147c6ae99SBarry Smith 2*3c48a1e8SJed Brown #include "packimpl.h" /*I "petscdmcomposite.h" I*/ 347c6ae99SBarry Smith 447c6ae99SBarry Smith #undef __FUNCT__ 547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeSetCoupling" 647c6ae99SBarry Smith /*@C 747c6ae99SBarry Smith DMCompositeSetCoupling - Sets user provided routines that compute the coupling between the 8aa219208SBarry Smith seperate components (DMDA's and arrays) in a DMto build the correct matrix nonzero structure. 947c6ae99SBarry Smith 1047c6ae99SBarry Smith 1147c6ae99SBarry Smith Logically Collective on MPI_Comm 1247c6ae99SBarry Smith 1347c6ae99SBarry Smith Input Parameter: 1447c6ae99SBarry Smith + dm - the composite object 1547c6ae99SBarry Smith - formcouplelocations - routine to set the nonzero locations in the matrix 1647c6ae99SBarry Smith 1747c6ae99SBarry Smith Level: advanced 1847c6ae99SBarry Smith 1947c6ae99SBarry Smith Notes: See DMCompositeSetContext() and DMCompositeGetContext() for how to get user information into 2047c6ae99SBarry Smith this routine 2147c6ae99SBarry Smith 2247c6ae99SBarry Smith @*/ 237087cfbeSBarry Smith PetscErrorCode DMCompositeSetCoupling(DM dm,PetscErrorCode (*FormCoupleLocations)(DM,Mat,PetscInt*,PetscInt*,PetscInt,PetscInt,PetscInt,PetscInt)) 2447c6ae99SBarry Smith { 2547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 2647c6ae99SBarry Smith 2747c6ae99SBarry Smith PetscFunctionBegin; 2847c6ae99SBarry Smith com->FormCoupleLocations = FormCoupleLocations; 2947c6ae99SBarry Smith PetscFunctionReturn(0); 3047c6ae99SBarry Smith } 3147c6ae99SBarry Smith 3247c6ae99SBarry Smith #undef __FUNCT__ 3347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeSetContext" 3447c6ae99SBarry Smith /*@ 3547c6ae99SBarry Smith DMCompositeSetContext - Allows user to stash data they may need within the form coupling routine they 3647c6ae99SBarry Smith set with DMCompositeSetCoupling() 3747c6ae99SBarry Smith 3847c6ae99SBarry Smith 3947c6ae99SBarry Smith Not Collective 4047c6ae99SBarry Smith 4147c6ae99SBarry Smith Input Parameter: 4247c6ae99SBarry Smith + dm - the composite object 4347c6ae99SBarry Smith - ctx - the user supplied context 4447c6ae99SBarry Smith 4547c6ae99SBarry Smith Level: advanced 4647c6ae99SBarry Smith 4747c6ae99SBarry Smith Notes: Use DMCompositeGetContext() to retrieve the context when needed. 4847c6ae99SBarry Smith 4947c6ae99SBarry Smith @*/ 507087cfbeSBarry Smith PetscErrorCode DMCompositeSetContext(DM dm,void *ctx) 5147c6ae99SBarry Smith { 5247c6ae99SBarry Smith PetscFunctionBegin; 5347c6ae99SBarry Smith dm->ctx = ctx; 5447c6ae99SBarry Smith PetscFunctionReturn(0); 5547c6ae99SBarry Smith } 5647c6ae99SBarry Smith 5747c6ae99SBarry Smith #undef __FUNCT__ 5847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetContext" 5947c6ae99SBarry Smith /*@ 6047c6ae99SBarry Smith DMCompositeGetContext - Access the context set with DMCompositeSetContext() 6147c6ae99SBarry Smith 6247c6ae99SBarry Smith 6347c6ae99SBarry Smith Not Collective 6447c6ae99SBarry Smith 6547c6ae99SBarry Smith Input Parameter: 6647c6ae99SBarry Smith . dm - the composite object 6747c6ae99SBarry Smith 6847c6ae99SBarry Smith Output Parameter: 6947c6ae99SBarry Smith . ctx - the user supplied context 7047c6ae99SBarry Smith 7147c6ae99SBarry Smith Level: advanced 7247c6ae99SBarry Smith 7347c6ae99SBarry Smith Notes: Use DMCompositeGetContext() to retrieve the context when needed. 7447c6ae99SBarry Smith 7547c6ae99SBarry Smith @*/ 767087cfbeSBarry Smith PetscErrorCode DMCompositeGetContext(DM dm,void **ctx) 7747c6ae99SBarry Smith { 7847c6ae99SBarry Smith PetscFunctionBegin; 7947c6ae99SBarry Smith *ctx = dm->ctx; 8047c6ae99SBarry Smith PetscFunctionReturn(0); 8147c6ae99SBarry Smith } 8247c6ae99SBarry Smith 8347c6ae99SBarry Smith 8447c6ae99SBarry Smith 8547c6ae99SBarry Smith extern PetscErrorCode DMDestroy_Private(DM,PetscBool *); 8647c6ae99SBarry Smith 8747c6ae99SBarry Smith #undef __FUNCT__ 880c010503SBarry Smith #define __FUNCT__ "DMDestroy_Composite" 897087cfbeSBarry Smith PetscErrorCode DMDestroy_Composite(DM dm) 9047c6ae99SBarry Smith { 9147c6ae99SBarry Smith PetscErrorCode ierr; 9247c6ae99SBarry Smith struct DMCompositeLink *next, *prev; 9347c6ae99SBarry Smith PetscBool done; 9447c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 9547c6ae99SBarry Smith 9647c6ae99SBarry Smith PetscFunctionBegin; 9747c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 9847c6ae99SBarry Smith ierr = DMDestroy_Private((DM)dm,&done);CHKERRQ(ierr); 9947c6ae99SBarry Smith if (!done) PetscFunctionReturn(0); 10047c6ae99SBarry Smith 10147c6ae99SBarry Smith next = com->next; 10247c6ae99SBarry Smith while (next) { 10347c6ae99SBarry Smith prev = next; 10447c6ae99SBarry Smith next = next->next; 10547c6ae99SBarry Smith if (prev->type == DMCOMPOSITE_DM) { 10647c6ae99SBarry Smith ierr = DMDestroy(prev->dm);CHKERRQ(ierr); 10747c6ae99SBarry Smith } 10847c6ae99SBarry Smith ierr = PetscFree(prev->grstarts);CHKERRQ(ierr); 10947c6ae99SBarry Smith ierr = PetscFree(prev);CHKERRQ(ierr); 11047c6ae99SBarry Smith } 11147c6ae99SBarry Smith ierr = PetscFree(com);CHKERRQ(ierr); 11247c6ae99SBarry Smith ierr = PetscHeaderDestroy(dm);CHKERRQ(ierr); 11347c6ae99SBarry Smith PetscFunctionReturn(0); 11447c6ae99SBarry Smith } 11547c6ae99SBarry Smith 11647c6ae99SBarry Smith #undef __FUNCT__ 1170c010503SBarry Smith #define __FUNCT__ "DMView_Composite" 1187087cfbeSBarry Smith PetscErrorCode DMView_Composite(DM dm,PetscViewer v) 11947c6ae99SBarry Smith { 12047c6ae99SBarry Smith PetscErrorCode ierr; 12147c6ae99SBarry Smith PetscBool iascii; 12247c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 12347c6ae99SBarry Smith 12447c6ae99SBarry Smith PetscFunctionBegin; 12547c6ae99SBarry Smith ierr = PetscTypeCompare((PetscObject)v,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 12647c6ae99SBarry Smith if (iascii) { 12747c6ae99SBarry Smith struct DMCompositeLink *lnk = com->next; 12847c6ae99SBarry Smith PetscInt i; 12947c6ae99SBarry Smith 13047c6ae99SBarry Smith ierr = PetscViewerASCIIPrintf(v,"DM (%s)\n",((PetscObject)dm)->prefix?((PetscObject)dm)->prefix:"no prefix");CHKERRQ(ierr); 13147c6ae99SBarry Smith ierr = PetscViewerASCIIPrintf(v," contains %d DMs and %d redundant arrays\n",com->nDM,com->nredundant);CHKERRQ(ierr); 13247c6ae99SBarry Smith ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr); 13347c6ae99SBarry Smith for (i=0; lnk; lnk=lnk->next,i++) { 13447c6ae99SBarry Smith if (lnk->dm) { 13547c6ae99SBarry Smith ierr = PetscViewerASCIIPrintf(v,"Link %d: DM of type %s\n",i,((PetscObject)lnk->dm)->type_name);CHKERRQ(ierr); 13647c6ae99SBarry Smith ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr); 13747c6ae99SBarry Smith ierr = DMView(lnk->dm,v);CHKERRQ(ierr); 13847c6ae99SBarry Smith ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr); 13947c6ae99SBarry Smith } else { 14006ebdd98SJed Brown ierr = PetscViewerASCIIPrintf(v,"Link %d: Redundant array of size %d owned by rank %d\n",i,lnk->nlocal,lnk->rank);CHKERRQ(ierr); 14147c6ae99SBarry Smith } 14247c6ae99SBarry Smith } 14347c6ae99SBarry Smith ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr); 14447c6ae99SBarry Smith } 14547c6ae99SBarry Smith PetscFunctionReturn(0); 14647c6ae99SBarry Smith } 14747c6ae99SBarry Smith 14847c6ae99SBarry Smith /* --------------------------------------------------------------------------------------*/ 14947c6ae99SBarry Smith #undef __FUNCT__ 150d7bf68aeSBarry Smith #define __FUNCT__ "DMSetUp_Composite" 1517087cfbeSBarry Smith PetscErrorCode DMSetUp_Composite(DM dm) 15247c6ae99SBarry Smith { 15347c6ae99SBarry Smith PetscErrorCode ierr; 15447c6ae99SBarry Smith PetscInt nprev = 0; 15547c6ae99SBarry Smith PetscMPIInt rank,size; 15647c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 15747c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 15847c6ae99SBarry Smith PetscLayout map; 15947c6ae99SBarry Smith 16047c6ae99SBarry Smith PetscFunctionBegin; 16147c6ae99SBarry Smith if (com->setup) SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_ARG_WRONGSTATE,"Packer has already been setup"); 16247c6ae99SBarry Smith ierr = PetscLayoutCreate(((PetscObject)dm)->comm,&map);CHKERRQ(ierr); 16347c6ae99SBarry Smith ierr = PetscLayoutSetLocalSize(map,com->n);CHKERRQ(ierr); 16447c6ae99SBarry Smith ierr = PetscLayoutSetSize(map,PETSC_DETERMINE);CHKERRQ(ierr); 16547c6ae99SBarry Smith ierr = PetscLayoutSetBlockSize(map,1);CHKERRQ(ierr); 16647c6ae99SBarry Smith ierr = PetscLayoutSetUp(map);CHKERRQ(ierr); 16747c6ae99SBarry Smith ierr = PetscLayoutGetSize(map,&com->N);CHKERRQ(ierr); 16847c6ae99SBarry Smith ierr = PetscLayoutGetRange(map,&com->rstart,PETSC_NULL);CHKERRQ(ierr); 16947c6ae99SBarry Smith ierr = PetscLayoutDestroy(map);CHKERRQ(ierr); 17047c6ae99SBarry Smith 17147c6ae99SBarry Smith /* now set the rstart for each linked array/vector */ 17247c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 17347c6ae99SBarry Smith ierr = MPI_Comm_size(((PetscObject)dm)->comm,&size);CHKERRQ(ierr); 17447c6ae99SBarry Smith while (next) { 17547c6ae99SBarry Smith next->rstart = nprev; 17606ebdd98SJed Brown nprev += next->n; 17747c6ae99SBarry Smith next->grstart = com->rstart + next->rstart; 17847c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 17947c6ae99SBarry Smith ierr = MPI_Bcast(&next->grstart,1,MPIU_INT,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 18047c6ae99SBarry Smith } else { 18147c6ae99SBarry Smith ierr = PetscMalloc(size*sizeof(PetscInt),&next->grstarts);CHKERRQ(ierr); 18247c6ae99SBarry Smith ierr = MPI_Allgather(&next->grstart,1,MPIU_INT,next->grstarts,1,MPIU_INT,((PetscObject)dm)->comm);CHKERRQ(ierr); 18347c6ae99SBarry Smith } 18447c6ae99SBarry Smith next = next->next; 18547c6ae99SBarry Smith } 18647c6ae99SBarry Smith com->setup = PETSC_TRUE; 18747c6ae99SBarry Smith PetscFunctionReturn(0); 18847c6ae99SBarry Smith } 18947c6ae99SBarry Smith 19047c6ae99SBarry Smith 19147c6ae99SBarry Smith #undef __FUNCT__ 19247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess_Array" 19347c6ae99SBarry Smith PetscErrorCode DMCompositeGetAccess_Array(DM dm,struct DMCompositeLink *mine,Vec vec,PetscScalar **array) 19447c6ae99SBarry Smith { 19547c6ae99SBarry Smith PetscErrorCode ierr; 19647c6ae99SBarry Smith PetscScalar *varray; 19747c6ae99SBarry Smith PetscMPIInt rank; 19847c6ae99SBarry Smith 19947c6ae99SBarry Smith PetscFunctionBegin; 20047c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 20147c6ae99SBarry Smith if (array) { 20247c6ae99SBarry Smith if (rank == mine->rank) { 20347c6ae99SBarry Smith ierr = VecGetArray(vec,&varray);CHKERRQ(ierr); 20447c6ae99SBarry Smith *array = varray + mine->rstart; 20547c6ae99SBarry Smith ierr = VecRestoreArray(vec,&varray);CHKERRQ(ierr); 20647c6ae99SBarry Smith } else { 20747c6ae99SBarry Smith *array = 0; 20847c6ae99SBarry Smith } 20947c6ae99SBarry Smith } 21047c6ae99SBarry Smith PetscFunctionReturn(0); 21147c6ae99SBarry Smith } 21247c6ae99SBarry Smith 21347c6ae99SBarry Smith #undef __FUNCT__ 21447c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess_DM" 21547c6ae99SBarry Smith PetscErrorCode DMCompositeGetAccess_DM(DM dm,struct DMCompositeLink *mine,Vec vec,Vec *global) 21647c6ae99SBarry Smith { 21747c6ae99SBarry Smith PetscErrorCode ierr; 21847c6ae99SBarry Smith PetscScalar *array; 21947c6ae99SBarry Smith 22047c6ae99SBarry Smith PetscFunctionBegin; 22147c6ae99SBarry Smith if (global) { 22247c6ae99SBarry Smith ierr = DMGetGlobalVector(mine->dm,global);CHKERRQ(ierr); 22347c6ae99SBarry Smith ierr = VecGetArray(vec,&array);CHKERRQ(ierr); 22447c6ae99SBarry Smith ierr = VecPlaceArray(*global,array+mine->rstart);CHKERRQ(ierr); 22547c6ae99SBarry Smith ierr = VecRestoreArray(vec,&array);CHKERRQ(ierr); 22647c6ae99SBarry Smith } 22747c6ae99SBarry Smith PetscFunctionReturn(0); 22847c6ae99SBarry Smith } 22947c6ae99SBarry Smith 23047c6ae99SBarry Smith #undef __FUNCT__ 23147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess_Array" 23247c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreAccess_Array(DM dm,struct DMCompositeLink *mine,Vec vec,PetscScalar **array) 23347c6ae99SBarry Smith { 23447c6ae99SBarry Smith PetscFunctionBegin; 23547c6ae99SBarry Smith PetscFunctionReturn(0); 23647c6ae99SBarry Smith } 23747c6ae99SBarry Smith 23847c6ae99SBarry Smith #undef __FUNCT__ 23947c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess_DM" 24047c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreAccess_DM(DM dm,struct DMCompositeLink *mine,Vec vec,Vec *global) 24147c6ae99SBarry Smith { 24247c6ae99SBarry Smith PetscErrorCode ierr; 24347c6ae99SBarry Smith 24447c6ae99SBarry Smith PetscFunctionBegin; 24547c6ae99SBarry Smith if (global) { 24647c6ae99SBarry Smith ierr = VecResetArray(*global);CHKERRQ(ierr); 24747c6ae99SBarry Smith ierr = DMRestoreGlobalVector(mine->dm,global);CHKERRQ(ierr); 24847c6ae99SBarry Smith } 24947c6ae99SBarry Smith PetscFunctionReturn(0); 25047c6ae99SBarry Smith } 25147c6ae99SBarry Smith 25247c6ae99SBarry Smith #undef __FUNCT__ 25347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter_Array" 25447c6ae99SBarry Smith PetscErrorCode DMCompositeScatter_Array(DM dm,struct DMCompositeLink *mine,Vec vec,PetscScalar *array) 25547c6ae99SBarry Smith { 25647c6ae99SBarry Smith PetscErrorCode ierr; 25747c6ae99SBarry Smith PetscScalar *varray; 25847c6ae99SBarry Smith PetscMPIInt rank; 25947c6ae99SBarry Smith 26047c6ae99SBarry Smith PetscFunctionBegin; 26147c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 26247c6ae99SBarry Smith if (rank == mine->rank) { 26347c6ae99SBarry Smith ierr = VecGetArray(vec,&varray);CHKERRQ(ierr); 26447c6ae99SBarry Smith ierr = PetscMemcpy(array,varray+mine->rstart,mine->n*sizeof(PetscScalar));CHKERRQ(ierr); 26547c6ae99SBarry Smith ierr = VecRestoreArray(vec,&varray);CHKERRQ(ierr); 26647c6ae99SBarry Smith } 26706ebdd98SJed Brown ierr = MPI_Bcast(array,mine->nlocal,MPIU_SCALAR,mine->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 26847c6ae99SBarry Smith PetscFunctionReturn(0); 26947c6ae99SBarry Smith } 27047c6ae99SBarry Smith 27147c6ae99SBarry Smith #undef __FUNCT__ 27247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter_DM" 27347c6ae99SBarry Smith PetscErrorCode DMCompositeScatter_DM(DM dm,struct DMCompositeLink *mine,Vec vec,Vec local) 27447c6ae99SBarry Smith { 27547c6ae99SBarry Smith PetscErrorCode ierr; 27647c6ae99SBarry Smith PetscScalar *array; 27747c6ae99SBarry Smith Vec global; 27847c6ae99SBarry Smith 27947c6ae99SBarry Smith PetscFunctionBegin; 28047c6ae99SBarry Smith ierr = DMGetGlobalVector(mine->dm,&global);CHKERRQ(ierr); 28147c6ae99SBarry Smith ierr = VecGetArray(vec,&array);CHKERRQ(ierr); 28247c6ae99SBarry Smith ierr = VecPlaceArray(global,array+mine->rstart);CHKERRQ(ierr); 28347c6ae99SBarry Smith ierr = DMGlobalToLocalBegin(mine->dm,global,INSERT_VALUES,local);CHKERRQ(ierr); 28447c6ae99SBarry Smith ierr = DMGlobalToLocalEnd(mine->dm,global,INSERT_VALUES,local);CHKERRQ(ierr); 28547c6ae99SBarry Smith ierr = VecRestoreArray(vec,&array);CHKERRQ(ierr); 28647c6ae99SBarry Smith ierr = VecResetArray(global);CHKERRQ(ierr); 28747c6ae99SBarry Smith ierr = DMRestoreGlobalVector(mine->dm,&global);CHKERRQ(ierr); 28847c6ae99SBarry Smith PetscFunctionReturn(0); 28947c6ae99SBarry Smith } 29047c6ae99SBarry Smith 29147c6ae99SBarry Smith #undef __FUNCT__ 29247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather_Array" 293acc1e270SJed Brown PetscErrorCode DMCompositeGather_Array(DM dm,struct DMCompositeLink *mine,Vec vec,InsertMode imode,const PetscScalar *array) 29447c6ae99SBarry Smith { 29547c6ae99SBarry Smith PetscErrorCode ierr; 29647c6ae99SBarry Smith PetscScalar *varray; 29747c6ae99SBarry Smith PetscMPIInt rank; 29847c6ae99SBarry Smith 29947c6ae99SBarry Smith PetscFunctionBegin; 30047c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 30147c6ae99SBarry Smith if (rank == mine->rank) { 30247c6ae99SBarry Smith ierr = VecGetArray(vec,&varray);CHKERRQ(ierr); 30347c6ae99SBarry Smith if (varray+mine->rstart == array) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"You need not DMCompositeGather() into objects obtained via DMCompositeGetAccess()"); 304acc1e270SJed Brown } 305df0c820aSJed Brown switch (imode) { 306df0c820aSJed Brown case INSERT_VALUES: 307acc1e270SJed Brown if (rank == mine->rank) { 30847c6ae99SBarry Smith ierr = PetscMemcpy(varray+mine->rstart,array,mine->n*sizeof(PetscScalar));CHKERRQ(ierr); 309acc1e270SJed Brown } 310df0c820aSJed Brown break; 311df0c820aSJed Brown case ADD_VALUES: { 312df0c820aSJed Brown PetscInt i; 313760fd489SMatthew G Knepley void *source; 314acc1e270SJed Brown PetscScalar *buffer,*dest; 315acc1e270SJed Brown if (rank == mine->rank) { 316acc1e270SJed Brown dest = &varray[mine->rstart]; 317acc1e270SJed Brown #if defined(PETSC_HAVE_MPI_IN_PLACE) 318acc1e270SJed Brown buffer = dest; 319acc1e270SJed Brown source = MPI_IN_PLACE; 320acc1e270SJed Brown #else 32106ebdd98SJed Brown ierr = PetscMalloc(mine->nlocal*sizeof(PetscScalar),&buffer);CHKERRQ(ierr); 322760fd489SMatthew G Knepley source = (void *) buffer; 323acc1e270SJed Brown #endif 32406ebdd98SJed Brown for (i=0; i<mine->nlocal; i++) buffer[i] = varray[mine->rstart+i] + array[i]; 325acc1e270SJed Brown } else { 326760fd489SMatthew G Knepley source = (void *) array; 327acc1e270SJed Brown dest = PETSC_NULL; 328acc1e270SJed Brown } 32906ebdd98SJed Brown ierr = MPI_Reduce(source,dest,mine->nlocal,MPIU_SCALAR,MPI_SUM,mine->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 330acc1e270SJed Brown #if !defined(PETSC_HAVE_MPI_IN_PLACE) 331acc1e270SJed Brown if (rank == mine->rank) {ierr = PetscFree(source);CHKERRQ(ierr);} 332acc1e270SJed Brown #endif 333df0c820aSJed Brown } break; 334df0c820aSJed Brown default: SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"imode"); 335df0c820aSJed Brown } 336acc1e270SJed Brown if (rank == mine->rank) {ierr = VecRestoreArray(vec,&varray);CHKERRQ(ierr);} 33747c6ae99SBarry Smith PetscFunctionReturn(0); 33847c6ae99SBarry Smith } 33947c6ae99SBarry Smith 34047c6ae99SBarry Smith #undef __FUNCT__ 34147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather_DM" 342df0c820aSJed Brown PetscErrorCode DMCompositeGather_DM(DM dm,struct DMCompositeLink *mine,Vec vec,InsertMode imode,Vec local) 34347c6ae99SBarry Smith { 34447c6ae99SBarry Smith PetscErrorCode ierr; 34547c6ae99SBarry Smith PetscScalar *array; 34647c6ae99SBarry Smith Vec global; 34747c6ae99SBarry Smith 34847c6ae99SBarry Smith PetscFunctionBegin; 34947c6ae99SBarry Smith ierr = DMGetGlobalVector(mine->dm,&global);CHKERRQ(ierr); 35047c6ae99SBarry Smith ierr = VecGetArray(vec,&array);CHKERRQ(ierr); 35147c6ae99SBarry Smith ierr = VecPlaceArray(global,array+mine->rstart);CHKERRQ(ierr); 352df0c820aSJed Brown ierr = DMLocalToGlobalBegin(mine->dm,local,imode,global);CHKERRQ(ierr); 353df0c820aSJed Brown ierr = DMLocalToGlobalEnd(mine->dm,local,imode,global);CHKERRQ(ierr); 35447c6ae99SBarry Smith ierr = VecRestoreArray(vec,&array);CHKERRQ(ierr); 35547c6ae99SBarry Smith ierr = VecResetArray(global);CHKERRQ(ierr); 35647c6ae99SBarry Smith ierr = DMRestoreGlobalVector(mine->dm,&global);CHKERRQ(ierr); 35747c6ae99SBarry Smith PetscFunctionReturn(0); 35847c6ae99SBarry Smith } 35947c6ae99SBarry Smith 36047c6ae99SBarry Smith /* ----------------------------------------------------------------------------------*/ 36147c6ae99SBarry Smith 36247c6ae99SBarry Smith #include <stdarg.h> 36347c6ae99SBarry Smith 36447c6ae99SBarry Smith #undef __FUNCT__ 36547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetNumberDM" 36647c6ae99SBarry Smith /*@C 36747c6ae99SBarry Smith DMCompositeGetNumberDM - Get's the number of DM objects in the DMComposite 36847c6ae99SBarry Smith representation. 36947c6ae99SBarry Smith 37047c6ae99SBarry Smith Not Collective 37147c6ae99SBarry Smith 37247c6ae99SBarry Smith Input Parameter: 37347c6ae99SBarry Smith . dm - the packer object 37447c6ae99SBarry Smith 37547c6ae99SBarry Smith Output Parameter: 37647c6ae99SBarry Smith . nDM - the number of DMs 37747c6ae99SBarry Smith 37847c6ae99SBarry Smith Level: beginner 37947c6ae99SBarry Smith 38047c6ae99SBarry Smith @*/ 3817087cfbeSBarry Smith PetscErrorCode DMCompositeGetNumberDM(DM dm,PetscInt *nDM) 38247c6ae99SBarry Smith { 38347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 38447c6ae99SBarry Smith PetscFunctionBegin; 38547c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 38647c6ae99SBarry Smith *nDM = com->nDM; 38747c6ae99SBarry Smith PetscFunctionReturn(0); 38847c6ae99SBarry Smith } 38947c6ae99SBarry Smith 39047c6ae99SBarry Smith 39147c6ae99SBarry Smith #undef __FUNCT__ 39247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess" 39347c6ae99SBarry Smith /*@C 39447c6ae99SBarry Smith DMCompositeGetAccess - Allows one to access the individual packed vectors in their global 39547c6ae99SBarry Smith representation. 39647c6ae99SBarry Smith 39747c6ae99SBarry Smith Collective on DMComposite 39847c6ae99SBarry Smith 39947c6ae99SBarry Smith Input Parameter: 40047c6ae99SBarry Smith + dm - the packer object 40147c6ae99SBarry Smith . gvec - the global vector 40247c6ae99SBarry Smith - ... - the individual sequential or parallel objects (arrays or vectors) 40347c6ae99SBarry Smith 40447c6ae99SBarry Smith Notes: Use DMCompositeRestoreAccess() to return the vectors when you no longer need them 40547c6ae99SBarry Smith 40647c6ae99SBarry Smith Level: advanced 40747c6ae99SBarry Smith 40847c6ae99SBarry Smith @*/ 4097087cfbeSBarry Smith PetscErrorCode DMCompositeGetAccess(DM dm,Vec gvec,...) 41047c6ae99SBarry Smith { 41147c6ae99SBarry Smith va_list Argp; 41247c6ae99SBarry Smith PetscErrorCode ierr; 41347c6ae99SBarry Smith struct DMCompositeLink *next; 41447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 41547c6ae99SBarry Smith 41647c6ae99SBarry Smith PetscFunctionBegin; 41747c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 41847c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 41947c6ae99SBarry Smith next = com->next; 42047c6ae99SBarry Smith if (!com->setup) { 421d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 42247c6ae99SBarry Smith } 42347c6ae99SBarry Smith 42447c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 42547c6ae99SBarry Smith va_start(Argp,gvec); 42647c6ae99SBarry Smith while (next) { 42747c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 42847c6ae99SBarry Smith PetscScalar **array; 42947c6ae99SBarry Smith array = va_arg(Argp, PetscScalar**); 43047c6ae99SBarry Smith ierr = DMCompositeGetAccess_Array(dm,next,gvec,array);CHKERRQ(ierr); 43147c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 43247c6ae99SBarry Smith Vec *vec; 43347c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 43447c6ae99SBarry Smith ierr = DMCompositeGetAccess_DM(dm,next,gvec,vec);CHKERRQ(ierr); 43547c6ae99SBarry Smith } else { 43647c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 43747c6ae99SBarry Smith } 43847c6ae99SBarry Smith next = next->next; 43947c6ae99SBarry Smith } 44047c6ae99SBarry Smith va_end(Argp); 44147c6ae99SBarry Smith PetscFunctionReturn(0); 44247c6ae99SBarry Smith } 44347c6ae99SBarry Smith 44447c6ae99SBarry Smith #undef __FUNCT__ 44547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess" 44647c6ae99SBarry Smith /*@C 447aa219208SBarry Smith DMCompositeRestoreAccess - Returns the vectors obtained with DMCompositeGetAccess() 44847c6ae99SBarry Smith representation. 44947c6ae99SBarry Smith 45047c6ae99SBarry Smith Collective on DMComposite 45147c6ae99SBarry Smith 45247c6ae99SBarry Smith Input Parameter: 45347c6ae99SBarry Smith + dm - the packer object 45447c6ae99SBarry Smith . gvec - the global vector 45547c6ae99SBarry Smith - ... - the individual sequential or parallel objects (arrays or vectors) 45647c6ae99SBarry Smith 45747c6ae99SBarry Smith Level: advanced 45847c6ae99SBarry Smith 4590c010503SBarry Smith .seealso DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 4606eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeScatter(), 461aa219208SBarry Smith DMCompositeRestoreAccess(), DMCompositeGetAccess() 46247c6ae99SBarry Smith 46347c6ae99SBarry Smith @*/ 4647087cfbeSBarry Smith PetscErrorCode DMCompositeRestoreAccess(DM dm,Vec gvec,...) 46547c6ae99SBarry Smith { 46647c6ae99SBarry Smith va_list Argp; 46747c6ae99SBarry Smith PetscErrorCode ierr; 46847c6ae99SBarry Smith struct DMCompositeLink *next; 46947c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 47047c6ae99SBarry Smith 47147c6ae99SBarry Smith PetscFunctionBegin; 47247c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 47347c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 47447c6ae99SBarry Smith next = com->next; 47547c6ae99SBarry Smith if (!com->setup) { 476d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 47747c6ae99SBarry Smith } 47847c6ae99SBarry Smith 47947c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 48047c6ae99SBarry Smith va_start(Argp,gvec); 48147c6ae99SBarry Smith while (next) { 48247c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 48347c6ae99SBarry Smith PetscScalar **array; 48447c6ae99SBarry Smith array = va_arg(Argp, PetscScalar**); 48547c6ae99SBarry Smith ierr = DMCompositeRestoreAccess_Array(dm,next,gvec,array);CHKERRQ(ierr); 48647c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 48747c6ae99SBarry Smith Vec *vec; 48847c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 48947c6ae99SBarry Smith ierr = DMCompositeRestoreAccess_DM(dm,next,gvec,vec);CHKERRQ(ierr); 49047c6ae99SBarry Smith } else { 49147c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 49247c6ae99SBarry Smith } 49347c6ae99SBarry Smith next = next->next; 49447c6ae99SBarry Smith } 49547c6ae99SBarry Smith va_end(Argp); 49647c6ae99SBarry Smith PetscFunctionReturn(0); 49747c6ae99SBarry Smith } 49847c6ae99SBarry Smith 49947c6ae99SBarry Smith #undef __FUNCT__ 50047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter" 50147c6ae99SBarry Smith /*@C 50247c6ae99SBarry Smith DMCompositeScatter - Scatters from a global packed vector into its individual local vectors 50347c6ae99SBarry Smith 50447c6ae99SBarry Smith Collective on DMComposite 50547c6ae99SBarry Smith 50647c6ae99SBarry Smith Input Parameter: 50747c6ae99SBarry Smith + dm - the packer object 50847c6ae99SBarry Smith . gvec - the global vector 5098fd8f222SJed Brown - ... - the individual sequential objects (arrays or vectors), PETSC_NULL for those that are not needed 51047c6ae99SBarry Smith 51147c6ae99SBarry Smith Level: advanced 51247c6ae99SBarry Smith 5130c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 5146eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 51547c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 51647c6ae99SBarry Smith 51747c6ae99SBarry Smith @*/ 5187087cfbeSBarry Smith PetscErrorCode DMCompositeScatter(DM dm,Vec gvec,...) 51947c6ae99SBarry Smith { 52047c6ae99SBarry Smith va_list Argp; 52147c6ae99SBarry Smith PetscErrorCode ierr; 52247c6ae99SBarry Smith struct DMCompositeLink *next; 5238fd8f222SJed Brown PetscInt cnt; 52447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 52547c6ae99SBarry Smith 52647c6ae99SBarry Smith PetscFunctionBegin; 52747c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 52847c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 52947c6ae99SBarry Smith if (!com->setup) { 530d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 53147c6ae99SBarry Smith } 53247c6ae99SBarry Smith 53347c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 53447c6ae99SBarry Smith va_start(Argp,gvec); 5358fd8f222SJed Brown for (cnt=3,next=com->next; next; cnt++,next=next->next) { 53647c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 53747c6ae99SBarry Smith PetscScalar *array; 53847c6ae99SBarry Smith array = va_arg(Argp, PetscScalar*); 539c72eef85SJed Brown if (array) PetscValidScalarPointer(array,cnt); 540c72eef85SJed Brown PetscValidLogicalCollectiveBool(dm,!!array,cnt); 5418fd8f222SJed Brown if (!array) continue; 54247c6ae99SBarry Smith ierr = DMCompositeScatter_Array(dm,next,gvec,array);CHKERRQ(ierr); 54347c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 54447c6ae99SBarry Smith Vec vec; 54547c6ae99SBarry Smith vec = va_arg(Argp, Vec); 5468fd8f222SJed Brown if (!vec) continue; 54747c6ae99SBarry Smith PetscValidHeaderSpecific(vec,VEC_CLASSID,cnt); 54847c6ae99SBarry Smith ierr = DMCompositeScatter_DM(dm,next,gvec,vec);CHKERRQ(ierr); 54947c6ae99SBarry Smith } else { 55047c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 55147c6ae99SBarry Smith } 55247c6ae99SBarry Smith } 55347c6ae99SBarry Smith va_end(Argp); 55447c6ae99SBarry Smith PetscFunctionReturn(0); 55547c6ae99SBarry Smith } 55647c6ae99SBarry Smith 55747c6ae99SBarry Smith #undef __FUNCT__ 55847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather" 55947c6ae99SBarry Smith /*@C 56047c6ae99SBarry Smith DMCompositeGather - Gathers into a global packed vector from its individual local vectors 56147c6ae99SBarry Smith 56247c6ae99SBarry Smith Collective on DMComposite 56347c6ae99SBarry Smith 56447c6ae99SBarry Smith Input Parameter: 56547c6ae99SBarry Smith + dm - the packer object 56647c6ae99SBarry Smith . gvec - the global vector 5678fd8f222SJed Brown - ... - the individual sequential objects (arrays or vectors), PETSC_NULL for any that are not needed 56847c6ae99SBarry Smith 56947c6ae99SBarry Smith Level: advanced 57047c6ae99SBarry Smith 5710c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 5726eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 57347c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 57447c6ae99SBarry Smith 57547c6ae99SBarry Smith @*/ 5767087cfbeSBarry Smith PetscErrorCode DMCompositeGather(DM dm,Vec gvec,InsertMode imode,...) 57747c6ae99SBarry Smith { 57847c6ae99SBarry Smith va_list Argp; 57947c6ae99SBarry Smith PetscErrorCode ierr; 58047c6ae99SBarry Smith struct DMCompositeLink *next; 58147c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 5828fd8f222SJed Brown PetscInt cnt; 58347c6ae99SBarry Smith 58447c6ae99SBarry Smith PetscFunctionBegin; 58547c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 58647c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 58747c6ae99SBarry Smith if (!com->setup) { 588d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 58947c6ae99SBarry Smith } 59047c6ae99SBarry Smith 59147c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 592df0c820aSJed Brown va_start(Argp,imode); 5938fd8f222SJed Brown for (cnt=3,next=com->next; next; cnt++,next=next->next) { 59447c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 59547c6ae99SBarry Smith PetscScalar *array; 59647c6ae99SBarry Smith array = va_arg(Argp, PetscScalar*); 5978fd8f222SJed Brown if (!array) continue; 5988fd8f222SJed Brown PetscValidScalarPointer(array,cnt); 599df0c820aSJed Brown ierr = DMCompositeGather_Array(dm,next,gvec,imode,array);CHKERRQ(ierr); 60047c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 60147c6ae99SBarry Smith Vec vec; 60247c6ae99SBarry Smith vec = va_arg(Argp, Vec); 6038fd8f222SJed Brown if (!vec) continue; 6048fd8f222SJed Brown PetscValidHeaderSpecific(vec,VEC_CLASSID,cnt); 605df0c820aSJed Brown ierr = DMCompositeGather_DM(dm,next,gvec,imode,vec);CHKERRQ(ierr); 60647c6ae99SBarry Smith } else { 60747c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 60847c6ae99SBarry Smith } 60947c6ae99SBarry Smith } 61047c6ae99SBarry Smith va_end(Argp); 61147c6ae99SBarry Smith PetscFunctionReturn(0); 61247c6ae99SBarry Smith } 61347c6ae99SBarry Smith 61447c6ae99SBarry Smith #undef __FUNCT__ 61547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeAddArray" 61647c6ae99SBarry Smith /*@C 61747c6ae99SBarry Smith DMCompositeAddArray - adds an "redundant" array to a DMComposite. The array values will 61847c6ae99SBarry Smith be stored in part of the array on process orank. 61947c6ae99SBarry Smith 62047c6ae99SBarry Smith Collective on DMComposite 62147c6ae99SBarry Smith 62247c6ae99SBarry Smith Input Parameter: 62347c6ae99SBarry Smith + dm - the packer object 62447c6ae99SBarry Smith . orank - the process on which the array entries officially live, this number must be 62547c6ae99SBarry Smith the same on all processes. 62647c6ae99SBarry Smith - n - the length of the array 62747c6ae99SBarry Smith 62847c6ae99SBarry Smith Level: advanced 62947c6ae99SBarry Smith 6300c010503SBarry Smith .seealso DMDestroy(), DMCompositeGather(), DMCompositeAddDM(), DMCreateGlobalVector(), 6316eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 63247c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 63347c6ae99SBarry Smith 63447c6ae99SBarry Smith @*/ 6357087cfbeSBarry Smith PetscErrorCode DMCompositeAddArray(DM dm,PetscMPIInt orank,PetscInt n) 63647c6ae99SBarry Smith { 63747c6ae99SBarry Smith struct DMCompositeLink *mine,*next; 63847c6ae99SBarry Smith PetscErrorCode ierr; 63947c6ae99SBarry Smith PetscMPIInt rank; 64047c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 64147c6ae99SBarry Smith 64247c6ae99SBarry Smith PetscFunctionBegin; 64347c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 64447c6ae99SBarry Smith next = com->next; 64547c6ae99SBarry Smith if (com->setup) { 64647c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_ARG_WRONGSTATE,"Cannot add an array once you have used the DMComposite"); 64747c6ae99SBarry Smith } 64847c6ae99SBarry Smith #if defined(PETSC_USE_DEBUG) 64947c6ae99SBarry Smith { 65047c6ae99SBarry Smith PetscMPIInt orankmax; 65147c6ae99SBarry Smith ierr = MPI_Allreduce(&orank,&orankmax,1,MPI_INT,MPI_MAX,((PetscObject)dm)->comm);CHKERRQ(ierr); 65247c6ae99SBarry Smith if (orank != orankmax) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"orank %d must be equal on all processes, another process has value %d",orank,orankmax); 65347c6ae99SBarry Smith } 65447c6ae99SBarry Smith #endif 65547c6ae99SBarry Smith 65647c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 65747c6ae99SBarry Smith /* create new link */ 65847c6ae99SBarry Smith ierr = PetscNew(struct DMCompositeLink,&mine);CHKERRQ(ierr); 65906ebdd98SJed Brown mine->nlocal = n; 66006ebdd98SJed Brown mine->n = (rank == orank) ? n : 0; 66147c6ae99SBarry Smith mine->rank = orank; 66247c6ae99SBarry Smith mine->dm = PETSC_NULL; 66347c6ae99SBarry Smith mine->type = DMCOMPOSITE_ARRAY; 66447c6ae99SBarry Smith mine->next = PETSC_NULL; 66547c6ae99SBarry Smith if (rank == mine->rank) {com->n += n;com->nmine++;} 66647c6ae99SBarry Smith 66747c6ae99SBarry Smith /* add to end of list */ 66847c6ae99SBarry Smith if (!next) { 66947c6ae99SBarry Smith com->next = mine; 67047c6ae99SBarry Smith } else { 67147c6ae99SBarry Smith while (next->next) next = next->next; 67247c6ae99SBarry Smith next->next = mine; 67347c6ae99SBarry Smith } 67447c6ae99SBarry Smith com->nredundant++; 67547c6ae99SBarry Smith PetscFunctionReturn(0); 67647c6ae99SBarry Smith } 67747c6ae99SBarry Smith 67847c6ae99SBarry Smith #undef __FUNCT__ 67947c6ae99SBarry Smith #define __FUNCT__ "DMCompositeAddDM" 68047c6ae99SBarry Smith /*@C 681aa219208SBarry Smith DMCompositeAddDM - adds a DM vector to a DMComposite 68247c6ae99SBarry Smith 68347c6ae99SBarry Smith Collective on DMComposite 68447c6ae99SBarry Smith 68547c6ae99SBarry Smith Input Parameter: 68647c6ae99SBarry Smith + dm - the packer object 68747c6ae99SBarry Smith - dm - the DM object, if the DM is a da you will need to caste it with a (DM) 68847c6ae99SBarry Smith 68947c6ae99SBarry Smith Level: advanced 69047c6ae99SBarry Smith 6910c010503SBarry Smith .seealso DMDestroy(), DMCompositeGather(), DMCompositeAddDM(), DMCreateGlobalVector(), 6926eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 69347c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 69447c6ae99SBarry Smith 69547c6ae99SBarry Smith @*/ 6967087cfbeSBarry Smith PetscErrorCode DMCompositeAddDM(DM dmc,DM dm) 69747c6ae99SBarry Smith { 69847c6ae99SBarry Smith PetscErrorCode ierr; 69906ebdd98SJed Brown PetscInt n,nlocal; 70047c6ae99SBarry Smith struct DMCompositeLink *mine,*next; 70106ebdd98SJed Brown Vec global,local; 70247c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dmc->data; 70347c6ae99SBarry Smith 70447c6ae99SBarry Smith PetscFunctionBegin; 70547c6ae99SBarry Smith PetscValidHeaderSpecific(dmc,DM_CLASSID,1); 70647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,2); 70747c6ae99SBarry Smith next = com->next; 708aa219208SBarry Smith if (com->setup) SETERRQ(((PetscObject)dmc)->comm,PETSC_ERR_ARG_WRONGSTATE,"Cannot add a DM once you have used the DMComposite"); 70947c6ae99SBarry Smith 71047c6ae99SBarry Smith /* create new link */ 71147c6ae99SBarry Smith ierr = PetscNew(struct DMCompositeLink,&mine);CHKERRQ(ierr); 71247c6ae99SBarry Smith ierr = PetscObjectReference((PetscObject)dm);CHKERRQ(ierr); 71347c6ae99SBarry Smith ierr = DMGetGlobalVector(dm,&global);CHKERRQ(ierr); 71447c6ae99SBarry Smith ierr = VecGetLocalSize(global,&n);CHKERRQ(ierr); 71547c6ae99SBarry Smith ierr = DMRestoreGlobalVector(dm,&global);CHKERRQ(ierr); 71606ebdd98SJed Brown ierr = DMGetLocalVector(dm,&local);CHKERRQ(ierr); 71706ebdd98SJed Brown ierr = VecGetSize(local,&nlocal);CHKERRQ(ierr); 71806ebdd98SJed Brown ierr = DMRestoreLocalVector(dm,&local);CHKERRQ(ierr); 71947c6ae99SBarry Smith mine->n = n; 72006ebdd98SJed Brown mine->nlocal = nlocal; 72147c6ae99SBarry Smith mine->dm = dm; 72247c6ae99SBarry Smith mine->type = DMCOMPOSITE_DM; 72347c6ae99SBarry Smith mine->next = PETSC_NULL; 72447c6ae99SBarry Smith com->n += n; 72547c6ae99SBarry Smith 72647c6ae99SBarry Smith /* add to end of list */ 72747c6ae99SBarry Smith if (!next) { 72847c6ae99SBarry Smith com->next = mine; 72947c6ae99SBarry Smith } else { 73047c6ae99SBarry Smith while (next->next) next = next->next; 73147c6ae99SBarry Smith next->next = mine; 73247c6ae99SBarry Smith } 73347c6ae99SBarry Smith com->nDM++; 73447c6ae99SBarry Smith com->nmine++; 73547c6ae99SBarry Smith PetscFunctionReturn(0); 73647c6ae99SBarry Smith } 73747c6ae99SBarry Smith 7387087cfbeSBarry Smith extern PetscErrorCode VecView_MPI(Vec,PetscViewer); 73947c6ae99SBarry Smith EXTERN_C_BEGIN 74047c6ae99SBarry Smith #undef __FUNCT__ 74147c6ae99SBarry Smith #define __FUNCT__ "VecView_DMComposite" 7427087cfbeSBarry Smith PetscErrorCode VecView_DMComposite(Vec gvec,PetscViewer viewer) 74347c6ae99SBarry Smith { 74447c6ae99SBarry Smith DM dm; 74547c6ae99SBarry Smith PetscErrorCode ierr; 74647c6ae99SBarry Smith struct DMCompositeLink *next; 74747c6ae99SBarry Smith PetscBool isdraw; 748cef07954SSatish Balay DM_Composite *com; 74947c6ae99SBarry Smith 75047c6ae99SBarry Smith PetscFunctionBegin; 75147c6ae99SBarry Smith ierr = PetscObjectQuery((PetscObject)gvec,"DMComposite",(PetscObject*)&dm);CHKERRQ(ierr); 75247c6ae99SBarry Smith if (!dm) SETERRQ(((PetscObject)gvec)->comm,PETSC_ERR_ARG_WRONG,"Vector not generated from a DMComposite"); 75347c6ae99SBarry Smith com = (DM_Composite*)dm->data; 75447c6ae99SBarry Smith next = com->next; 75547c6ae99SBarry Smith 75647c6ae99SBarry Smith ierr = PetscTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr); 75747c6ae99SBarry Smith if (!isdraw) { 75847c6ae99SBarry Smith /* do I really want to call this? */ 75947c6ae99SBarry Smith ierr = VecView_MPI(gvec,viewer);CHKERRQ(ierr); 76047c6ae99SBarry Smith } else { 76147c6ae99SBarry Smith PetscInt cnt = 0; 76247c6ae99SBarry Smith 76347c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 76447c6ae99SBarry Smith while (next) { 76547c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 76647c6ae99SBarry Smith PetscScalar *array; 76747c6ae99SBarry Smith ierr = DMCompositeGetAccess_Array(dm,next,gvec,&array);CHKERRQ(ierr); 76847c6ae99SBarry Smith 76947c6ae99SBarry Smith /*skip it for now */ 77047c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 77147c6ae99SBarry Smith Vec vec; 77247c6ae99SBarry Smith PetscInt bs; 77347c6ae99SBarry Smith 77447c6ae99SBarry Smith ierr = DMCompositeGetAccess_DM(dm,next,gvec,&vec);CHKERRQ(ierr); 77547c6ae99SBarry Smith ierr = VecView(vec,viewer);CHKERRQ(ierr); 77647c6ae99SBarry Smith ierr = VecGetBlockSize(vec,&bs);CHKERRQ(ierr); 77747c6ae99SBarry Smith ierr = DMCompositeRestoreAccess_DM(dm,next,gvec,&vec);CHKERRQ(ierr); 77847c6ae99SBarry Smith ierr = PetscViewerDrawBaseAdd(viewer,bs);CHKERRQ(ierr); 77947c6ae99SBarry Smith cnt += bs; 78047c6ae99SBarry Smith } else { 78147c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 78247c6ae99SBarry Smith } 78347c6ae99SBarry Smith next = next->next; 78447c6ae99SBarry Smith } 78547c6ae99SBarry Smith ierr = PetscViewerDrawBaseAdd(viewer,-cnt);CHKERRQ(ierr); 78647c6ae99SBarry Smith } 78747c6ae99SBarry Smith PetscFunctionReturn(0); 78847c6ae99SBarry Smith } 78947c6ae99SBarry Smith EXTERN_C_END 79047c6ae99SBarry Smith 79147c6ae99SBarry Smith 79247c6ae99SBarry Smith #undef __FUNCT__ 7930c010503SBarry Smith #define __FUNCT__ "DMCreateGlobalVector_Composite" 7947087cfbeSBarry Smith PetscErrorCode DMCreateGlobalVector_Composite(DM dm,Vec *gvec) 79547c6ae99SBarry Smith { 79647c6ae99SBarry Smith PetscErrorCode ierr; 79747c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 79847c6ae99SBarry Smith 79947c6ae99SBarry Smith PetscFunctionBegin; 80047c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 80147c6ae99SBarry Smith if (!com->setup) { 802d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 80347c6ae99SBarry Smith } 80447c6ae99SBarry Smith ierr = VecCreateMPI(((PetscObject)dm)->comm,com->n,com->N,gvec);CHKERRQ(ierr); 80547c6ae99SBarry Smith ierr = PetscObjectCompose((PetscObject)*gvec,"DMComposite",(PetscObject)dm);CHKERRQ(ierr); 80647c6ae99SBarry Smith ierr = VecSetOperation(*gvec,VECOP_VIEW,(void(*)(void))VecView_DMComposite);CHKERRQ(ierr); 80747c6ae99SBarry Smith PetscFunctionReturn(0); 80847c6ae99SBarry Smith } 80947c6ae99SBarry Smith 81047c6ae99SBarry Smith #undef __FUNCT__ 8110c010503SBarry Smith #define __FUNCT__ "DMCreateLocalVector_Composite" 8127087cfbeSBarry Smith PetscErrorCode DMCreateLocalVector_Composite(DM dm,Vec *lvec) 81347c6ae99SBarry Smith { 81447c6ae99SBarry Smith PetscErrorCode ierr; 81547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 81647c6ae99SBarry Smith 81747c6ae99SBarry Smith PetscFunctionBegin; 81847c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 81947c6ae99SBarry Smith if (!com->setup) { 820d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 82147c6ae99SBarry Smith } 82247c6ae99SBarry Smith ierr = VecCreateSeq(((PetscObject)dm)->comm,com->nghost,lvec);CHKERRQ(ierr); 82347c6ae99SBarry Smith ierr = PetscObjectCompose((PetscObject)*lvec,"DMComposite",(PetscObject)dm);CHKERRQ(ierr); 82447c6ae99SBarry Smith PetscFunctionReturn(0); 82547c6ae99SBarry Smith } 82647c6ae99SBarry Smith 82747c6ae99SBarry Smith #undef __FUNCT__ 8286eb61c8cSJed Brown #define __FUNCT__ "DMCompositeGetISLocalToGlobalMappings" 82947c6ae99SBarry Smith /*@C 8306eb61c8cSJed Brown DMCompositeGetISLocalToGlobalMappings - gets an ISLocalToGlobalMapping for each DM/array in the DMComposite, maps to the composite global space 83147c6ae99SBarry Smith 83206ebdd98SJed Brown Collective on DM 83347c6ae99SBarry Smith 83447c6ae99SBarry Smith Input Parameter: 83547c6ae99SBarry Smith . dm - the packer object 83647c6ae99SBarry Smith 83747c6ae99SBarry Smith Output Parameters: 8386eb61c8cSJed Brown . ltogs - the individual mappings for each packed vector/array. Note that this includes 839aa219208SBarry Smith all the ghost points that individual ghosted DMDA's may have. Also each process has an 8406eb61c8cSJed Brown mapping for EACH redundant array (not just the local redundant arrays). 84147c6ae99SBarry Smith 84247c6ae99SBarry Smith Level: advanced 84347c6ae99SBarry Smith 84447c6ae99SBarry Smith Notes: 8456eb61c8cSJed Brown Each entry of ltogs should be destroyed with ISLocalToGlobalMappingDestroy(), the ltogs array should be freed with PetscFree(). 84647c6ae99SBarry Smith 8470c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 84847c6ae99SBarry Smith DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(), 84947c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries() 85047c6ae99SBarry Smith 85147c6ae99SBarry Smith @*/ 8527087cfbeSBarry Smith PetscErrorCode DMCompositeGetISLocalToGlobalMappings(DM dm,ISLocalToGlobalMapping **ltogs) 85347c6ae99SBarry Smith { 85447c6ae99SBarry Smith PetscErrorCode ierr; 85547c6ae99SBarry Smith PetscInt i,*idx,n,cnt; 85647c6ae99SBarry Smith struct DMCompositeLink *next; 85747c6ae99SBarry Smith PetscMPIInt rank; 85847c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 85947c6ae99SBarry Smith 86047c6ae99SBarry Smith PetscFunctionBegin; 86147c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 862acc1e270SJed Brown ierr = PetscMalloc((com->nDM+com->nredundant)*sizeof(ISLocalToGlobalMapping),ltogs);CHKERRQ(ierr); 86347c6ae99SBarry Smith next = com->next; 86447c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 86547c6ae99SBarry Smith 86647c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 86747c6ae99SBarry Smith cnt = 0; 86847c6ae99SBarry Smith while (next) { 86947c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 87006ebdd98SJed Brown ierr = PetscMalloc(next->nlocal*sizeof(PetscInt),&idx);CHKERRQ(ierr); 87147c6ae99SBarry Smith if (rank == next->rank) { 87206ebdd98SJed Brown for (i=0; i<next->nlocal; i++) idx[i] = next->grstart + i; 87347c6ae99SBarry Smith } 87406ebdd98SJed Brown ierr = MPI_Bcast(idx,next->nlocal,MPIU_INT,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 87506ebdd98SJed Brown ierr = ISLocalToGlobalMappingCreate(((PetscObject)dm)->comm,next->nlocal,idx,PETSC_OWN_POINTER,&(*ltogs)[cnt]);CHKERRQ(ierr); 87647c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 8776eb61c8cSJed Brown ISLocalToGlobalMapping ltog; 8786eb61c8cSJed Brown PetscMPIInt size; 87986994e45SJed Brown const PetscInt *suboff,*indices; 8806eb61c8cSJed Brown Vec global; 88147c6ae99SBarry Smith 8826eb61c8cSJed Brown /* Get sub-DM global indices for each local dof */ 8831411c6eeSJed Brown ierr = DMGetLocalToGlobalMapping(next->dm,<og);CHKERRQ(ierr); 8846eb61c8cSJed Brown ierr = ISLocalToGlobalMappingGetSize(ltog,&n);CHKERRQ(ierr); 88586994e45SJed Brown ierr = ISLocalToGlobalMappingGetIndices(ltog,&indices);CHKERRQ(ierr); 88647c6ae99SBarry Smith ierr = PetscMalloc(n*sizeof(PetscInt),&idx);CHKERRQ(ierr); 88747c6ae99SBarry Smith 8886eb61c8cSJed Brown /* Get the offsets for the sub-DM global vector */ 8896eb61c8cSJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 8906eb61c8cSJed Brown ierr = VecGetOwnershipRanges(global,&suboff);CHKERRQ(ierr); 8916eb61c8cSJed Brown ierr = MPI_Comm_size(((PetscObject)global)->comm,&size);CHKERRQ(ierr); 8926eb61c8cSJed Brown 8936eb61c8cSJed Brown /* Shift the sub-DM definition of the global space to the composite global space */ 8946eb61c8cSJed Brown for (i=0; i<n; i++) { 89586994e45SJed Brown PetscInt subi = indices[i],lo = 0,hi = size,t; 8966eb61c8cSJed Brown /* Binary search to find which rank owns subi */ 8976eb61c8cSJed Brown while (hi-lo > 1) { 8986eb61c8cSJed Brown t = lo + (hi-lo)/2; 8996eb61c8cSJed Brown if (suboff[t] > subi) hi = t; 9006eb61c8cSJed Brown else lo = t; 9016eb61c8cSJed Brown } 9026eb61c8cSJed Brown idx[i] = subi - suboff[lo] + next->grstarts[lo]; 9036eb61c8cSJed Brown } 90486994e45SJed Brown ierr = ISLocalToGlobalMappingRestoreIndices(ltog,&indices);CHKERRQ(ierr); 9056eb61c8cSJed Brown ierr = ISLocalToGlobalMappingCreate(((PetscObject)dm)->comm,n,idx,PETSC_OWN_POINTER,&(*ltogs)[cnt]);CHKERRQ(ierr); 9066eb61c8cSJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 9076eb61c8cSJed Brown } else SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 90847c6ae99SBarry Smith next = next->next; 90947c6ae99SBarry Smith cnt++; 91047c6ae99SBarry Smith } 91147c6ae99SBarry Smith PetscFunctionReturn(0); 91247c6ae99SBarry Smith } 91347c6ae99SBarry Smith 91447c6ae99SBarry Smith #undef __FUNCT__ 91587c85e80SJed Brown #define __FUNCT__ "DMCompositeGetLocalISs" 91687c85e80SJed Brown /*@C 91787c85e80SJed Brown DMCompositeGetLocalISs - Gets index sets for each DM/array component of a composite local vector 91887c85e80SJed Brown 91987c85e80SJed Brown Not Collective 92087c85e80SJed Brown 92187c85e80SJed Brown Input Arguments: 92287c85e80SJed Brown . dm - composite DM 92387c85e80SJed Brown 92487c85e80SJed Brown Output Arguments: 92587c85e80SJed Brown . is - array of serial index sets for each each component of the DMComposite 92687c85e80SJed Brown 92787c85e80SJed Brown Level: intermediate 92887c85e80SJed Brown 92987c85e80SJed Brown Notes: 93087c85e80SJed Brown At present, a composite local vector does not normally exist. This function is used to provide index sets for 93187c85e80SJed Brown MatGetLocalSubMatrix(). In the future, the scatters for each entry in the DMComposite may be be merged into a single 93287c85e80SJed Brown scatter to a composite local vector. 93387c85e80SJed Brown 93487c85e80SJed Brown To get the composite global indices at all local points (including ghosts), use DMCompositeGetISLocalToGlobalMappings(). 93587c85e80SJed Brown 93687c85e80SJed Brown To get index sets for pieces of the composite global vector, use DMCompositeGetGlobalISs(). 93787c85e80SJed Brown 93887c85e80SJed Brown Each returned IS should be destroyed with ISDestroy(), the array should be freed with PetscFree(). 93987c85e80SJed Brown 94087c85e80SJed Brown .seealso: DMCompositeGetGlobalISs(), DMCompositeGetISLocalToGlobalMappings(), MatGetLocalSubMatrix(), MatCreateLocalRef() 94187c85e80SJed Brown @*/ 9427087cfbeSBarry Smith PetscErrorCode DMCompositeGetLocalISs(DM dm,IS **is) 94387c85e80SJed Brown { 94487c85e80SJed Brown PetscErrorCode ierr; 94587c85e80SJed Brown DM_Composite *com = (DM_Composite*)dm->data; 94687c85e80SJed Brown struct DMCompositeLink *link; 94787c85e80SJed Brown PetscInt cnt,start; 94887c85e80SJed Brown 94987c85e80SJed Brown PetscFunctionBegin; 95087c85e80SJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 95187c85e80SJed Brown PetscValidPointer(is,2); 95287c85e80SJed Brown ierr = PetscMalloc(com->nmine*sizeof(IS),is);CHKERRQ(ierr); 95306ebdd98SJed Brown for (cnt=0,start=0,link=com->next; link; start+=link->nlocal,cnt++,link=link->next) { 95406ebdd98SJed Brown ierr = ISCreateStride(PETSC_COMM_SELF,link->nlocal,start,1,&(*is)[cnt]);CHKERRQ(ierr); 955520db06cSJed Brown if (link->type == DMCOMPOSITE_DM) { 956520db06cSJed Brown PetscInt bs; 9571411c6eeSJed Brown ierr = DMGetBlockSize(link->dm,&bs);CHKERRQ(ierr); 958520db06cSJed Brown ierr = ISSetBlockSize((*is)[cnt],bs);CHKERRQ(ierr); 959520db06cSJed Brown } 96087c85e80SJed Brown } 96187c85e80SJed Brown PetscFunctionReturn(0); 96287c85e80SJed Brown } 96387c85e80SJed Brown 96487c85e80SJed Brown #undef __FUNCT__ 96547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetGlobalISs" 96647c6ae99SBarry Smith /*@C 96747c6ae99SBarry Smith DMCompositeGetGlobalISs - Gets the index sets for each composed object 96847c6ae99SBarry Smith 96947c6ae99SBarry Smith Collective on DMComposite 97047c6ae99SBarry Smith 97147c6ae99SBarry Smith Input Parameter: 97247c6ae99SBarry Smith . dm - the packer object 97347c6ae99SBarry Smith 97447c6ae99SBarry Smith Output Parameters: 97547c6ae99SBarry Smith . is - the array of index sets 97647c6ae99SBarry Smith 97747c6ae99SBarry Smith Level: advanced 97847c6ae99SBarry Smith 97947c6ae99SBarry Smith Notes: 98047c6ae99SBarry Smith The is entries should be destroyed with ISDestroy(), the is array should be freed with PetscFree() 98147c6ae99SBarry Smith 98247c6ae99SBarry Smith These could be used to extract a subset of vector entries for a "multi-physics" preconditioner 98347c6ae99SBarry Smith 9846eb61c8cSJed Brown Use DMCompositeGetLocalISs() for index sets in the packed local numbering, and 9856eb61c8cSJed Brown DMCompositeGetISLocalToGlobalMappings() for to map local sub-DM (including ghost) indices to packed global 9866eb61c8cSJed Brown indices. 98747c6ae99SBarry Smith 9880c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 98947c6ae99SBarry Smith DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(), 99047c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries() 99147c6ae99SBarry Smith 99247c6ae99SBarry Smith @*/ 9936eb61c8cSJed Brown 9947087cfbeSBarry Smith PetscErrorCode DMCompositeGetGlobalISs(DM dm,IS *is[]) 99547c6ae99SBarry Smith { 99647c6ae99SBarry Smith PetscErrorCode ierr; 99747c6ae99SBarry Smith PetscInt cnt = 0,*idx,i; 99847c6ae99SBarry Smith struct DMCompositeLink *next; 99947c6ae99SBarry Smith PetscMPIInt rank; 100047c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 100147c6ae99SBarry Smith 100247c6ae99SBarry Smith PetscFunctionBegin; 100347c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 100406ebdd98SJed Brown ierr = PetscMalloc((com->nDM+com->nredundant)*sizeof(IS),is);CHKERRQ(ierr); 100547c6ae99SBarry Smith next = com->next; 100647c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 100747c6ae99SBarry Smith 100847c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 100947c6ae99SBarry Smith while (next) { 101047c6ae99SBarry Smith ierr = PetscMalloc(next->n*sizeof(PetscInt),&idx);CHKERRQ(ierr); 101147c6ae99SBarry Smith for (i=0; i<next->n; i++) idx[i] = next->grstart + i; 101247c6ae99SBarry Smith ierr = ISCreateGeneral(((PetscObject)dm)->comm,next->n,idx,PETSC_OWN_POINTER,&(*is)[cnt]);CHKERRQ(ierr); 101347c6ae99SBarry Smith cnt++; 101447c6ae99SBarry Smith next = next->next; 101547c6ae99SBarry Smith } 101647c6ae99SBarry Smith PetscFunctionReturn(0); 101747c6ae99SBarry Smith } 101847c6ae99SBarry Smith 101947c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 102047c6ae99SBarry Smith #undef __FUNCT__ 102147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors_Array" 102247c6ae99SBarry Smith PetscErrorCode DMCompositeGetLocalVectors_Array(DM dm,struct DMCompositeLink *mine,PetscScalar **array) 102347c6ae99SBarry Smith { 102447c6ae99SBarry Smith PetscErrorCode ierr; 102547c6ae99SBarry Smith PetscFunctionBegin; 102647c6ae99SBarry Smith if (array) { 1027c72eef85SJed Brown ierr = PetscMalloc(mine->nlocal*sizeof(PetscScalar),array);CHKERRQ(ierr); 102847c6ae99SBarry Smith } 102947c6ae99SBarry Smith PetscFunctionReturn(0); 103047c6ae99SBarry Smith } 103147c6ae99SBarry Smith 103247c6ae99SBarry Smith #undef __FUNCT__ 103347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors_DM" 103447c6ae99SBarry Smith PetscErrorCode DMCompositeGetLocalVectors_DM(DM dm,struct DMCompositeLink *mine,Vec *local) 103547c6ae99SBarry Smith { 103647c6ae99SBarry Smith PetscErrorCode ierr; 103747c6ae99SBarry Smith PetscFunctionBegin; 103847c6ae99SBarry Smith if (local) { 103947c6ae99SBarry Smith ierr = DMGetLocalVector(mine->dm,local);CHKERRQ(ierr); 104047c6ae99SBarry Smith } 104147c6ae99SBarry Smith PetscFunctionReturn(0); 104247c6ae99SBarry Smith } 104347c6ae99SBarry Smith 104447c6ae99SBarry Smith #undef __FUNCT__ 104547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors_Array" 104647c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreLocalVectors_Array(DM dm,struct DMCompositeLink *mine,PetscScalar **array) 104747c6ae99SBarry Smith { 104847c6ae99SBarry Smith PetscErrorCode ierr; 104947c6ae99SBarry Smith PetscFunctionBegin; 105047c6ae99SBarry Smith if (array) { 105147c6ae99SBarry Smith ierr = PetscFree(*array);CHKERRQ(ierr); 105247c6ae99SBarry Smith } 105347c6ae99SBarry Smith PetscFunctionReturn(0); 105447c6ae99SBarry Smith } 105547c6ae99SBarry Smith 105647c6ae99SBarry Smith #undef __FUNCT__ 105747c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors_DM" 105847c6ae99SBarry Smith PetscErrorCode DMCompositeRestoreLocalVectors_DM(DM dm,struct DMCompositeLink *mine,Vec *local) 105947c6ae99SBarry Smith { 106047c6ae99SBarry Smith PetscErrorCode ierr; 106147c6ae99SBarry Smith PetscFunctionBegin; 106247c6ae99SBarry Smith if (local) { 106347c6ae99SBarry Smith ierr = DMRestoreLocalVector(mine->dm,local);CHKERRQ(ierr); 106447c6ae99SBarry Smith } 106547c6ae99SBarry Smith PetscFunctionReturn(0); 106647c6ae99SBarry Smith } 106747c6ae99SBarry Smith 106847c6ae99SBarry Smith #undef __FUNCT__ 106947c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors" 107047c6ae99SBarry Smith /*@C 107147c6ae99SBarry Smith DMCompositeGetLocalVectors - Gets local vectors and arrays for each part of a DMComposite. 107247c6ae99SBarry Smith Use DMCompositeRestoreLocalVectors() to return them. 107347c6ae99SBarry Smith 107447c6ae99SBarry Smith Not Collective 107547c6ae99SBarry Smith 107647c6ae99SBarry Smith Input Parameter: 107747c6ae99SBarry Smith . dm - the packer object 107847c6ae99SBarry Smith 107947c6ae99SBarry Smith Output Parameter: 108047c6ae99SBarry Smith . ... - the individual sequential objects (arrays or vectors) 108147c6ae99SBarry Smith 108247c6ae99SBarry Smith Level: advanced 108347c6ae99SBarry Smith 10840c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 10856eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 108647c6ae99SBarry Smith DMCompositeRestoreLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries() 108747c6ae99SBarry Smith 108847c6ae99SBarry Smith @*/ 10897087cfbeSBarry Smith PetscErrorCode DMCompositeGetLocalVectors(DM dm,...) 109047c6ae99SBarry Smith { 109147c6ae99SBarry Smith va_list Argp; 109247c6ae99SBarry Smith PetscErrorCode ierr; 109347c6ae99SBarry Smith struct DMCompositeLink *next; 109447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 109547c6ae99SBarry Smith 109647c6ae99SBarry Smith PetscFunctionBegin; 109747c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 109847c6ae99SBarry Smith next = com->next; 109947c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 110047c6ae99SBarry Smith va_start(Argp,dm); 110147c6ae99SBarry Smith while (next) { 110247c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 110347c6ae99SBarry Smith PetscScalar **array; 110447c6ae99SBarry Smith array = va_arg(Argp, PetscScalar**); 110547c6ae99SBarry Smith ierr = DMCompositeGetLocalVectors_Array(dm,next,array);CHKERRQ(ierr); 110647c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 110747c6ae99SBarry Smith Vec *vec; 110847c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 110947c6ae99SBarry Smith ierr = DMCompositeGetLocalVectors_DM(dm,next,vec);CHKERRQ(ierr); 111047c6ae99SBarry Smith } else { 111147c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 111247c6ae99SBarry Smith } 111347c6ae99SBarry Smith next = next->next; 111447c6ae99SBarry Smith } 111547c6ae99SBarry Smith va_end(Argp); 111647c6ae99SBarry Smith PetscFunctionReturn(0); 111747c6ae99SBarry Smith } 111847c6ae99SBarry Smith 111947c6ae99SBarry Smith #undef __FUNCT__ 112047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors" 112147c6ae99SBarry Smith /*@C 112247c6ae99SBarry Smith DMCompositeRestoreLocalVectors - Restores local vectors and arrays for each part of a DMComposite. 112347c6ae99SBarry Smith 112447c6ae99SBarry Smith Not Collective 112547c6ae99SBarry Smith 112647c6ae99SBarry Smith Input Parameter: 112747c6ae99SBarry Smith . dm - the packer object 112847c6ae99SBarry Smith 112947c6ae99SBarry Smith Output Parameter: 113047c6ae99SBarry Smith . ... - the individual sequential objects (arrays or vectors) 113147c6ae99SBarry Smith 113247c6ae99SBarry Smith Level: advanced 113347c6ae99SBarry Smith 11340c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 11356eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 113647c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries() 113747c6ae99SBarry Smith 113847c6ae99SBarry Smith @*/ 11397087cfbeSBarry Smith PetscErrorCode DMCompositeRestoreLocalVectors(DM dm,...) 114047c6ae99SBarry Smith { 114147c6ae99SBarry Smith va_list Argp; 114247c6ae99SBarry Smith PetscErrorCode ierr; 114347c6ae99SBarry Smith struct DMCompositeLink *next; 114447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 114547c6ae99SBarry Smith 114647c6ae99SBarry Smith PetscFunctionBegin; 114747c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 114847c6ae99SBarry Smith next = com->next; 114947c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 115047c6ae99SBarry Smith va_start(Argp,dm); 115147c6ae99SBarry Smith while (next) { 115247c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 115347c6ae99SBarry Smith PetscScalar **array; 115447c6ae99SBarry Smith array = va_arg(Argp, PetscScalar**); 115547c6ae99SBarry Smith ierr = DMCompositeRestoreLocalVectors_Array(dm,next,array);CHKERRQ(ierr); 115647c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 115747c6ae99SBarry Smith Vec *vec; 115847c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 115947c6ae99SBarry Smith ierr = DMCompositeRestoreLocalVectors_DM(dm,next,vec);CHKERRQ(ierr); 116047c6ae99SBarry Smith } else { 116147c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 116247c6ae99SBarry Smith } 116347c6ae99SBarry Smith next = next->next; 116447c6ae99SBarry Smith } 116547c6ae99SBarry Smith va_end(Argp); 116647c6ae99SBarry Smith PetscFunctionReturn(0); 116747c6ae99SBarry Smith } 116847c6ae99SBarry Smith 116947c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 117047c6ae99SBarry Smith #undef __FUNCT__ 117147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries_Array" 117247c6ae99SBarry Smith PetscErrorCode DMCompositeGetEntries_Array(DM dm,struct DMCompositeLink *mine,PetscInt *n) 117347c6ae99SBarry Smith { 117447c6ae99SBarry Smith PetscFunctionBegin; 117506ebdd98SJed Brown if (n) *n = mine->nlocal; 117647c6ae99SBarry Smith PetscFunctionReturn(0); 117747c6ae99SBarry Smith } 117847c6ae99SBarry Smith 117947c6ae99SBarry Smith #undef __FUNCT__ 118047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries_DM" 118147c6ae99SBarry Smith PetscErrorCode DMCompositeGetEntries_DM(DM dmi,struct DMCompositeLink *mine,DM *dm) 118247c6ae99SBarry Smith { 118347c6ae99SBarry Smith PetscFunctionBegin; 118447c6ae99SBarry Smith if (dm) *dm = mine->dm; 118547c6ae99SBarry Smith PetscFunctionReturn(0); 118647c6ae99SBarry Smith } 118747c6ae99SBarry Smith 118847c6ae99SBarry Smith #undef __FUNCT__ 118947c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries" 119047c6ae99SBarry Smith /*@C 1191aa219208SBarry Smith DMCompositeGetEntries - Gets the DM, redundant size, etc for each entry in a DMComposite. 119247c6ae99SBarry Smith 119347c6ae99SBarry Smith Not Collective 119447c6ae99SBarry Smith 119547c6ae99SBarry Smith Input Parameter: 119647c6ae99SBarry Smith . dm - the packer object 119747c6ae99SBarry Smith 119847c6ae99SBarry Smith Output Parameter: 1199aa219208SBarry Smith . ... - the individual entries, DMs or integer sizes) 120047c6ae99SBarry Smith 120147c6ae99SBarry Smith Level: advanced 120247c6ae99SBarry Smith 12030c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCreateGlobalVector(), 12046eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 120547c6ae99SBarry Smith DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(), DMCompositeScatter(), 120647c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors() 120747c6ae99SBarry Smith 120847c6ae99SBarry Smith @*/ 12097087cfbeSBarry Smith PetscErrorCode DMCompositeGetEntries(DM dm,...) 121047c6ae99SBarry Smith { 121147c6ae99SBarry Smith va_list Argp; 121247c6ae99SBarry Smith PetscErrorCode ierr; 121347c6ae99SBarry Smith struct DMCompositeLink *next; 121447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 121547c6ae99SBarry Smith 121647c6ae99SBarry Smith PetscFunctionBegin; 121747c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 121847c6ae99SBarry Smith next = com->next; 121947c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 122047c6ae99SBarry Smith va_start(Argp,dm); 122147c6ae99SBarry Smith while (next) { 122247c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 122347c6ae99SBarry Smith PetscInt *n; 122447c6ae99SBarry Smith n = va_arg(Argp, PetscInt*); 122547c6ae99SBarry Smith ierr = DMCompositeGetEntries_Array(dm,next,n);CHKERRQ(ierr); 122647c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 122747c6ae99SBarry Smith DM *dmn; 122847c6ae99SBarry Smith dmn = va_arg(Argp, DM*); 122947c6ae99SBarry Smith ierr = DMCompositeGetEntries_DM(dm,next,dmn);CHKERRQ(ierr); 123047c6ae99SBarry Smith } else { 123147c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 123247c6ae99SBarry Smith } 123347c6ae99SBarry Smith next = next->next; 123447c6ae99SBarry Smith } 123547c6ae99SBarry Smith va_end(Argp); 123647c6ae99SBarry Smith PetscFunctionReturn(0); 123747c6ae99SBarry Smith } 123847c6ae99SBarry Smith 123947c6ae99SBarry Smith #undef __FUNCT__ 12400c010503SBarry Smith #define __FUNCT__ "DMRefine_Composite" 12417087cfbeSBarry Smith PetscErrorCode DMRefine_Composite(DM dmi,MPI_Comm comm,DM *fine) 124247c6ae99SBarry Smith { 124347c6ae99SBarry Smith PetscErrorCode ierr; 124447c6ae99SBarry Smith struct DMCompositeLink *next; 124547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dmi->data; 124647c6ae99SBarry Smith DM dm; 124747c6ae99SBarry Smith 124847c6ae99SBarry Smith PetscFunctionBegin; 124947c6ae99SBarry Smith PetscValidHeaderSpecific(dmi,DM_CLASSID,1); 125047c6ae99SBarry Smith next = com->next; 125147c6ae99SBarry Smith ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr); 125247c6ae99SBarry Smith 125347c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 125447c6ae99SBarry Smith while (next) { 125547c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 125606ebdd98SJed Brown ierr = DMCompositeAddArray(*fine,next->rank,next->nlocal);CHKERRQ(ierr); 125747c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 125847c6ae99SBarry Smith ierr = DMRefine(next->dm,comm,&dm);CHKERRQ(ierr); 125947c6ae99SBarry Smith ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr); 126047c6ae99SBarry Smith ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr); 126147c6ae99SBarry Smith } else { 126247c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 126347c6ae99SBarry Smith } 126447c6ae99SBarry Smith next = next->next; 126547c6ae99SBarry Smith } 126647c6ae99SBarry Smith PetscFunctionReturn(0); 126747c6ae99SBarry Smith } 126847c6ae99SBarry Smith 126947c6ae99SBarry Smith #include "petscmat.h" 127047c6ae99SBarry Smith 127147c6ae99SBarry Smith struct MatPackLink { 127247c6ae99SBarry Smith Mat A; 127347c6ae99SBarry Smith struct MatPackLink *next; 127447c6ae99SBarry Smith }; 127547c6ae99SBarry Smith 127647c6ae99SBarry Smith struct MatPack { 127747c6ae99SBarry Smith DM right,left; 127847c6ae99SBarry Smith struct MatPackLink *next; 127947c6ae99SBarry Smith }; 128047c6ae99SBarry Smith 128147c6ae99SBarry Smith #undef __FUNCT__ 128247c6ae99SBarry Smith #define __FUNCT__ "MatMultBoth_Shell_Pack" 128347c6ae99SBarry Smith PetscErrorCode MatMultBoth_Shell_Pack(Mat A,Vec x,Vec y,PetscBool add) 128447c6ae99SBarry Smith { 128547c6ae99SBarry Smith struct MatPack *mpack; 128647c6ae99SBarry Smith struct DMCompositeLink *xnext,*ynext; 128747c6ae99SBarry Smith struct MatPackLink *anext; 128847c6ae99SBarry Smith PetscScalar *xarray,*yarray; 128947c6ae99SBarry Smith PetscErrorCode ierr; 129047c6ae99SBarry Smith PetscInt i; 129147c6ae99SBarry Smith Vec xglobal,yglobal; 129247c6ae99SBarry Smith PetscMPIInt rank; 129347c6ae99SBarry Smith DM_Composite *comright; 129447c6ae99SBarry Smith DM_Composite *comleft; 129547c6ae99SBarry Smith 129647c6ae99SBarry Smith PetscFunctionBegin; 129747c6ae99SBarry Smith ierr = MatShellGetContext(A,(void**)&mpack);CHKERRQ(ierr); 129847c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)mpack->right)->comm,&rank);CHKERRQ(ierr); 129947c6ae99SBarry Smith comright = (DM_Composite*)mpack->right->data; 130047c6ae99SBarry Smith comleft = (DM_Composite*)mpack->left->data; 130147c6ae99SBarry Smith xnext = comright->next; 130247c6ae99SBarry Smith ynext = comleft->next; 130347c6ae99SBarry Smith anext = mpack->next; 130447c6ae99SBarry Smith 130547c6ae99SBarry Smith while (xnext) { 130647c6ae99SBarry Smith if (xnext->type == DMCOMPOSITE_ARRAY) { 130747c6ae99SBarry Smith if (rank == xnext->rank) { 130847c6ae99SBarry Smith ierr = VecGetArray(x,&xarray);CHKERRQ(ierr); 130947c6ae99SBarry Smith ierr = VecGetArray(y,&yarray);CHKERRQ(ierr); 131047c6ae99SBarry Smith if (add) { 131147c6ae99SBarry Smith for (i=0; i<xnext->n; i++) { 131247c6ae99SBarry Smith yarray[ynext->rstart+i] += xarray[xnext->rstart+i]; 131347c6ae99SBarry Smith } 131447c6ae99SBarry Smith } else { 131547c6ae99SBarry Smith ierr = PetscMemcpy(yarray+ynext->rstart,xarray+xnext->rstart,xnext->n*sizeof(PetscScalar));CHKERRQ(ierr); 131647c6ae99SBarry Smith } 131747c6ae99SBarry Smith ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr); 131847c6ae99SBarry Smith ierr = VecRestoreArray(y,&yarray);CHKERRQ(ierr); 131947c6ae99SBarry Smith } 132047c6ae99SBarry Smith } else if (xnext->type == DMCOMPOSITE_DM) { 132147c6ae99SBarry Smith ierr = VecGetArray(x,&xarray);CHKERRQ(ierr); 132247c6ae99SBarry Smith ierr = VecGetArray(y,&yarray);CHKERRQ(ierr); 132347c6ae99SBarry Smith ierr = DMGetGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr); 132447c6ae99SBarry Smith ierr = DMGetGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr); 132547c6ae99SBarry Smith ierr = VecPlaceArray(xglobal,xarray+xnext->rstart);CHKERRQ(ierr); 132647c6ae99SBarry Smith ierr = VecPlaceArray(yglobal,yarray+ynext->rstart);CHKERRQ(ierr); 132747c6ae99SBarry Smith if (add) { 132847c6ae99SBarry Smith ierr = MatMultAdd(anext->A,xglobal,yglobal,yglobal);CHKERRQ(ierr); 132947c6ae99SBarry Smith } else { 133047c6ae99SBarry Smith ierr = MatMult(anext->A,xglobal,yglobal);CHKERRQ(ierr); 133147c6ae99SBarry Smith } 133247c6ae99SBarry Smith ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr); 133347c6ae99SBarry Smith ierr = VecRestoreArray(y,&yarray);CHKERRQ(ierr); 133447c6ae99SBarry Smith ierr = VecResetArray(xglobal);CHKERRQ(ierr); 133547c6ae99SBarry Smith ierr = VecResetArray(yglobal);CHKERRQ(ierr); 133647c6ae99SBarry Smith ierr = DMRestoreGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr); 133747c6ae99SBarry Smith ierr = DMRestoreGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr); 133847c6ae99SBarry Smith anext = anext->next; 133947c6ae99SBarry Smith } else { 134047c6ae99SBarry Smith SETERRQ(((PetscObject)A)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 134147c6ae99SBarry Smith } 134247c6ae99SBarry Smith xnext = xnext->next; 134347c6ae99SBarry Smith ynext = ynext->next; 134447c6ae99SBarry Smith } 134547c6ae99SBarry Smith PetscFunctionReturn(0); 134647c6ae99SBarry Smith } 134747c6ae99SBarry Smith 134847c6ae99SBarry Smith #undef __FUNCT__ 134947c6ae99SBarry Smith #define __FUNCT__ "MatMultAdd_Shell_Pack" 135047c6ae99SBarry Smith PetscErrorCode MatMultAdd_Shell_Pack(Mat A,Vec x,Vec y,Vec z) 135147c6ae99SBarry Smith { 135247c6ae99SBarry Smith PetscErrorCode ierr; 135347c6ae99SBarry Smith PetscFunctionBegin; 135447c6ae99SBarry Smith if (z != y) SETERRQ(((PetscObject)A)->comm,PETSC_ERR_SUP,"Handles y == z only"); 135547c6ae99SBarry Smith ierr = MatMultBoth_Shell_Pack(A,x,y,PETSC_TRUE);CHKERRQ(ierr); 135647c6ae99SBarry Smith PetscFunctionReturn(0); 135747c6ae99SBarry Smith } 135847c6ae99SBarry Smith 135947c6ae99SBarry Smith #undef __FUNCT__ 136047c6ae99SBarry Smith #define __FUNCT__ "MatMult_Shell_Pack" 136147c6ae99SBarry Smith PetscErrorCode MatMult_Shell_Pack(Mat A,Vec x,Vec y) 136247c6ae99SBarry Smith { 136347c6ae99SBarry Smith PetscErrorCode ierr; 136447c6ae99SBarry Smith PetscFunctionBegin; 136547c6ae99SBarry Smith ierr = MatMultBoth_Shell_Pack(A,x,y,PETSC_FALSE);CHKERRQ(ierr); 136647c6ae99SBarry Smith PetscFunctionReturn(0); 136747c6ae99SBarry Smith } 136847c6ae99SBarry Smith 136947c6ae99SBarry Smith #undef __FUNCT__ 137047c6ae99SBarry Smith #define __FUNCT__ "MatMultTranspose_Shell_Pack" 137147c6ae99SBarry Smith PetscErrorCode MatMultTranspose_Shell_Pack(Mat A,Vec x,Vec y) 137247c6ae99SBarry Smith { 137347c6ae99SBarry Smith struct MatPack *mpack; 137447c6ae99SBarry Smith struct DMCompositeLink *xnext,*ynext; 137547c6ae99SBarry Smith struct MatPackLink *anext; 137647c6ae99SBarry Smith PetscScalar *xarray,*yarray; 137747c6ae99SBarry Smith PetscErrorCode ierr; 137847c6ae99SBarry Smith Vec xglobal,yglobal; 137947c6ae99SBarry Smith PetscMPIInt rank; 138047c6ae99SBarry Smith DM_Composite *comright; 138147c6ae99SBarry Smith DM_Composite *comleft; 138247c6ae99SBarry Smith 138347c6ae99SBarry Smith PetscFunctionBegin; 138447c6ae99SBarry Smith ierr = MatShellGetContext(A,(void**)&mpack);CHKERRQ(ierr); 138547c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)mpack->right)->comm,&rank);CHKERRQ(ierr); 138647c6ae99SBarry Smith comright = (DM_Composite*)mpack->right->data; 138747c6ae99SBarry Smith comleft = (DM_Composite*)mpack->left->data; 138847c6ae99SBarry Smith ynext = comright->next; 138947c6ae99SBarry Smith xnext = comleft->next; 139047c6ae99SBarry Smith anext = mpack->next; 139147c6ae99SBarry Smith 139247c6ae99SBarry Smith while (xnext) { 139347c6ae99SBarry Smith if (xnext->type == DMCOMPOSITE_ARRAY) { 139447c6ae99SBarry Smith if (rank == ynext->rank) { 139547c6ae99SBarry Smith ierr = VecGetArray(x,&xarray);CHKERRQ(ierr); 139647c6ae99SBarry Smith ierr = VecGetArray(y,&yarray);CHKERRQ(ierr); 139747c6ae99SBarry Smith ierr = PetscMemcpy(yarray+ynext->rstart,xarray+xnext->rstart,xnext->n*sizeof(PetscScalar));CHKERRQ(ierr); 139847c6ae99SBarry Smith ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr); 139947c6ae99SBarry Smith ierr = VecRestoreArray(y,&yarray);CHKERRQ(ierr); 140047c6ae99SBarry Smith } 140147c6ae99SBarry Smith } else if (xnext->type == DMCOMPOSITE_DM) { 140247c6ae99SBarry Smith ierr = VecGetArray(x,&xarray);CHKERRQ(ierr); 140347c6ae99SBarry Smith ierr = VecGetArray(y,&yarray);CHKERRQ(ierr); 140447c6ae99SBarry Smith ierr = DMGetGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr); 140547c6ae99SBarry Smith ierr = DMGetGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr); 140647c6ae99SBarry Smith ierr = VecPlaceArray(xglobal,xarray+xnext->rstart);CHKERRQ(ierr); 140747c6ae99SBarry Smith ierr = VecPlaceArray(yglobal,yarray+ynext->rstart);CHKERRQ(ierr); 140847c6ae99SBarry Smith ierr = MatMultTranspose(anext->A,xglobal,yglobal);CHKERRQ(ierr); 140947c6ae99SBarry Smith ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr); 141047c6ae99SBarry Smith ierr = VecRestoreArray(y,&yarray);CHKERRQ(ierr); 141147c6ae99SBarry Smith ierr = VecResetArray(xglobal);CHKERRQ(ierr); 141247c6ae99SBarry Smith ierr = VecResetArray(yglobal);CHKERRQ(ierr); 141347c6ae99SBarry Smith ierr = DMRestoreGlobalVector(xnext->dm,&xglobal);CHKERRQ(ierr); 141447c6ae99SBarry Smith ierr = DMRestoreGlobalVector(ynext->dm,&yglobal);CHKERRQ(ierr); 141547c6ae99SBarry Smith anext = anext->next; 141647c6ae99SBarry Smith } else { 141747c6ae99SBarry Smith SETERRQ(((PetscObject)A)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 141847c6ae99SBarry Smith } 141947c6ae99SBarry Smith xnext = xnext->next; 142047c6ae99SBarry Smith ynext = ynext->next; 142147c6ae99SBarry Smith } 142247c6ae99SBarry Smith PetscFunctionReturn(0); 142347c6ae99SBarry Smith } 142447c6ae99SBarry Smith 142547c6ae99SBarry Smith #undef __FUNCT__ 142647c6ae99SBarry Smith #define __FUNCT__ "MatDestroy_Shell_Pack" 142747c6ae99SBarry Smith PetscErrorCode MatDestroy_Shell_Pack(Mat A) 142847c6ae99SBarry Smith { 142947c6ae99SBarry Smith struct MatPack *mpack; 143047c6ae99SBarry Smith struct MatPackLink *anext,*oldanext; 143147c6ae99SBarry Smith PetscErrorCode ierr; 143247c6ae99SBarry Smith 143347c6ae99SBarry Smith PetscFunctionBegin; 143447c6ae99SBarry Smith ierr = MatShellGetContext(A,(void**)&mpack);CHKERRQ(ierr); 143547c6ae99SBarry Smith anext = mpack->next; 143647c6ae99SBarry Smith 143747c6ae99SBarry Smith while (anext) { 143847c6ae99SBarry Smith ierr = MatDestroy(anext->A);CHKERRQ(ierr); 143947c6ae99SBarry Smith oldanext = anext; 144047c6ae99SBarry Smith anext = anext->next; 144147c6ae99SBarry Smith ierr = PetscFree(oldanext);CHKERRQ(ierr); 144247c6ae99SBarry Smith } 144347c6ae99SBarry Smith ierr = PetscFree(mpack);CHKERRQ(ierr); 144447c6ae99SBarry Smith ierr = PetscObjectChangeTypeName((PetscObject)A,0);CHKERRQ(ierr); 144547c6ae99SBarry Smith PetscFunctionReturn(0); 144647c6ae99SBarry Smith } 144747c6ae99SBarry Smith 144847c6ae99SBarry Smith #undef __FUNCT__ 14490c010503SBarry Smith #define __FUNCT__ "DMGetInterpolation_Composite" 14507087cfbeSBarry Smith PetscErrorCode DMGetInterpolation_Composite(DM coarse,DM fine,Mat *A,Vec *v) 145147c6ae99SBarry Smith { 145247c6ae99SBarry Smith PetscErrorCode ierr; 145347c6ae99SBarry Smith PetscInt m,n,M,N; 145447c6ae99SBarry Smith struct DMCompositeLink *nextc; 145547c6ae99SBarry Smith struct DMCompositeLink *nextf; 145647c6ae99SBarry Smith struct MatPackLink *nextmat,*pnextmat = 0; 145747c6ae99SBarry Smith struct MatPack *mpack; 145847c6ae99SBarry Smith Vec gcoarse,gfine; 145947c6ae99SBarry Smith DM_Composite *comcoarse = (DM_Composite*)coarse->data; 146047c6ae99SBarry Smith DM_Composite *comfine = (DM_Composite*)fine->data; 146147c6ae99SBarry Smith 146247c6ae99SBarry Smith PetscFunctionBegin; 146347c6ae99SBarry Smith PetscValidHeaderSpecific(coarse,DM_CLASSID,1); 146447c6ae99SBarry Smith PetscValidHeaderSpecific(fine,DM_CLASSID,2); 146547c6ae99SBarry Smith nextc = comcoarse->next; 146647c6ae99SBarry Smith nextf = comfine->next; 146747c6ae99SBarry Smith /* use global vectors only for determining matrix layout */ 14680c010503SBarry Smith ierr = DMCreateGlobalVector(coarse,&gcoarse);CHKERRQ(ierr); 14690c010503SBarry Smith ierr = DMCreateGlobalVector(fine,&gfine);CHKERRQ(ierr); 147047c6ae99SBarry Smith ierr = VecGetLocalSize(gcoarse,&n);CHKERRQ(ierr); 147147c6ae99SBarry Smith ierr = VecGetLocalSize(gfine,&m);CHKERRQ(ierr); 147247c6ae99SBarry Smith ierr = VecGetSize(gcoarse,&N);CHKERRQ(ierr); 147347c6ae99SBarry Smith ierr = VecGetSize(gfine,&M);CHKERRQ(ierr); 147447c6ae99SBarry Smith ierr = VecDestroy(gcoarse);CHKERRQ(ierr); 147547c6ae99SBarry Smith ierr = VecDestroy(gfine);CHKERRQ(ierr); 147647c6ae99SBarry Smith 147747c6ae99SBarry Smith ierr = PetscNew(struct MatPack,&mpack);CHKERRQ(ierr); 147847c6ae99SBarry Smith mpack->right = coarse; 147947c6ae99SBarry Smith mpack->left = fine; 148047c6ae99SBarry Smith ierr = MatCreate(((PetscObject)fine)->comm,A);CHKERRQ(ierr); 148147c6ae99SBarry Smith ierr = MatSetSizes(*A,m,n,M,N);CHKERRQ(ierr); 148247c6ae99SBarry Smith ierr = MatSetType(*A,MATSHELL);CHKERRQ(ierr); 148347c6ae99SBarry Smith ierr = MatShellSetContext(*A,mpack);CHKERRQ(ierr); 148447c6ae99SBarry Smith ierr = MatShellSetOperation(*A,MATOP_MULT,(void(*)(void))MatMult_Shell_Pack);CHKERRQ(ierr); 148547c6ae99SBarry Smith ierr = MatShellSetOperation(*A,MATOP_MULT_TRANSPOSE,(void(*)(void))MatMultTranspose_Shell_Pack);CHKERRQ(ierr); 148647c6ae99SBarry Smith ierr = MatShellSetOperation(*A,MATOP_MULT_ADD,(void(*)(void))MatMultAdd_Shell_Pack);CHKERRQ(ierr); 148747c6ae99SBarry Smith ierr = MatShellSetOperation(*A,MATOP_DESTROY,(void(*)(void))MatDestroy_Shell_Pack);CHKERRQ(ierr); 148847c6ae99SBarry Smith 148947c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 149047c6ae99SBarry Smith while (nextc) { 149147c6ae99SBarry Smith if (nextc->type != nextf->type) SETERRQ(((PetscObject)fine)->comm,PETSC_ERR_ARG_INCOMP,"Two DM have different layout"); 149247c6ae99SBarry Smith 149347c6ae99SBarry Smith if (nextc->type == DMCOMPOSITE_ARRAY) { 149447c6ae99SBarry Smith ; 149547c6ae99SBarry Smith } else if (nextc->type == DMCOMPOSITE_DM) { 149647c6ae99SBarry Smith ierr = PetscNew(struct MatPackLink,&nextmat);CHKERRQ(ierr); 149747c6ae99SBarry Smith nextmat->next = 0; 149847c6ae99SBarry Smith if (pnextmat) { 149947c6ae99SBarry Smith pnextmat->next = nextmat; 150047c6ae99SBarry Smith pnextmat = nextmat; 150147c6ae99SBarry Smith } else { 150247c6ae99SBarry Smith pnextmat = nextmat; 150347c6ae99SBarry Smith mpack->next = nextmat; 150447c6ae99SBarry Smith } 150547c6ae99SBarry Smith ierr = DMGetInterpolation(nextc->dm,nextf->dm,&nextmat->A,PETSC_NULL);CHKERRQ(ierr); 150647c6ae99SBarry Smith } else { 150747c6ae99SBarry Smith SETERRQ(((PetscObject)fine)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 150847c6ae99SBarry Smith } 150947c6ae99SBarry Smith nextc = nextc->next; 151047c6ae99SBarry Smith nextf = nextf->next; 151147c6ae99SBarry Smith } 151247c6ae99SBarry Smith PetscFunctionReturn(0); 151347c6ae99SBarry Smith } 151447c6ae99SBarry Smith 151547c6ae99SBarry Smith #undef __FUNCT__ 15161411c6eeSJed Brown #define __FUNCT__ "DMCreateLocalToGlobalMapping_Composite" 15171411c6eeSJed Brown static PetscErrorCode DMCreateLocalToGlobalMapping_Composite(DM dm) 15181411c6eeSJed Brown { 15191411c6eeSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 15201411c6eeSJed Brown ISLocalToGlobalMapping *ltogs; 1521a03f9cedSJed Brown PetscInt i,cnt,m,*idx; 15221411c6eeSJed Brown PetscErrorCode ierr; 15231411c6eeSJed Brown 15241411c6eeSJed Brown PetscFunctionBegin; 15251411c6eeSJed Brown /* Set the ISLocalToGlobalMapping on the new matrix */ 15261411c6eeSJed Brown ierr = DMCompositeGetISLocalToGlobalMappings(dm,<ogs);CHKERRQ(ierr); 15271411c6eeSJed Brown for (cnt=0,i=0; i<(com->nDM+com->nredundant); i++) { 1528a03f9cedSJed Brown ierr = ISLocalToGlobalMappingGetSize(ltogs[i],&m);CHKERRQ(ierr); 1529a03f9cedSJed Brown cnt += m; 1530a03f9cedSJed Brown } 1531a03f9cedSJed Brown ierr = PetscMalloc(cnt*sizeof(PetscInt),&idx);CHKERRQ(ierr); 1532a03f9cedSJed Brown for (cnt=0,i=0; i<(com->nDM+com->nredundant); i++) { 15331411c6eeSJed Brown const PetscInt *subidx; 15341411c6eeSJed Brown ierr = ISLocalToGlobalMappingGetSize(ltogs[i],&m);CHKERRQ(ierr); 15351411c6eeSJed Brown ierr = ISLocalToGlobalMappingGetIndices(ltogs[i],&subidx);CHKERRQ(ierr); 15361411c6eeSJed Brown ierr = PetscMemcpy(&idx[cnt],subidx,m*sizeof(PetscInt));CHKERRQ(ierr); 15371411c6eeSJed Brown ierr = ISLocalToGlobalMappingRestoreIndices(ltogs[i],&subidx);CHKERRQ(ierr); 15381411c6eeSJed Brown cnt += m; 15391411c6eeSJed Brown } 15401411c6eeSJed Brown ierr = ISLocalToGlobalMappingCreate(((PetscObject)dm)->comm,cnt,idx,PETSC_OWN_POINTER,&dm->ltogmap);CHKERRQ(ierr); 15411411c6eeSJed Brown for (i=0; i<com->nDM+com->nredundant; i++) {ierr = ISLocalToGlobalMappingDestroy(ltogs[i]);CHKERRQ(ierr);} 15421411c6eeSJed Brown ierr = PetscFree(ltogs);CHKERRQ(ierr); 15431411c6eeSJed Brown PetscFunctionReturn(0); 15441411c6eeSJed Brown } 15451411c6eeSJed Brown 15461411c6eeSJed Brown 15471411c6eeSJed Brown #undef __FUNCT__ 15480c010503SBarry Smith #define __FUNCT__ "DMGetColoring_Composite" 15497087cfbeSBarry Smith PetscErrorCode DMGetColoring_Composite(DM dm,ISColoringType ctype,const MatType mtype,ISColoring *coloring) 155047c6ae99SBarry Smith { 155147c6ae99SBarry Smith PetscErrorCode ierr; 155247c6ae99SBarry Smith PetscInt n,i,cnt; 155347c6ae99SBarry Smith ISColoringValue *colors; 155447c6ae99SBarry Smith PetscBool dense = PETSC_FALSE; 155547c6ae99SBarry Smith ISColoringValue maxcol = 0; 155647c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 155747c6ae99SBarry Smith 155847c6ae99SBarry Smith PetscFunctionBegin; 155947c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 156047c6ae99SBarry Smith if (ctype == IS_COLORING_GHOSTED) { 156147c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Currently you must use -dmmg_iscoloring_type global" ); 156247c6ae99SBarry Smith } else if (ctype == IS_COLORING_GLOBAL) { 156347c6ae99SBarry Smith n = com->n; 156447c6ae99SBarry Smith } else SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_ARG_OUTOFRANGE,"Unknown ISColoringType"); 156547c6ae99SBarry Smith ierr = PetscMalloc(n*sizeof(ISColoringValue),&colors);CHKERRQ(ierr); /* freed in ISColoringDestroy() */ 156647c6ae99SBarry Smith 1567671f6225SBarry Smith ierr = PetscOptionsGetBool(PETSC_NULL,"-dmcomposite_dense_jacobian",&dense,PETSC_NULL);CHKERRQ(ierr); 156847c6ae99SBarry Smith if (dense) { 156947c6ae99SBarry Smith for (i=0; i<n; i++) { 157047c6ae99SBarry Smith colors[i] = (ISColoringValue)(com->rstart + i); 157147c6ae99SBarry Smith } 157247c6ae99SBarry Smith maxcol = com->N; 157347c6ae99SBarry Smith } else { 157447c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 157547c6ae99SBarry Smith PetscMPIInt rank; 157647c6ae99SBarry Smith 157747c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 157847c6ae99SBarry Smith cnt = 0; 157947c6ae99SBarry Smith while (next) { 158047c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 158147c6ae99SBarry Smith if (rank == next->rank) { /* each column gets is own color */ 158247c6ae99SBarry Smith for (i=com->rstart+next->rstart; i<com->rstart+next->rstart+next->n; i++) { 158347c6ae99SBarry Smith colors[cnt++] = maxcol++; 158447c6ae99SBarry Smith } 158547c6ae99SBarry Smith } 158647c6ae99SBarry Smith ierr = MPI_Bcast(&maxcol,1,MPIU_COLORING_VALUE,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 158747c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 158847c6ae99SBarry Smith ISColoring lcoloring; 158947c6ae99SBarry Smith 159047c6ae99SBarry Smith ierr = DMGetColoring(next->dm,IS_COLORING_GLOBAL,mtype,&lcoloring);CHKERRQ(ierr); 159147c6ae99SBarry Smith for (i=0; i<lcoloring->N; i++) { 159247c6ae99SBarry Smith colors[cnt++] = maxcol + lcoloring->colors[i]; 159347c6ae99SBarry Smith } 159447c6ae99SBarry Smith maxcol += lcoloring->n; 159547c6ae99SBarry Smith ierr = ISColoringDestroy(lcoloring);CHKERRQ(ierr); 159647c6ae99SBarry Smith } else { 159747c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 159847c6ae99SBarry Smith } 159947c6ae99SBarry Smith next = next->next; 160047c6ae99SBarry Smith } 160147c6ae99SBarry Smith } 160247c6ae99SBarry Smith ierr = ISColoringCreate(((PetscObject)dm)->comm,maxcol,n,colors,coloring);CHKERRQ(ierr); 160347c6ae99SBarry Smith PetscFunctionReturn(0); 160447c6ae99SBarry Smith } 160547c6ae99SBarry Smith 160647c6ae99SBarry Smith #undef __FUNCT__ 16070c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalBegin_Composite" 16087087cfbeSBarry Smith PetscErrorCode DMGlobalToLocalBegin_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec) 160947c6ae99SBarry Smith { 161047c6ae99SBarry Smith PetscErrorCode ierr; 161147c6ae99SBarry Smith struct DMCompositeLink *next; 161247c6ae99SBarry Smith PetscInt cnt = 3; 161347c6ae99SBarry Smith PetscMPIInt rank; 161447c6ae99SBarry Smith PetscScalar *garray,*larray; 161547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 161647c6ae99SBarry Smith 161747c6ae99SBarry Smith PetscFunctionBegin; 161847c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 161947c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 162047c6ae99SBarry Smith next = com->next; 162147c6ae99SBarry Smith if (!com->setup) { 1622d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 162347c6ae99SBarry Smith } 162447c6ae99SBarry Smith ierr = MPI_Comm_rank(((PetscObject)dm)->comm,&rank);CHKERRQ(ierr); 162547c6ae99SBarry Smith ierr = VecGetArray(gvec,&garray);CHKERRQ(ierr); 162647c6ae99SBarry Smith ierr = VecGetArray(lvec,&larray);CHKERRQ(ierr); 162747c6ae99SBarry Smith 162847c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 162947c6ae99SBarry Smith while (next) { 163047c6ae99SBarry Smith if (next->type == DMCOMPOSITE_ARRAY) { 163147c6ae99SBarry Smith if (rank == next->rank) { 163247c6ae99SBarry Smith ierr = PetscMemcpy(larray,garray,next->n*sizeof(PetscScalar));CHKERRQ(ierr); 163347c6ae99SBarry Smith garray += next->n; 163447c6ae99SBarry Smith } 163547c6ae99SBarry Smith /* does not handle ADD_VALUES */ 163606ebdd98SJed Brown ierr = MPI_Bcast(larray,next->nlocal,MPIU_SCALAR,next->rank,((PetscObject)dm)->comm);CHKERRQ(ierr); 163747c6ae99SBarry Smith } else if (next->type == DMCOMPOSITE_DM) { 163847c6ae99SBarry Smith Vec local,global; 163947c6ae99SBarry Smith PetscInt N; 164047c6ae99SBarry Smith 164147c6ae99SBarry Smith ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 164247c6ae99SBarry Smith ierr = VecGetLocalSize(global,&N);CHKERRQ(ierr); 164347c6ae99SBarry Smith ierr = VecPlaceArray(global,garray);CHKERRQ(ierr); 164447c6ae99SBarry Smith ierr = DMGetLocalVector(next->dm,&local);CHKERRQ(ierr); 164547c6ae99SBarry Smith ierr = VecPlaceArray(local,larray);CHKERRQ(ierr); 164647c6ae99SBarry Smith ierr = DMGlobalToLocalBegin(next->dm,global,mode,local);CHKERRQ(ierr); 164747c6ae99SBarry Smith ierr = DMGlobalToLocalEnd(next->dm,global,mode,local);CHKERRQ(ierr); 164847c6ae99SBarry Smith ierr = VecResetArray(global);CHKERRQ(ierr); 164947c6ae99SBarry Smith ierr = VecResetArray(local);CHKERRQ(ierr); 165047c6ae99SBarry Smith ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 165147c6ae99SBarry Smith ierr = DMRestoreGlobalVector(next->dm,&local);CHKERRQ(ierr); 165247c6ae99SBarry Smith } else { 165347c6ae99SBarry Smith SETERRQ(((PetscObject)dm)->comm,PETSC_ERR_SUP,"Cannot handle that object type yet"); 165447c6ae99SBarry Smith } 165547c6ae99SBarry Smith cnt++; 165606ebdd98SJed Brown larray += next->nlocal; 165747c6ae99SBarry Smith next = next->next; 165847c6ae99SBarry Smith } 165947c6ae99SBarry Smith 166047c6ae99SBarry Smith ierr = VecRestoreArray(gvec,PETSC_NULL);CHKERRQ(ierr); 166147c6ae99SBarry Smith ierr = VecRestoreArray(lvec,PETSC_NULL);CHKERRQ(ierr); 166247c6ae99SBarry Smith PetscFunctionReturn(0); 166347c6ae99SBarry Smith } 166447c6ae99SBarry Smith 166547c6ae99SBarry Smith #undef __FUNCT__ 16660c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalEnd_Composite" 16677087cfbeSBarry Smith PetscErrorCode DMGlobalToLocalEnd_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec) 16680c010503SBarry Smith { 16690c010503SBarry Smith PetscFunctionBegin; 16700c010503SBarry Smith PetscFunctionReturn(0); 16710c010503SBarry Smith } 167247c6ae99SBarry Smith 1673a4121054SBarry Smith EXTERN_C_BEGIN 1674a4121054SBarry Smith #undef __FUNCT__ 1675a4121054SBarry Smith #define __FUNCT__ "DMCreate_Composite" 16767087cfbeSBarry Smith PetscErrorCode DMCreate_Composite(DM p) 1677a4121054SBarry Smith { 1678a4121054SBarry Smith PetscErrorCode ierr; 1679a4121054SBarry Smith DM_Composite *com; 1680a4121054SBarry Smith 1681a4121054SBarry Smith PetscFunctionBegin; 1682a4121054SBarry Smith ierr = PetscNewLog(p,DM_Composite,&com);CHKERRQ(ierr); 1683a4121054SBarry Smith p->data = com; 1684a4121054SBarry Smith ierr = PetscObjectChangeTypeName((PetscObject)p,"DMComposite");CHKERRQ(ierr); 1685a4121054SBarry Smith com->n = 0; 1686a4121054SBarry Smith com->next = PETSC_NULL; 1687a4121054SBarry Smith com->nredundant = 0; 1688a4121054SBarry Smith com->nDM = 0; 1689a4121054SBarry Smith 1690a4121054SBarry Smith p->ops->createglobalvector = DMCreateGlobalVector_Composite; 1691a4121054SBarry Smith p->ops->createlocalvector = DMCreateLocalVector_Composite; 16921411c6eeSJed Brown p->ops->createlocaltoglobalmapping = DMCreateLocalToGlobalMapping_Composite; 16931411c6eeSJed Brown p->ops->createlocaltoglobalmappingblock = 0; 1694a4121054SBarry Smith p->ops->refine = DMRefine_Composite; 1695a4121054SBarry Smith p->ops->getinterpolation = DMGetInterpolation_Composite; 1696a4121054SBarry Smith p->ops->getmatrix = DMGetMatrix_Composite; 1697a4121054SBarry Smith p->ops->getcoloring = DMGetColoring_Composite; 1698a4121054SBarry Smith p->ops->globaltolocalbegin = DMGlobalToLocalBegin_Composite; 1699a4121054SBarry Smith p->ops->globaltolocalend = DMGlobalToLocalEnd_Composite; 1700a4121054SBarry Smith p->ops->destroy = DMDestroy_Composite; 1701a4121054SBarry Smith p->ops->view = DMView_Composite; 1702a4121054SBarry Smith p->ops->setup = DMSetUp_Composite; 1703a4121054SBarry Smith PetscFunctionReturn(0); 1704a4121054SBarry Smith } 1705a4121054SBarry Smith EXTERN_C_END 1706a4121054SBarry Smith 17070c010503SBarry Smith #undef __FUNCT__ 17080c010503SBarry Smith #define __FUNCT__ "DMCompositeCreate" 17090c010503SBarry Smith /*@C 17100c010503SBarry Smith DMCompositeCreate - Creates a vector packer, used to generate "composite" 17110c010503SBarry Smith vectors made up of several subvectors. 17120c010503SBarry Smith 17130c010503SBarry Smith Collective on MPI_Comm 171447c6ae99SBarry Smith 171547c6ae99SBarry Smith Input Parameter: 17160c010503SBarry Smith . comm - the processors that will share the global vector 17170c010503SBarry Smith 17180c010503SBarry Smith Output Parameters: 17190c010503SBarry Smith . packer - the packer object 172047c6ae99SBarry Smith 172147c6ae99SBarry Smith Level: advanced 172247c6ae99SBarry Smith 17230c010503SBarry Smith .seealso DMDestroy(), DMCompositeAddArray(), DMCompositeAddDM(), DMCompositeScatter(), 17246eb61c8cSJed Brown DMCompositeGather(), DMCreateGlobalVector(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess() 172547c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 172647c6ae99SBarry Smith 172747c6ae99SBarry Smith @*/ 17287087cfbeSBarry Smith PetscErrorCode DMCompositeCreate(MPI_Comm comm,DM *packer) 172947c6ae99SBarry Smith { 17300c010503SBarry Smith PetscErrorCode ierr; 17310c010503SBarry Smith 173247c6ae99SBarry Smith PetscFunctionBegin; 17330c010503SBarry Smith PetscValidPointer(packer,2); 1734a4121054SBarry Smith ierr = DMCreate(comm,packer);CHKERRQ(ierr); 1735a4121054SBarry Smith ierr = DMSetType(*packer,DMCOMPOSITE);CHKERRQ(ierr); 173647c6ae99SBarry Smith PetscFunctionReturn(0); 173747c6ae99SBarry Smith } 1738