147c6ae99SBarry Smith 23c48a1e8SJed Brown #include "packimpl.h" /*I "petscdmcomposite.h" I*/ 347c6ae99SBarry Smith 447c6ae99SBarry Smith #undef __FUNCT__ 547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeSetCoupling" 647c6ae99SBarry Smith /*@C 747c6ae99SBarry Smith DMCompositeSetCoupling - Sets user provided routines that compute the coupling between the 8aa219208SBarry Smith seperate components (DMDA's and arrays) in a DMto build the correct matrix nonzero structure. 947c6ae99SBarry Smith 1047c6ae99SBarry Smith 1147c6ae99SBarry Smith Logically Collective on MPI_Comm 1247c6ae99SBarry Smith 1347c6ae99SBarry Smith Input Parameter: 1447c6ae99SBarry Smith + dm - the composite object 1547c6ae99SBarry Smith - formcouplelocations - routine to set the nonzero locations in the matrix 1647c6ae99SBarry Smith 1747c6ae99SBarry Smith Level: advanced 1847c6ae99SBarry Smith 1947c6ae99SBarry Smith Notes: See DMCompositeSetContext() and DMCompositeGetContext() for how to get user information into 2047c6ae99SBarry Smith this routine 2147c6ae99SBarry Smith 2247c6ae99SBarry Smith @*/ 237087cfbeSBarry Smith PetscErrorCode DMCompositeSetCoupling(DM dm,PetscErrorCode (*FormCoupleLocations)(DM,Mat,PetscInt*,PetscInt*,PetscInt,PetscInt,PetscInt,PetscInt)) 2447c6ae99SBarry Smith { 2547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 2647c6ae99SBarry Smith 2747c6ae99SBarry Smith PetscFunctionBegin; 2847c6ae99SBarry Smith com->FormCoupleLocations = FormCoupleLocations; 2947c6ae99SBarry Smith PetscFunctionReturn(0); 3047c6ae99SBarry Smith } 3147c6ae99SBarry Smith 3247c6ae99SBarry Smith #undef __FUNCT__ 3347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeSetContext" 3447c6ae99SBarry Smith /*@ 3547c6ae99SBarry Smith DMCompositeSetContext - Allows user to stash data they may need within the form coupling routine they 3647c6ae99SBarry Smith set with DMCompositeSetCoupling() 3747c6ae99SBarry Smith 3847c6ae99SBarry Smith 3947c6ae99SBarry Smith Not Collective 4047c6ae99SBarry Smith 4147c6ae99SBarry Smith Input Parameter: 4247c6ae99SBarry Smith + dm - the composite object 4347c6ae99SBarry Smith - ctx - the user supplied context 4447c6ae99SBarry Smith 4547c6ae99SBarry Smith Level: advanced 4647c6ae99SBarry Smith 4747c6ae99SBarry Smith Notes: Use DMCompositeGetContext() to retrieve the context when needed. 4847c6ae99SBarry Smith 4947c6ae99SBarry Smith @*/ 507087cfbeSBarry Smith PetscErrorCode DMCompositeSetContext(DM dm,void *ctx) 5147c6ae99SBarry Smith { 5247c6ae99SBarry Smith PetscFunctionBegin; 5347c6ae99SBarry Smith dm->ctx = ctx; 5447c6ae99SBarry Smith PetscFunctionReturn(0); 5547c6ae99SBarry Smith } 5647c6ae99SBarry Smith 5747c6ae99SBarry Smith #undef __FUNCT__ 5847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetContext" 5947c6ae99SBarry Smith /*@ 6047c6ae99SBarry Smith DMCompositeGetContext - Access the context set with DMCompositeSetContext() 6147c6ae99SBarry Smith 6247c6ae99SBarry Smith 6347c6ae99SBarry Smith Not Collective 6447c6ae99SBarry Smith 6547c6ae99SBarry Smith Input Parameter: 6647c6ae99SBarry Smith . dm - the composite object 6747c6ae99SBarry Smith 6847c6ae99SBarry Smith Output Parameter: 6947c6ae99SBarry Smith . ctx - the user supplied context 7047c6ae99SBarry Smith 7147c6ae99SBarry Smith Level: advanced 7247c6ae99SBarry Smith 7347c6ae99SBarry Smith Notes: Use DMCompositeGetContext() to retrieve the context when needed. 7447c6ae99SBarry Smith 7547c6ae99SBarry Smith @*/ 767087cfbeSBarry Smith PetscErrorCode DMCompositeGetContext(DM dm,void **ctx) 7747c6ae99SBarry Smith { 7847c6ae99SBarry Smith PetscFunctionBegin; 7947c6ae99SBarry Smith *ctx = dm->ctx; 8047c6ae99SBarry Smith PetscFunctionReturn(0); 8147c6ae99SBarry Smith } 8247c6ae99SBarry Smith 8347c6ae99SBarry Smith #undef __FUNCT__ 840c010503SBarry Smith #define __FUNCT__ "DMDestroy_Composite" 856bf464f9SBarry Smith PetscErrorCode DMDestroy_Composite(DM dm) 8647c6ae99SBarry Smith { 8747c6ae99SBarry Smith PetscErrorCode ierr; 8847c6ae99SBarry Smith struct DMCompositeLink *next, *prev; 8947c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 9047c6ae99SBarry Smith 9147c6ae99SBarry Smith PetscFunctionBegin; 9247c6ae99SBarry Smith next = com->next; 9347c6ae99SBarry Smith while (next) { 9447c6ae99SBarry Smith prev = next; 9547c6ae99SBarry Smith next = next->next; 9647c6ae99SBarry Smith if (prev->type == DMCOMPOSITE_DM) { 97fcfd50ebSBarry Smith ierr = DMDestroy(&prev->dm);CHKERRQ(ierr); 9847c6ae99SBarry Smith } 9947c6ae99SBarry Smith ierr = PetscFree(prev->grstarts);CHKERRQ(ierr); 10047c6ae99SBarry Smith ierr = PetscFree(prev);CHKERRQ(ierr); 10147c6ae99SBarry Smith } 10247c6ae99SBarry Smith PetscFunctionReturn(0); 10347c6ae99SBarry Smith } 10447c6ae99SBarry Smith 10547c6ae99SBarry Smith #undef __FUNCT__ 1060c010503SBarry Smith #define __FUNCT__ "DMView_Composite" 1077087cfbeSBarry Smith PetscErrorCode DMView_Composite(DM dm,PetscViewer v) 10847c6ae99SBarry Smith { 10947c6ae99SBarry Smith PetscErrorCode ierr; 11047c6ae99SBarry Smith PetscBool iascii; 11147c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 11247c6ae99SBarry Smith 11347c6ae99SBarry Smith PetscFunctionBegin; 11447c6ae99SBarry Smith ierr = PetscTypeCompare((PetscObject)v,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 11547c6ae99SBarry Smith if (iascii) { 11647c6ae99SBarry Smith struct DMCompositeLink *lnk = com->next; 11747c6ae99SBarry Smith PetscInt i; 11847c6ae99SBarry Smith 11947c6ae99SBarry Smith ierr = PetscViewerASCIIPrintf(v,"DM (%s)\n",((PetscObject)dm)->prefix?((PetscObject)dm)->prefix:"no prefix");CHKERRQ(ierr); 12047c6ae99SBarry Smith ierr = PetscViewerASCIIPrintf(v," contains %d DMs and %d redundant arrays\n",com->nDM,com->nredundant);CHKERRQ(ierr); 12147c6ae99SBarry Smith ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr); 12247c6ae99SBarry Smith for (i=0; lnk; lnk=lnk->next,i++) { 12347c6ae99SBarry Smith if (lnk->dm) { 12447c6ae99SBarry Smith ierr = PetscViewerASCIIPrintf(v,"Link %d: DM of type %s\n",i,((PetscObject)lnk->dm)->type_name);CHKERRQ(ierr); 12547c6ae99SBarry Smith ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr); 12647c6ae99SBarry Smith ierr = DMView(lnk->dm,v);CHKERRQ(ierr); 12747c6ae99SBarry Smith ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr); 12847c6ae99SBarry Smith } else { 12906ebdd98SJed Brown ierr = PetscViewerASCIIPrintf(v,"Link %d: Redundant array of size %d owned by rank %d\n",i,lnk->nlocal,lnk->rank);CHKERRQ(ierr); 13047c6ae99SBarry Smith } 13147c6ae99SBarry Smith } 13247c6ae99SBarry Smith ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr); 13347c6ae99SBarry Smith } 13447c6ae99SBarry Smith PetscFunctionReturn(0); 13547c6ae99SBarry Smith } 13647c6ae99SBarry Smith 13747c6ae99SBarry Smith /* --------------------------------------------------------------------------------------*/ 13847c6ae99SBarry Smith #undef __FUNCT__ 139d7bf68aeSBarry Smith #define __FUNCT__ "DMSetUp_Composite" 1407087cfbeSBarry Smith PetscErrorCode DMSetUp_Composite(DM dm) 14147c6ae99SBarry Smith { 14247c6ae99SBarry Smith PetscErrorCode ierr; 14347c6ae99SBarry Smith PetscInt nprev = 0; 14447c6ae99SBarry Smith PetscMPIInt rank,size; 14547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 14647c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 14747c6ae99SBarry Smith PetscLayout map; 14847c6ae99SBarry Smith 14947c6ae99SBarry Smith PetscFunctionBegin; 15047c6ae99SBarry Smith if (com->setup) SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_ARG_WRONGSTATE,"Packer has already been setup"); 15147c6ae99SBarry Smith ierr = PetscLayoutCreate(((PetscObject)dm)->comm,&map);CHKERRQ(ierr); 15247c6ae99SBarry Smith ierr = PetscLayoutSetLocalSize(map,com->n);CHKERRQ(ierr); 15347c6ae99SBarry Smith ierr = PetscLayoutSetSize(map,PETSC_DETERMINE);CHKERRQ(ierr); 15447c6ae99SBarry Smith ierr = PetscLayoutSetBlockSize(map,1);CHKERRQ(ierr); 15547c6ae99SBarry Smith ierr = PetscLayoutSetUp(map);CHKERRQ(ierr); 15647c6ae99SBarry Smith ierr = PetscLayoutGetSize(map,&com->N);CHKERRQ(ierr); 15747c6ae99SBarry Smith ierr = PetscLayoutGetRange(map,&com->rstart,PETSC_NULL);CHKERRQ(ierr); 158fcfd50ebSBarry Smith ierr = PetscLayoutDestroy(&map);CHKERRQ(ierr); 15947c6ae99SBarry Smith 16047c6ae99SBarry Smith /* now set the rstart for each linked array/vector */ 16147c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 16247c6ae99SBarry Smith ierr = MPI_Comm_size(((PetscObject)dm)->comm,&size);CHKERRQ(ierr); 16347c6ae99SBarry Smith while (next) { 16447c6ae99SBarry Smith next->rstart = nprev; 16506ebdd98SJed Brown nprev += next->n; 16647c6ae99SBarry Smith next->grstart = com->rstart + next->rstart; 16747c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 16847c6ae99SBarry Smith ierr = MPI_Bcast(&next->grstart,1,MPIU_INT,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 16947c6ae99SBarry Smith } else { 17047c6ae99SBarry Smith ierr = PetscMalloc(size*sizeof(PetscInt),&next->grstarts);CHKERRQ(ierr); 17147c6ae99SBarry Smith ierr = MPI_Allgather(&next->grstart,1,MPIU_INT,next->grstarts,1,MPIU_INT,((PetscObject)dm)->comm);CHKERRQ(ierr); 17247c6ae99SBarry Smith } 17347c6ae99SBarry Smith next = next->next; 17447c6ae99SBarry Smith } 17547c6ae99SBarry Smith com->setup = PETSC_TRUE; 17647c6ae99SBarry Smith PetscFunctionReturn(0); 17747c6ae99SBarry Smith } 17847c6ae99SBarry Smith 17947c6ae99SBarry Smith 18047c6ae99SBarry Smith #undef __FUNCT__ 18147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess_Array" 18247c6ae99SBarry Smith PetscErrorCode DMCompositeGetAccess_Array(DM dm,struct DMCompositeLink *mine,Vec vec,PetscScalar **array) 18347c6ae99SBarry Smith { 18447c6ae99SBarry Smith PetscErrorCode ierr; 18547c6ae99SBarry Smith PetscScalar *varray; 18647c6ae99SBarry Smith PetscMPIInt rank; 18747c6ae99SBarry Smith 18847c6ae99SBarry Smith PetscFunctionBegin; 18947c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 19047c6ae99SBarry Smith if (array) { 19147c6ae99SBarry Smith if (rank == mine->rank) { 19247c6ae99SBarry Smith ierr = VecGetArray(vec,&varray);CHKERRQ(ierr); 19347c6ae99SBarry Smith *array = varray + mine->rstart; 19447c6ae99SBarry Smith ierr = VecRestoreArray(vec,&varray);CHKERRQ(ierr); 19547c6ae99SBarry Smith } else { 19647c6ae99SBarry Smith *array = 0; 19747c6ae99SBarry Smith } 19847c6ae99SBarry Smith } 19947c6ae99SBarry Smith PetscFunctionReturn(0); 20047c6ae99SBarry Smith } 20147c6ae99SBarry Smith 20247c6ae99SBarry Smith #undef __FUNCT__ 20347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess_DM" 20447c6ae99SBarry Smith PetscErrorCode DMCompositeGetAccess_DM(DM dm,struct DMCompositeLink *mine,Vec vec,Vec *global) 20547c6ae99SBarry Smith { 20647c6ae99SBarry Smith PetscErrorCode ierr; 20747c6ae99SBarry Smith PetscScalar *array; 20847c6ae99SBarry Smith 20947c6ae99SBarry Smith PetscFunctionBegin; 21047c6ae99SBarry Smith if (global) { 21147c6ae99SBarry Smith ierr = DMGetGlobalVector(mine->dm,global);CHKERRQ(ierr); 21247c6ae99SBarry Smith ierr = VecGetArray(vec,&array);CHKERRQ(ierr); 21347c6ae99SBarry Smith ierr = VecPlaceArray(*global,array+mine->rstart);CHKERRQ(ierr); 21447c6ae99SBarry Smith ierr = VecRestoreArray(vec,&array);CHKERRQ(ierr); 21547c6ae99SBarry Smith } 21647c6ae99SBarry Smith PetscFunctionReturn(0); 21747c6ae99SBarry Smith } 21847c6ae99SBarry Smith 21947c6ae99SBarry Smith #undef __FUNCT__ 22047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess_Array" 22147c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreAccess_Array(DM dm,struct DMCompositeLink *mine,Vec vec,PetscScalar **array) 22247c6ae99SBarry Smith { 22347c6ae99SBarry Smith PetscFunctionBegin; 22447c6ae99SBarry Smith PetscFunctionReturn(0); 22547c6ae99SBarry Smith } 22647c6ae99SBarry Smith 22747c6ae99SBarry Smith #undef __FUNCT__ 22847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess_DM" 22947c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreAccess_DM(DM dm,struct DMCompositeLink *mine,Vec vec,Vec *global) 23047c6ae99SBarry Smith { 23147c6ae99SBarry Smith PetscErrorCode ierr; 23247c6ae99SBarry Smith 23347c6ae99SBarry Smith PetscFunctionBegin; 23447c6ae99SBarry Smith if (global) { 23547c6ae99SBarry Smith ierr = VecResetArray(*global);CHKERRQ(ierr); 23647c6ae99SBarry Smith ierr = DMRestoreGlobalVector(mine->dm,global);CHKERRQ(ierr); 23747c6ae99SBarry Smith } 23847c6ae99SBarry Smith PetscFunctionReturn(0); 23947c6ae99SBarry Smith } 24047c6ae99SBarry Smith 24147c6ae99SBarry Smith #undef __FUNCT__ 24247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter_Array" 24347c6ae99SBarry Smith PetscErrorCode DMCompositeScatter_Array(DM dm,struct DMCompositeLink *mine,Vec vec,PetscScalar *array) 24447c6ae99SBarry Smith { 24547c6ae99SBarry Smith PetscErrorCode ierr; 24647c6ae99SBarry Smith PetscScalar *varray; 24747c6ae99SBarry Smith PetscMPIInt rank; 24847c6ae99SBarry Smith 24947c6ae99SBarry Smith PetscFunctionBegin; 25047c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 25147c6ae99SBarry Smith if (rank == mine->rank) { 25247c6ae99SBarry Smith ierr = VecGetArray(vec,&varray);CHKERRQ(ierr); 25347c6ae99SBarry Smith ierr = PetscMemcpy(array,varray+mine->rstart,mine->n*sizeof(PetscScalar));CHKERRQ(ierr); 25447c6ae99SBarry Smith ierr = VecRestoreArray(vec,&varray);CHKERRQ(ierr); 25547c6ae99SBarry Smith } 25606ebdd98SJed Brown ierr = MPI_Bcast(array,mine->nlocal,MPIU_SCALAR,mine->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 25747c6ae99SBarry Smith PetscFunctionReturn(0); 25847c6ae99SBarry Smith } 25947c6ae99SBarry Smith 26047c6ae99SBarry Smith #undef __FUNCT__ 26147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter_DM" 26247c6ae99SBarry Smith PetscErrorCode DMCompositeScatter_DM(DM dm,struct DMCompositeLink *mine,Vec vec,Vec local) 26347c6ae99SBarry Smith { 26447c6ae99SBarry Smith PetscErrorCode ierr; 26547c6ae99SBarry Smith PetscScalar *array; 26647c6ae99SBarry Smith Vec global; 26747c6ae99SBarry Smith 26847c6ae99SBarry Smith PetscFunctionBegin; 26947c6ae99SBarry Smith ierr = DMGetGlobalVector(mine->dm,&global);CHKERRQ(ierr); 27047c6ae99SBarry Smith ierr = VecGetArray(vec,&array);CHKERRQ(ierr); 27147c6ae99SBarry Smith ierr = VecPlaceArray(global,array+mine->rstart);CHKERRQ(ierr); 27247c6ae99SBarry Smith ierr = DMGlobalToLocalBegin(mine->dm,global,INSERT_VALUES,local);CHKERRQ(ierr); 27347c6ae99SBarry Smith ierr = DMGlobalToLocalEnd(mine->dm,global,INSERT_VALUES,local);CHKERRQ(ierr); 27447c6ae99SBarry Smith ierr = VecRestoreArray(vec,&array);CHKERRQ(ierr); 27547c6ae99SBarry Smith ierr = VecResetArray(global);CHKERRQ(ierr); 27647c6ae99SBarry Smith ierr = DMRestoreGlobalVector(mine->dm,&global);CHKERRQ(ierr); 27747c6ae99SBarry Smith PetscFunctionReturn(0); 27847c6ae99SBarry Smith } 27947c6ae99SBarry Smith 28047c6ae99SBarry Smith #undef __FUNCT__ 28147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather_Array" 282acc1e270SJed Brown PetscErrorCode DMCompositeGather_Array(DM dm,struct DMCompositeLink *mine,Vec vec,InsertMode imode,const PetscScalar *array) 28347c6ae99SBarry Smith { 28447c6ae99SBarry Smith PetscErrorCode ierr; 28547c6ae99SBarry Smith PetscScalar *varray; 28647c6ae99SBarry Smith PetscMPIInt rank; 28747c6ae99SBarry Smith 28847c6ae99SBarry Smith PetscFunctionBegin; 28947c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 29047c6ae99SBarry Smith if (rank == mine->rank) { 29147c6ae99SBarry Smith ierr = VecGetArray(vec,&varray);CHKERRQ(ierr); 29247c6ae99SBarry Smith if (varray+mine->rstart == array) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"You need not DMCompositeGather() into objects obtained via DMCompositeGetAccess()"); 293acc1e270SJed Brown } 294df0c820aSJed Brown switch (imode) { 295df0c820aSJed Brown case INSERT_VALUES: 296acc1e270SJed Brown if (rank == mine->rank) { 29747c6ae99SBarry Smith ierr = PetscMemcpy(varray+mine->rstart,array,mine->n*sizeof(PetscScalar));CHKERRQ(ierr); 298acc1e270SJed Brown } 299df0c820aSJed Brown break; 300df0c820aSJed Brown case ADD_VALUES: { 301df0c820aSJed Brown PetscInt i; 302760fd489SMatthew G Knepley void *source; 303acc1e270SJed Brown PetscScalar *buffer,*dest; 304acc1e270SJed Brown if (rank == mine->rank) { 305acc1e270SJed Brown dest = &varray[mine->rstart]; 306acc1e270SJed Brown #if defined(PETSC_HAVE_MPI_IN_PLACE) 307acc1e270SJed Brown buffer = dest; 308acc1e270SJed Brown source = MPI_IN_PLACE; 309acc1e270SJed Brown #else 31006ebdd98SJed Brown ierr = PetscMalloc(mine->nlocal*sizeof(PetscScalar),&buffer);CHKERRQ(ierr); 311760fd489SMatthew G Knepley source = (void *) buffer; 312acc1e270SJed Brown #endif 31306ebdd98SJed Brown for (i=0; i<mine->nlocal; i++) buffer[i] = varray[mine->rstart+i] + array[i]; 314acc1e270SJed Brown } else { 315760fd489SMatthew G Knepley source = (void *) array; 316acc1e270SJed Brown dest = PETSC_NULL; 317acc1e270SJed Brown } 31806ebdd98SJed Brown ierr = MPI_Reduce(source,dest,mine->nlocal,MPIU_SCALAR,MPI_SUM,mine->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 319acc1e270SJed Brown #if !defined(PETSC_HAVE_MPI_IN_PLACE) 320acc1e270SJed Brown if (rank == mine->rank) {ierr = PetscFree(source);CHKERRQ(ierr);} 321acc1e270SJed Brown #endif 322df0c820aSJed Brown } break; 323df0c820aSJed Brown default: SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"imode"); 324df0c820aSJed Brown } 325acc1e270SJed Brown if (rank == mine->rank) {ierr = VecRestoreArray(vec,&varray);CHKERRQ(ierr);} 32647c6ae99SBarry Smith PetscFunctionReturn(0); 32747c6ae99SBarry Smith } 32847c6ae99SBarry Smith 32947c6ae99SBarry Smith #undef __FUNCT__ 33047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather_DM" 331df0c820aSJed Brown PetscErrorCode DMCompositeGather_DM(DM dm,struct DMCompositeLink *mine,Vec vec,InsertMode imode,Vec local) 33247c6ae99SBarry Smith { 33347c6ae99SBarry Smith PetscErrorCode ierr; 33447c6ae99SBarry Smith PetscScalar *array; 33547c6ae99SBarry Smith Vec global; 33647c6ae99SBarry Smith 33747c6ae99SBarry Smith PetscFunctionBegin; 33847c6ae99SBarry Smith ierr = DMGetGlobalVector(mine->dm,&global);CHKERRQ(ierr); 33947c6ae99SBarry Smith ierr = VecGetArray(vec,&array);CHKERRQ(ierr); 34047c6ae99SBarry Smith ierr = VecPlaceArray(global,array+mine->rstart);CHKERRQ(ierr); 341df0c820aSJed Brown ierr = DMLocalToGlobalBegin(mine->dm,local,imode,global);CHKERRQ(ierr); 342df0c820aSJed Brown ierr = DMLocalToGlobalEnd(mine->dm,local,imode,global);CHKERRQ(ierr); 34347c6ae99SBarry Smith ierr = VecRestoreArray(vec,&array);CHKERRQ(ierr); 34447c6ae99SBarry Smith ierr = VecResetArray(global);CHKERRQ(ierr); 34547c6ae99SBarry Smith ierr = DMRestoreGlobalVector(mine->dm,&global);CHKERRQ(ierr); 34647c6ae99SBarry Smith PetscFunctionReturn(0); 34747c6ae99SBarry Smith } 34847c6ae99SBarry Smith 34947c6ae99SBarry Smith /* ----------------------------------------------------------------------------------*/ 35047c6ae99SBarry Smith 35147c6ae99SBarry Smith #include <stdarg.h> 35247c6ae99SBarry Smith 35347c6ae99SBarry Smith #undef __FUNCT__ 35447c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetNumberDM" 35547c6ae99SBarry Smith /*@C 35647c6ae99SBarry Smith DMCompositeGetNumberDM - Get's the number of DM objects in the DMComposite 35747c6ae99SBarry Smith representation. 35847c6ae99SBarry Smith 35947c6ae99SBarry Smith Not Collective 36047c6ae99SBarry Smith 36147c6ae99SBarry Smith Input Parameter: 36247c6ae99SBarry Smith . dm - the packer object 36347c6ae99SBarry Smith 36447c6ae99SBarry Smith Output Parameter: 36547c6ae99SBarry Smith . nDM - the number of DMs 36647c6ae99SBarry Smith 36747c6ae99SBarry Smith Level: beginner 36847c6ae99SBarry Smith 36947c6ae99SBarry Smith @*/ 3707087cfbeSBarry Smith PetscErrorCode DMCompositeGetNumberDM(DM dm,PetscInt *nDM) 37147c6ae99SBarry Smith { 37247c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 37347c6ae99SBarry Smith PetscFunctionBegin; 37447c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 37547c6ae99SBarry Smith *nDM = com->nDM; 37647c6ae99SBarry Smith PetscFunctionReturn(0); 37747c6ae99SBarry Smith } 37847c6ae99SBarry Smith 37947c6ae99SBarry Smith 38047c6ae99SBarry Smith #undef __FUNCT__ 38147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess" 38247c6ae99SBarry Smith /*@C 38347c6ae99SBarry Smith DMCompositeGetAccess - Allows one to access the individual packed vectors in their global 38447c6ae99SBarry Smith representation. 38547c6ae99SBarry Smith 38647c6ae99SBarry Smith Collective on DMComposite 38747c6ae99SBarry Smith 38847c6ae99SBarry Smith Input Parameter: 38947c6ae99SBarry Smith + dm - the packer object 39047c6ae99SBarry Smith . gvec - the global vector 39147c6ae99SBarry Smith - ... - the individual sequential or parallel objects (arrays or vectors) 39247c6ae99SBarry Smith 39347c6ae99SBarry Smith Notes: Use DMCompositeRestoreAccess() to return the vectors when you no longer need them 39447c6ae99SBarry Smith 39547c6ae99SBarry Smith Level: advanced 39647c6ae99SBarry Smith 39747c6ae99SBarry Smith @*/ 3987087cfbeSBarry Smith PetscErrorCode DMCompositeGetAccess(DM dm,Vec gvec,...) 39947c6ae99SBarry Smith { 40047c6ae99SBarry Smith va_list Argp; 40147c6ae99SBarry Smith PetscErrorCode ierr; 40247c6ae99SBarry Smith struct DMCompositeLink *next; 40347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 40447c6ae99SBarry Smith 40547c6ae99SBarry Smith PetscFunctionBegin; 40647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 40747c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 40847c6ae99SBarry Smith next = com->next; 40947c6ae99SBarry Smith if (!com->setup) { 410d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 41147c6ae99SBarry Smith } 41247c6ae99SBarry Smith 41347c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 41447c6ae99SBarry Smith va_start(Argp,gvec); 41547c6ae99SBarry Smith while (next) { 41647c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 41747c6ae99SBarry Smith PetscScalar **array; 41847c6ae99SBarry Smith array = va_arg(Argp, PetscScalar**); 41947c6ae99SBarry Smith ierr = DMCompositeGetAccess_Array(dm,next,gvec,array);CHKERRQ(ierr); 42047c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 42147c6ae99SBarry Smith Vec *vec; 42247c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 42347c6ae99SBarry Smith ierr = DMCompositeGetAccess_DM(dm,next,gvec,vec);CHKERRQ(ierr); 42447c6ae99SBarry Smith } else { 42547c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 42647c6ae99SBarry Smith } 42747c6ae99SBarry Smith next = next->next; 42847c6ae99SBarry Smith } 42947c6ae99SBarry Smith va_end(Argp); 43047c6ae99SBarry Smith PetscFunctionReturn(0); 43147c6ae99SBarry Smith } 43247c6ae99SBarry Smith 43347c6ae99SBarry Smith #undef __FUNCT__ 43447c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess" 43547c6ae99SBarry Smith /*@C 436aa219208SBarry Smith DMCompositeRestoreAccess - Returns the vectors obtained with DMCompositeGetAccess() 43747c6ae99SBarry Smith representation. 43847c6ae99SBarry Smith 43947c6ae99SBarry Smith Collective on DMComposite 44047c6ae99SBarry Smith 44147c6ae99SBarry Smith Input Parameter: 44247c6ae99SBarry Smith + dm - the packer object 44347c6ae99SBarry Smith . gvec - the global vector 44447c6ae99SBarry Smith - ... - the individual sequential or parallel objects (arrays or vectors) 44547c6ae99SBarry Smith 44647c6ae99SBarry Smith Level: advanced 44747c6ae99SBarry Smith 4480c010503SBarry Smith .seealso DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 4496eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeScatter(), 450aa219208SBarry Smith DMCompositeRestoreAccess(), DMCompositeGetAccess() 45147c6ae99SBarry Smith 45247c6ae99SBarry Smith @*/ 4537087cfbeSBarry Smith PetscErrorCode DMCompositeRestoreAccess(DM dm,Vec gvec,...) 45447c6ae99SBarry Smith { 45547c6ae99SBarry Smith va_list Argp; 45647c6ae99SBarry Smith PetscErrorCode ierr; 45747c6ae99SBarry Smith struct DMCompositeLink *next; 45847c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 45947c6ae99SBarry Smith 46047c6ae99SBarry Smith PetscFunctionBegin; 46147c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 46247c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 46347c6ae99SBarry Smith next = com->next; 46447c6ae99SBarry Smith if (!com->setup) { 465d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 46647c6ae99SBarry Smith } 46747c6ae99SBarry Smith 46847c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 46947c6ae99SBarry Smith va_start(Argp,gvec); 47047c6ae99SBarry Smith while (next) { 47147c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 47247c6ae99SBarry Smith PetscScalar **array; 47347c6ae99SBarry Smith array = va_arg(Argp, PetscScalar**); 47447c6ae99SBarry Smith ierr = DMCompositeRestoreAccess_Array(dm,next,gvec,array);CHKERRQ(ierr); 47547c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 47647c6ae99SBarry Smith Vec *vec; 47747c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 47847c6ae99SBarry Smith ierr = DMCompositeRestoreAccess_DM(dm,next,gvec,vec);CHKERRQ(ierr); 47947c6ae99SBarry Smith } else { 48047c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 48147c6ae99SBarry Smith } 48247c6ae99SBarry Smith next = next->next; 48347c6ae99SBarry Smith } 48447c6ae99SBarry Smith va_end(Argp); 48547c6ae99SBarry Smith PetscFunctionReturn(0); 48647c6ae99SBarry Smith } 48747c6ae99SBarry Smith 48847c6ae99SBarry Smith #undef __FUNCT__ 48947c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter" 49047c6ae99SBarry Smith /*@C 49147c6ae99SBarry Smith DMCompositeScatter - Scatters from a global packed vector into its individual local vectors 49247c6ae99SBarry Smith 49347c6ae99SBarry Smith Collective on DMComposite 49447c6ae99SBarry Smith 49547c6ae99SBarry Smith Input Parameter: 49647c6ae99SBarry Smith + dm - the packer object 49747c6ae99SBarry Smith . gvec - the global vector 4988fd8f222SJed Brown - ... - the individual sequential objects (arrays or vectors), PETSC_NULL for those that are not needed 49947c6ae99SBarry Smith 50047c6ae99SBarry Smith Level: advanced 50147c6ae99SBarry Smith 5020c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 5036eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 50447c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 50547c6ae99SBarry Smith 50647c6ae99SBarry Smith @*/ 5077087cfbeSBarry Smith PetscErrorCode DMCompositeScatter(DM dm,Vec gvec,...) 50847c6ae99SBarry Smith { 50947c6ae99SBarry Smith va_list Argp; 51047c6ae99SBarry Smith PetscErrorCode ierr; 51147c6ae99SBarry Smith struct DMCompositeLink *next; 5128fd8f222SJed Brown PetscInt cnt; 51347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 51447c6ae99SBarry Smith 51547c6ae99SBarry Smith PetscFunctionBegin; 51647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 51747c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 51847c6ae99SBarry Smith if (!com->setup) { 519d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 52047c6ae99SBarry Smith } 52147c6ae99SBarry Smith 52247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 52347c6ae99SBarry Smith va_start(Argp,gvec); 5248fd8f222SJed Brown for (cnt=3,next=com->next; next; cnt++,next=next->next) { 52547c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 52647c6ae99SBarry Smith PetscScalar *array; 52747c6ae99SBarry Smith array = va_arg(Argp, PetscScalar*); 528c72eef85SJed Brown if (array) PetscValidScalarPointer(array,cnt); 529c72eef85SJed Brown PetscValidLogicalCollectiveBool(dm,!!array,cnt); 5308fd8f222SJed Brown if (!array) continue; 53147c6ae99SBarry Smith ierr = DMCompositeScatter_Array(dm,next,gvec,array);CHKERRQ(ierr); 53247c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 53347c6ae99SBarry Smith Vec vec; 53447c6ae99SBarry Smith vec = va_arg(Argp, Vec); 5358fd8f222SJed Brown if (!vec) continue; 53647c6ae99SBarry Smith PetscValidHeaderSpecific(vec,VEC_CLASSID,cnt); 53747c6ae99SBarry Smith ierr = DMCompositeScatter_DM(dm,next,gvec,vec);CHKERRQ(ierr); 53847c6ae99SBarry Smith } else { 53947c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 54047c6ae99SBarry Smith } 54147c6ae99SBarry Smith } 54247c6ae99SBarry Smith va_end(Argp); 54347c6ae99SBarry Smith PetscFunctionReturn(0); 54447c6ae99SBarry Smith } 54547c6ae99SBarry Smith 54647c6ae99SBarry Smith #undef __FUNCT__ 54747c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather" 54847c6ae99SBarry Smith /*@C 54947c6ae99SBarry Smith DMCompositeGather - Gathers into a global packed vector from its individual local vectors 55047c6ae99SBarry Smith 55147c6ae99SBarry Smith Collective on DMComposite 55247c6ae99SBarry Smith 55347c6ae99SBarry Smith Input Parameter: 55447c6ae99SBarry Smith + dm - the packer object 55547c6ae99SBarry Smith . gvec - the global vector 5568fd8f222SJed Brown - ... - the individual sequential objects (arrays or vectors), PETSC_NULL for any that are not needed 55747c6ae99SBarry Smith 55847c6ae99SBarry Smith Level: advanced 55947c6ae99SBarry Smith 5600c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 5616eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 56247c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 56347c6ae99SBarry Smith 56447c6ae99SBarry Smith @*/ 5657087cfbeSBarry Smith PetscErrorCode DMCompositeGather(DM dm,Vec gvec,InsertMode imode,...) 56647c6ae99SBarry Smith { 56747c6ae99SBarry Smith va_list Argp; 56847c6ae99SBarry Smith PetscErrorCode ierr; 56947c6ae99SBarry Smith struct DMCompositeLink *next; 57047c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 5718fd8f222SJed Brown PetscInt cnt; 57247c6ae99SBarry Smith 57347c6ae99SBarry Smith PetscFunctionBegin; 57447c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 57547c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 57647c6ae99SBarry Smith if (!com->setup) { 577d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 57847c6ae99SBarry Smith } 57947c6ae99SBarry Smith 58047c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 581df0c820aSJed Brown va_start(Argp,imode); 5828fd8f222SJed Brown for (cnt=3,next=com->next; next; cnt++,next=next->next) { 58347c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 58447c6ae99SBarry Smith PetscScalar *array; 58547c6ae99SBarry Smith array = va_arg(Argp, PetscScalar*); 5868fd8f222SJed Brown if (!array) continue; 5878fd8f222SJed Brown PetscValidScalarPointer(array,cnt); 588df0c820aSJed Brown ierr = DMCompositeGather_Array(dm,next,gvec,imode,array);CHKERRQ(ierr); 58947c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 59047c6ae99SBarry Smith Vec vec; 59147c6ae99SBarry Smith vec = va_arg(Argp, Vec); 5928fd8f222SJed Brown if (!vec) continue; 5938fd8f222SJed Brown PetscValidHeaderSpecific(vec,VEC_CLASSID,cnt); 594df0c820aSJed Brown ierr = DMCompositeGather_DM(dm,next,gvec,imode,vec);CHKERRQ(ierr); 59547c6ae99SBarry Smith } else { 59647c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 59747c6ae99SBarry Smith } 59847c6ae99SBarry Smith } 59947c6ae99SBarry Smith va_end(Argp); 60047c6ae99SBarry Smith PetscFunctionReturn(0); 60147c6ae99SBarry Smith } 60247c6ae99SBarry Smith 60347c6ae99SBarry Smith #undef __FUNCT__ 60447c6ae99SBarry Smith #define __FUNCT__ "DMCompositeAddArray" 60547c6ae99SBarry Smith /*@C 60647c6ae99SBarry Smith DMCompositeAddArray - adds an "redundant" array to a DMComposite. The array values will 60747c6ae99SBarry Smith be stored in part of the array on process orank. 60847c6ae99SBarry Smith 60947c6ae99SBarry Smith Collective on DMComposite 61047c6ae99SBarry Smith 61147c6ae99SBarry Smith Input Parameter: 61247c6ae99SBarry Smith + dm - the packer object 61347c6ae99SBarry Smith . orank - the process on which the array entries officially live, this number must be 61447c6ae99SBarry Smith the same on all processes. 61547c6ae99SBarry Smith - n - the length of the array 61647c6ae99SBarry Smith 61747c6ae99SBarry Smith Level: advanced 61847c6ae99SBarry Smith 6190c010503SBarry Smith .seealso DMDestroy(), DMCompositeGather(), DMCompositeAddDM(), DMCreateGlobalVector(), 6206eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 62147c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 62247c6ae99SBarry Smith 62347c6ae99SBarry Smith @*/ 6247087cfbeSBarry Smith PetscErrorCode DMCompositeAddArray(DM dm,PetscMPIInt orank,PetscInt n) 62547c6ae99SBarry Smith { 62647c6ae99SBarry Smith struct DMCompositeLink *mine,*next; 62747c6ae99SBarry Smith PetscErrorCode ierr; 62847c6ae99SBarry Smith PetscMPIInt rank; 62947c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 63047c6ae99SBarry Smith 63147c6ae99SBarry Smith PetscFunctionBegin; 63247c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 63347c6ae99SBarry Smith next = com->next; 63447c6ae99SBarry Smith if (com->setup) { 63547c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_ARG_WRONGSTATE,"Cannot add an array once you have used the DMComposite"); 63647c6ae99SBarry Smith } 63747c6ae99SBarry Smith #if defined(PETSC_USE_DEBUG) 63847c6ae99SBarry Smith { 63947c6ae99SBarry Smith PetscMPIInt orankmax; 64047c6ae99SBarry Smith ierr = MPI_Allreduce(&orank,&orankmax,1,MPI_INT,MPI_MAX,((PetscObject)dm)->comm);CHKERRQ(ierr); 64147c6ae99SBarry Smith if (orank != orankmax) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"orank %d must be equal on all processes, another process has value %d",orank,orankmax); 64247c6ae99SBarry Smith } 64347c6ae99SBarry Smith #endif 64447c6ae99SBarry Smith 64547c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 64647c6ae99SBarry Smith /* create new link */ 64747c6ae99SBarry Smith ierr = PetscNew(struct DMCompositeLink,&mine);CHKERRQ(ierr); 64806ebdd98SJed Brown mine->nlocal = n; 64906ebdd98SJed Brown mine->n = (rank == orank) ? n : 0; 65047c6ae99SBarry Smith mine->rank = orank; 65147c6ae99SBarry Smith mine->dm = PETSC_NULL; 65247c6ae99SBarry Smith mine->type = DMCOMPOSITE_ARRAY; 65347c6ae99SBarry Smith mine->next = PETSC_NULL; 65447c6ae99SBarry Smith if (rank == mine->rank) {com->n += n;com->nmine++;} 65547c6ae99SBarry Smith 65647c6ae99SBarry Smith /* add to end of list */ 65747c6ae99SBarry Smith if (!next) { 65847c6ae99SBarry Smith com->next = mine; 65947c6ae99SBarry Smith } else { 66047c6ae99SBarry Smith while (next->next) next = next->next; 66147c6ae99SBarry Smith next->next = mine; 66247c6ae99SBarry Smith } 66347c6ae99SBarry Smith com->nredundant++; 66447c6ae99SBarry Smith PetscFunctionReturn(0); 66547c6ae99SBarry Smith } 66647c6ae99SBarry Smith 66747c6ae99SBarry Smith #undef __FUNCT__ 66847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeAddDM" 66947c6ae99SBarry Smith /*@C 670aa219208SBarry Smith DMCompositeAddDM - adds a DM vector to a DMComposite 67147c6ae99SBarry Smith 67247c6ae99SBarry Smith Collective on DMComposite 67347c6ae99SBarry Smith 67447c6ae99SBarry Smith Input Parameter: 67547c6ae99SBarry Smith + dm - the packer object 67647c6ae99SBarry Smith - dm - the DM object, if the DM is a da you will need to caste it with a (DM) 67747c6ae99SBarry Smith 67847c6ae99SBarry Smith Level: advanced 67947c6ae99SBarry Smith 6800c010503SBarry Smith .seealso DMDestroy(), DMCompositeGather(), DMCompositeAddDM(), DMCreateGlobalVector(), 6816eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 68247c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 68347c6ae99SBarry Smith 68447c6ae99SBarry Smith @*/ 6857087cfbeSBarry Smith PetscErrorCode DMCompositeAddDM(DM dmc,DM dm) 68647c6ae99SBarry Smith { 68747c6ae99SBarry Smith PetscErrorCode ierr; 68806ebdd98SJed Brown PetscInt n,nlocal; 68947c6ae99SBarry Smith struct DMCompositeLink *mine,*next; 69006ebdd98SJed Brown Vec global,local; 69147c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dmc->data; 69247c6ae99SBarry Smith 69347c6ae99SBarry Smith PetscFunctionBegin; 69447c6ae99SBarry Smith PetscValidHeaderSpecific(dmc,DM_CLASSID,1); 69547c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,2); 69647c6ae99SBarry Smith next = com->next; 697aa219208SBarry Smith if (com->setup) SETERRQ(((PetscObject)dmc)->comm,PETSC_ERR_ARG_WRONGSTATE,"Cannot add a DM once you have used the DMComposite"); 69847c6ae99SBarry Smith 69947c6ae99SBarry Smith /* create new link */ 70047c6ae99SBarry Smith ierr = PetscNew(struct DMCompositeLink,&mine);CHKERRQ(ierr); 70147c6ae99SBarry Smith ierr = PetscObjectReference((PetscObject)dm);CHKERRQ(ierr); 70247c6ae99SBarry Smith ierr = DMGetGlobalVector(dm,&global);CHKERRQ(ierr); 70347c6ae99SBarry Smith ierr = VecGetLocalSize(global,&n);CHKERRQ(ierr); 70447c6ae99SBarry Smith ierr = DMRestoreGlobalVector(dm,&global);CHKERRQ(ierr); 70506ebdd98SJed Brown ierr = DMGetLocalVector(dm,&local);CHKERRQ(ierr); 70606ebdd98SJed Brown ierr = VecGetSize(local,&nlocal);CHKERRQ(ierr); 70706ebdd98SJed Brown ierr = DMRestoreLocalVector(dm,&local);CHKERRQ(ierr); 70847c6ae99SBarry Smith mine->n = n; 70906ebdd98SJed Brown mine->nlocal = nlocal; 71047c6ae99SBarry Smith mine->dm = dm; 71147c6ae99SBarry Smith mine->type = DMCOMPOSITE_DM; 71247c6ae99SBarry Smith mine->next = PETSC_NULL; 71347c6ae99SBarry Smith com->n += n; 71447c6ae99SBarry Smith 71547c6ae99SBarry Smith /* add to end of list */ 71647c6ae99SBarry Smith if (!next) { 71747c6ae99SBarry Smith com->next = mine; 71847c6ae99SBarry Smith } else { 71947c6ae99SBarry Smith while (next->next) next = next->next; 72047c6ae99SBarry Smith next->next = mine; 72147c6ae99SBarry Smith } 72247c6ae99SBarry Smith com->nDM++; 72347c6ae99SBarry Smith com->nmine++; 72447c6ae99SBarry Smith PetscFunctionReturn(0); 72547c6ae99SBarry Smith } 72647c6ae99SBarry Smith 7277087cfbeSBarry Smith extern PetscErrorCode VecView_MPI(Vec,PetscViewer); 72847c6ae99SBarry Smith EXTERN_C_BEGIN 72947c6ae99SBarry Smith #undef __FUNCT__ 73047c6ae99SBarry Smith #define __FUNCT__ "VecView_DMComposite" 7317087cfbeSBarry Smith PetscErrorCode VecView_DMComposite(Vec gvec,PetscViewer viewer) 73247c6ae99SBarry Smith { 73347c6ae99SBarry Smith DM dm; 73447c6ae99SBarry Smith PetscErrorCode ierr; 73547c6ae99SBarry Smith struct DMCompositeLink *next; 73647c6ae99SBarry Smith PetscBool isdraw; 737cef07954SSatish Balay DM_Composite *com; 73847c6ae99SBarry Smith 73947c6ae99SBarry Smith PetscFunctionBegin; 740*3c0c59f3SBarry Smith ierr = PetscObjectQuery((PetscObject)gvec,"DM",(PetscObject*)&dm);CHKERRQ(ierr); 74147c6ae99SBarry Smith if (!dm) SETERRQ(((PetscObject)gvec)->comm,PETSC_ERR_ARG_WRONG,"Vector not generated from a DMComposite"); 74247c6ae99SBarry Smith com = (DM_Composite*)dm->data; 74347c6ae99SBarry Smith next = com->next; 74447c6ae99SBarry Smith 74547c6ae99SBarry Smith ierr = PetscTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr); 74647c6ae99SBarry Smith if (!isdraw) { 74747c6ae99SBarry Smith /* do I really want to call this? */ 74847c6ae99SBarry Smith ierr = VecView_MPI(gvec,viewer);CHKERRQ(ierr); 74947c6ae99SBarry Smith } else { 75047c6ae99SBarry Smith PetscInt cnt = 0; 75147c6ae99SBarry Smith 75247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 75347c6ae99SBarry Smith while (next) { 75447c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 75547c6ae99SBarry Smith PetscScalar *array; 75647c6ae99SBarry Smith ierr = DMCompositeGetAccess_Array(dm,next,gvec,&array);CHKERRQ(ierr); 75747c6ae99SBarry Smith 75847c6ae99SBarry Smith /*skip it for now */ 75947c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 76047c6ae99SBarry Smith Vec vec; 76147c6ae99SBarry Smith PetscInt bs; 76247c6ae99SBarry Smith 76347c6ae99SBarry Smith ierr = DMCompositeGetAccess_DM(dm,next,gvec,&vec);CHKERRQ(ierr); 76447c6ae99SBarry Smith ierr = VecView(vec,viewer);CHKERRQ(ierr); 76547c6ae99SBarry Smith ierr = VecGetBlockSize(vec,&bs);CHKERRQ(ierr); 76647c6ae99SBarry Smith ierr = DMCompositeRestoreAccess_DM(dm,next,gvec,&vec);CHKERRQ(ierr); 76747c6ae99SBarry Smith ierr = PetscViewerDrawBaseAdd(viewer,bs);CHKERRQ(ierr); 76847c6ae99SBarry Smith cnt += bs; 76947c6ae99SBarry Smith } else { 77047c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 77147c6ae99SBarry Smith } 77247c6ae99SBarry Smith next = next->next; 77347c6ae99SBarry Smith } 77447c6ae99SBarry Smith ierr = PetscViewerDrawBaseAdd(viewer,-cnt);CHKERRQ(ierr); 77547c6ae99SBarry Smith } 77647c6ae99SBarry Smith PetscFunctionReturn(0); 77747c6ae99SBarry Smith } 77847c6ae99SBarry Smith EXTERN_C_END 77947c6ae99SBarry Smith 78047c6ae99SBarry Smith 78147c6ae99SBarry Smith #undef __FUNCT__ 7820c010503SBarry Smith #define __FUNCT__ "DMCreateGlobalVector_Composite" 7837087cfbeSBarry Smith PetscErrorCode DMCreateGlobalVector_Composite(DM dm,Vec *gvec) 78447c6ae99SBarry Smith { 78547c6ae99SBarry Smith PetscErrorCode ierr; 78647c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 78747c6ae99SBarry Smith 78847c6ae99SBarry Smith PetscFunctionBegin; 78947c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 79047c6ae99SBarry Smith if (!com->setup) { 791d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 79247c6ae99SBarry Smith } 79347c6ae99SBarry Smith ierr = VecCreateMPI(((PetscObject)dm)->comm,com->n,com->N,gvec);CHKERRQ(ierr); 794*3c0c59f3SBarry Smith ierr = PetscObjectCompose((PetscObject)*gvec,"DM",(PetscObject)dm);CHKERRQ(ierr); 79547c6ae99SBarry Smith ierr = VecSetOperation(*gvec,VECOP_VIEW,(void(*)(void))VecView_DMComposite);CHKERRQ(ierr); 79647c6ae99SBarry Smith PetscFunctionReturn(0); 79747c6ae99SBarry Smith } 79847c6ae99SBarry Smith 79947c6ae99SBarry Smith #undef __FUNCT__ 8000c010503SBarry Smith #define __FUNCT__ "DMCreateLocalVector_Composite" 8017087cfbeSBarry Smith PetscErrorCode DMCreateLocalVector_Composite(DM dm,Vec *lvec) 80247c6ae99SBarry Smith { 80347c6ae99SBarry Smith PetscErrorCode ierr; 80447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 80547c6ae99SBarry Smith 80647c6ae99SBarry Smith PetscFunctionBegin; 80747c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 80847c6ae99SBarry Smith if (!com->setup) { 809d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 81047c6ae99SBarry Smith } 81147c6ae99SBarry Smith ierr = VecCreateSeq(((PetscObject)dm)->comm,com->nghost,lvec);CHKERRQ(ierr); 812*3c0c59f3SBarry Smith ierr = PetscObjectCompose((PetscObject)*lvec,"DM",(PetscObject)dm);CHKERRQ(ierr); 81347c6ae99SBarry Smith PetscFunctionReturn(0); 81447c6ae99SBarry Smith } 81547c6ae99SBarry Smith 81647c6ae99SBarry Smith #undef __FUNCT__ 8176eb61c8cSJed Brown #define __FUNCT__ "DMCompositeGetISLocalToGlobalMappings" 81847c6ae99SBarry Smith /*@C 8196eb61c8cSJed Brown DMCompositeGetISLocalToGlobalMappings - gets an ISLocalToGlobalMapping for each DM/array in the DMComposite, maps to the composite global space 82047c6ae99SBarry Smith 82106ebdd98SJed Brown Collective on DM 82247c6ae99SBarry Smith 82347c6ae99SBarry Smith Input Parameter: 82447c6ae99SBarry Smith . dm - the packer object 82547c6ae99SBarry Smith 82647c6ae99SBarry Smith Output Parameters: 8276eb61c8cSJed Brown . ltogs - the individual mappings for each packed vector/array. Note that this includes 828aa219208SBarry Smith all the ghost points that individual ghosted DMDA's may have. Also each process has an 8296eb61c8cSJed Brown mapping for EACH redundant array (not just the local redundant arrays). 83047c6ae99SBarry Smith 83147c6ae99SBarry Smith Level: advanced 83247c6ae99SBarry Smith 83347c6ae99SBarry Smith Notes: 8346eb61c8cSJed Brown Each entry of ltogs should be destroyed with ISLocalToGlobalMappingDestroy(), the ltogs array should be freed with PetscFree(). 83547c6ae99SBarry Smith 8360c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 83747c6ae99SBarry Smith DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(), 83847c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries() 83947c6ae99SBarry Smith 84047c6ae99SBarry Smith @*/ 8417087cfbeSBarry Smith PetscErrorCode DMCompositeGetISLocalToGlobalMappings(DM dm,ISLocalToGlobalMapping **ltogs) 84247c6ae99SBarry Smith { 84347c6ae99SBarry Smith PetscErrorCode ierr; 84447c6ae99SBarry Smith PetscInt i,*idx,n,cnt; 84547c6ae99SBarry Smith struct DMCompositeLink *next; 84647c6ae99SBarry Smith PetscMPIInt rank; 84747c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 84847c6ae99SBarry Smith 84947c6ae99SBarry Smith PetscFunctionBegin; 85047c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 851acc1e270SJed Brown ierr = PetscMalloc((com->nDM+com->nredundant)*sizeof(ISLocalToGlobalMapping),ltogs);CHKERRQ(ierr); 85247c6ae99SBarry Smith next = com->next; 85347c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 85447c6ae99SBarry Smith 85547c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 85647c6ae99SBarry Smith cnt = 0; 85747c6ae99SBarry Smith while (next) { 85847c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 85906ebdd98SJed Brown ierr = PetscMalloc(next->nlocal*sizeof(PetscInt),&idx);CHKERRQ(ierr); 86047c6ae99SBarry Smith if (rank == next->rank) { 86106ebdd98SJed Brown for (i=0; i<next->nlocal; i++) idx[i] = next->grstart + i; 86247c6ae99SBarry Smith } 86306ebdd98SJed Brown ierr = MPI_Bcast(idx,next->nlocal,MPIU_INT,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 86406ebdd98SJed Brown ierr = ISLocalToGlobalMappingCreate(((PetscObject)dm)->comm,next->nlocal,idx,PETSC_OWN_POINTER,&(*ltogs)[cnt]);CHKERRQ(ierr); 86547c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 8666eb61c8cSJed Brown ISLocalToGlobalMapping ltog; 8676eb61c8cSJed Brown PetscMPIInt size; 86886994e45SJed Brown const PetscInt *suboff,*indices; 8696eb61c8cSJed Brown Vec global; 87047c6ae99SBarry Smith 8716eb61c8cSJed Brown /* Get sub-DM global indices for each local dof */ 8721411c6eeSJed Brown ierr = DMGetLocalToGlobalMapping(next->dm,<og);CHKERRQ(ierr); 8736eb61c8cSJed Brown ierr = ISLocalToGlobalMappingGetSize(ltog,&n);CHKERRQ(ierr); 87486994e45SJed Brown ierr = ISLocalToGlobalMappingGetIndices(ltog,&indices);CHKERRQ(ierr); 87547c6ae99SBarry Smith ierr = PetscMalloc(n*sizeof(PetscInt),&idx);CHKERRQ(ierr); 87647c6ae99SBarry Smith 8776eb61c8cSJed Brown /* Get the offsets for the sub-DM global vector */ 8786eb61c8cSJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 8796eb61c8cSJed Brown ierr = VecGetOwnershipRanges(global,&suboff);CHKERRQ(ierr); 8806eb61c8cSJed Brown ierr = MPI_Comm_size(((PetscObject)global)->comm,&size);CHKERRQ(ierr); 8816eb61c8cSJed Brown 8826eb61c8cSJed Brown /* Shift the sub-DM definition of the global space to the composite global space */ 8836eb61c8cSJed Brown for (i=0; i<n; i++) { 88486994e45SJed Brown PetscInt subi = indices[i],lo = 0,hi = size,t; 8856eb61c8cSJed Brown /* Binary search to find which rank owns subi */ 8866eb61c8cSJed Brown while (hi-lo > 1) { 8876eb61c8cSJed Brown t = lo + (hi-lo)/2; 8886eb61c8cSJed Brown if (suboff[t] > subi) hi = t; 8896eb61c8cSJed Brown else lo = t; 8906eb61c8cSJed Brown } 8916eb61c8cSJed Brown idx[i] = subi - suboff[lo] + next->grstarts[lo]; 8926eb61c8cSJed Brown } 89386994e45SJed Brown ierr = ISLocalToGlobalMappingRestoreIndices(ltog,&indices);CHKERRQ(ierr); 8946eb61c8cSJed Brown ierr = ISLocalToGlobalMappingCreate(((PetscObject)dm)->comm,n,idx,PETSC_OWN_POINTER,&(*ltogs)[cnt]);CHKERRQ(ierr); 8956eb61c8cSJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 8966eb61c8cSJed Brown } else SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 89747c6ae99SBarry Smith next = next->next; 89847c6ae99SBarry Smith cnt++; 89947c6ae99SBarry Smith } 90047c6ae99SBarry Smith PetscFunctionReturn(0); 90147c6ae99SBarry Smith } 90247c6ae99SBarry Smith 90347c6ae99SBarry Smith #undef __FUNCT__ 90487c85e80SJed Brown #define __FUNCT__ "DMCompositeGetLocalISs" 90587c85e80SJed Brown /*@C 90687c85e80SJed Brown DMCompositeGetLocalISs - Gets index sets for each DM/array component of a composite local vector 90787c85e80SJed Brown 90887c85e80SJed Brown Not Collective 90987c85e80SJed Brown 91087c85e80SJed Brown Input Arguments: 91187c85e80SJed Brown . dm - composite DM 91287c85e80SJed Brown 91387c85e80SJed Brown Output Arguments: 91487c85e80SJed Brown . is - array of serial index sets for each each component of the DMComposite 91587c85e80SJed Brown 91687c85e80SJed Brown Level: intermediate 91787c85e80SJed Brown 91887c85e80SJed Brown Notes: 91987c85e80SJed Brown At present, a composite local vector does not normally exist. This function is used to provide index sets for 92087c85e80SJed Brown MatGetLocalSubMatrix(). In the future, the scatters for each entry in the DMComposite may be be merged into a single 92187c85e80SJed Brown scatter to a composite local vector. 92287c85e80SJed Brown 92387c85e80SJed Brown To get the composite global indices at all local points (including ghosts), use DMCompositeGetISLocalToGlobalMappings(). 92487c85e80SJed Brown 92587c85e80SJed Brown To get index sets for pieces of the composite global vector, use DMCompositeGetGlobalISs(). 92687c85e80SJed Brown 92787c85e80SJed Brown Each returned IS should be destroyed with ISDestroy(), the array should be freed with PetscFree(). 92887c85e80SJed Brown 92987c85e80SJed Brown .seealso: DMCompositeGetGlobalISs(), DMCompositeGetISLocalToGlobalMappings(), MatGetLocalSubMatrix(), MatCreateLocalRef() 93087c85e80SJed Brown @*/ 9317087cfbeSBarry Smith PetscErrorCode DMCompositeGetLocalISs(DM dm,IS **is) 93287c85e80SJed Brown { 93387c85e80SJed Brown PetscErrorCode ierr; 93487c85e80SJed Brown DM_Composite *com = (DM_Composite*)dm->data; 93587c85e80SJed Brown struct DMCompositeLink *link; 93687c85e80SJed Brown PetscInt cnt,start; 93787c85e80SJed Brown 93887c85e80SJed Brown PetscFunctionBegin; 93987c85e80SJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 94087c85e80SJed Brown PetscValidPointer(is,2); 94187c85e80SJed Brown ierr = PetscMalloc(com->nmine*sizeof(IS),is);CHKERRQ(ierr); 94206ebdd98SJed Brown for (cnt=0,start=0,link=com->next; link; start+=link->nlocal,cnt++,link=link->next) { 94306ebdd98SJed Brown ierr = ISCreateStride(PETSC_COMM_SELF,link->nlocal,start,1,&(*is)[cnt]);CHKERRQ(ierr); 944520db06cSJed Brown if (link->type == DMCOMPOSITE_DM) { 945520db06cSJed Brown PetscInt bs; 9461411c6eeSJed Brown ierr = DMGetBlockSize(link->dm,&bs);CHKERRQ(ierr); 947520db06cSJed Brown ierr = ISSetBlockSize((*is)[cnt],bs);CHKERRQ(ierr); 948520db06cSJed Brown } 94987c85e80SJed Brown } 95087c85e80SJed Brown PetscFunctionReturn(0); 95187c85e80SJed Brown } 95287c85e80SJed Brown 95387c85e80SJed Brown #undef __FUNCT__ 95447c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetGlobalISs" 95547c6ae99SBarry Smith /*@C 95647c6ae99SBarry Smith DMCompositeGetGlobalISs - Gets the index sets for each composed object 95747c6ae99SBarry Smith 95847c6ae99SBarry Smith Collective on DMComposite 95947c6ae99SBarry Smith 96047c6ae99SBarry Smith Input Parameter: 96147c6ae99SBarry Smith . dm - the packer object 96247c6ae99SBarry Smith 96347c6ae99SBarry Smith Output Parameters: 96447c6ae99SBarry Smith . is - the array of index sets 96547c6ae99SBarry Smith 96647c6ae99SBarry Smith Level: advanced 96747c6ae99SBarry Smith 96847c6ae99SBarry Smith Notes: 96947c6ae99SBarry Smith The is entries should be destroyed with ISDestroy(), the is array should be freed with PetscFree() 97047c6ae99SBarry Smith 97147c6ae99SBarry Smith These could be used to extract a subset of vector entries for a "multi-physics" preconditioner 97247c6ae99SBarry Smith 9736eb61c8cSJed Brown Use DMCompositeGetLocalISs() for index sets in the packed local numbering, and 9746eb61c8cSJed Brown DMCompositeGetISLocalToGlobalMappings() for to map local sub-DM (including ghost) indices to packed global 9756eb61c8cSJed Brown indices. 97647c6ae99SBarry Smith 9770c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 97847c6ae99SBarry Smith DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(), 97947c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries() 98047c6ae99SBarry Smith 98147c6ae99SBarry Smith @*/ 9826eb61c8cSJed Brown 9837087cfbeSBarry Smith PetscErrorCode DMCompositeGetGlobalISs(DM dm,IS *is[]) 98447c6ae99SBarry Smith { 98547c6ae99SBarry Smith PetscErrorCode ierr; 98647c6ae99SBarry Smith PetscInt cnt = 0,*idx,i; 98747c6ae99SBarry Smith struct DMCompositeLink *next; 98847c6ae99SBarry Smith PetscMPIInt rank; 98947c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 99047c6ae99SBarry Smith 99147c6ae99SBarry Smith PetscFunctionBegin; 99247c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 99306ebdd98SJed Brown ierr = PetscMalloc((com->nDM+com->nredundant)*sizeof(IS),is);CHKERRQ(ierr); 99447c6ae99SBarry Smith next = com->next; 99547c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 99647c6ae99SBarry Smith 99747c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 99847c6ae99SBarry Smith while (next) { 99947c6ae99SBarry Smith ierr = PetscMalloc(next->n*sizeof(PetscInt),&idx);CHKERRQ(ierr); 100047c6ae99SBarry Smith for (i=0; i<next->n; i++) idx[i] = next->grstart + i; 100147c6ae99SBarry Smith ierr = ISCreateGeneral(((PetscObject)dm)->comm,next->n,idx,PETSC_OWN_POINTER,&(*is)[cnt]);CHKERRQ(ierr); 100247c6ae99SBarry Smith cnt++; 100347c6ae99SBarry Smith next = next->next; 100447c6ae99SBarry Smith } 100547c6ae99SBarry Smith PetscFunctionReturn(0); 100647c6ae99SBarry Smith } 100747c6ae99SBarry Smith 100847c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 100947c6ae99SBarry Smith #undef __FUNCT__ 101047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors_Array" 101147c6ae99SBarry Smith PetscErrorCode DMCompositeGetLocalVectors_Array(DM dm,struct DMCompositeLink *mine,PetscScalar **array) 101247c6ae99SBarry Smith { 101347c6ae99SBarry Smith PetscErrorCode ierr; 101447c6ae99SBarry Smith PetscFunctionBegin; 101547c6ae99SBarry Smith if (array) { 1016c72eef85SJed Brown ierr = PetscMalloc(mine->nlocal*sizeof(PetscScalar),array);CHKERRQ(ierr); 101747c6ae99SBarry Smith } 101847c6ae99SBarry Smith PetscFunctionReturn(0); 101947c6ae99SBarry Smith } 102047c6ae99SBarry Smith 102147c6ae99SBarry Smith #undef __FUNCT__ 102247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors_DM" 102347c6ae99SBarry Smith PetscErrorCode DMCompositeGetLocalVectors_DM(DM dm,struct DMCompositeLink *mine,Vec *local) 102447c6ae99SBarry Smith { 102547c6ae99SBarry Smith PetscErrorCode ierr; 102647c6ae99SBarry Smith PetscFunctionBegin; 102747c6ae99SBarry Smith if (local) { 102847c6ae99SBarry Smith ierr = DMGetLocalVector(mine->dm,local);CHKERRQ(ierr); 102947c6ae99SBarry Smith } 103047c6ae99SBarry Smith PetscFunctionReturn(0); 103147c6ae99SBarry Smith } 103247c6ae99SBarry Smith 103347c6ae99SBarry Smith #undef __FUNCT__ 103447c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors_Array" 103547c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreLocalVectors_Array(DM dm,struct DMCompositeLink *mine,PetscScalar **array) 103647c6ae99SBarry Smith { 103747c6ae99SBarry Smith PetscErrorCode ierr; 103847c6ae99SBarry Smith PetscFunctionBegin; 103947c6ae99SBarry Smith if (array) { 104047c6ae99SBarry Smith ierr = PetscFree(*array);CHKERRQ(ierr); 104147c6ae99SBarry Smith } 104247c6ae99SBarry Smith PetscFunctionReturn(0); 104347c6ae99SBarry Smith } 104447c6ae99SBarry Smith 104547c6ae99SBarry Smith #undef __FUNCT__ 104647c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors_DM" 104747c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreLocalVectors_DM(DM dm,struct DMCompositeLink *mine,Vec *local) 104847c6ae99SBarry Smith { 104947c6ae99SBarry Smith PetscErrorCode ierr; 105047c6ae99SBarry Smith PetscFunctionBegin; 105147c6ae99SBarry Smith if (local) { 105247c6ae99SBarry Smith ierr = DMRestoreLocalVector(mine->dm,local);CHKERRQ(ierr); 105347c6ae99SBarry Smith } 105447c6ae99SBarry Smith PetscFunctionReturn(0); 105547c6ae99SBarry Smith } 105647c6ae99SBarry Smith 105747c6ae99SBarry Smith #undef __FUNCT__ 105847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors" 105947c6ae99SBarry Smith /*@C 106047c6ae99SBarry Smith DMCompositeGetLocalVectors - Gets local vectors and arrays for each part of a DMComposite. 106147c6ae99SBarry Smith Use DMCompositeRestoreLocalVectors() to return them. 106247c6ae99SBarry Smith 106347c6ae99SBarry Smith Not Collective 106447c6ae99SBarry Smith 106547c6ae99SBarry Smith Input Parameter: 106647c6ae99SBarry Smith . dm - the packer object 106747c6ae99SBarry Smith 106847c6ae99SBarry Smith Output Parameter: 106947c6ae99SBarry Smith . ... - the individual sequential objects (arrays or vectors) 107047c6ae99SBarry Smith 107147c6ae99SBarry Smith Level: advanced 107247c6ae99SBarry Smith 10730c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 10746eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 107547c6ae99SBarry Smith DMCompositeRestoreLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries() 107647c6ae99SBarry Smith 107747c6ae99SBarry Smith @*/ 10787087cfbeSBarry Smith PetscErrorCode DMCompositeGetLocalVectors(DM dm,...) 107947c6ae99SBarry Smith { 108047c6ae99SBarry Smith va_list Argp; 108147c6ae99SBarry Smith PetscErrorCode ierr; 108247c6ae99SBarry Smith struct DMCompositeLink *next; 108347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 108447c6ae99SBarry Smith 108547c6ae99SBarry Smith PetscFunctionBegin; 108647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 108747c6ae99SBarry Smith next = com->next; 108847c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 108947c6ae99SBarry Smith va_start(Argp,dm); 109047c6ae99SBarry Smith while (next) { 109147c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 109247c6ae99SBarry Smith PetscScalar **array; 109347c6ae99SBarry Smith array = va_arg(Argp, PetscScalar**); 109447c6ae99SBarry Smith ierr = DMCompositeGetLocalVectors_Array(dm,next,array);CHKERRQ(ierr); 109547c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 109647c6ae99SBarry Smith Vec *vec; 109747c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 109847c6ae99SBarry Smith ierr = DMCompositeGetLocalVectors_DM(dm,next,vec);CHKERRQ(ierr); 109947c6ae99SBarry Smith } else { 110047c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 110147c6ae99SBarry Smith } 110247c6ae99SBarry Smith next = next->next; 110347c6ae99SBarry Smith } 110447c6ae99SBarry Smith va_end(Argp); 110547c6ae99SBarry Smith PetscFunctionReturn(0); 110647c6ae99SBarry Smith } 110747c6ae99SBarry Smith 110847c6ae99SBarry Smith #undef __FUNCT__ 110947c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors" 111047c6ae99SBarry Smith /*@C 111147c6ae99SBarry Smith DMCompositeRestoreLocalVectors - Restores local vectors and arrays for each part of a DMComposite. 111247c6ae99SBarry Smith 111347c6ae99SBarry Smith Not Collective 111447c6ae99SBarry Smith 111547c6ae99SBarry Smith Input Parameter: 111647c6ae99SBarry Smith . dm - the packer object 111747c6ae99SBarry Smith 111847c6ae99SBarry Smith Output Parameter: 111947c6ae99SBarry Smith . ... - the individual sequential objects (arrays or vectors) 112047c6ae99SBarry Smith 112147c6ae99SBarry Smith Level: advanced 112247c6ae99SBarry Smith 11230c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 11246eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 112547c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries() 112647c6ae99SBarry Smith 112747c6ae99SBarry Smith @*/ 11287087cfbeSBarry Smith PetscErrorCode DMCompositeRestoreLocalVectors(DM dm,...) 112947c6ae99SBarry Smith { 113047c6ae99SBarry Smith va_list Argp; 113147c6ae99SBarry Smith PetscErrorCode ierr; 113247c6ae99SBarry Smith struct DMCompositeLink *next; 113347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 113447c6ae99SBarry Smith 113547c6ae99SBarry Smith PetscFunctionBegin; 113647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 113747c6ae99SBarry Smith next = com->next; 113847c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 113947c6ae99SBarry Smith va_start(Argp,dm); 114047c6ae99SBarry Smith while (next) { 114147c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 114247c6ae99SBarry Smith PetscScalar **array; 114347c6ae99SBarry Smith array = va_arg(Argp, PetscScalar**); 114447c6ae99SBarry Smith ierr = DMCompositeRestoreLocalVectors_Array(dm,next,array);CHKERRQ(ierr); 114547c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 114647c6ae99SBarry Smith Vec *vec; 114747c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 114847c6ae99SBarry Smith ierr = DMCompositeRestoreLocalVectors_DM(dm,next,vec);CHKERRQ(ierr); 114947c6ae99SBarry Smith } else { 115047c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 115147c6ae99SBarry Smith } 115247c6ae99SBarry Smith next = next->next; 115347c6ae99SBarry Smith } 115447c6ae99SBarry Smith va_end(Argp); 115547c6ae99SBarry Smith PetscFunctionReturn(0); 115647c6ae99SBarry Smith } 115747c6ae99SBarry Smith 115847c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 115947c6ae99SBarry Smith #undef __FUNCT__ 116047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries_Array" 116147c6ae99SBarry Smith PetscErrorCode DMCompositeGetEntries_Array(DM dm,struct DMCompositeLink *mine,PetscInt *n) 116247c6ae99SBarry Smith { 116347c6ae99SBarry Smith PetscFunctionBegin; 116406ebdd98SJed Brown if (n) *n = mine->nlocal; 116547c6ae99SBarry Smith PetscFunctionReturn(0); 116647c6ae99SBarry Smith } 116747c6ae99SBarry Smith 116847c6ae99SBarry Smith #undef __FUNCT__ 116947c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries_DM" 117047c6ae99SBarry Smith PetscErrorCode DMCompositeGetEntries_DM(DM dmi,struct DMCompositeLink *mine,DM *dm) 117147c6ae99SBarry Smith { 117247c6ae99SBarry Smith PetscFunctionBegin; 117347c6ae99SBarry Smith if (dm) *dm = mine->dm; 117447c6ae99SBarry Smith PetscFunctionReturn(0); 117547c6ae99SBarry Smith } 117647c6ae99SBarry Smith 117747c6ae99SBarry Smith #undef __FUNCT__ 117847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries" 117947c6ae99SBarry Smith /*@C 1180aa219208SBarry Smith DMCompositeGetEntries - Gets the DM, redundant size, etc for each entry in a DMComposite. 118147c6ae99SBarry Smith 118247c6ae99SBarry Smith Not Collective 118347c6ae99SBarry Smith 118447c6ae99SBarry Smith Input Parameter: 118547c6ae99SBarry Smith . dm - the packer object 118647c6ae99SBarry Smith 118747c6ae99SBarry Smith Output Parameter: 1188aa219208SBarry Smith . ... - the individual entries, DMs or integer sizes) 118947c6ae99SBarry Smith 119047c6ae99SBarry Smith Level: advanced 119147c6ae99SBarry Smith 11920c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 11936eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 119447c6ae99SBarry Smith DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(), DMCompositeScatter(), 119547c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors() 119647c6ae99SBarry Smith 119747c6ae99SBarry Smith @*/ 11987087cfbeSBarry Smith PetscErrorCode DMCompositeGetEntries(DM dm,...) 119947c6ae99SBarry Smith { 120047c6ae99SBarry Smith va_list Argp; 120147c6ae99SBarry Smith PetscErrorCode ierr; 120247c6ae99SBarry Smith struct DMCompositeLink *next; 120347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 120447c6ae99SBarry Smith 120547c6ae99SBarry Smith PetscFunctionBegin; 120647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 120747c6ae99SBarry Smith next = com->next; 120847c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 120947c6ae99SBarry Smith va_start(Argp,dm); 121047c6ae99SBarry Smith while (next) { 121147c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 121247c6ae99SBarry Smith PetscInt *n; 121347c6ae99SBarry Smith n = va_arg(Argp, PetscInt*); 121447c6ae99SBarry Smith ierr = DMCompositeGetEntries_Array(dm,next,n);CHKERRQ(ierr); 121547c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 121647c6ae99SBarry Smith DM *dmn; 121747c6ae99SBarry Smith dmn = va_arg(Argp, DM*); 121847c6ae99SBarry Smith ierr = DMCompositeGetEntries_DM(dm,next,dmn);CHKERRQ(ierr); 121947c6ae99SBarry Smith } else { 122047c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 122147c6ae99SBarry Smith } 122247c6ae99SBarry Smith next = next->next; 122347c6ae99SBarry Smith } 122447c6ae99SBarry Smith va_end(Argp); 122547c6ae99SBarry Smith PetscFunctionReturn(0); 122647c6ae99SBarry Smith } 122747c6ae99SBarry Smith 122847c6ae99SBarry Smith #undef __FUNCT__ 12290c010503SBarry Smith #define __FUNCT__ "DMRefine_Composite" 12307087cfbeSBarry Smith PetscErrorCode DMRefine_Composite(DM dmi,MPI_Comm comm,DM *fine) 123147c6ae99SBarry Smith { 123247c6ae99SBarry Smith PetscErrorCode ierr; 123347c6ae99SBarry Smith struct DMCompositeLink *next; 123447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dmi->data; 123547c6ae99SBarry Smith DM dm; 123647c6ae99SBarry Smith 123747c6ae99SBarry Smith PetscFunctionBegin; 123847c6ae99SBarry Smith PetscValidHeaderSpecific(dmi,DM_CLASSID,1); 123947c6ae99SBarry Smith next = com->next; 124047c6ae99SBarry Smith ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr); 124147c6ae99SBarry Smith 124247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 124347c6ae99SBarry Smith while (next) { 124447c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 124506ebdd98SJed Brown ierr = DMCompositeAddArray(*fine,next->rank,next->nlocal);CHKERRQ(ierr); 124647c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 124747c6ae99SBarry Smith ierr = DMRefine(next->dm,comm,&dm);CHKERRQ(ierr); 124847c6ae99SBarry Smith ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr); 124947c6ae99SBarry Smith ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr); 125047c6ae99SBarry Smith } else { 125147c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 125247c6ae99SBarry Smith } 125347c6ae99SBarry Smith next = next->next; 125447c6ae99SBarry Smith } 125547c6ae99SBarry Smith PetscFunctionReturn(0); 125647c6ae99SBarry Smith } 125747c6ae99SBarry Smith 1258c6db04a5SJed Brown #include <petscmat.h> 125947c6ae99SBarry Smith 126047c6ae99SBarry Smith struct MatPackLink { 126147c6ae99SBarry Smith Mat A; 126247c6ae99SBarry Smith struct MatPackLink *next; 126347c6ae99SBarry Smith }; 126447c6ae99SBarry Smith 126547c6ae99SBarry Smith struct MatPack { 126647c6ae99SBarry Smith DM right,left; 126747c6ae99SBarry Smith struct MatPackLink *next; 126847c6ae99SBarry Smith }; 126947c6ae99SBarry Smith 127047c6ae99SBarry Smith #undef __FUNCT__ 127147c6ae99SBarry Smith #define __FUNCT__ "MatMultBoth_Shell_Pack" 127247c6ae99SBarry Smith PetscErrorCode MatMultBoth_Shell_Pack(Mat A,Vec x,Vec y,PetscBool add) 127347c6ae99SBarry Smith { 127447c6ae99SBarry Smith struct MatPack *mpack; 127547c6ae99SBarry Smith struct DMCompositeLink *xnext,*ynext; 127647c6ae99SBarry Smith struct MatPackLink *anext; 127747c6ae99SBarry Smith PetscScalar *xarray,*yarray; 127847c6ae99SBarry Smith PetscErrorCode ierr; 127947c6ae99SBarry Smith PetscInt i; 128047c6ae99SBarry Smith Vec xglobal,yglobal; 128147c6ae99SBarry Smith PetscMPIInt rank; 128247c6ae99SBarry Smith DM_Composite *comright; 128347c6ae99SBarry Smith DM_Composite *comleft; 128447c6ae99SBarry Smith 128547c6ae99SBarry Smith PetscFunctionBegin; 128647c6ae99SBarry Smith ierr = MatShellGetContext(A,(void**)&mpack);CHKERRQ(ierr); 128747c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)mpack->right)->comm,&rank);CHKERRQ(ierr); 128847c6ae99SBarry Smith comright = (DM_Composite*)mpack->right->data; 128947c6ae99SBarry Smith comleft = (DM_Composite*)mpack->left->data; 129047c6ae99SBarry Smith xnext = comright->next; 129147c6ae99SBarry Smith ynext = comleft->next; 129247c6ae99SBarry Smith anext = mpack->next; 129347c6ae99SBarry Smith 129447c6ae99SBarry Smith while (xnext) { 129547c6ae99SBarry Smith if (xnext->type == DMCOMPOSITE_ARRAY) { 129647c6ae99SBarry Smith if (rank == xnext->rank) { 129747c6ae99SBarry Smith ierr = VecGetArray(x,&xarray);CHKERRQ(ierr); 129847c6ae99SBarry Smith ierr = VecGetArray(y,&yarray);CHKERRQ(ierr); 129947c6ae99SBarry Smith if (add) { 130047c6ae99SBarry Smith for (i=0; i<xnext->n; i++) { 130147c6ae99SBarry Smith yarray[ynext->rstart+i] += xarray[xnext->rstart+i]; 130247c6ae99SBarry Smith } 130347c6ae99SBarry Smith } else { 130447c6ae99SBarry Smith ierr = PetscMemcpy(yarray+ynext->rstart,xarray+xnext->rstart,xnext->n*sizeof(PetscScalar));CHKERRQ(ierr); 130547c6ae99SBarry Smith } 130647c6ae99SBarry Smith ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr); 130747c6ae99SBarry Smith ierr = VecRestoreArray(y,&yarray);CHKERRQ(ierr); 130847c6ae99SBarry Smith } 130947c6ae99SBarry Smith } else if (xnext->type == DMCOMPOSITE_DM) { 131047c6ae99SBarry Smith ierr = VecGetArray(x,&xarray);CHKERRQ(ierr); 131147c6ae99SBarry Smith ierr = VecGetArray(y,&yarray);CHKERRQ(ierr); 131247c6ae99SBarry Smith ierr = DMGetGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr); 131347c6ae99SBarry Smith ierr = DMGetGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr); 131447c6ae99SBarry Smith ierr = VecPlaceArray(xglobal,xarray+xnext->rstart);CHKERRQ(ierr); 131547c6ae99SBarry Smith ierr = VecPlaceArray(yglobal,yarray+ynext->rstart);CHKERRQ(ierr); 131647c6ae99SBarry Smith if (add) { 131747c6ae99SBarry Smith ierr = MatMultAdd(anext->A,xglobal,yglobal,yglobal);CHKERRQ(ierr); 131847c6ae99SBarry Smith } else { 131947c6ae99SBarry Smith ierr = MatMult(anext->A,xglobal,yglobal);CHKERRQ(ierr); 132047c6ae99SBarry Smith } 132147c6ae99SBarry Smith ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr); 132247c6ae99SBarry Smith ierr = VecRestoreArray(y,&yarray);CHKERRQ(ierr); 132347c6ae99SBarry Smith ierr = VecResetArray(xglobal);CHKERRQ(ierr); 132447c6ae99SBarry Smith ierr = VecResetArray(yglobal);CHKERRQ(ierr); 132547c6ae99SBarry Smith ierr = DMRestoreGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr); 132647c6ae99SBarry Smith ierr = DMRestoreGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr); 132747c6ae99SBarry Smith anext = anext->next; 132847c6ae99SBarry Smith } else { 132947c6ae99SBarry Smith SETERRQ(((PetscObject)A)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 133047c6ae99SBarry Smith } 133147c6ae99SBarry Smith xnext = xnext->next; 133247c6ae99SBarry Smith ynext = ynext->next; 133347c6ae99SBarry Smith } 133447c6ae99SBarry Smith PetscFunctionReturn(0); 133547c6ae99SBarry Smith } 133647c6ae99SBarry Smith 133747c6ae99SBarry Smith #undef __FUNCT__ 133847c6ae99SBarry Smith #define __FUNCT__ "MatMultAdd_Shell_Pack" 133947c6ae99SBarry Smith PetscErrorCode MatMultAdd_Shell_Pack(Mat A,Vec x,Vec y,Vec z) 134047c6ae99SBarry Smith { 134147c6ae99SBarry Smith PetscErrorCode ierr; 134247c6ae99SBarry Smith PetscFunctionBegin; 134347c6ae99SBarry Smith if (z != y) SETERRQ(((PetscObject)A)->comm,PETSC_ERR_SUP,"Handles y == z only"); 134447c6ae99SBarry Smith ierr = MatMultBoth_Shell_Pack(A,x,y,PETSC_TRUE);CHKERRQ(ierr); 134547c6ae99SBarry Smith PetscFunctionReturn(0); 134647c6ae99SBarry Smith } 134747c6ae99SBarry Smith 134847c6ae99SBarry Smith #undef __FUNCT__ 134947c6ae99SBarry Smith #define __FUNCT__ "MatMult_Shell_Pack" 135047c6ae99SBarry Smith PetscErrorCode MatMult_Shell_Pack(Mat A,Vec x,Vec y) 135147c6ae99SBarry Smith { 135247c6ae99SBarry Smith PetscErrorCode ierr; 135347c6ae99SBarry Smith PetscFunctionBegin; 135447c6ae99SBarry Smith ierr = MatMultBoth_Shell_Pack(A,x,y,PETSC_FALSE);CHKERRQ(ierr); 135547c6ae99SBarry Smith PetscFunctionReturn(0); 135647c6ae99SBarry Smith } 135747c6ae99SBarry Smith 135847c6ae99SBarry Smith #undef __FUNCT__ 135947c6ae99SBarry Smith #define __FUNCT__ "MatMultTranspose_Shell_Pack" 136047c6ae99SBarry Smith PetscErrorCode MatMultTranspose_Shell_Pack(Mat A,Vec x,Vec y) 136147c6ae99SBarry Smith { 136247c6ae99SBarry Smith struct MatPack *mpack; 136347c6ae99SBarry Smith struct DMCompositeLink *xnext,*ynext; 136447c6ae99SBarry Smith struct MatPackLink *anext; 136547c6ae99SBarry Smith PetscScalar *xarray,*yarray; 136647c6ae99SBarry Smith PetscErrorCode ierr; 136747c6ae99SBarry Smith Vec xglobal,yglobal; 136847c6ae99SBarry Smith PetscMPIInt rank; 136947c6ae99SBarry Smith DM_Composite *comright; 137047c6ae99SBarry Smith DM_Composite *comleft; 137147c6ae99SBarry Smith 137247c6ae99SBarry Smith PetscFunctionBegin; 137347c6ae99SBarry Smith ierr = MatShellGetContext(A,(void**)&mpack);CHKERRQ(ierr); 137447c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)mpack->right)->comm,&rank);CHKERRQ(ierr); 137547c6ae99SBarry Smith comright = (DM_Composite*)mpack->right->data; 137647c6ae99SBarry Smith comleft = (DM_Composite*)mpack->left->data; 137747c6ae99SBarry Smith ynext = comright->next; 137847c6ae99SBarry Smith xnext = comleft->next; 137947c6ae99SBarry Smith anext = mpack->next; 138047c6ae99SBarry Smith 138147c6ae99SBarry Smith while (xnext) { 138247c6ae99SBarry Smith if (xnext->type == DMCOMPOSITE_ARRAY) { 138347c6ae99SBarry Smith if (rank == ynext->rank) { 138447c6ae99SBarry Smith ierr = VecGetArray(x,&xarray);CHKERRQ(ierr); 138547c6ae99SBarry Smith ierr = VecGetArray(y,&yarray);CHKERRQ(ierr); 138647c6ae99SBarry Smith ierr = PetscMemcpy(yarray+ynext->rstart,xarray+xnext->rstart,xnext->n*sizeof(PetscScalar));CHKERRQ(ierr); 138747c6ae99SBarry Smith ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr); 138847c6ae99SBarry Smith ierr = VecRestoreArray(y,&yarray);CHKERRQ(ierr); 138947c6ae99SBarry Smith } 139047c6ae99SBarry Smith } else if (xnext->type == DMCOMPOSITE_DM) { 139147c6ae99SBarry Smith ierr = VecGetArray(x,&xarray);CHKERRQ(ierr); 139247c6ae99SBarry Smith ierr = VecGetArray(y,&yarray);CHKERRQ(ierr); 139347c6ae99SBarry Smith ierr = DMGetGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr); 139447c6ae99SBarry Smith ierr = DMGetGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr); 139547c6ae99SBarry Smith ierr = VecPlaceArray(xglobal,xarray+xnext->rstart);CHKERRQ(ierr); 139647c6ae99SBarry Smith ierr = VecPlaceArray(yglobal,yarray+ynext->rstart);CHKERRQ(ierr); 139747c6ae99SBarry Smith ierr = MatMultTranspose(anext->A,xglobal,yglobal);CHKERRQ(ierr); 139847c6ae99SBarry Smith ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr); 139947c6ae99SBarry Smith ierr = VecRestoreArray(y,&yarray);CHKERRQ(ierr); 140047c6ae99SBarry Smith ierr = VecResetArray(xglobal);CHKERRQ(ierr); 140147c6ae99SBarry Smith ierr = VecResetArray(yglobal);CHKERRQ(ierr); 140247c6ae99SBarry Smith ierr = DMRestoreGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr); 140347c6ae99SBarry Smith ierr = DMRestoreGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr); 140447c6ae99SBarry Smith anext = anext->next; 140547c6ae99SBarry Smith } else { 140647c6ae99SBarry Smith SETERRQ(((PetscObject)A)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 140747c6ae99SBarry Smith } 140847c6ae99SBarry Smith xnext = xnext->next; 140947c6ae99SBarry Smith ynext = ynext->next; 141047c6ae99SBarry Smith } 141147c6ae99SBarry Smith PetscFunctionReturn(0); 141247c6ae99SBarry Smith } 141347c6ae99SBarry Smith 141447c6ae99SBarry Smith #undef __FUNCT__ 141547c6ae99SBarry Smith #define __FUNCT__ "MatDestroy_Shell_Pack" 141647c6ae99SBarry Smith PetscErrorCode MatDestroy_Shell_Pack(Mat A) 141747c6ae99SBarry Smith { 141847c6ae99SBarry Smith struct MatPack *mpack; 141947c6ae99SBarry Smith struct MatPackLink *anext,*oldanext; 142047c6ae99SBarry Smith PetscErrorCode ierr; 142147c6ae99SBarry Smith 142247c6ae99SBarry Smith PetscFunctionBegin; 142347c6ae99SBarry Smith ierr = MatShellGetContext(A,(void**)&mpack);CHKERRQ(ierr); 142447c6ae99SBarry Smith anext = mpack->next; 142547c6ae99SBarry Smith 142647c6ae99SBarry Smith while (anext) { 1427fcfd50ebSBarry Smith ierr = MatDestroy(&anext->A);CHKERRQ(ierr); 142847c6ae99SBarry Smith oldanext = anext; 142947c6ae99SBarry Smith anext = anext->next; 143047c6ae99SBarry Smith ierr = PetscFree(oldanext);CHKERRQ(ierr); 143147c6ae99SBarry Smith } 143247c6ae99SBarry Smith ierr = PetscFree(mpack);CHKERRQ(ierr); 143347c6ae99SBarry Smith ierr = PetscObjectChangeTypeName((PetscObject)A,0);CHKERRQ(ierr); 143447c6ae99SBarry Smith PetscFunctionReturn(0); 143547c6ae99SBarry Smith } 143647c6ae99SBarry Smith 143747c6ae99SBarry Smith #undef __FUNCT__ 14380c010503SBarry Smith #define __FUNCT__ "DMGetInterpolation_Composite" 14397087cfbeSBarry Smith PetscErrorCode DMGetInterpolation_Composite(DM coarse,DM fine,Mat *A,Vec *v) 144047c6ae99SBarry Smith { 144147c6ae99SBarry Smith PetscErrorCode ierr; 144247c6ae99SBarry Smith PetscInt m,n,M,N; 144347c6ae99SBarry Smith struct DMCompositeLink *nextc; 144447c6ae99SBarry Smith struct DMCompositeLink *nextf; 144547c6ae99SBarry Smith struct MatPackLink *nextmat,*pnextmat = 0; 144647c6ae99SBarry Smith struct MatPack *mpack; 144747c6ae99SBarry Smith Vec gcoarse,gfine; 144847c6ae99SBarry Smith DM_Composite *comcoarse = (DM_Composite*)coarse->data; 144947c6ae99SBarry Smith DM_Composite *comfine = (DM_Composite*)fine->data; 145047c6ae99SBarry Smith 145147c6ae99SBarry Smith PetscFunctionBegin; 145247c6ae99SBarry Smith PetscValidHeaderSpecific(coarse,DM_CLASSID,1); 145347c6ae99SBarry Smith PetscValidHeaderSpecific(fine,DM_CLASSID,2); 145447c6ae99SBarry Smith nextc = comcoarse->next; 145547c6ae99SBarry Smith nextf = comfine->next; 145647c6ae99SBarry Smith /* use global vectors only for determining matrix layout */ 14570c010503SBarry Smith ierr = DMCreateGlobalVector(coarse,&gcoarse);CHKERRQ(ierr); 14580c010503SBarry Smith ierr = DMCreateGlobalVector(fine,&gfine);CHKERRQ(ierr); 145947c6ae99SBarry Smith ierr = VecGetLocalSize(gcoarse,&n);CHKERRQ(ierr); 146047c6ae99SBarry Smith ierr = VecGetLocalSize(gfine,&m);CHKERRQ(ierr); 146147c6ae99SBarry Smith ierr = VecGetSize(gcoarse,&N);CHKERRQ(ierr); 146247c6ae99SBarry Smith ierr = VecGetSize(gfine,&M);CHKERRQ(ierr); 1463fcfd50ebSBarry Smith ierr = VecDestroy(&gcoarse);CHKERRQ(ierr); 1464fcfd50ebSBarry Smith ierr = VecDestroy(&gfine);CHKERRQ(ierr); 146547c6ae99SBarry Smith 146647c6ae99SBarry Smith ierr = PetscNew(struct MatPack,&mpack);CHKERRQ(ierr); 146747c6ae99SBarry Smith mpack->right = coarse; 146847c6ae99SBarry Smith mpack->left = fine; 146947c6ae99SBarry Smith ierr = MatCreate(((PetscObject)fine)->comm,A);CHKERRQ(ierr); 147047c6ae99SBarry Smith ierr = MatSetSizes(*A,m,n,M,N);CHKERRQ(ierr); 147147c6ae99SBarry Smith ierr = MatSetType(*A,MATSHELL);CHKERRQ(ierr); 147247c6ae99SBarry Smith ierr = MatShellSetContext(*A,mpack);CHKERRQ(ierr); 147347c6ae99SBarry Smith ierr = MatShellSetOperation(*A,MATOP_MULT,(void(*)(void))MatMult_Shell_Pack);CHKERRQ(ierr); 147447c6ae99SBarry Smith ierr = MatShellSetOperation(*A,MATOP_MULT_TRANSPOSE,(void(*)(void))MatMultTranspose_Shell_Pack);CHKERRQ(ierr); 147547c6ae99SBarry Smith ierr = MatShellSetOperation(*A,MATOP_MULT_ADD,(void(*)(void))MatMultAdd_Shell_Pack);CHKERRQ(ierr); 147647c6ae99SBarry Smith ierr = MatShellSetOperation(*A,MATOP_DESTROY,(void(*)(void))MatDestroy_Shell_Pack);CHKERRQ(ierr); 147747c6ae99SBarry Smith 147847c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 147947c6ae99SBarry Smith while (nextc) { 148047c6ae99SBarry Smith if (nextc->type != nextf->type) SETERRQ(((PetscObject)fine)->comm,PETSC_ERR_ARG_INCOMP,"Two DM have different layout"); 148147c6ae99SBarry Smith 148247c6ae99SBarry Smith if (nextc->type == DMCOMPOSITE_ARRAY) { 148347c6ae99SBarry Smith ; 148447c6ae99SBarry Smith } else if (nextc->type == DMCOMPOSITE_DM) { 148547c6ae99SBarry Smith ierr = PetscNew(struct MatPackLink,&nextmat);CHKERRQ(ierr); 148647c6ae99SBarry Smith nextmat->next = 0; 148747c6ae99SBarry Smith if (pnextmat) { 148847c6ae99SBarry Smith pnextmat->next = nextmat; 148947c6ae99SBarry Smith pnextmat = nextmat; 149047c6ae99SBarry Smith } else { 149147c6ae99SBarry Smith pnextmat = nextmat; 149247c6ae99SBarry Smith mpack->next = nextmat; 149347c6ae99SBarry Smith } 149447c6ae99SBarry Smith ierr = DMGetInterpolation(nextc->dm,nextf->dm,&nextmat->A,PETSC_NULL);CHKERRQ(ierr); 149547c6ae99SBarry Smith } else { 149647c6ae99SBarry Smith SETERRQ(((PetscObject)fine)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 149747c6ae99SBarry Smith } 149847c6ae99SBarry Smith nextc = nextc->next; 149947c6ae99SBarry Smith nextf = nextf->next; 150047c6ae99SBarry Smith } 150147c6ae99SBarry Smith PetscFunctionReturn(0); 150247c6ae99SBarry Smith } 150347c6ae99SBarry Smith 150447c6ae99SBarry Smith #undef __FUNCT__ 15051411c6eeSJed Brown #define __FUNCT__ "DMCreateLocalToGlobalMapping_Composite" 15061411c6eeSJed Brown static PetscErrorCode DMCreateLocalToGlobalMapping_Composite(DM dm) 15071411c6eeSJed Brown { 15081411c6eeSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 15091411c6eeSJed Brown ISLocalToGlobalMapping *ltogs; 1510a03f9cedSJed Brown PetscInt i,cnt,m,*idx; 15111411c6eeSJed Brown PetscErrorCode ierr; 15121411c6eeSJed Brown 15131411c6eeSJed Brown PetscFunctionBegin; 15141411c6eeSJed Brown /* Set the ISLocalToGlobalMapping on the new matrix */ 15151411c6eeSJed Brown ierr = DMCompositeGetISLocalToGlobalMappings(dm,<ogs);CHKERRQ(ierr); 15161411c6eeSJed Brown for (cnt=0,i=0; i<(com->nDM+com->nredundant); i++) { 1517a03f9cedSJed Brown ierr = ISLocalToGlobalMappingGetSize(ltogs[i],&m);CHKERRQ(ierr); 1518a03f9cedSJed Brown cnt += m; 1519a03f9cedSJed Brown } 1520a03f9cedSJed Brown ierr = PetscMalloc(cnt*sizeof(PetscInt),&idx);CHKERRQ(ierr); 1521a03f9cedSJed Brown for (cnt=0,i=0; i<(com->nDM+com->nredundant); i++) { 15221411c6eeSJed Brown const PetscInt *subidx; 15231411c6eeSJed Brown ierr = ISLocalToGlobalMappingGetSize(ltogs[i],&m);CHKERRQ(ierr); 15241411c6eeSJed Brown ierr = ISLocalToGlobalMappingGetIndices(ltogs[i],&subidx);CHKERRQ(ierr); 15251411c6eeSJed Brown ierr = PetscMemcpy(&idx[cnt],subidx,m*sizeof(PetscInt));CHKERRQ(ierr); 15261411c6eeSJed Brown ierr = ISLocalToGlobalMappingRestoreIndices(ltogs[i],&subidx);CHKERRQ(ierr); 15271411c6eeSJed Brown cnt += m; 15281411c6eeSJed Brown } 15291411c6eeSJed Brown ierr = ISLocalToGlobalMappingCreate(((PetscObject)dm)->comm,cnt,idx,PETSC_OWN_POINTER,&dm->ltogmap);CHKERRQ(ierr); 1530fcfd50ebSBarry Smith for (i=0; i<com->nDM+com->nredundant; i++) {ierr = ISLocalToGlobalMappingDestroy(<ogs[i]);CHKERRQ(ierr);} 15311411c6eeSJed Brown ierr = PetscFree(ltogs);CHKERRQ(ierr); 15321411c6eeSJed Brown PetscFunctionReturn(0); 15331411c6eeSJed Brown } 15341411c6eeSJed Brown 15351411c6eeSJed Brown 15361411c6eeSJed Brown #undef __FUNCT__ 15370c010503SBarry Smith #define __FUNCT__ "DMGetColoring_Composite" 15387087cfbeSBarry Smith PetscErrorCode DMGetColoring_Composite(DM dm,ISColoringType ctype,const MatType mtype,ISColoring *coloring) 153947c6ae99SBarry Smith { 154047c6ae99SBarry Smith PetscErrorCode ierr; 154147c6ae99SBarry Smith PetscInt n,i,cnt; 154247c6ae99SBarry Smith ISColoringValue *colors; 154347c6ae99SBarry Smith PetscBool dense = PETSC_FALSE; 154447c6ae99SBarry Smith ISColoringValue maxcol = 0; 154547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 154647c6ae99SBarry Smith 154747c6ae99SBarry Smith PetscFunctionBegin; 154847c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 154947c6ae99SBarry Smith if (ctype == IS_COLORING_GHOSTED) { 155047c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Currently you must use -dmmg_iscoloring_type global" ); 155147c6ae99SBarry Smith } else if (ctype == IS_COLORING_GLOBAL) { 155247c6ae99SBarry Smith n = com->n; 155347c6ae99SBarry Smith } else SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_ARG_OUTOFRANGE,"Unknown ISColoringType"); 155447c6ae99SBarry Smith ierr = PetscMalloc(n*sizeof(ISColoringValue),&colors);CHKERRQ(ierr); /* freed in ISColoringDestroy() */ 155547c6ae99SBarry Smith 1556671f6225SBarry Smith ierr = PetscOptionsGetBool(PETSC_NULL,"-dmcomposite_dense_jacobian",&dense,PETSC_NULL);CHKERRQ(ierr); 155747c6ae99SBarry Smith if (dense) { 155847c6ae99SBarry Smith for (i=0; i<n; i++) { 155947c6ae99SBarry Smith colors[i] = (ISColoringValue)(com->rstart + i); 156047c6ae99SBarry Smith } 156147c6ae99SBarry Smith maxcol = com->N; 156247c6ae99SBarry Smith } else { 156347c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 156447c6ae99SBarry Smith PetscMPIInt rank; 156547c6ae99SBarry Smith 156647c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 156747c6ae99SBarry Smith cnt = 0; 156847c6ae99SBarry Smith while (next) { 156947c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 157047c6ae99SBarry Smith if (rank == next->rank) { /* each column gets is own color */ 157147c6ae99SBarry Smith for (i=com->rstart+next->rstart; i<com->rstart+next->rstart+next->n; i++) { 157247c6ae99SBarry Smith colors[cnt++] = maxcol++; 157347c6ae99SBarry Smith } 157447c6ae99SBarry Smith } 157547c6ae99SBarry Smith ierr = MPI_Bcast(&maxcol,1,MPIU_COLORING_VALUE,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 157647c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 157747c6ae99SBarry Smith ISColoring lcoloring; 157847c6ae99SBarry Smith 157947c6ae99SBarry Smith ierr = DMGetColoring(next->dm,IS_COLORING_GLOBAL,mtype,&lcoloring);CHKERRQ(ierr); 158047c6ae99SBarry Smith for (i=0; i<lcoloring->N; i++) { 158147c6ae99SBarry Smith colors[cnt++] = maxcol + lcoloring->colors[i]; 158247c6ae99SBarry Smith } 158347c6ae99SBarry Smith maxcol += lcoloring->n; 1584fcfd50ebSBarry Smith ierr = ISColoringDestroy(&lcoloring);CHKERRQ(ierr); 158596e147daSBarry Smith } else SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 158647c6ae99SBarry Smith next = next->next; 158747c6ae99SBarry Smith } 158847c6ae99SBarry Smith } 158947c6ae99SBarry Smith ierr = ISColoringCreate(((PetscObject)dm)->comm,maxcol,n,colors,coloring);CHKERRQ(ierr); 159047c6ae99SBarry Smith PetscFunctionReturn(0); 159147c6ae99SBarry Smith } 159247c6ae99SBarry Smith 159347c6ae99SBarry Smith #undef __FUNCT__ 15940c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalBegin_Composite" 15957087cfbeSBarry Smith PetscErrorCode DMGlobalToLocalBegin_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec) 159647c6ae99SBarry Smith { 159747c6ae99SBarry Smith PetscErrorCode ierr; 159847c6ae99SBarry Smith struct DMCompositeLink *next; 159947c6ae99SBarry Smith PetscInt cnt = 3; 160047c6ae99SBarry Smith PetscMPIInt rank; 160147c6ae99SBarry Smith PetscScalar *garray,*larray; 160247c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 160347c6ae99SBarry Smith 160447c6ae99SBarry Smith PetscFunctionBegin; 160547c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 160647c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 160747c6ae99SBarry Smith next = com->next; 160847c6ae99SBarry Smith if (!com->setup) { 1609d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 161047c6ae99SBarry Smith } 161147c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 161247c6ae99SBarry Smith ierr = VecGetArray(gvec,&garray);CHKERRQ(ierr); 161347c6ae99SBarry Smith ierr = VecGetArray(lvec,&larray);CHKERRQ(ierr); 161447c6ae99SBarry Smith 161547c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 161647c6ae99SBarry Smith while (next) { 161747c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 161847c6ae99SBarry Smith if (rank == next->rank) { 161947c6ae99SBarry Smith ierr = PetscMemcpy(larray,garray,next->n*sizeof(PetscScalar));CHKERRQ(ierr); 162047c6ae99SBarry Smith garray += next->n; 162147c6ae99SBarry Smith } 162247c6ae99SBarry Smith /* does not handle ADD_VALUES */ 162306ebdd98SJed Brown ierr = MPI_Bcast(larray,next->nlocal,MPIU_SCALAR,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 162447c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 162547c6ae99SBarry Smith Vec local,global; 162647c6ae99SBarry Smith PetscInt N; 162747c6ae99SBarry Smith 162847c6ae99SBarry Smith ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 162947c6ae99SBarry Smith ierr = VecGetLocalSize(global,&N);CHKERRQ(ierr); 163047c6ae99SBarry Smith ierr = VecPlaceArray(global,garray);CHKERRQ(ierr); 163147c6ae99SBarry Smith ierr = DMGetLocalVector(next->dm,&local);CHKERRQ(ierr); 163247c6ae99SBarry Smith ierr = VecPlaceArray(local,larray);CHKERRQ(ierr); 163347c6ae99SBarry Smith ierr = DMGlobalToLocalBegin(next->dm,global,mode,local);CHKERRQ(ierr); 163447c6ae99SBarry Smith ierr = DMGlobalToLocalEnd(next->dm,global,mode,local);CHKERRQ(ierr); 163547c6ae99SBarry Smith ierr = VecResetArray(global);CHKERRQ(ierr); 163647c6ae99SBarry Smith ierr = VecResetArray(local);CHKERRQ(ierr); 163747c6ae99SBarry Smith ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 163847c6ae99SBarry Smith ierr = DMRestoreGlobalVector(next->dm,&local);CHKERRQ(ierr); 163947c6ae99SBarry Smith } else { 164047c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 164147c6ae99SBarry Smith } 164247c6ae99SBarry Smith cnt++; 164306ebdd98SJed Brown larray += next->nlocal; 164447c6ae99SBarry Smith next = next->next; 164547c6ae99SBarry Smith } 164647c6ae99SBarry Smith 164747c6ae99SBarry Smith ierr = VecRestoreArray(gvec,PETSC_NULL);CHKERRQ(ierr); 164847c6ae99SBarry Smith ierr = VecRestoreArray(lvec,PETSC_NULL);CHKERRQ(ierr); 164947c6ae99SBarry Smith PetscFunctionReturn(0); 165047c6ae99SBarry Smith } 165147c6ae99SBarry Smith 165247c6ae99SBarry Smith #undef __FUNCT__ 16530c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalEnd_Composite" 16547087cfbeSBarry Smith PetscErrorCode DMGlobalToLocalEnd_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec) 16550c010503SBarry Smith { 16560c010503SBarry Smith PetscFunctionBegin; 16570c010503SBarry Smith PetscFunctionReturn(0); 16580c010503SBarry Smith } 165947c6ae99SBarry Smith 1660a4121054SBarry Smith EXTERN_C_BEGIN 1661a4121054SBarry Smith #undef __FUNCT__ 1662a4121054SBarry Smith #define __FUNCT__ "DMCreate_Composite" 16637087cfbeSBarry Smith PetscErrorCode DMCreate_Composite(DM p) 1664a4121054SBarry Smith { 1665a4121054SBarry Smith PetscErrorCode ierr; 1666a4121054SBarry Smith DM_Composite *com; 1667a4121054SBarry Smith 1668a4121054SBarry Smith PetscFunctionBegin; 1669a4121054SBarry Smith ierr = PetscNewLog(p,DM_Composite,&com);CHKERRQ(ierr); 1670a4121054SBarry Smith p->data = com; 1671a4121054SBarry Smith ierr = PetscObjectChangeTypeName((PetscObject)p,"DMComposite");CHKERRQ(ierr); 1672a4121054SBarry Smith com->n = 0; 1673a4121054SBarry Smith com->next = PETSC_NULL; 1674a4121054SBarry Smith com->nredundant = 0; 1675a4121054SBarry Smith com->nDM = 0; 1676a4121054SBarry Smith 1677a4121054SBarry Smith p->ops->createglobalvector = DMCreateGlobalVector_Composite; 1678a4121054SBarry Smith p->ops->createlocalvector = DMCreateLocalVector_Composite; 16791411c6eeSJed Brown p->ops->createlocaltoglobalmapping = DMCreateLocalToGlobalMapping_Composite; 16801411c6eeSJed Brown p->ops->createlocaltoglobalmappingblock = 0; 1681a4121054SBarry Smith p->ops->refine = DMRefine_Composite; 1682a4121054SBarry Smith p->ops->getinterpolation = DMGetInterpolation_Composite; 1683a4121054SBarry Smith p->ops->getmatrix = DMGetMatrix_Composite; 1684a4121054SBarry Smith p->ops->getcoloring = DMGetColoring_Composite; 1685a4121054SBarry Smith p->ops->globaltolocalbegin = DMGlobalToLocalBegin_Composite; 1686a4121054SBarry Smith p->ops->globaltolocalend = DMGlobalToLocalEnd_Composite; 1687a4121054SBarry Smith p->ops->destroy = DMDestroy_Composite; 1688a4121054SBarry Smith p->ops->view = DMView_Composite; 1689a4121054SBarry Smith p->ops->setup = DMSetUp_Composite; 1690a4121054SBarry Smith PetscFunctionReturn(0); 1691a4121054SBarry Smith } 1692a4121054SBarry Smith EXTERN_C_END 1693a4121054SBarry Smith 16940c010503SBarry Smith #undef __FUNCT__ 16950c010503SBarry Smith #define __FUNCT__ "DMCompositeCreate" 16960c010503SBarry Smith /*@C 16970c010503SBarry Smith DMCompositeCreate - Creates a vector packer, used to generate "composite" 16980c010503SBarry Smith vectors made up of several subvectors. 16990c010503SBarry Smith 17000c010503SBarry Smith Collective on MPI_Comm 170147c6ae99SBarry Smith 170247c6ae99SBarry Smith Input Parameter: 17030c010503SBarry Smith . comm - the processors that will share the global vector 17040c010503SBarry Smith 17050c010503SBarry Smith Output Parameters: 17060c010503SBarry Smith . packer - the packer object 170747c6ae99SBarry Smith 170847c6ae99SBarry Smith Level: advanced 170947c6ae99SBarry Smith 17100c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCompositeScatter(), 17116eb61c8cSJed Brown DMCompositeGather(), DMCreateGlobalVector(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess() 171247c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 171347c6ae99SBarry Smith 171447c6ae99SBarry Smith @*/ 17157087cfbeSBarry Smith PetscErrorCode DMCompositeCreate(MPI_Comm comm,DM *packer) 171647c6ae99SBarry Smith { 17170c010503SBarry Smith PetscErrorCode ierr; 17180c010503SBarry Smith 171947c6ae99SBarry Smith PetscFunctionBegin; 17200c010503SBarry Smith PetscValidPointer(packer,2); 1721a4121054SBarry Smith ierr = DMCreate(comm,packer);CHKERRQ(ierr); 1722a4121054SBarry Smith ierr = DMSetType(*packer,DMCOMPOSITE);CHKERRQ(ierr); 172347c6ae99SBarry Smith PetscFunctionReturn(0); 172447c6ae99SBarry Smith } 1725