols,*rstarts;
160147c6ae99SBarry Smith       const PetscScalar *values;
160247c6ae99SBarry Smith       PetscMPIInt       proc;
160347c6ae99SBarry Smith 
160447c6ae99SBarry Smith       ierr = DMGetMatrix(next->dm,mtype,&Atmp);CHKERRQ(ierr);
160547c6ae99SBarry Smith       ierr = MatGetOwnershipRange(Atmp,&rstart,PETSC_NULL);CHKERRQ(ierr);
160647c6ae99SBarry Smith       ierr = MatGetOwnershipRanges(Atmp,&rstarts);CHKERRQ(ierr);
160747c6ae99SBarry Smith       ierr = MatGetLocalSize(Atmp,&mA,PETSC_NULL);CHKERRQ(ierr);
160847c6ae99SBarry Smith       maxnc = 0;
160947c6ae99SBarry Smith       for (i=0; i<mA; i++) {
161047c6ae99SBarry Smith         ierr  = MatGetRow(Atmp,rstart+i,&nc,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr);
161147c6ae99SBarry Smith         ierr  = MatRestoreRow(Atmp,rstart+i,&nc,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr);
161247c6ae99SBarry Smith         maxnc = PetscMax(nc,maxnc);
161347c6ae99SBarry Smith       }
161447c6ae99SBarry Smith       ierr = PetscMalloc(maxnc*sizeof(PetscInt),&ccols);CHKERRQ(ierr);
161547c6ae99SBarry Smith       for (i=0; i<mA; i++) {
161647c6ae99SBarry Smith         ierr = MatGetRow(Atmp,rstart+i,&nc,(const PetscInt **)&cols,&values);CHKERRQ(ierr);
161747c6ae99SBarry Smith         for (j=0; j<nc; j++) {
161847c6ae99SBarry Smith           proc = 0;
161947c6ae99SBarry Smith           while (cols[j] >= rstarts[proc+1]) proc++;
162047c6ae99SBarry Smith           ccols[j] = cols[j] + next->grstarts[proc] - rstarts[proc];
162147c6ae99SBarry Smith         }
162247c6ae99SBarry Smith         row  = com->rstart+next->rstart+i;
162347c6ae99SBarry Smith         ierr = MatSetValues(*J,1,&row,nc,ccols,values,INSERT_VALUES);CHKERRQ(ierr);
162447c6ae99SBarry Smith         ierr = MatRestoreRow(Atmp,rstart+i,&nc,(const PetscInt **)&cols,&values);CHKERRQ(ierr);
162547c6ae99SBarry Smith       }
162647c6ae99SBarry Smith       ierr = PetscFree(ccols);CHKERRQ(ierr);
162747c6ae99SBarry Smith       ierr = MatDestroy(Atmp);CHKERRQ(ierr);
162847c6ae99SBarry Smith     } else {
162947c6ae99SBarry Smith       SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
163047c6ae99SBarry Smith     }
163147c6ae99SBarry Smith     next = next->next;
163247c6ae99SBarry Smith   }
163347c6ae99SBarry Smith   if (com->FormCoupleLocations) {
163447c6ae99SBarry Smith     PetscInt __rstart;
163547c6ae99SBarry Smith     ierr = MatGetOwnershipRange(*J,&__rstart,PETSC_NULL);CHKERRQ(ierr);
163647c6ae99SBarry Smith     ierr = (*com->FormCoupleLocations)(dm,*J,PETSC_NULL,PETSC_NULL,__rstart,0,0,0);CHKERRQ(ierr);
163747c6ae99SBarry Smith   }
163847c6ae99SBarry Smith   ierr = MatAssemblyBegin(*J,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
163947c6ae99SBarry Smith   ierr = MatAssemblyEnd(*J,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
164047c6ae99SBarry Smith   PetscFunctionReturn(0);
164147c6ae99SBarry Smith }
164247c6ae99SBarry Smith 
164347c6ae99SBarry Smith #undef __FUNCT__
1644*0c010503SBarry Smith #define __FUNCT__ "DMGetColoring_Composite"
1645*0c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMGetColoring_Composite(DM dm,ISColoringType ctype,const MatType mtype,ISColoring *coloring)
164647c6ae99SBarry Smith {
164747c6ae99SBarry Smith   PetscErrorCode         ierr;
164847c6ae99SBarry Smith   PetscInt               n,i,cnt;
164947c6ae99SBarry Smith   ISColoringValue        *colors;
165047c6ae99SBarry Smith   PetscBool              dense = PETSC_FALSE;
165147c6ae99SBarry Smith   ISColoringValue        maxcol = 0;
165247c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
165347c6ae99SBarry Smith 
165447c6ae99SBarry Smith   PetscFunctionBegin;
165547c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
165647c6ae99SBarry Smith   if (ctype == IS_COLORING_GHOSTED) {
165747c6ae99SBarry Smith     SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Currently you must use -dmmg_iscoloring_type global" );
165847c6ae99SBarry Smith   } else if (ctype == IS_COLORING_GLOBAL) {
165947c6ae99SBarry Smith     n = com->n;
166047c6ae99SBarry Smith   } else SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_ARG_OUTOFRANGE,"Unknown ISColoringType");
166147c6ae99SBarry Smith   ierr = PetscMalloc(n*sizeof(ISColoringValue),&colors);CHKERRQ(ierr); /* freed in ISColoringDestroy() */
166247c6ae99SBarry Smith 
166347c6ae99SBarry Smith   ierr = PetscOptionsGetTruth(PETSC_NULL,"-dmcomposite_dense_jacobian",&dense,PETSC_NULL);CHKERRQ(ierr);
166447c6ae99SBarry Smith   if (dense) {
166547c6ae99SBarry Smith     for (i=0; i<n; i++) {
166647c6ae99SBarry Smith       colors[i] = (ISColoringValue)(com->rstart + i);
166747c6ae99SBarry Smith     }
166847c6ae99SBarry Smith     maxcol = com->N;
166947c6ae99SBarry Smith   } else {
167047c6ae99SBarry Smith     struct DMCompositeLink *next = com->next;
167147c6ae99SBarry Smith     PetscMPIInt            rank;
167247c6ae99SBarry Smith 
167347c6ae99SBarry Smith     ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr);
167447c6ae99SBarry Smith     cnt  = 0;
167547c6ae99SBarry Smith     while (next) {
167647c6ae99SBarry Smith       if (next->type == DMCOMPOSITE_ARRAY) {
167747c6ae99SBarry Smith         if (rank == next->rank) {  /* each column gets is own color */
167847c6ae99SBarry Smith           for (i=com->rstart+next->rstart; i<com->rstart+next->rstart+next->n; i++) {
167947c6ae99SBarry Smith             colors[cnt++] = maxcol++;
168047c6ae99SBarry Smith           }
168147c6ae99SBarry Smith         }
168247c6ae99SBarry Smith         ierr = MPI_Bcast(&maxcol,1,MPIU_COLORING_VALUE,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr);
168347c6ae99SBarry Smith       } else if (next->type == DMCOMPOSITE_DM) {
168447c6ae99SBarry Smith         ISColoring     lcoloring;
168547c6ae99SBarry Smith 
168647c6ae99SBarry Smith         ierr = DMGetColoring(next->dm,IS_COLORING_GLOBAL,mtype,&lcoloring);CHKERRQ(ierr);
168747c6ae99SBarry Smith         for (i=0; i<lcoloring->N; i++) {
168847c6ae99SBarry Smith           colors[cnt++] = maxcol + lcoloring->colors[i];
168947c6ae99SBarry Smith         }
169047c6ae99SBarry Smith         maxcol += lcoloring->n;
169147c6ae99SBarry Smith         ierr = ISColoringDestroy(lcoloring);CHKERRQ(ierr);
169247c6ae99SBarry Smith       } else {
169347c6ae99SBarry Smith         SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
169447c6ae99SBarry Smith       }
169547c6ae99SBarry Smith       next = next->next;
169647c6ae99SBarry Smith     }
169747c6ae99SBarry Smith   }
169847c6ae99SBarry Smith   ierr = ISColoringCreate(((PetscObject)dm)->comm,maxcol,n,colors,coloring);CHKERRQ(ierr);
169947c6ae99SBarry Smith   PetscFunctionReturn(0);
170047c6ae99SBarry Smith }
170147c6ae99SBarry Smith 
170247c6ae99SBarry Smith #undef __FUNCT__
1703*0c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalBegin_Composite"
1704*0c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMGlobalToLocalBegin_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec)
170547c6ae99SBarry Smith {
170647c6ae99SBarry Smith   PetscErrorCode         ierr;
170747c6ae99SBarry Smith   struct DMCompositeLink *next;
170847c6ae99SBarry Smith   PetscInt               cnt = 3;
170947c6ae99SBarry Smith   PetscMPIInt            rank;
171047c6ae99SBarry Smith   PetscScalar            *garray,*larray;
171147c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
171247c6ae99SBarry Smith 
171347c6ae99SBarry Smith   PetscFunctionBegin;
171447c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
171547c6ae99SBarry Smith   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
171647c6ae99SBarry Smith   next = com->next;
171747c6ae99SBarry Smith   if (!com->setup) {
171847c6ae99SBarry Smith     ierr = DMCompositeSetUp(dm);CHKERRQ(ierr);
171947c6ae99SBarry Smith   }
172047c6ae99SBarry Smith   ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr);
172147c6ae99SBarry Smith   ierr = VecGetArray(gvec,&garray);CHKERRQ(ierr);
172247c6ae99SBarry Smith   ierr = VecGetArray(lvec,&larray);CHKERRQ(ierr);
172347c6ae99SBarry Smith 
172447c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
172547c6ae99SBarry Smith   while (next) {
172647c6ae99SBarry Smith     if (next->type == DMCOMPOSITE_ARRAY) {
172747c6ae99SBarry Smith       if (rank == next->rank) {
172847c6ae99SBarry Smith         ierr    = PetscMemcpy(larray,garray,next->n*sizeof(PetscScalar));CHKERRQ(ierr);
172947c6ae99SBarry Smith         garray += next->n;
173047c6ae99SBarry Smith       }
173147c6ae99SBarry Smith       /* does not handle ADD_VALUES */
173247c6ae99SBarry Smith       ierr = MPI_Bcast(larray,next->n,MPIU_SCALAR,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr);
173347c6ae99SBarry Smith       larray += next->n;
173447c6ae99SBarry Smith     } else if (next->type == DMCOMPOSITE_DM) {
173547c6ae99SBarry Smith       Vec      local,global;
173647c6ae99SBarry Smith       PetscInt N;
173747c6ae99SBarry Smith 
173847c6ae99SBarry Smith       ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr);
173947c6ae99SBarry Smith       ierr = VecGetLocalSize(global,&N);CHKERRQ(ierr);
174047c6ae99SBarry Smith       ierr = VecPlaceArray(global,garray);CHKERRQ(ierr);
174147c6ae99SBarry Smith       ierr = DMGetLocalVector(next->dm,&local);CHKERRQ(ierr);
174247c6ae99SBarry Smith       ierr = VecPlaceArray(local,larray);CHKERRQ(ierr);
174347c6ae99SBarry Smith       ierr = DMGlobalToLocalBegin(next->dm,global,mode,local);CHKERRQ(ierr);
174447c6ae99SBarry Smith       ierr = DMGlobalToLocalEnd(next->dm,global,mode,local);CHKERRQ(ierr);
174547c6ae99SBarry Smith       ierr = VecResetArray(global);CHKERRQ(ierr);
174647c6ae99SBarry Smith       ierr = VecResetArray(local);CHKERRQ(ierr);
174747c6ae99SBarry Smith       ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr);
174847c6ae99SBarry Smith       ierr = DMRestoreGlobalVector(next->dm,&local);CHKERRQ(ierr);
174947c6ae99SBarry Smith       larray += next->n;
175047c6ae99SBarry Smith     } else {
175147c6ae99SBarry Smith       SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet");
175247c6ae99SBarry Smith     }
175347c6ae99SBarry Smith     cnt++;
175447c6ae99SBarry Smith     next = next->next;
175547c6ae99SBarry Smith   }
175647c6ae99SBarry Smith 
175747c6ae99SBarry Smith   ierr = VecRestoreArray(gvec,PETSC_NULL);CHKERRQ(ierr);
175847c6ae99SBarry Smith   ierr = VecRestoreArray(lvec,PETSC_NULL);CHKERRQ(ierr);
175947c6ae99SBarry Smith   PetscFunctionReturn(0);
176047c6ae99SBarry Smith }
176147c6ae99SBarry Smith 
176247c6ae99SBarry Smith #undef __FUNCT__
1763*0c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalEnd_Composite"
1764*0c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMGlobalToLocalEnd_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec)
1765*0c010503SBarry Smith {
1766*0c010503SBarry Smith   PetscFunctionBegin;
1767*0c010503SBarry Smith   PetscFunctionReturn(0);
1768*0c010503SBarry Smith }
176947c6ae99SBarry Smith 
1770*0c010503SBarry Smith #undef __FUNCT__
1771*0c010503SBarry Smith #define __FUNCT__ "DMCompositeCreate"
1772*0c010503SBarry Smith /*@C
1773*0c010503SBarry Smith     DMCompositeCreate - Creates a vector packer, used to generate "composite"
1774*0c010503SBarry Smith       vectors made up of several subvectors.
1775*0c010503SBarry Smith 
1776*0c010503SBarry Smith     Collective on MPI_Comm
177747c6ae99SBarry Smith 
177847c6ae99SBarry Smith     Input Parameter:
1779*0c010503SBarry Smith .   comm - the processors that will share the global vector
1780*0c010503SBarry Smith 
1781*0c010503SBarry Smith     Output Parameters:
1782*0c010503SBarry Smith .   packer - the packer object
178347c6ae99SBarry Smith 
178447c6ae99SBarry Smith     Level: advanced
178547c6ae99SBarry Smith 
1786*0c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCompositeScatter(),
1787*0c010503SBarry Smith          DMCompositeGather(), DMCreateGlobalVector(), DMCompositeGetGlobalIndices(), DMCompositeGetAccess()
178847c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries()
178947c6ae99SBarry Smith 
179047c6ae99SBarry Smith @*/
1791*0c010503SBarry Smith PetscErrorCode PETSCDM_DLLEXPORT DMCompositeCreate(MPI_Comm comm,DM *packer)
179247c6ae99SBarry Smith {
1793*0c010503SBarry Smith   PetscErrorCode ierr;
1794*0c010503SBarry Smith   DM             p;
1795*0c010503SBarry Smith   DM_Composite   *com;
1796*0c010503SBarry Smith 
179747c6ae99SBarry Smith   PetscFunctionBegin;
1798*0c010503SBarry Smith   PetscValidPointer(packer,2);
1799*0c010503SBarry Smith   *packer = PETSC_NULL;
1800*0c010503SBarry Smith #ifndef PETSC_USE_DYNAMIC_LIBRARIES
1801*0c010503SBarry Smith   ierr = DMInitializePackage(PETSC_NULL);CHKERRQ(ierr);
1802*0c010503SBarry Smith #endif
1803*0c010503SBarry Smith 
1804*0c010503SBarry Smith   ierr = PetscHeaderCreate(p,_p_DM,struct _DMOps,DM_CLASSID,0,"DM",comm,DMDestroy,DMView);CHKERRQ(ierr);
1805*0c010503SBarry Smith   ierr = PetscNewLog(p,DM_Composite,&com);CHKERRQ(ierr);
1806*0c010503SBarry Smith   p->data = com;
1807*0c010503SBarry Smith   ierr = PetscObjectChangeTypeName((PetscObject)p,"DMComposite");CHKERRQ(ierr);
1808*0c010503SBarry Smith   com->n            = 0;
1809*0c010503SBarry Smith   com->next         = PETSC_NULL;
1810*0c010503SBarry Smith   com->nredundant   = 0;
1811*0c010503SBarry Smith   com->nDM          = 0;
1812*0c010503SBarry Smith 
1813*0c010503SBarry Smith   p->ops->createglobalvector = DMCreateGlobalVector_Composite;
1814*0c010503SBarry Smith   p->ops->createlocalvector  = DMCreateLocalVector_Composite;
1815*0c010503SBarry Smith   p->ops->refine             = DMRefine_Composite;
1816*0c010503SBarry Smith   p->ops->getinterpolation   = DMGetInterpolation_Composite;
1817*0c010503SBarry Smith   p->ops->getmatrix          = DMGetMatrix_Composite;
1818*0c010503SBarry Smith   p->ops->getcoloring        = DMGetColoring_Composite;
1819*0c010503SBarry Smith   p->ops->globaltolocalbegin = DMGlobalToLocalBegin_Composite;
1820*0c010503SBarry Smith   p->ops->globaltolocalend   = DMGlobalToLocalEnd_Composite;
1821*0c010503SBarry Smith   p->ops->destroy            = DMDestroy_Composite;
1822*0c010503SBarry Smith   p->ops->view               = DMView_Composite;
1823*0c010503SBarry Smith 
1824*0c010503SBarry Smith   *packer = p;
182547c6ae99SBarry Smith   PetscFunctionReturn(0);
182647c6ae99SBarry Smith }
1827