147c6ae99SBarry Smith 2ccd284c7SBarry Smith #include <../src/dm/impls/composite/packimpl.h> /*I "petscdmcomposite.h" I*/ 347c6ae99SBarry Smith 447c6ae99SBarry Smith #undef __FUNCT__ 547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeSetCoupling" 647c6ae99SBarry Smith /*@C 747c6ae99SBarry Smith DMCompositeSetCoupling - Sets user provided routines that compute the coupling between the 89ae5db72SJed Brown seperate components (DMs) in a DMto build the correct matrix nonzero structure. 947c6ae99SBarry Smith 1047c6ae99SBarry Smith 1147c6ae99SBarry Smith Logically Collective on MPI_Comm 1247c6ae99SBarry Smith 1347c6ae99SBarry Smith Input Parameter: 1447c6ae99SBarry Smith + dm - the composite object 1547c6ae99SBarry Smith - formcouplelocations - routine to set the nonzero locations in the matrix 1647c6ae99SBarry Smith 1747c6ae99SBarry Smith Level: advanced 1847c6ae99SBarry Smith 191b2093e4SBarry Smith Notes: See DMSetApplicationContext() and DMGetApplicationContext() for how to get user information into 2047c6ae99SBarry Smith this routine 2147c6ae99SBarry Smith 2247c6ae99SBarry Smith @*/ 237087cfbeSBarry Smith PetscErrorCode DMCompositeSetCoupling(DM dm,PetscErrorCode (*FormCoupleLocations)(DM,Mat,PetscInt*,PetscInt*,PetscInt,PetscInt,PetscInt,PetscInt)) 2447c6ae99SBarry Smith { 2547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 2647c6ae99SBarry Smith 2747c6ae99SBarry Smith PetscFunctionBegin; 2847c6ae99SBarry Smith com->FormCoupleLocations = FormCoupleLocations; 2947c6ae99SBarry Smith PetscFunctionReturn(0); 3047c6ae99SBarry Smith } 3147c6ae99SBarry Smith 3247c6ae99SBarry Smith #undef __FUNCT__ 330c010503SBarry Smith #define __FUNCT__ "DMDestroy_Composite" 346bf464f9SBarry Smith PetscErrorCode DMDestroy_Composite(DM dm) 3547c6ae99SBarry Smith { 3647c6ae99SBarry Smith PetscErrorCode ierr; 3747c6ae99SBarry Smith struct DMCompositeLink *next, *prev; 3847c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 3947c6ae99SBarry Smith 4047c6ae99SBarry Smith PetscFunctionBegin; 4147c6ae99SBarry Smith next = com->next; 4247c6ae99SBarry Smith while (next) { 4347c6ae99SBarry Smith prev = next; 4447c6ae99SBarry Smith next = next->next; 45fcfd50ebSBarry Smith ierr = DMDestroy(&prev->dm);CHKERRQ(ierr); 4647c6ae99SBarry Smith ierr = PetscFree(prev->grstarts);CHKERRQ(ierr); 4747c6ae99SBarry Smith ierr = PetscFree(prev);CHKERRQ(ierr); 4847c6ae99SBarry Smith } 49435a35e8SMatthew G Knepley /* This was originally freed in DMDestroy(), but that prevents reference counting of backend objects */ 50435a35e8SMatthew G Knepley ierr = PetscFree(com);CHKERRQ(ierr); 5147c6ae99SBarry Smith PetscFunctionReturn(0); 5247c6ae99SBarry Smith } 5347c6ae99SBarry Smith 5447c6ae99SBarry Smith #undef __FUNCT__ 550c010503SBarry Smith #define __FUNCT__ "DMView_Composite" 567087cfbeSBarry Smith PetscErrorCode DMView_Composite(DM dm,PetscViewer v) 5747c6ae99SBarry Smith { 5847c6ae99SBarry Smith PetscErrorCode ierr; 5947c6ae99SBarry Smith PetscBool iascii; 6047c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 6147c6ae99SBarry Smith 6247c6ae99SBarry Smith PetscFunctionBegin; 63251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)v,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 6447c6ae99SBarry Smith if (iascii) { 6547c6ae99SBarry Smith struct DMCompositeLink *lnk = com->next; 6647c6ae99SBarry Smith PetscInt i; 6747c6ae99SBarry Smith 6847c6ae99SBarry Smith ierr = PetscViewerASCIIPrintf(v,"DM (%s)\n",((PetscObject)dm)->prefix ? ((PetscObject)dm)->prefix : "no prefix");CHKERRQ(ierr); 699ae5db72SJed Brown ierr = PetscViewerASCIIPrintf(v," contains %D DMs\n",com->nDM);CHKERRQ(ierr); 7047c6ae99SBarry Smith ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr); 7147c6ae99SBarry Smith for (i=0; lnk; lnk=lnk->next,i++) { 729ae5db72SJed Brown ierr = PetscViewerASCIIPrintf(v,"Link %D: DM of type %s\n",i,((PetscObject)lnk->dm)->type_name);CHKERRQ(ierr); 7347c6ae99SBarry Smith ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr); 7447c6ae99SBarry Smith ierr = DMView(lnk->dm,v);CHKERRQ(ierr); 7547c6ae99SBarry Smith ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr); 7647c6ae99SBarry Smith } 7747c6ae99SBarry Smith ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr); 7847c6ae99SBarry Smith } 7947c6ae99SBarry Smith PetscFunctionReturn(0); 8047c6ae99SBarry Smith } 8147c6ae99SBarry Smith 8247c6ae99SBarry Smith /* --------------------------------------------------------------------------------------*/ 8347c6ae99SBarry Smith #undef __FUNCT__ 84d7bf68aeSBarry Smith #define __FUNCT__ "DMSetUp_Composite" 857087cfbeSBarry Smith PetscErrorCode DMSetUp_Composite(DM dm) 8647c6ae99SBarry Smith { 8747c6ae99SBarry Smith PetscErrorCode ierr; 8847c6ae99SBarry Smith PetscInt nprev = 0; 8947c6ae99SBarry Smith PetscMPIInt rank,size; 9047c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 9147c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 9247c6ae99SBarry Smith PetscLayout map; 9347c6ae99SBarry Smith 9447c6ae99SBarry Smith PetscFunctionBegin; 95ce94432eSBarry Smith if (com->setup) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_ARG_WRONGSTATE,"Packer has already been setup"); 96ce94432eSBarry Smith ierr = PetscLayoutCreate(PetscObjectComm((PetscObject)dm),&map);CHKERRQ(ierr); 9747c6ae99SBarry Smith ierr = PetscLayoutSetLocalSize(map,com->n);CHKERRQ(ierr); 9847c6ae99SBarry Smith ierr = PetscLayoutSetSize(map,PETSC_DETERMINE);CHKERRQ(ierr); 9947c6ae99SBarry Smith ierr = PetscLayoutSetBlockSize(map,1);CHKERRQ(ierr); 10047c6ae99SBarry Smith ierr = PetscLayoutSetUp(map);CHKERRQ(ierr); 10147c6ae99SBarry Smith ierr = PetscLayoutGetSize(map,&com->N);CHKERRQ(ierr); 1020298fd71SBarry Smith ierr = PetscLayoutGetRange(map,&com->rstart,NULL);CHKERRQ(ierr); 103fcfd50ebSBarry Smith ierr = PetscLayoutDestroy(&map);CHKERRQ(ierr); 10447c6ae99SBarry Smith 1059ae5db72SJed Brown /* now set the rstart for each linked vector */ 106ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 107ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)dm),&size);CHKERRQ(ierr); 10847c6ae99SBarry Smith while (next) { 10947c6ae99SBarry Smith next->rstart = nprev; 11006ebdd98SJed Brown nprev += next->n; 11147c6ae99SBarry Smith next->grstart = com->rstart + next->rstart; 112785e854fSJed Brown ierr = PetscMalloc1(size,&next->grstarts);CHKERRQ(ierr); 113ce94432eSBarry Smith ierr = MPI_Allgather(&next->grstart,1,MPIU_INT,next->grstarts,1,MPIU_INT,PetscObjectComm((PetscObject)dm));CHKERRQ(ierr); 11447c6ae99SBarry Smith next = next->next; 11547c6ae99SBarry Smith } 11647c6ae99SBarry Smith com->setup = PETSC_TRUE; 11747c6ae99SBarry Smith PetscFunctionReturn(0); 11847c6ae99SBarry Smith } 11947c6ae99SBarry Smith 12047c6ae99SBarry Smith /* ----------------------------------------------------------------------------------*/ 12147c6ae99SBarry Smith 12247c6ae99SBarry Smith #undef __FUNCT__ 12347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetNumberDM" 12473e31fe2SJed Brown /*@ 12547c6ae99SBarry Smith DMCompositeGetNumberDM - Get's the number of DM objects in the DMComposite 12647c6ae99SBarry Smith representation. 12747c6ae99SBarry Smith 12847c6ae99SBarry Smith Not Collective 12947c6ae99SBarry Smith 13047c6ae99SBarry Smith Input Parameter: 13147c6ae99SBarry Smith . dm - the packer object 13247c6ae99SBarry Smith 13347c6ae99SBarry Smith Output Parameter: 13447c6ae99SBarry Smith . nDM - the number of DMs 13547c6ae99SBarry Smith 13647c6ae99SBarry Smith Level: beginner 13747c6ae99SBarry Smith 13847c6ae99SBarry Smith @*/ 1397087cfbeSBarry Smith PetscErrorCode DMCompositeGetNumberDM(DM dm,PetscInt *nDM) 14047c6ae99SBarry Smith { 14147c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 1425fd66863SKarl Rupp 14347c6ae99SBarry Smith PetscFunctionBegin; 14447c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 14547c6ae99SBarry Smith *nDM = com->nDM; 14647c6ae99SBarry Smith PetscFunctionReturn(0); 14747c6ae99SBarry Smith } 14847c6ae99SBarry Smith 14947c6ae99SBarry Smith 15047c6ae99SBarry Smith #undef __FUNCT__ 15147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess" 15247c6ae99SBarry Smith /*@C 15347c6ae99SBarry Smith DMCompositeGetAccess - Allows one to access the individual packed vectors in their global 15447c6ae99SBarry Smith representation. 15547c6ae99SBarry Smith 15647c6ae99SBarry Smith Collective on DMComposite 15747c6ae99SBarry Smith 1589ae5db72SJed Brown Input Parameters: 15947c6ae99SBarry Smith + dm - the packer object 1609ae5db72SJed Brown - gvec - the global vector 1619ae5db72SJed Brown 1629ae5db72SJed Brown Output Parameters: 1630298fd71SBarry Smith . Vec* ... - the packed parallel vectors, NULL for those that are not needed 16447c6ae99SBarry Smith 16547c6ae99SBarry Smith Notes: Use DMCompositeRestoreAccess() to return the vectors when you no longer need them 16647c6ae99SBarry Smith 167f73e5cebSJed Brown Fortran Notes: 168f73e5cebSJed Brown 169f73e5cebSJed Brown Fortran callers must use numbered versions of this routine, e.g., DMCompositeGetAccess4(dm,gvec,vec1,vec2,vec3,vec4) 170f73e5cebSJed Brown or use the alternative interface DMCompositeGetAccessArray(). 171f73e5cebSJed Brown 17247c6ae99SBarry Smith Level: advanced 17347c6ae99SBarry Smith 174f73e5cebSJed Brown .seealso: DMCompositeGetEntries(), DMCompositeScatter() 17547c6ae99SBarry Smith @*/ 1767087cfbeSBarry Smith PetscErrorCode DMCompositeGetAccess(DM dm,Vec gvec,...) 17747c6ae99SBarry Smith { 17847c6ae99SBarry Smith va_list Argp; 17947c6ae99SBarry Smith PetscErrorCode ierr; 18047c6ae99SBarry Smith struct DMCompositeLink *next; 18147c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 18247c6ae99SBarry Smith 18347c6ae99SBarry Smith PetscFunctionBegin; 18447c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 18547c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 18647c6ae99SBarry Smith next = com->next; 18747c6ae99SBarry Smith if (!com->setup) { 188d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 18947c6ae99SBarry Smith } 19047c6ae99SBarry Smith 19147c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 19247c6ae99SBarry Smith va_start(Argp,gvec); 19347c6ae99SBarry Smith while (next) { 19447c6ae99SBarry Smith Vec *vec; 19547c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 1969ae5db72SJed Brown if (vec) { 1979ae5db72SJed Brown PetscScalar *array; 1989ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,vec);CHKERRQ(ierr); 1999ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 2009ae5db72SJed Brown ierr = VecPlaceArray(*vec,array+next->rstart);CHKERRQ(ierr); 2019ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 20247c6ae99SBarry Smith } 20347c6ae99SBarry Smith next = next->next; 20447c6ae99SBarry Smith } 20547c6ae99SBarry Smith va_end(Argp); 20647c6ae99SBarry Smith PetscFunctionReturn(0); 20747c6ae99SBarry Smith } 20847c6ae99SBarry Smith 20947c6ae99SBarry Smith #undef __FUNCT__ 210f73e5cebSJed Brown #define __FUNCT__ "DMCompositeGetAccessArray" 211f73e5cebSJed Brown /*@C 212f73e5cebSJed Brown DMCompositeGetAccessArray - Allows one to access the individual packed vectors in their global 213f73e5cebSJed Brown representation. 214f73e5cebSJed Brown 215f73e5cebSJed Brown Collective on DMComposite 216f73e5cebSJed Brown 217f73e5cebSJed Brown Input Parameters: 218f73e5cebSJed Brown + dm - the packer object 219f73e5cebSJed Brown . pvec - packed vector 220f73e5cebSJed Brown . nwanted - number of vectors wanted 2210298fd71SBarry Smith - wanted - sorted array of vectors wanted, or NULL to get all vectors 222f73e5cebSJed Brown 223f73e5cebSJed Brown Output Parameters: 224f73e5cebSJed Brown . vecs - array of requested global vectors (must be allocated) 225f73e5cebSJed Brown 226f73e5cebSJed Brown Notes: Use DMCompositeRestoreAccessArray() to return the vectors when you no longer need them 227f73e5cebSJed Brown 228f73e5cebSJed Brown Level: advanced 229f73e5cebSJed Brown 230f73e5cebSJed Brown .seealso: DMCompositeGetAccess(), DMCompositeGetEntries(), DMCompositeScatter(), DMCompositeGather() 231f73e5cebSJed Brown @*/ 232f73e5cebSJed Brown PetscErrorCode DMCompositeGetAccessArray(DM dm,Vec pvec,PetscInt nwanted,const PetscInt *wanted,Vec *vecs) 233f73e5cebSJed Brown { 234f73e5cebSJed Brown PetscErrorCode ierr; 235f73e5cebSJed Brown struct DMCompositeLink *link; 236f73e5cebSJed Brown PetscInt i,wnum; 237f73e5cebSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 238f73e5cebSJed Brown 239f73e5cebSJed Brown PetscFunctionBegin; 240f73e5cebSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 241f73e5cebSJed Brown PetscValidHeaderSpecific(pvec,VEC_CLASSID,2); 242f73e5cebSJed Brown if (!com->setup) { 243f73e5cebSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 244f73e5cebSJed Brown } 245f73e5cebSJed Brown 246f73e5cebSJed Brown for (i=0,wnum=0,link=com->next; link && wnum<nwanted; i++,link=link->next) { 247f73e5cebSJed Brown if (!wanted || i == wanted[wnum]) { 248f73e5cebSJed Brown PetscScalar *array; 249f73e5cebSJed Brown Vec v; 250f73e5cebSJed Brown ierr = DMGetGlobalVector(link->dm,&v);CHKERRQ(ierr); 251f73e5cebSJed Brown ierr = VecGetArray(pvec,&array);CHKERRQ(ierr); 252f73e5cebSJed Brown ierr = VecPlaceArray(v,array+link->rstart);CHKERRQ(ierr); 253f73e5cebSJed Brown ierr = VecRestoreArray(pvec,&array);CHKERRQ(ierr); 254f73e5cebSJed Brown vecs[wnum++] = v; 255f73e5cebSJed Brown } 256f73e5cebSJed Brown } 257f73e5cebSJed Brown PetscFunctionReturn(0); 258f73e5cebSJed Brown } 259f73e5cebSJed Brown 260f73e5cebSJed Brown #undef __FUNCT__ 26147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess" 26247c6ae99SBarry Smith /*@C 263aa219208SBarry Smith DMCompositeRestoreAccess - Returns the vectors obtained with DMCompositeGetAccess() 26447c6ae99SBarry Smith representation. 26547c6ae99SBarry Smith 26647c6ae99SBarry Smith Collective on DMComposite 26747c6ae99SBarry Smith 2689ae5db72SJed Brown Input Parameters: 26947c6ae99SBarry Smith + dm - the packer object 27047c6ae99SBarry Smith . gvec - the global vector 2710298fd71SBarry Smith - Vec* ... - the individual parallel vectors, NULL for those that are not needed 27247c6ae99SBarry Smith 27347c6ae99SBarry Smith Level: advanced 27447c6ae99SBarry Smith 2759ae5db72SJed Brown .seealso DMCompositeAddDM(), DMCreateGlobalVector(), 2766eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeScatter(), 277aa219208SBarry Smith DMCompositeRestoreAccess(), DMCompositeGetAccess() 27847c6ae99SBarry Smith 27947c6ae99SBarry Smith @*/ 2807087cfbeSBarry Smith PetscErrorCode DMCompositeRestoreAccess(DM dm,Vec gvec,...) 28147c6ae99SBarry Smith { 28247c6ae99SBarry Smith va_list Argp; 28347c6ae99SBarry Smith PetscErrorCode ierr; 28447c6ae99SBarry Smith struct DMCompositeLink *next; 28547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 28647c6ae99SBarry Smith 28747c6ae99SBarry Smith PetscFunctionBegin; 28847c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 28947c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 29047c6ae99SBarry Smith next = com->next; 29147c6ae99SBarry Smith if (!com->setup) { 292d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 29347c6ae99SBarry Smith } 29447c6ae99SBarry Smith 29547c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 29647c6ae99SBarry Smith va_start(Argp,gvec); 29747c6ae99SBarry Smith while (next) { 29847c6ae99SBarry Smith Vec *vec; 29947c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 3009ae5db72SJed Brown if (vec) { 3019ae5db72SJed Brown ierr = VecResetArray(*vec);CHKERRQ(ierr); 3029ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,vec);CHKERRQ(ierr); 30347c6ae99SBarry Smith } 30447c6ae99SBarry Smith next = next->next; 30547c6ae99SBarry Smith } 30647c6ae99SBarry Smith va_end(Argp); 30747c6ae99SBarry Smith PetscFunctionReturn(0); 30847c6ae99SBarry Smith } 30947c6ae99SBarry Smith 31047c6ae99SBarry Smith #undef __FUNCT__ 311f73e5cebSJed Brown #define __FUNCT__ "DMCompositeRestoreAccessArray" 312f73e5cebSJed Brown /*@C 313f73e5cebSJed Brown DMCompositeRestoreAccessArray - Returns the vectors obtained with DMCompositeGetAccessArray() 314f73e5cebSJed Brown 315f73e5cebSJed Brown Collective on DMComposite 316f73e5cebSJed Brown 317f73e5cebSJed Brown Input Parameters: 318f73e5cebSJed Brown + dm - the packer object 319f73e5cebSJed Brown . pvec - packed vector 320f73e5cebSJed Brown . nwanted - number of vectors wanted 3210298fd71SBarry Smith . wanted - sorted array of vectors wanted, or NULL to get all vectors 322f73e5cebSJed Brown - vecs - array of global vectors to return 323f73e5cebSJed Brown 324f73e5cebSJed Brown Level: advanced 325f73e5cebSJed Brown 326f73e5cebSJed Brown .seealso: DMCompositeRestoreAccess(), DMCompositeRestoreEntries(), DMCompositeScatter(), DMCompositeGather() 327f73e5cebSJed Brown @*/ 328f73e5cebSJed Brown PetscErrorCode DMCompositeRestoreAccessArray(DM dm,Vec pvec,PetscInt nwanted,const PetscInt *wanted,Vec *vecs) 329f73e5cebSJed Brown { 330f73e5cebSJed Brown PetscErrorCode ierr; 331f73e5cebSJed Brown struct DMCompositeLink *link; 332f73e5cebSJed Brown PetscInt i,wnum; 333f73e5cebSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 334f73e5cebSJed Brown 335f73e5cebSJed Brown PetscFunctionBegin; 336f73e5cebSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 337f73e5cebSJed Brown PetscValidHeaderSpecific(pvec,VEC_CLASSID,2); 338f73e5cebSJed Brown if (!com->setup) { 339f73e5cebSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 340f73e5cebSJed Brown } 341f73e5cebSJed Brown 342f73e5cebSJed Brown for (i=0,wnum=0,link=com->next; link && wnum<nwanted; i++,link=link->next) { 343f73e5cebSJed Brown if (!wanted || i == wanted[wnum]) { 344f73e5cebSJed Brown ierr = VecResetArray(vecs[wnum]);CHKERRQ(ierr); 345f73e5cebSJed Brown ierr = DMRestoreGlobalVector(link->dm,&vecs[wnum]);CHKERRQ(ierr); 346f73e5cebSJed Brown wnum++; 347f73e5cebSJed Brown } 348f73e5cebSJed Brown } 349f73e5cebSJed Brown PetscFunctionReturn(0); 350f73e5cebSJed Brown } 351f73e5cebSJed Brown 352f73e5cebSJed Brown #undef __FUNCT__ 35347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter" 35447c6ae99SBarry Smith /*@C 35547c6ae99SBarry Smith DMCompositeScatter - Scatters from a global packed vector into its individual local vectors 35647c6ae99SBarry Smith 35747c6ae99SBarry Smith Collective on DMComposite 35847c6ae99SBarry Smith 3599ae5db72SJed Brown Input Parameters: 36047c6ae99SBarry Smith + dm - the packer object 36147c6ae99SBarry Smith . gvec - the global vector 3620298fd71SBarry Smith - Vec ... - the individual sequential vectors, NULL for those that are not needed 36347c6ae99SBarry Smith 36447c6ae99SBarry Smith Level: advanced 36547c6ae99SBarry Smith 3666f3c3dcfSJed Brown Notes: 3676f3c3dcfSJed Brown DMCompositeScatterArray() is a non-variadic alternative that is often more convenient for library callers and is 3686f3c3dcfSJed Brown accessible from Fortran. 3696f3c3dcfSJed Brown 3709ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 3716eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 37247c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 3736f3c3dcfSJed Brown DMCompositeScatterArray() 37447c6ae99SBarry Smith 37547c6ae99SBarry Smith @*/ 3767087cfbeSBarry Smith PetscErrorCode DMCompositeScatter(DM dm,Vec gvec,...) 37747c6ae99SBarry Smith { 37847c6ae99SBarry Smith va_list Argp; 37947c6ae99SBarry Smith PetscErrorCode ierr; 38047c6ae99SBarry Smith struct DMCompositeLink *next; 3818fd8f222SJed Brown PetscInt cnt; 38247c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 38347c6ae99SBarry Smith 38447c6ae99SBarry Smith PetscFunctionBegin; 38547c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 38647c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 38747c6ae99SBarry Smith if (!com->setup) { 388d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 38947c6ae99SBarry Smith } 39047c6ae99SBarry Smith 39147c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 39247c6ae99SBarry Smith va_start(Argp,gvec); 3938fd8f222SJed Brown for (cnt=3,next=com->next; next; cnt++,next=next->next) { 3949ae5db72SJed Brown Vec local; 3959ae5db72SJed Brown local = va_arg(Argp, Vec); 3969ae5db72SJed Brown if (local) { 3979ae5db72SJed Brown Vec global; 39847c6ae99SBarry Smith PetscScalar *array; 3999ae5db72SJed Brown PetscValidHeaderSpecific(local,VEC_CLASSID,cnt); 4009ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 4019ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 4029ae5db72SJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 4039ae5db72SJed Brown ierr = DMGlobalToLocalBegin(next->dm,global,INSERT_VALUES,local);CHKERRQ(ierr); 4049ae5db72SJed Brown ierr = DMGlobalToLocalEnd(next->dm,global,INSERT_VALUES,local);CHKERRQ(ierr); 4059ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 4069ae5db72SJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 4079ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 40847c6ae99SBarry Smith } 40947c6ae99SBarry Smith } 41047c6ae99SBarry Smith va_end(Argp); 41147c6ae99SBarry Smith PetscFunctionReturn(0); 41247c6ae99SBarry Smith } 41347c6ae99SBarry Smith 41447c6ae99SBarry Smith #undef __FUNCT__ 4156f3c3dcfSJed Brown #define __FUNCT__ "DMCompositeScatterArray" 4166f3c3dcfSJed Brown /*@ 4176f3c3dcfSJed Brown DMCompositeScatterArray - Scatters from a global packed vector into its individual local vectors 4186f3c3dcfSJed Brown 4196f3c3dcfSJed Brown Collective on DMComposite 4206f3c3dcfSJed Brown 4216f3c3dcfSJed Brown Input Parameters: 4226f3c3dcfSJed Brown + dm - the packer object 4236f3c3dcfSJed Brown . gvec - the global vector 4246f3c3dcfSJed Brown . lvecs - array of local vectors, NULL for any that are not needed 4256f3c3dcfSJed Brown 4266f3c3dcfSJed Brown Level: advanced 4276f3c3dcfSJed Brown 4286f3c3dcfSJed Brown Note: 4296f3c3dcfSJed Brown This is a non-variadic alternative to DMCompositeScatterArray() 4306f3c3dcfSJed Brown 4316f3c3dcfSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector() 4326f3c3dcfSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 4336f3c3dcfSJed Brown DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 4346f3c3dcfSJed Brown 4356f3c3dcfSJed Brown @*/ 4366f3c3dcfSJed Brown PetscErrorCode DMCompositeScatterArray(DM dm,Vec gvec,Vec *lvecs) 4376f3c3dcfSJed Brown { 4386f3c3dcfSJed Brown PetscErrorCode ierr; 4396f3c3dcfSJed Brown struct DMCompositeLink *next; 4406f3c3dcfSJed Brown PetscInt i; 4416f3c3dcfSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 4426f3c3dcfSJed Brown 4436f3c3dcfSJed Brown PetscFunctionBegin; 4446f3c3dcfSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 4456f3c3dcfSJed Brown PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 4466f3c3dcfSJed Brown if (!com->setup) { 4476f3c3dcfSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 4486f3c3dcfSJed Brown } 4496f3c3dcfSJed Brown 4506f3c3dcfSJed Brown /* loop over packed objects, handling one at at time */ 4516f3c3dcfSJed Brown for (i=0,next=com->next; next; next=next->next,i++) { 4526f3c3dcfSJed Brown if (lvecs[i]) { 4536f3c3dcfSJed Brown Vec global; 4546f3c3dcfSJed Brown PetscScalar *array; 4556f3c3dcfSJed Brown PetscValidHeaderSpecific(lvecs[i],VEC_CLASSID,3); 4566f3c3dcfSJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 4576f3c3dcfSJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 4586f3c3dcfSJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 4596f3c3dcfSJed Brown ierr = DMGlobalToLocalBegin(next->dm,global,INSERT_VALUES,lvecs[i]);CHKERRQ(ierr); 4606f3c3dcfSJed Brown ierr = DMGlobalToLocalEnd(next->dm,global,INSERT_VALUES,lvecs[i]);CHKERRQ(ierr); 4616f3c3dcfSJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 4626f3c3dcfSJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 4636f3c3dcfSJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 4646f3c3dcfSJed Brown } 4656f3c3dcfSJed Brown } 4666f3c3dcfSJed Brown PetscFunctionReturn(0); 4676f3c3dcfSJed Brown } 4686f3c3dcfSJed Brown 4696f3c3dcfSJed Brown #undef __FUNCT__ 47047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather" 47147c6ae99SBarry Smith /*@C 47247c6ae99SBarry Smith DMCompositeGather - Gathers into a global packed vector from its individual local vectors 47347c6ae99SBarry Smith 47447c6ae99SBarry Smith Collective on DMComposite 47547c6ae99SBarry Smith 47647c6ae99SBarry Smith Input Parameter: 47747c6ae99SBarry Smith + dm - the packer object 47847c6ae99SBarry Smith . gvec - the global vector 4790298fd71SBarry Smith - Vec ... - the individual sequential vectors, NULL for any that are not needed 48047c6ae99SBarry Smith 48147c6ae99SBarry Smith Level: advanced 48247c6ae99SBarry Smith 4839ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 4846eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 48547c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 48647c6ae99SBarry Smith 48747c6ae99SBarry Smith @*/ 4887087cfbeSBarry Smith PetscErrorCode DMCompositeGather(DM dm,Vec gvec,InsertMode imode,...) 48947c6ae99SBarry Smith { 49047c6ae99SBarry Smith va_list Argp; 49147c6ae99SBarry Smith PetscErrorCode ierr; 49247c6ae99SBarry Smith struct DMCompositeLink *next; 49347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 4948fd8f222SJed Brown PetscInt cnt; 49547c6ae99SBarry Smith 49647c6ae99SBarry Smith PetscFunctionBegin; 49747c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 49847c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 49947c6ae99SBarry Smith if (!com->setup) { 500d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 50147c6ae99SBarry Smith } 50247c6ae99SBarry Smith 50347c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 504df0c820aSJed Brown va_start(Argp,imode); 5058fd8f222SJed Brown for (cnt=3,next=com->next; next; cnt++,next=next->next) { 5069ae5db72SJed Brown Vec local; 5079ae5db72SJed Brown local = va_arg(Argp, Vec); 5089ae5db72SJed Brown if (local) { 50947c6ae99SBarry Smith PetscScalar *array; 5109ae5db72SJed Brown Vec global; 5119ae5db72SJed Brown PetscValidHeaderSpecific(local,VEC_CLASSID,cnt); 5129ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 5139ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 5149ae5db72SJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 5159ae5db72SJed Brown ierr = DMLocalToGlobalBegin(next->dm,local,imode,global);CHKERRQ(ierr); 5169ae5db72SJed Brown ierr = DMLocalToGlobalEnd(next->dm,local,imode,global);CHKERRQ(ierr); 5179ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 5189ae5db72SJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 5199ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 52047c6ae99SBarry Smith } 52147c6ae99SBarry Smith } 52247c6ae99SBarry Smith va_end(Argp); 52347c6ae99SBarry Smith PetscFunctionReturn(0); 52447c6ae99SBarry Smith } 52547c6ae99SBarry Smith 52647c6ae99SBarry Smith #undef __FUNCT__ 5276f3c3dcfSJed Brown #define __FUNCT__ "DMCompositeGatherArray" 5286f3c3dcfSJed Brown /*@ 5296f3c3dcfSJed Brown DMCompositeGatherArray - Gathers into a global packed vector from its individual local vectors 5306f3c3dcfSJed Brown 5316f3c3dcfSJed Brown Collective on DMComposite 5326f3c3dcfSJed Brown 5336f3c3dcfSJed Brown Input Parameter: 5346f3c3dcfSJed Brown + dm - the packer object 5356f3c3dcfSJed Brown . gvec - the global vector 5366f3c3dcfSJed Brown - lvecs - the individual sequential vectors, NULL for any that are not needed 5376f3c3dcfSJed Brown 5386f3c3dcfSJed Brown Level: advanced 5396f3c3dcfSJed Brown 5406f3c3dcfSJed Brown Notes: 5416f3c3dcfSJed Brown This is a non-variadic alternative to DMCompositeGather(). 5426f3c3dcfSJed Brown 5436f3c3dcfSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 5446f3c3dcfSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 5456f3c3dcfSJed Brown DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries(), 5466f3c3dcfSJed Brown @*/ 5476f3c3dcfSJed Brown PetscErrorCode DMCompositeGatherArray(DM dm,Vec gvec,InsertMode imode,Vec *lvecs) 5486f3c3dcfSJed Brown { 5496f3c3dcfSJed Brown PetscErrorCode ierr; 5506f3c3dcfSJed Brown struct DMCompositeLink *next; 5516f3c3dcfSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 5526f3c3dcfSJed Brown PetscInt i; 5536f3c3dcfSJed Brown 5546f3c3dcfSJed Brown PetscFunctionBegin; 5556f3c3dcfSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 5566f3c3dcfSJed Brown PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 5576f3c3dcfSJed Brown if (!com->setup) { 5586f3c3dcfSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 5596f3c3dcfSJed Brown } 5606f3c3dcfSJed Brown 5616f3c3dcfSJed Brown /* loop over packed objects, handling one at at time */ 5626f3c3dcfSJed Brown for (next=com->next,i=0; next; next=next->next,i++) { 5636f3c3dcfSJed Brown if (lvecs[i]) { 5646f3c3dcfSJed Brown PetscScalar *array; 5656f3c3dcfSJed Brown Vec global; 5666f3c3dcfSJed Brown PetscValidHeaderSpecific(lvecs[i],VEC_CLASSID,3); 5676f3c3dcfSJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 5686f3c3dcfSJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 5696f3c3dcfSJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 5706f3c3dcfSJed Brown ierr = DMLocalToGlobalBegin(next->dm,lvecs[i],imode,global);CHKERRQ(ierr); 5716f3c3dcfSJed Brown ierr = DMLocalToGlobalEnd(next->dm,lvecs[i],imode,global);CHKERRQ(ierr); 5726f3c3dcfSJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 5736f3c3dcfSJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 5746f3c3dcfSJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 5756f3c3dcfSJed Brown } 5766f3c3dcfSJed Brown } 5776f3c3dcfSJed Brown PetscFunctionReturn(0); 5786f3c3dcfSJed Brown } 5796f3c3dcfSJed Brown 5806f3c3dcfSJed Brown #undef __FUNCT__ 58147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeAddDM" 58247c6ae99SBarry Smith /*@C 583aa219208SBarry Smith DMCompositeAddDM - adds a DM vector to a DMComposite 58447c6ae99SBarry Smith 58547c6ae99SBarry Smith Collective on DMComposite 58647c6ae99SBarry Smith 58747c6ae99SBarry Smith Input Parameter: 58847c6ae99SBarry Smith + dm - the packer object 58947c6ae99SBarry Smith - dm - the DM object, if the DM is a da you will need to caste it with a (DM) 59047c6ae99SBarry Smith 59147c6ae99SBarry Smith Level: advanced 59247c6ae99SBarry Smith 5930c010503SBarry Smith .seealso DMDestroy(), DMCompositeGather(), DMCompositeAddDM(), DMCreateGlobalVector(), 5946eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 59547c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 59647c6ae99SBarry Smith 59747c6ae99SBarry Smith @*/ 5987087cfbeSBarry Smith PetscErrorCode DMCompositeAddDM(DM dmc,DM dm) 59947c6ae99SBarry Smith { 60047c6ae99SBarry Smith PetscErrorCode ierr; 60106ebdd98SJed Brown PetscInt n,nlocal; 60247c6ae99SBarry Smith struct DMCompositeLink *mine,*next; 60306ebdd98SJed Brown Vec global,local; 60447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dmc->data; 60547c6ae99SBarry Smith 60647c6ae99SBarry Smith PetscFunctionBegin; 60747c6ae99SBarry Smith PetscValidHeaderSpecific(dmc,DM_CLASSID,1); 60847c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,2); 60947c6ae99SBarry Smith next = com->next; 610ce94432eSBarry Smith if (com->setup) SETERRQ(PetscObjectComm((PetscObject)dmc),PETSC_ERR_ARG_WRONGSTATE,"Cannot add a DM once you have used the DMComposite"); 61147c6ae99SBarry Smith 61247c6ae99SBarry Smith /* create new link */ 61347c6ae99SBarry Smith ierr = PetscNew(struct DMCompositeLink,&mine);CHKERRQ(ierr); 61447c6ae99SBarry Smith ierr = PetscObjectReference((PetscObject)dm);CHKERRQ(ierr); 61547c6ae99SBarry Smith ierr = DMGetGlobalVector(dm,&global);CHKERRQ(ierr); 61647c6ae99SBarry Smith ierr = VecGetLocalSize(global,&n);CHKERRQ(ierr); 61747c6ae99SBarry Smith ierr = DMRestoreGlobalVector(dm,&global);CHKERRQ(ierr); 61806ebdd98SJed Brown ierr = DMGetLocalVector(dm,&local);CHKERRQ(ierr); 61906ebdd98SJed Brown ierr = VecGetSize(local,&nlocal);CHKERRQ(ierr); 62006ebdd98SJed Brown ierr = DMRestoreLocalVector(dm,&local);CHKERRQ(ierr); 6218865f1eaSKarl Rupp 62247c6ae99SBarry Smith mine->n = n; 62306ebdd98SJed Brown mine->nlocal = nlocal; 62447c6ae99SBarry Smith mine->dm = dm; 6250298fd71SBarry Smith mine->next = NULL; 62647c6ae99SBarry Smith com->n += n; 62747c6ae99SBarry Smith 62847c6ae99SBarry Smith /* add to end of list */ 6298865f1eaSKarl Rupp if (!next) com->next = mine; 6308865f1eaSKarl Rupp else { 63147c6ae99SBarry Smith while (next->next) next = next->next; 63247c6ae99SBarry Smith next->next = mine; 63347c6ae99SBarry Smith } 63447c6ae99SBarry Smith com->nDM++; 63547c6ae99SBarry Smith com->nmine++; 63647c6ae99SBarry Smith PetscFunctionReturn(0); 63747c6ae99SBarry Smith } 63847c6ae99SBarry Smith 6399804daf3SBarry Smith #include <petscdraw.h> 64026887b52SJed Brown PETSC_EXTERN PetscErrorCode VecView_MPI(Vec,PetscViewer); 64147c6ae99SBarry Smith #undef __FUNCT__ 64247c6ae99SBarry Smith #define __FUNCT__ "VecView_DMComposite" 6437087cfbeSBarry Smith PetscErrorCode VecView_DMComposite(Vec gvec,PetscViewer viewer) 64447c6ae99SBarry Smith { 64547c6ae99SBarry Smith DM dm; 64647c6ae99SBarry Smith PetscErrorCode ierr; 64747c6ae99SBarry Smith struct DMCompositeLink *next; 64847c6ae99SBarry Smith PetscBool isdraw; 649cef07954SSatish Balay DM_Composite *com; 65047c6ae99SBarry Smith 65147c6ae99SBarry Smith PetscFunctionBegin; 652c688c046SMatthew G Knepley ierr = VecGetDM(gvec, &dm);CHKERRQ(ierr); 653ce94432eSBarry Smith if (!dm) SETERRQ(PetscObjectComm((PetscObject)gvec),PETSC_ERR_ARG_WRONG,"Vector not generated from a DMComposite"); 65447c6ae99SBarry Smith com = (DM_Composite*)dm->data; 65547c6ae99SBarry Smith next = com->next; 65647c6ae99SBarry Smith 657251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr); 65847c6ae99SBarry Smith if (!isdraw) { 65947c6ae99SBarry Smith /* do I really want to call this? */ 66047c6ae99SBarry Smith ierr = VecView_MPI(gvec,viewer);CHKERRQ(ierr); 66147c6ae99SBarry Smith } else { 66247c6ae99SBarry Smith PetscInt cnt = 0; 66347c6ae99SBarry Smith 66447c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 66547c6ae99SBarry Smith while (next) { 66647c6ae99SBarry Smith Vec vec; 6679ae5db72SJed Brown PetscScalar *array; 66847c6ae99SBarry Smith PetscInt bs; 66947c6ae99SBarry Smith 6709ae5db72SJed Brown /* Should use VecGetSubVector() eventually, but would need to forward the DM for that to work */ 6719ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,&vec);CHKERRQ(ierr); 6729ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 6739ae5db72SJed Brown ierr = VecPlaceArray(vec,array+next->rstart);CHKERRQ(ierr); 6749ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 67547c6ae99SBarry Smith ierr = VecView(vec,viewer);CHKERRQ(ierr); 67647c6ae99SBarry Smith ierr = VecGetBlockSize(vec,&bs);CHKERRQ(ierr); 6779ae5db72SJed Brown ierr = VecResetArray(vec);CHKERRQ(ierr); 6789ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,&vec);CHKERRQ(ierr); 67947c6ae99SBarry Smith ierr = PetscViewerDrawBaseAdd(viewer,bs);CHKERRQ(ierr); 68047c6ae99SBarry Smith cnt += bs; 68147c6ae99SBarry Smith next = next->next; 68247c6ae99SBarry Smith } 68347c6ae99SBarry Smith ierr = PetscViewerDrawBaseAdd(viewer,-cnt);CHKERRQ(ierr); 68447c6ae99SBarry Smith } 68547c6ae99SBarry Smith PetscFunctionReturn(0); 68647c6ae99SBarry Smith } 68747c6ae99SBarry Smith 68847c6ae99SBarry Smith #undef __FUNCT__ 6890c010503SBarry Smith #define __FUNCT__ "DMCreateGlobalVector_Composite" 6907087cfbeSBarry Smith PetscErrorCode DMCreateGlobalVector_Composite(DM dm,Vec *gvec) 69147c6ae99SBarry Smith { 69247c6ae99SBarry Smith PetscErrorCode ierr; 69347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 69447c6ae99SBarry Smith 69547c6ae99SBarry Smith PetscFunctionBegin; 69647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 697d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 698ce94432eSBarry Smith ierr = VecCreateMPI(PetscObjectComm((PetscObject)dm),com->n,com->N,gvec);CHKERRQ(ierr); 699c688c046SMatthew G Knepley ierr = VecSetDM(*gvec, dm);CHKERRQ(ierr); 70047c6ae99SBarry Smith ierr = VecSetOperation(*gvec,VECOP_VIEW,(void (*)(void))VecView_DMComposite);CHKERRQ(ierr); 70147c6ae99SBarry Smith PetscFunctionReturn(0); 70247c6ae99SBarry Smith } 70347c6ae99SBarry Smith 70447c6ae99SBarry Smith #undef __FUNCT__ 7050c010503SBarry Smith #define __FUNCT__ "DMCreateLocalVector_Composite" 7067087cfbeSBarry Smith PetscErrorCode DMCreateLocalVector_Composite(DM dm,Vec *lvec) 70747c6ae99SBarry Smith { 70847c6ae99SBarry Smith PetscErrorCode ierr; 70947c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 71047c6ae99SBarry Smith 71147c6ae99SBarry Smith PetscFunctionBegin; 71247c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 71347c6ae99SBarry Smith if (!com->setup) { 714d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 71547c6ae99SBarry Smith } 716ce94432eSBarry Smith ierr = VecCreateSeq(PetscObjectComm((PetscObject)dm),com->nghost,lvec);CHKERRQ(ierr); 717c688c046SMatthew G Knepley ierr = VecSetDM(*lvec, dm);CHKERRQ(ierr); 71847c6ae99SBarry Smith PetscFunctionReturn(0); 71947c6ae99SBarry Smith } 72047c6ae99SBarry Smith 72147c6ae99SBarry Smith #undef __FUNCT__ 7226eb61c8cSJed Brown #define __FUNCT__ "DMCompositeGetISLocalToGlobalMappings" 72347c6ae99SBarry Smith /*@C 7249ae5db72SJed Brown DMCompositeGetISLocalToGlobalMappings - gets an ISLocalToGlobalMapping for each DM in the DMComposite, maps to the composite global space 72547c6ae99SBarry Smith 72606ebdd98SJed Brown Collective on DM 72747c6ae99SBarry Smith 72847c6ae99SBarry Smith Input Parameter: 72947c6ae99SBarry Smith . dm - the packer object 73047c6ae99SBarry Smith 73147c6ae99SBarry Smith Output Parameters: 7329ae5db72SJed Brown . ltogs - the individual mappings for each packed vector. Note that this includes 7339ae5db72SJed Brown all the ghost points that individual ghosted DMDA's may have. 73447c6ae99SBarry Smith 73547c6ae99SBarry Smith Level: advanced 73647c6ae99SBarry Smith 73747c6ae99SBarry Smith Notes: 7386eb61c8cSJed Brown Each entry of ltogs should be destroyed with ISLocalToGlobalMappingDestroy(), the ltogs array should be freed with PetscFree(). 73947c6ae99SBarry Smith 7409ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 74147c6ae99SBarry Smith DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(), 74247c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries() 74347c6ae99SBarry Smith 74447c6ae99SBarry Smith @*/ 7457087cfbeSBarry Smith PetscErrorCode DMCompositeGetISLocalToGlobalMappings(DM dm,ISLocalToGlobalMapping **ltogs) 74647c6ae99SBarry Smith { 74747c6ae99SBarry Smith PetscErrorCode ierr; 74847c6ae99SBarry Smith PetscInt i,*idx,n,cnt; 74947c6ae99SBarry Smith struct DMCompositeLink *next; 75047c6ae99SBarry Smith PetscMPIInt rank; 75147c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 75247c6ae99SBarry Smith 75347c6ae99SBarry Smith PetscFunctionBegin; 75447c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 755728e99d6SJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 756785e854fSJed Brown ierr = PetscMalloc1((com->nDM),ltogs);CHKERRQ(ierr); 75747c6ae99SBarry Smith next = com->next; 758ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 75947c6ae99SBarry Smith 76047c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 76147c6ae99SBarry Smith cnt = 0; 76247c6ae99SBarry Smith while (next) { 7636eb61c8cSJed Brown ISLocalToGlobalMapping ltog; 7646eb61c8cSJed Brown PetscMPIInt size; 76586994e45SJed Brown const PetscInt *suboff,*indices; 7666eb61c8cSJed Brown Vec global; 76747c6ae99SBarry Smith 7686eb61c8cSJed Brown /* Get sub-DM global indices for each local dof */ 7691411c6eeSJed Brown ierr = DMGetLocalToGlobalMapping(next->dm,<og);CHKERRQ(ierr); 7706eb61c8cSJed Brown ierr = ISLocalToGlobalMappingGetSize(ltog,&n);CHKERRQ(ierr); 77186994e45SJed Brown ierr = ISLocalToGlobalMappingGetIndices(ltog,&indices);CHKERRQ(ierr); 772785e854fSJed Brown ierr = PetscMalloc1(n,&idx);CHKERRQ(ierr); 77347c6ae99SBarry Smith 7746eb61c8cSJed Brown /* Get the offsets for the sub-DM global vector */ 7756eb61c8cSJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 7766eb61c8cSJed Brown ierr = VecGetOwnershipRanges(global,&suboff);CHKERRQ(ierr); 777ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)global),&size);CHKERRQ(ierr); 7786eb61c8cSJed Brown 7796eb61c8cSJed Brown /* Shift the sub-DM definition of the global space to the composite global space */ 7806eb61c8cSJed Brown for (i=0; i<n; i++) { 78186994e45SJed Brown PetscInt subi = indices[i],lo = 0,hi = size,t; 7826eb61c8cSJed Brown /* Binary search to find which rank owns subi */ 7836eb61c8cSJed Brown while (hi-lo > 1) { 7846eb61c8cSJed Brown t = lo + (hi-lo)/2; 7856eb61c8cSJed Brown if (suboff[t] > subi) hi = t; 7866eb61c8cSJed Brown else lo = t; 7876eb61c8cSJed Brown } 7886eb61c8cSJed Brown idx[i] = subi - suboff[lo] + next->grstarts[lo]; 7896eb61c8cSJed Brown } 79086994e45SJed Brown ierr = ISLocalToGlobalMappingRestoreIndices(ltog,&indices);CHKERRQ(ierr); 791ce94432eSBarry Smith ierr = ISLocalToGlobalMappingCreate(PetscObjectComm((PetscObject)dm),n,idx,PETSC_OWN_POINTER,&(*ltogs)[cnt]);CHKERRQ(ierr); 7926eb61c8cSJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 79347c6ae99SBarry Smith next = next->next; 79447c6ae99SBarry Smith cnt++; 79547c6ae99SBarry Smith } 79647c6ae99SBarry Smith PetscFunctionReturn(0); 79747c6ae99SBarry Smith } 79847c6ae99SBarry Smith 79947c6ae99SBarry Smith #undef __FUNCT__ 80087c85e80SJed Brown #define __FUNCT__ "DMCompositeGetLocalISs" 80187c85e80SJed Brown /*@C 8029ae5db72SJed Brown DMCompositeGetLocalISs - Gets index sets for each component of a composite local vector 80387c85e80SJed Brown 80487c85e80SJed Brown Not Collective 80587c85e80SJed Brown 80687c85e80SJed Brown Input Arguments: 80787c85e80SJed Brown . dm - composite DM 80887c85e80SJed Brown 80987c85e80SJed Brown Output Arguments: 81087c85e80SJed Brown . is - array of serial index sets for each each component of the DMComposite 81187c85e80SJed Brown 81287c85e80SJed Brown Level: intermediate 81387c85e80SJed Brown 81487c85e80SJed Brown Notes: 81587c85e80SJed Brown At present, a composite local vector does not normally exist. This function is used to provide index sets for 81687c85e80SJed Brown MatGetLocalSubMatrix(). In the future, the scatters for each entry in the DMComposite may be be merged into a single 8179ae5db72SJed Brown scatter to a composite local vector. The user should not typically need to know which is being done. 81887c85e80SJed Brown 81987c85e80SJed Brown To get the composite global indices at all local points (including ghosts), use DMCompositeGetISLocalToGlobalMappings(). 82087c85e80SJed Brown 82187c85e80SJed Brown To get index sets for pieces of the composite global vector, use DMCompositeGetGlobalISs(). 82287c85e80SJed Brown 82387c85e80SJed Brown Each returned IS should be destroyed with ISDestroy(), the array should be freed with PetscFree(). 82487c85e80SJed Brown 82587c85e80SJed Brown .seealso: DMCompositeGetGlobalISs(), DMCompositeGetISLocalToGlobalMappings(), MatGetLocalSubMatrix(), MatCreateLocalRef() 82687c85e80SJed Brown @*/ 8277087cfbeSBarry Smith PetscErrorCode DMCompositeGetLocalISs(DM dm,IS **is) 82887c85e80SJed Brown { 82987c85e80SJed Brown PetscErrorCode ierr; 83087c85e80SJed Brown DM_Composite *com = (DM_Composite*)dm->data; 83187c85e80SJed Brown struct DMCompositeLink *link; 83287c85e80SJed Brown PetscInt cnt,start; 83387c85e80SJed Brown 83487c85e80SJed Brown PetscFunctionBegin; 83587c85e80SJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 83687c85e80SJed Brown PetscValidPointer(is,2); 837785e854fSJed Brown ierr = PetscMalloc1(com->nmine,is);CHKERRQ(ierr); 83806ebdd98SJed Brown for (cnt=0,start=0,link=com->next; link; start+=link->nlocal,cnt++,link=link->next) { 839520db06cSJed Brown PetscInt bs; 8409ae5db72SJed Brown ierr = ISCreateStride(PETSC_COMM_SELF,link->nlocal,start,1,&(*is)[cnt]);CHKERRQ(ierr); 8411411c6eeSJed Brown ierr = DMGetBlockSize(link->dm,&bs);CHKERRQ(ierr); 842520db06cSJed Brown ierr = ISSetBlockSize((*is)[cnt],bs);CHKERRQ(ierr); 843520db06cSJed Brown } 84487c85e80SJed Brown PetscFunctionReturn(0); 84587c85e80SJed Brown } 84687c85e80SJed Brown 84787c85e80SJed Brown #undef __FUNCT__ 84847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetGlobalISs" 84947c6ae99SBarry Smith /*@C 85047c6ae99SBarry Smith DMCompositeGetGlobalISs - Gets the index sets for each composed object 85147c6ae99SBarry Smith 85247c6ae99SBarry Smith Collective on DMComposite 85347c6ae99SBarry Smith 85447c6ae99SBarry Smith Input Parameter: 85547c6ae99SBarry Smith . dm - the packer object 85647c6ae99SBarry Smith 85747c6ae99SBarry Smith Output Parameters: 85847c6ae99SBarry Smith . is - the array of index sets 85947c6ae99SBarry Smith 86047c6ae99SBarry Smith Level: advanced 86147c6ae99SBarry Smith 86247c6ae99SBarry Smith Notes: 86347c6ae99SBarry Smith The is entries should be destroyed with ISDestroy(), the is array should be freed with PetscFree() 86447c6ae99SBarry Smith 86547c6ae99SBarry Smith These could be used to extract a subset of vector entries for a "multi-physics" preconditioner 86647c6ae99SBarry Smith 8676eb61c8cSJed Brown Use DMCompositeGetLocalISs() for index sets in the packed local numbering, and 8686eb61c8cSJed Brown DMCompositeGetISLocalToGlobalMappings() for to map local sub-DM (including ghost) indices to packed global 8696eb61c8cSJed Brown indices. 87047c6ae99SBarry Smith 8719ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 87247c6ae99SBarry Smith DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(), 87347c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries() 87447c6ae99SBarry Smith 87547c6ae99SBarry Smith @*/ 8766eb61c8cSJed Brown 8777087cfbeSBarry Smith PetscErrorCode DMCompositeGetGlobalISs(DM dm,IS *is[]) 87847c6ae99SBarry Smith { 87947c6ae99SBarry Smith PetscErrorCode ierr; 88066bb578eSMark Adams PetscInt cnt = 0; 88147c6ae99SBarry Smith struct DMCompositeLink *next; 88247c6ae99SBarry Smith PetscMPIInt rank; 88347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 88447c6ae99SBarry Smith 88547c6ae99SBarry Smith PetscFunctionBegin; 88647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 887785e854fSJed Brown ierr = PetscMalloc1((com->nDM),is);CHKERRQ(ierr); 88847c6ae99SBarry Smith next = com->next; 889ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 89047c6ae99SBarry Smith 89147c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 89247c6ae99SBarry Smith while (next) { 89366bb578eSMark Adams ierr = ISCreateStride(PetscObjectComm((PetscObject)dm),next->n,next->grstart,1,&(*is)[cnt]);CHKERRQ(ierr); 89465c226d8SMatthew G. Knepley if (dm->fields) { 89565c226d8SMatthew G. Knepley MatNullSpace space; 89665c226d8SMatthew G. Knepley Mat pmat; 89765c226d8SMatthew G. Knepley 89865c226d8SMatthew G. Knepley if (cnt >= dm->numFields) continue; 89965c226d8SMatthew G. Knepley ierr = PetscObjectQuery(dm->fields[cnt], "nullspace", (PetscObject*) &space);CHKERRQ(ierr); 900aac2dd2dSMatthew G. Knepley if (space) {ierr = PetscObjectCompose((PetscObject) (*is)[cnt], "nullspace", (PetscObject) space);CHKERRQ(ierr);} 90165c226d8SMatthew G. Knepley ierr = PetscObjectQuery(dm->fields[cnt], "nearnullspace", (PetscObject*) &space);CHKERRQ(ierr); 902aac2dd2dSMatthew G. Knepley if (space) {ierr = PetscObjectCompose((PetscObject) (*is)[cnt], "nearnullspace", (PetscObject) space);CHKERRQ(ierr);} 90365c226d8SMatthew G. Knepley ierr = PetscObjectQuery(dm->fields[cnt], "pmat", (PetscObject*) &pmat);CHKERRQ(ierr); 904aac2dd2dSMatthew G. Knepley if (pmat) {ierr = PetscObjectCompose((PetscObject) (*is)[cnt], "pmat", (PetscObject) pmat);CHKERRQ(ierr);} 90565c226d8SMatthew G. Knepley } 90647c6ae99SBarry Smith cnt++; 90747c6ae99SBarry Smith next = next->next; 90847c6ae99SBarry Smith } 90947c6ae99SBarry Smith PetscFunctionReturn(0); 91047c6ae99SBarry Smith } 91147c6ae99SBarry Smith 9124d343eeaSMatthew G Knepley #undef __FUNCT__ 9134d343eeaSMatthew G Knepley #define __FUNCT__ "DMCreateFieldIS_Composite" 91421c9b008SJed Brown PetscErrorCode DMCreateFieldIS_Composite(DM dm, PetscInt *numFields,char ***fieldNames, IS **fields) 9154d343eeaSMatthew G Knepley { 9164d343eeaSMatthew G Knepley PetscInt nDM; 9174d343eeaSMatthew G Knepley DM *dms; 9184d343eeaSMatthew G Knepley PetscInt i; 9194d343eeaSMatthew G Knepley PetscErrorCode ierr; 9204d343eeaSMatthew G Knepley 9214d343eeaSMatthew G Knepley PetscFunctionBegin; 9224d343eeaSMatthew G Knepley ierr = DMCompositeGetNumberDM(dm, &nDM);CHKERRQ(ierr); 9238865f1eaSKarl Rupp if (numFields) *numFields = nDM; 9244d343eeaSMatthew G Knepley ierr = DMCompositeGetGlobalISs(dm, fields);CHKERRQ(ierr); 9254d343eeaSMatthew G Knepley if (fieldNames) { 926785e854fSJed Brown ierr = PetscMalloc1(nDM, &dms);CHKERRQ(ierr); 927785e854fSJed Brown ierr = PetscMalloc1(nDM, fieldNames);CHKERRQ(ierr); 9284d343eeaSMatthew G Knepley ierr = DMCompositeGetEntriesArray(dm, dms);CHKERRQ(ierr); 9294d343eeaSMatthew G Knepley for (i=0; i<nDM; i++) { 9304d343eeaSMatthew G Knepley char buf[256]; 9314d343eeaSMatthew G Knepley const char *splitname; 9324d343eeaSMatthew G Knepley 9334d343eeaSMatthew G Knepley /* Split naming precedence: object name, prefix, number */ 9344d343eeaSMatthew G Knepley splitname = ((PetscObject) dm)->name; 9354d343eeaSMatthew G Knepley if (!splitname) { 9364d343eeaSMatthew G Knepley ierr = PetscObjectGetOptionsPrefix((PetscObject)dms[i],&splitname);CHKERRQ(ierr); 9374d343eeaSMatthew G Knepley if (splitname) { 9384d343eeaSMatthew G Knepley size_t len; 9398caf3d72SBarry Smith ierr = PetscStrncpy(buf,splitname,sizeof(buf));CHKERRQ(ierr); 9408caf3d72SBarry Smith buf[sizeof(buf) - 1] = 0; 9414d343eeaSMatthew G Knepley ierr = PetscStrlen(buf,&len);CHKERRQ(ierr); 9424d343eeaSMatthew G Knepley if (buf[len-1] == '_') buf[len-1] = 0; /* Remove trailing underscore if it was used */ 9434d343eeaSMatthew G Knepley splitname = buf; 9444d343eeaSMatthew G Knepley } 9454d343eeaSMatthew G Knepley } 9464d343eeaSMatthew G Knepley if (!splitname) { 9478caf3d72SBarry Smith ierr = PetscSNPrintf(buf,sizeof(buf),"%D",i);CHKERRQ(ierr); 9484d343eeaSMatthew G Knepley splitname = buf; 9494d343eeaSMatthew G Knepley } 95021c9b008SJed Brown ierr = PetscStrallocpy(splitname,&(*fieldNames)[i]);CHKERRQ(ierr); 9514d343eeaSMatthew G Knepley } 9524d343eeaSMatthew G Knepley ierr = PetscFree(dms);CHKERRQ(ierr); 9534d343eeaSMatthew G Knepley } 9544d343eeaSMatthew G Knepley PetscFunctionReturn(0); 9554d343eeaSMatthew G Knepley } 9564d343eeaSMatthew G Knepley 957e7c4fc90SDmitry Karpeev /* 958e7c4fc90SDmitry Karpeev This could take over from DMCreateFieldIS(), as it is more general, 9590298fd71SBarry Smith making DMCreateFieldIS() a special case -- calling with dmlist == NULL; 960e7c4fc90SDmitry Karpeev At this point it's probably best to be less intrusive, however. 961e7c4fc90SDmitry Karpeev */ 962e7c4fc90SDmitry Karpeev #undef __FUNCT__ 96316621825SDmitry Karpeev #define __FUNCT__ "DMCreateFieldDecomposition_Composite" 96416621825SDmitry Karpeev PetscErrorCode DMCreateFieldDecomposition_Composite(DM dm, PetscInt *len,char ***namelist, IS **islist, DM **dmlist) 965e7c4fc90SDmitry Karpeev { 966e7c4fc90SDmitry Karpeev PetscInt nDM; 967e7c4fc90SDmitry Karpeev PetscInt i; 968e7c4fc90SDmitry Karpeev PetscErrorCode ierr; 969e7c4fc90SDmitry Karpeev 970e7c4fc90SDmitry Karpeev PetscFunctionBegin; 971e7c4fc90SDmitry Karpeev ierr = DMCreateFieldIS_Composite(dm, len, namelist, islist);CHKERRQ(ierr); 972e7c4fc90SDmitry Karpeev if (dmlist) { 973e7c4fc90SDmitry Karpeev ierr = DMCompositeGetNumberDM(dm, &nDM);CHKERRQ(ierr); 974785e854fSJed Brown ierr = PetscMalloc1(nDM, dmlist);CHKERRQ(ierr); 975e7c4fc90SDmitry Karpeev ierr = DMCompositeGetEntriesArray(dm, *dmlist);CHKERRQ(ierr); 976e7c4fc90SDmitry Karpeev for (i=0; i<nDM; i++) { 977e7c4fc90SDmitry Karpeev ierr = PetscObjectReference((PetscObject)((*dmlist)[i]));CHKERRQ(ierr); 978e7c4fc90SDmitry Karpeev } 979e7c4fc90SDmitry Karpeev } 980e7c4fc90SDmitry Karpeev PetscFunctionReturn(0); 981e7c4fc90SDmitry Karpeev } 982e7c4fc90SDmitry Karpeev 983e7c4fc90SDmitry Karpeev 984e7c4fc90SDmitry Karpeev 98547c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 98647c6ae99SBarry Smith #undef __FUNCT__ 98747c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors" 98847c6ae99SBarry Smith /*@C 9899ae5db72SJed Brown DMCompositeGetLocalVectors - Gets local vectors for each part of a DMComposite. 99047c6ae99SBarry Smith Use DMCompositeRestoreLocalVectors() to return them. 99147c6ae99SBarry Smith 99247c6ae99SBarry Smith Not Collective 99347c6ae99SBarry Smith 99447c6ae99SBarry Smith Input Parameter: 99547c6ae99SBarry Smith . dm - the packer object 99647c6ae99SBarry Smith 99747c6ae99SBarry Smith Output Parameter: 9989ae5db72SJed Brown . Vec ... - the individual sequential Vecs 99947c6ae99SBarry Smith 100047c6ae99SBarry Smith Level: advanced 100147c6ae99SBarry Smith 10029ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 10036eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 100447c6ae99SBarry Smith DMCompositeRestoreLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries() 100547c6ae99SBarry Smith 100647c6ae99SBarry Smith @*/ 10077087cfbeSBarry Smith PetscErrorCode DMCompositeGetLocalVectors(DM dm,...) 100847c6ae99SBarry Smith { 100947c6ae99SBarry Smith va_list Argp; 101047c6ae99SBarry Smith PetscErrorCode ierr; 101147c6ae99SBarry Smith struct DMCompositeLink *next; 101247c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 101347c6ae99SBarry Smith 101447c6ae99SBarry Smith PetscFunctionBegin; 101547c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 101647c6ae99SBarry Smith next = com->next; 101747c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 101847c6ae99SBarry Smith va_start(Argp,dm); 101947c6ae99SBarry Smith while (next) { 102047c6ae99SBarry Smith Vec *vec; 102147c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 102206930112SJed Brown if (vec) {ierr = DMGetLocalVector(next->dm,vec);CHKERRQ(ierr);} 102347c6ae99SBarry Smith next = next->next; 102447c6ae99SBarry Smith } 102547c6ae99SBarry Smith va_end(Argp); 102647c6ae99SBarry Smith PetscFunctionReturn(0); 102747c6ae99SBarry Smith } 102847c6ae99SBarry Smith 102947c6ae99SBarry Smith #undef __FUNCT__ 103047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors" 103147c6ae99SBarry Smith /*@C 10329ae5db72SJed Brown DMCompositeRestoreLocalVectors - Restores local vectors for each part of a DMComposite. 103347c6ae99SBarry Smith 103447c6ae99SBarry Smith Not Collective 103547c6ae99SBarry Smith 103647c6ae99SBarry Smith Input Parameter: 103747c6ae99SBarry Smith . dm - the packer object 103847c6ae99SBarry Smith 103947c6ae99SBarry Smith Output Parameter: 10409ae5db72SJed Brown . Vec ... - the individual sequential Vecs 104147c6ae99SBarry Smith 104247c6ae99SBarry Smith Level: advanced 104347c6ae99SBarry Smith 10449ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 10456eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 104647c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries() 104747c6ae99SBarry Smith 104847c6ae99SBarry Smith @*/ 10497087cfbeSBarry Smith PetscErrorCode DMCompositeRestoreLocalVectors(DM dm,...) 105047c6ae99SBarry Smith { 105147c6ae99SBarry Smith va_list Argp; 105247c6ae99SBarry Smith PetscErrorCode ierr; 105347c6ae99SBarry Smith struct DMCompositeLink *next; 105447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 105547c6ae99SBarry Smith 105647c6ae99SBarry Smith PetscFunctionBegin; 105747c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 105847c6ae99SBarry Smith next = com->next; 105947c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 106047c6ae99SBarry Smith va_start(Argp,dm); 106147c6ae99SBarry Smith while (next) { 106247c6ae99SBarry Smith Vec *vec; 106347c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 106406930112SJed Brown if (vec) {ierr = DMRestoreLocalVector(next->dm,vec);CHKERRQ(ierr);} 106547c6ae99SBarry Smith next = next->next; 106647c6ae99SBarry Smith } 106747c6ae99SBarry Smith va_end(Argp); 106847c6ae99SBarry Smith PetscFunctionReturn(0); 106947c6ae99SBarry Smith } 107047c6ae99SBarry Smith 107147c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 107247c6ae99SBarry Smith #undef __FUNCT__ 107347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries" 107447c6ae99SBarry Smith /*@C 10759ae5db72SJed Brown DMCompositeGetEntries - Gets the DM for each entry in a DMComposite. 107647c6ae99SBarry Smith 107747c6ae99SBarry Smith Not Collective 107847c6ae99SBarry Smith 107947c6ae99SBarry Smith Input Parameter: 108047c6ae99SBarry Smith . dm - the packer object 108147c6ae99SBarry Smith 108247c6ae99SBarry Smith Output Parameter: 10839ae5db72SJed Brown . DM ... - the individual entries (DMs) 108447c6ae99SBarry Smith 108547c6ae99SBarry Smith Level: advanced 108647c6ae99SBarry Smith 10872fa5ba8aSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), DMCompositeGetEntriesArray() 10886eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 108947c6ae99SBarry Smith DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(), DMCompositeScatter(), 109047c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors() 109147c6ae99SBarry Smith 109247c6ae99SBarry Smith @*/ 10937087cfbeSBarry Smith PetscErrorCode DMCompositeGetEntries(DM dm,...) 109447c6ae99SBarry Smith { 109547c6ae99SBarry Smith va_list Argp; 109647c6ae99SBarry Smith struct DMCompositeLink *next; 109747c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 109847c6ae99SBarry Smith 109947c6ae99SBarry Smith PetscFunctionBegin; 110047c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 110147c6ae99SBarry Smith next = com->next; 110247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 110347c6ae99SBarry Smith va_start(Argp,dm); 110447c6ae99SBarry Smith while (next) { 110547c6ae99SBarry Smith DM *dmn; 110647c6ae99SBarry Smith dmn = va_arg(Argp, DM*); 11079ae5db72SJed Brown if (dmn) *dmn = next->dm; 110847c6ae99SBarry Smith next = next->next; 110947c6ae99SBarry Smith } 111047c6ae99SBarry Smith va_end(Argp); 111147c6ae99SBarry Smith PetscFunctionReturn(0); 111247c6ae99SBarry Smith } 111347c6ae99SBarry Smith 111447c6ae99SBarry Smith #undef __FUNCT__ 11152fa5ba8aSJed Brown #define __FUNCT__ "DMCompositeGetEntriesArray" 1116dbab29e1SMark F. Adams /*@C 11172fa5ba8aSJed Brown DMCompositeGetEntriesArray - Gets the DM for each entry in a DMComposite. 11182fa5ba8aSJed Brown 11192fa5ba8aSJed Brown Not Collective 11202fa5ba8aSJed Brown 11212fa5ba8aSJed Brown Input Parameter: 11222fa5ba8aSJed Brown + dm - the packer object 11232fa5ba8aSJed Brown - dms - array of sufficient length (see DMCompositeGetNumberDM()), holds the DMs on output 11242fa5ba8aSJed Brown 11252fa5ba8aSJed Brown Level: advanced 11262fa5ba8aSJed Brown 11272fa5ba8aSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), DMCompositeGetEntries() 11282fa5ba8aSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 11292fa5ba8aSJed Brown DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(), DMCompositeScatter(), 11302fa5ba8aSJed Brown DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors() 11312fa5ba8aSJed Brown 11322fa5ba8aSJed Brown @*/ 11332fa5ba8aSJed Brown PetscErrorCode DMCompositeGetEntriesArray(DM dm,DM dms[]) 11342fa5ba8aSJed Brown { 11352fa5ba8aSJed Brown struct DMCompositeLink *next; 11362fa5ba8aSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 11372fa5ba8aSJed Brown PetscInt i; 11382fa5ba8aSJed Brown 11392fa5ba8aSJed Brown PetscFunctionBegin; 11402fa5ba8aSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 11412fa5ba8aSJed Brown /* loop over packed objects, handling one at at time */ 11422fa5ba8aSJed Brown for (next=com->next,i=0; next; next=next->next,i++) dms[i] = next->dm; 11432fa5ba8aSJed Brown PetscFunctionReturn(0); 11442fa5ba8aSJed Brown } 11452fa5ba8aSJed Brown 11462fa5ba8aSJed Brown #undef __FUNCT__ 11470c010503SBarry Smith #define __FUNCT__ "DMRefine_Composite" 11487087cfbeSBarry Smith PetscErrorCode DMRefine_Composite(DM dmi,MPI_Comm comm,DM *fine) 114947c6ae99SBarry Smith { 115047c6ae99SBarry Smith PetscErrorCode ierr; 115147c6ae99SBarry Smith struct DMCompositeLink *next; 115247c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dmi->data; 115347c6ae99SBarry Smith DM dm; 115447c6ae99SBarry Smith 115547c6ae99SBarry Smith PetscFunctionBegin; 115647c6ae99SBarry Smith PetscValidHeaderSpecific(dmi,DM_CLASSID,1); 1157ce94432eSBarry Smith if (comm == MPI_COMM_NULL) { 1158ce94432eSBarry Smith ierr = PetscObjectGetComm((PetscObject)dmi,&comm);CHKERRQ(ierr); 1159ce94432eSBarry Smith } 11602ce3a92bSJed Brown ierr = DMSetUp(dmi);CHKERRQ(ierr); 116147c6ae99SBarry Smith next = com->next; 116247c6ae99SBarry Smith ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr); 116347c6ae99SBarry Smith 116447c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 116547c6ae99SBarry Smith while (next) { 116647c6ae99SBarry Smith ierr = DMRefine(next->dm,comm,&dm);CHKERRQ(ierr); 116747c6ae99SBarry Smith ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr); 116847c6ae99SBarry Smith ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr); 116947c6ae99SBarry Smith next = next->next; 117047c6ae99SBarry Smith } 117147c6ae99SBarry Smith PetscFunctionReturn(0); 117247c6ae99SBarry Smith } 117347c6ae99SBarry Smith 117414354c39SJed Brown #undef __FUNCT__ 117514354c39SJed Brown #define __FUNCT__ "DMCoarsen_Composite" 117614354c39SJed Brown PetscErrorCode DMCoarsen_Composite(DM dmi,MPI_Comm comm,DM *fine) 117714354c39SJed Brown { 117814354c39SJed Brown PetscErrorCode ierr; 117914354c39SJed Brown struct DMCompositeLink *next; 118014354c39SJed Brown DM_Composite *com = (DM_Composite*)dmi->data; 118114354c39SJed Brown DM dm; 118214354c39SJed Brown 118314354c39SJed Brown PetscFunctionBegin; 118414354c39SJed Brown PetscValidHeaderSpecific(dmi,DM_CLASSID,1); 11852ce3a92bSJed Brown ierr = DMSetUp(dmi);CHKERRQ(ierr); 11862ee06e3bSJed Brown if (comm == MPI_COMM_NULL) { 118725296bd5SBarry Smith ierr = PetscObjectGetComm((PetscObject)dmi,&comm);CHKERRQ(ierr); 118825296bd5SBarry Smith } 118914354c39SJed Brown next = com->next; 119014354c39SJed Brown ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr); 119114354c39SJed Brown 119214354c39SJed Brown /* loop over packed objects, handling one at at time */ 119314354c39SJed Brown while (next) { 119414354c39SJed Brown ierr = DMCoarsen(next->dm,comm,&dm);CHKERRQ(ierr); 119514354c39SJed Brown ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr); 119614354c39SJed Brown ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr); 119714354c39SJed Brown next = next->next; 119814354c39SJed Brown } 119914354c39SJed Brown PetscFunctionReturn(0); 120014354c39SJed Brown } 120147c6ae99SBarry Smith 120247c6ae99SBarry Smith #undef __FUNCT__ 1203e727c939SJed Brown #define __FUNCT__ "DMCreateInterpolation_Composite" 1204e727c939SJed Brown PetscErrorCode DMCreateInterpolation_Composite(DM coarse,DM fine,Mat *A,Vec *v) 120547c6ae99SBarry Smith { 120647c6ae99SBarry Smith PetscErrorCode ierr; 12079ae5db72SJed Brown PetscInt m,n,M,N,nDM,i; 120847c6ae99SBarry Smith struct DMCompositeLink *nextc; 120947c6ae99SBarry Smith struct DMCompositeLink *nextf; 121025296bd5SBarry Smith Vec gcoarse,gfine,*vecs; 121147c6ae99SBarry Smith DM_Composite *comcoarse = (DM_Composite*)coarse->data; 121247c6ae99SBarry Smith DM_Composite *comfine = (DM_Composite*)fine->data; 12139ae5db72SJed Brown Mat *mats; 121447c6ae99SBarry Smith 121547c6ae99SBarry Smith PetscFunctionBegin; 121647c6ae99SBarry Smith PetscValidHeaderSpecific(coarse,DM_CLASSID,1); 121747c6ae99SBarry Smith PetscValidHeaderSpecific(fine,DM_CLASSID,2); 1218f692024eSJed Brown ierr = DMSetUp(coarse);CHKERRQ(ierr); 1219f692024eSJed Brown ierr = DMSetUp(fine);CHKERRQ(ierr); 122047c6ae99SBarry Smith /* use global vectors only for determining matrix layout */ 12219ae5db72SJed Brown ierr = DMGetGlobalVector(coarse,&gcoarse);CHKERRQ(ierr); 12229ae5db72SJed Brown ierr = DMGetGlobalVector(fine,&gfine);CHKERRQ(ierr); 122347c6ae99SBarry Smith ierr = VecGetLocalSize(gcoarse,&n);CHKERRQ(ierr); 122447c6ae99SBarry Smith ierr = VecGetLocalSize(gfine,&m);CHKERRQ(ierr); 122547c6ae99SBarry Smith ierr = VecGetSize(gcoarse,&N);CHKERRQ(ierr); 122647c6ae99SBarry Smith ierr = VecGetSize(gfine,&M);CHKERRQ(ierr); 12279ae5db72SJed Brown ierr = DMRestoreGlobalVector(coarse,&gcoarse);CHKERRQ(ierr); 12289ae5db72SJed Brown ierr = DMRestoreGlobalVector(fine,&gfine);CHKERRQ(ierr); 122947c6ae99SBarry Smith 12309ae5db72SJed Brown nDM = comfine->nDM; 1231ce94432eSBarry Smith if (nDM != comcoarse->nDM) SETERRQ2(PetscObjectComm((PetscObject)fine),PETSC_ERR_ARG_INCOMP,"Fine DMComposite has %D entries, but coarse has %D",nDM,comcoarse->nDM); 1232*1795a4d1SJed Brown ierr = PetscCalloc1(nDM*nDM,&mats);CHKERRQ(ierr); 123325296bd5SBarry Smith if (v) { 1234*1795a4d1SJed Brown ierr = PetscCalloc1(nDM,&vecs);CHKERRQ(ierr); 123525296bd5SBarry Smith } 123647c6ae99SBarry Smith 123747c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 12389ae5db72SJed Brown for (nextc=comcoarse->next,nextf=comfine->next,i=0; nextc; nextc=nextc->next,nextf=nextf->next,i++) { 123925296bd5SBarry Smith if (!v) { 12400298fd71SBarry Smith ierr = DMCreateInterpolation(nextc->dm,nextf->dm,&mats[i*nDM+i],NULL);CHKERRQ(ierr); 124125296bd5SBarry Smith } else { 124225296bd5SBarry Smith ierr = DMCreateInterpolation(nextc->dm,nextf->dm,&mats[i*nDM+i],&vecs[i]);CHKERRQ(ierr); 124325296bd5SBarry Smith } 124447c6ae99SBarry Smith } 1245ce94432eSBarry Smith ierr = MatCreateNest(PetscObjectComm((PetscObject)fine),nDM,NULL,nDM,NULL,mats,A);CHKERRQ(ierr); 124625296bd5SBarry Smith if (v) { 1247ce94432eSBarry Smith ierr = VecCreateNest(PetscObjectComm((PetscObject)fine),nDM,NULL,vecs,v);CHKERRQ(ierr); 124825296bd5SBarry Smith } 12499ae5db72SJed Brown for (i=0; i<nDM*nDM; i++) {ierr = MatDestroy(&mats[i]);CHKERRQ(ierr);} 12509ae5db72SJed Brown ierr = PetscFree(mats);CHKERRQ(ierr); 125125296bd5SBarry Smith if (v) { 125225296bd5SBarry Smith for (i=0; i<nDM; i++) {ierr = VecDestroy(&vecs[i]);CHKERRQ(ierr);} 125325296bd5SBarry Smith ierr = PetscFree(vecs);CHKERRQ(ierr); 125425296bd5SBarry Smith } 125547c6ae99SBarry Smith PetscFunctionReturn(0); 125647c6ae99SBarry Smith } 125747c6ae99SBarry Smith 125847c6ae99SBarry Smith #undef __FUNCT__ 1259184d77edSJed Brown #define __FUNCT__ "DMGetLocalToGlobalMapping_Composite" 1260184d77edSJed Brown static PetscErrorCode DMGetLocalToGlobalMapping_Composite(DM dm) 12611411c6eeSJed Brown { 12621411c6eeSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 12631411c6eeSJed Brown ISLocalToGlobalMapping *ltogs; 1264f7efa3c7SJed Brown PetscInt i; 12651411c6eeSJed Brown PetscErrorCode ierr; 12661411c6eeSJed Brown 12671411c6eeSJed Brown PetscFunctionBegin; 12681411c6eeSJed Brown /* Set the ISLocalToGlobalMapping on the new matrix */ 12691411c6eeSJed Brown ierr = DMCompositeGetISLocalToGlobalMappings(dm,<ogs);CHKERRQ(ierr); 1270ce94432eSBarry Smith ierr = ISLocalToGlobalMappingConcatenate(PetscObjectComm((PetscObject)dm),com->nDM,ltogs,&dm->ltogmap);CHKERRQ(ierr); 12719ae5db72SJed Brown for (i=0; i<com->nDM; i++) {ierr = ISLocalToGlobalMappingDestroy(<ogs[i]);CHKERRQ(ierr);} 12721411c6eeSJed Brown ierr = PetscFree(ltogs);CHKERRQ(ierr); 12731411c6eeSJed Brown PetscFunctionReturn(0); 12741411c6eeSJed Brown } 12751411c6eeSJed Brown 12761411c6eeSJed Brown 12771411c6eeSJed Brown #undef __FUNCT__ 1278e727c939SJed Brown #define __FUNCT__ "DMCreateColoring_Composite" 1279b412c318SBarry Smith PetscErrorCode DMCreateColoring_Composite(DM dm,ISColoringType ctype,ISColoring *coloring) 128047c6ae99SBarry Smith { 128147c6ae99SBarry Smith PetscErrorCode ierr; 128247c6ae99SBarry Smith PetscInt n,i,cnt; 128347c6ae99SBarry Smith ISColoringValue *colors; 128447c6ae99SBarry Smith PetscBool dense = PETSC_FALSE; 128547c6ae99SBarry Smith ISColoringValue maxcol = 0; 128647c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 128747c6ae99SBarry Smith 128847c6ae99SBarry Smith PetscFunctionBegin; 128947c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 1290ce94432eSBarry Smith if (ctype == IS_COLORING_GHOSTED) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_SUP,"Only global coloring supported"); 1291e3247f34SBarry Smith else if (ctype == IS_COLORING_GLOBAL) { 129247c6ae99SBarry Smith n = com->n; 1293ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_ARG_OUTOFRANGE,"Unknown ISColoringType"); 1294785e854fSJed Brown ierr = PetscMalloc1(n,&colors);CHKERRQ(ierr); /* freed in ISColoringDestroy() */ 129547c6ae99SBarry Smith 12960298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-dmcomposite_dense_jacobian",&dense,NULL);CHKERRQ(ierr); 129747c6ae99SBarry Smith if (dense) { 129847c6ae99SBarry Smith for (i=0; i<n; i++) { 129947c6ae99SBarry Smith colors[i] = (ISColoringValue)(com->rstart + i); 130047c6ae99SBarry Smith } 130147c6ae99SBarry Smith maxcol = com->N; 130247c6ae99SBarry Smith } else { 130347c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 130447c6ae99SBarry Smith PetscMPIInt rank; 130547c6ae99SBarry Smith 1306ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 130747c6ae99SBarry Smith cnt = 0; 130847c6ae99SBarry Smith while (next) { 130947c6ae99SBarry Smith ISColoring lcoloring; 131047c6ae99SBarry Smith 1311b412c318SBarry Smith ierr = DMCreateColoring(next->dm,IS_COLORING_GLOBAL,&lcoloring);CHKERRQ(ierr); 131247c6ae99SBarry Smith for (i=0; i<lcoloring->N; i++) { 131347c6ae99SBarry Smith colors[cnt++] = maxcol + lcoloring->colors[i]; 131447c6ae99SBarry Smith } 131547c6ae99SBarry Smith maxcol += lcoloring->n; 1316fcfd50ebSBarry Smith ierr = ISColoringDestroy(&lcoloring);CHKERRQ(ierr); 131747c6ae99SBarry Smith next = next->next; 131847c6ae99SBarry Smith } 131947c6ae99SBarry Smith } 1320ce94432eSBarry Smith ierr = ISColoringCreate(PetscObjectComm((PetscObject)dm),maxcol,n,colors,coloring);CHKERRQ(ierr); 132147c6ae99SBarry Smith PetscFunctionReturn(0); 132247c6ae99SBarry Smith } 132347c6ae99SBarry Smith 132447c6ae99SBarry Smith #undef __FUNCT__ 13250c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalBegin_Composite" 13267087cfbeSBarry Smith PetscErrorCode DMGlobalToLocalBegin_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec) 132747c6ae99SBarry Smith { 132847c6ae99SBarry Smith PetscErrorCode ierr; 132947c6ae99SBarry Smith struct DMCompositeLink *next; 133047c6ae99SBarry Smith PetscInt cnt = 3; 133147c6ae99SBarry Smith PetscMPIInt rank; 133247c6ae99SBarry Smith PetscScalar *garray,*larray; 133347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 133447c6ae99SBarry Smith 133547c6ae99SBarry Smith PetscFunctionBegin; 133647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 133747c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 133847c6ae99SBarry Smith next = com->next; 133947c6ae99SBarry Smith if (!com->setup) { 1340d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 134147c6ae99SBarry Smith } 1342ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 134347c6ae99SBarry Smith ierr = VecGetArray(gvec,&garray);CHKERRQ(ierr); 134447c6ae99SBarry Smith ierr = VecGetArray(lvec,&larray);CHKERRQ(ierr); 134547c6ae99SBarry Smith 134647c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 134747c6ae99SBarry Smith while (next) { 134847c6ae99SBarry Smith Vec local,global; 134947c6ae99SBarry Smith PetscInt N; 135047c6ae99SBarry Smith 135147c6ae99SBarry Smith ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 135247c6ae99SBarry Smith ierr = VecGetLocalSize(global,&N);CHKERRQ(ierr); 135347c6ae99SBarry Smith ierr = VecPlaceArray(global,garray);CHKERRQ(ierr); 135447c6ae99SBarry Smith ierr = DMGetLocalVector(next->dm,&local);CHKERRQ(ierr); 135547c6ae99SBarry Smith ierr = VecPlaceArray(local,larray);CHKERRQ(ierr); 135647c6ae99SBarry Smith ierr = DMGlobalToLocalBegin(next->dm,global,mode,local);CHKERRQ(ierr); 135747c6ae99SBarry Smith ierr = DMGlobalToLocalEnd(next->dm,global,mode,local);CHKERRQ(ierr); 135847c6ae99SBarry Smith ierr = VecResetArray(global);CHKERRQ(ierr); 135947c6ae99SBarry Smith ierr = VecResetArray(local);CHKERRQ(ierr); 136047c6ae99SBarry Smith ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 136147c6ae99SBarry Smith ierr = DMRestoreGlobalVector(next->dm,&local);CHKERRQ(ierr); 136247c6ae99SBarry Smith cnt++; 136306ebdd98SJed Brown larray += next->nlocal; 136447c6ae99SBarry Smith next = next->next; 136547c6ae99SBarry Smith } 136647c6ae99SBarry Smith 13670298fd71SBarry Smith ierr = VecRestoreArray(gvec,NULL);CHKERRQ(ierr); 13680298fd71SBarry Smith ierr = VecRestoreArray(lvec,NULL);CHKERRQ(ierr); 136947c6ae99SBarry Smith PetscFunctionReturn(0); 137047c6ae99SBarry Smith } 137147c6ae99SBarry Smith 137247c6ae99SBarry Smith #undef __FUNCT__ 13730c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalEnd_Composite" 13747087cfbeSBarry Smith PetscErrorCode DMGlobalToLocalEnd_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec) 13750c010503SBarry Smith { 13760c010503SBarry Smith PetscFunctionBegin; 13770c010503SBarry Smith PetscFunctionReturn(0); 13780c010503SBarry Smith } 137947c6ae99SBarry Smith 13806ae3a549SBarry Smith /*MC 13816ae3a549SBarry Smith DMCOMPOSITE = "composite" - A DM object that is used to manage data for a collection of DMs 13826ae3a549SBarry Smith 13836ae3a549SBarry Smith 13846ae3a549SBarry Smith 13856ae3a549SBarry Smith Level: intermediate 13866ae3a549SBarry Smith 13876ae3a549SBarry Smith .seealso: DMType, DMCOMPOSITE, DMDACreate(), DMCreate(), DMSetType(), DMCompositeCreate() 13886ae3a549SBarry Smith M*/ 13896ae3a549SBarry Smith 13906ae3a549SBarry Smith 1391a4121054SBarry Smith #undef __FUNCT__ 1392a4121054SBarry Smith #define __FUNCT__ "DMCreate_Composite" 13938cc058d9SJed Brown PETSC_EXTERN PetscErrorCode DMCreate_Composite(DM p) 1394a4121054SBarry Smith { 1395a4121054SBarry Smith PetscErrorCode ierr; 1396a4121054SBarry Smith DM_Composite *com; 1397a4121054SBarry Smith 1398a4121054SBarry Smith PetscFunctionBegin; 1399a4121054SBarry Smith ierr = PetscNewLog(p,DM_Composite,&com);CHKERRQ(ierr); 1400a4121054SBarry Smith p->data = com; 1401a4121054SBarry Smith ierr = PetscObjectChangeTypeName((PetscObject)p,"DMComposite");CHKERRQ(ierr); 1402a4121054SBarry Smith com->n = 0; 14030298fd71SBarry Smith com->next = NULL; 1404a4121054SBarry Smith com->nDM = 0; 1405a4121054SBarry Smith 1406a4121054SBarry Smith p->ops->createglobalvector = DMCreateGlobalVector_Composite; 1407a4121054SBarry Smith p->ops->createlocalvector = DMCreateLocalVector_Composite; 1408184d77edSJed Brown p->ops->getlocaltoglobalmapping = DMGetLocalToGlobalMapping_Composite; 1409184d77edSJed Brown p->ops->getlocaltoglobalmappingblock = 0; 14104d343eeaSMatthew G Knepley p->ops->createfieldis = DMCreateFieldIS_Composite; 141116621825SDmitry Karpeev p->ops->createfielddecomposition = DMCreateFieldDecomposition_Composite; 1412a4121054SBarry Smith p->ops->refine = DMRefine_Composite; 141314354c39SJed Brown p->ops->coarsen = DMCoarsen_Composite; 141425296bd5SBarry Smith p->ops->createinterpolation = DMCreateInterpolation_Composite; 141525296bd5SBarry Smith p->ops->creatematrix = DMCreateMatrix_Composite; 1416e727c939SJed Brown p->ops->getcoloring = DMCreateColoring_Composite; 1417a4121054SBarry Smith p->ops->globaltolocalbegin = DMGlobalToLocalBegin_Composite; 1418a4121054SBarry Smith p->ops->globaltolocalend = DMGlobalToLocalEnd_Composite; 1419a4121054SBarry Smith p->ops->destroy = DMDestroy_Composite; 1420a4121054SBarry Smith p->ops->view = DMView_Composite; 1421a4121054SBarry Smith p->ops->setup = DMSetUp_Composite; 1422a4121054SBarry Smith PetscFunctionReturn(0); 1423a4121054SBarry Smith } 1424a4121054SBarry Smith 14250c010503SBarry Smith #undef __FUNCT__ 14260c010503SBarry Smith #define __FUNCT__ "DMCompositeCreate" 14270c010503SBarry Smith /*@C 14280c010503SBarry Smith DMCompositeCreate - Creates a vector packer, used to generate "composite" 14290c010503SBarry Smith vectors made up of several subvectors. 14300c010503SBarry Smith 14310c010503SBarry Smith Collective on MPI_Comm 143247c6ae99SBarry Smith 143347c6ae99SBarry Smith Input Parameter: 14340c010503SBarry Smith . comm - the processors that will share the global vector 14350c010503SBarry Smith 14360c010503SBarry Smith Output Parameters: 14370c010503SBarry Smith . packer - the packer object 143847c6ae99SBarry Smith 143947c6ae99SBarry Smith Level: advanced 144047c6ae99SBarry Smith 14419ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCompositeScatter(), 14426eb61c8cSJed Brown DMCompositeGather(), DMCreateGlobalVector(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess() 144347c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 144447c6ae99SBarry Smith 144547c6ae99SBarry Smith @*/ 14467087cfbeSBarry Smith PetscErrorCode DMCompositeCreate(MPI_Comm comm,DM *packer) 144747c6ae99SBarry Smith { 14480c010503SBarry Smith PetscErrorCode ierr; 14490c010503SBarry Smith 145047c6ae99SBarry Smith PetscFunctionBegin; 14510c010503SBarry Smith PetscValidPointer(packer,2); 1452a4121054SBarry Smith ierr = DMCreate(comm,packer);CHKERRQ(ierr); 1453a4121054SBarry Smith ierr = DMSetType(*packer,DMCOMPOSITE);CHKERRQ(ierr); 145447c6ae99SBarry Smith PetscFunctionReturn(0); 145547c6ae99SBarry Smith } 1456