147c6ae99SBarry Smith 2ccd284c7SBarry Smith #include <../src/dm/impls/composite/packimpl.h> /*I "petscdmcomposite.h" I*/ 347c6ae99SBarry Smith 447c6ae99SBarry Smith #undef __FUNCT__ 547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeSetCoupling" 647c6ae99SBarry Smith /*@C 747c6ae99SBarry Smith DMCompositeSetCoupling - Sets user provided routines that compute the coupling between the 89ae5db72SJed Brown seperate components (DMs) in a DMto build the correct matrix nonzero structure. 947c6ae99SBarry Smith 1047c6ae99SBarry Smith 1147c6ae99SBarry Smith Logically Collective on MPI_Comm 1247c6ae99SBarry Smith 1347c6ae99SBarry Smith Input Parameter: 1447c6ae99SBarry Smith + dm - the composite object 1547c6ae99SBarry Smith - formcouplelocations - routine to set the nonzero locations in the matrix 1647c6ae99SBarry Smith 1747c6ae99SBarry Smith Level: advanced 1847c6ae99SBarry Smith 191b2093e4SBarry Smith Notes: See DMSetApplicationContext() and DMGetApplicationContext() for how to get user information into 2047c6ae99SBarry Smith this routine 2147c6ae99SBarry Smith 2247c6ae99SBarry Smith @*/ 237087cfbeSBarry Smith PetscErrorCode DMCompositeSetCoupling(DM dm,PetscErrorCode (*FormCoupleLocations)(DM,Mat,PetscInt*,PetscInt*,PetscInt,PetscInt,PetscInt,PetscInt)) 2447c6ae99SBarry Smith { 2547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 2647c6ae99SBarry Smith 2747c6ae99SBarry Smith PetscFunctionBegin; 2847c6ae99SBarry Smith com->FormCoupleLocations = FormCoupleLocations; 2947c6ae99SBarry Smith PetscFunctionReturn(0); 3047c6ae99SBarry Smith } 3147c6ae99SBarry Smith 3247c6ae99SBarry Smith #undef __FUNCT__ 330c010503SBarry Smith #define __FUNCT__ "DMDestroy_Composite" 346bf464f9SBarry Smith PetscErrorCode DMDestroy_Composite(DM dm) 3547c6ae99SBarry Smith { 3647c6ae99SBarry Smith PetscErrorCode ierr; 3747c6ae99SBarry Smith struct DMCompositeLink *next, *prev; 3847c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 3947c6ae99SBarry Smith 4047c6ae99SBarry Smith PetscFunctionBegin; 4147c6ae99SBarry Smith next = com->next; 4247c6ae99SBarry Smith while (next) { 4347c6ae99SBarry Smith prev = next; 4447c6ae99SBarry Smith next = next->next; 45fcfd50ebSBarry Smith ierr = DMDestroy(&prev->dm);CHKERRQ(ierr); 4647c6ae99SBarry Smith ierr = PetscFree(prev->grstarts);CHKERRQ(ierr); 4747c6ae99SBarry Smith ierr = PetscFree(prev);CHKERRQ(ierr); 4847c6ae99SBarry Smith } 49435a35e8SMatthew G Knepley /* This was originally freed in DMDestroy(), but that prevents reference counting of backend objects */ 50435a35e8SMatthew G Knepley ierr = PetscFree(com);CHKERRQ(ierr); 5147c6ae99SBarry Smith PetscFunctionReturn(0); 5247c6ae99SBarry Smith } 5347c6ae99SBarry Smith 5447c6ae99SBarry Smith #undef __FUNCT__ 550c010503SBarry Smith #define __FUNCT__ "DMView_Composite" 567087cfbeSBarry Smith PetscErrorCode DMView_Composite(DM dm,PetscViewer v) 5747c6ae99SBarry Smith { 5847c6ae99SBarry Smith PetscErrorCode ierr; 5947c6ae99SBarry Smith PetscBool iascii; 6047c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 6147c6ae99SBarry Smith 6247c6ae99SBarry Smith PetscFunctionBegin; 63251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)v,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 6447c6ae99SBarry Smith if (iascii) { 6547c6ae99SBarry Smith struct DMCompositeLink *lnk = com->next; 6647c6ae99SBarry Smith PetscInt i; 6747c6ae99SBarry Smith 6847c6ae99SBarry Smith ierr = PetscViewerASCIIPrintf(v,"DM (%s)\n",((PetscObject)dm)->prefix ? ((PetscObject)dm)->prefix : "no prefix");CHKERRQ(ierr); 699ae5db72SJed Brown ierr = PetscViewerASCIIPrintf(v," contains %D DMs\n",com->nDM);CHKERRQ(ierr); 7047c6ae99SBarry Smith ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr); 7147c6ae99SBarry Smith for (i=0; lnk; lnk=lnk->next,i++) { 729ae5db72SJed Brown ierr = PetscViewerASCIIPrintf(v,"Link %D: DM of type %s\n",i,((PetscObject)lnk->dm)->type_name);CHKERRQ(ierr); 7347c6ae99SBarry Smith ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr); 7447c6ae99SBarry Smith ierr = DMView(lnk->dm,v);CHKERRQ(ierr); 7547c6ae99SBarry Smith ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr); 7647c6ae99SBarry Smith } 7747c6ae99SBarry Smith ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr); 7847c6ae99SBarry Smith } 7947c6ae99SBarry Smith PetscFunctionReturn(0); 8047c6ae99SBarry Smith } 8147c6ae99SBarry Smith 8247c6ae99SBarry Smith /* --------------------------------------------------------------------------------------*/ 8347c6ae99SBarry Smith #undef __FUNCT__ 84d7bf68aeSBarry Smith #define __FUNCT__ "DMSetUp_Composite" 857087cfbeSBarry Smith PetscErrorCode DMSetUp_Composite(DM dm) 8647c6ae99SBarry Smith { 8747c6ae99SBarry Smith PetscErrorCode ierr; 8847c6ae99SBarry Smith PetscInt nprev = 0; 8947c6ae99SBarry Smith PetscMPIInt rank,size; 9047c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 9147c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 9247c6ae99SBarry Smith PetscLayout map; 9347c6ae99SBarry Smith 9447c6ae99SBarry Smith PetscFunctionBegin; 95ce94432eSBarry Smith if (com->setup) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_ARG_WRONGSTATE,"Packer has already been setup"); 96ce94432eSBarry Smith ierr = PetscLayoutCreate(PetscObjectComm((PetscObject)dm),&map);CHKERRQ(ierr); 9747c6ae99SBarry Smith ierr = PetscLayoutSetLocalSize(map,com->n);CHKERRQ(ierr); 9847c6ae99SBarry Smith ierr = PetscLayoutSetSize(map,PETSC_DETERMINE);CHKERRQ(ierr); 9947c6ae99SBarry Smith ierr = PetscLayoutSetBlockSize(map,1);CHKERRQ(ierr); 10047c6ae99SBarry Smith ierr = PetscLayoutSetUp(map);CHKERRQ(ierr); 10147c6ae99SBarry Smith ierr = PetscLayoutGetSize(map,&com->N);CHKERRQ(ierr); 1020298fd71SBarry Smith ierr = PetscLayoutGetRange(map,&com->rstart,NULL);CHKERRQ(ierr); 103fcfd50ebSBarry Smith ierr = PetscLayoutDestroy(&map);CHKERRQ(ierr); 10447c6ae99SBarry Smith 1059ae5db72SJed Brown /* now set the rstart for each linked vector */ 106ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 107ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)dm),&size);CHKERRQ(ierr); 10847c6ae99SBarry Smith while (next) { 10947c6ae99SBarry Smith next->rstart = nprev; 11006ebdd98SJed Brown nprev += next->n; 11147c6ae99SBarry Smith next->grstart = com->rstart + next->rstart; 11247c6ae99SBarry Smith ierr = PetscMalloc(size*sizeof(PetscInt),&next->grstarts);CHKERRQ(ierr); 113ce94432eSBarry Smith ierr = MPI_Allgather(&next->grstart,1,MPIU_INT,next->grstarts,1,MPIU_INT,PetscObjectComm((PetscObject)dm));CHKERRQ(ierr); 11447c6ae99SBarry Smith next = next->next; 11547c6ae99SBarry Smith } 11647c6ae99SBarry Smith com->setup = PETSC_TRUE; 11747c6ae99SBarry Smith PetscFunctionReturn(0); 11847c6ae99SBarry Smith } 11947c6ae99SBarry Smith 12047c6ae99SBarry Smith /* ----------------------------------------------------------------------------------*/ 12147c6ae99SBarry Smith 12247c6ae99SBarry Smith #undef __FUNCT__ 12347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetNumberDM" 12473e31fe2SJed Brown /*@ 12547c6ae99SBarry Smith DMCompositeGetNumberDM - Get's the number of DM objects in the DMComposite 12647c6ae99SBarry Smith representation. 12747c6ae99SBarry Smith 12847c6ae99SBarry Smith Not Collective 12947c6ae99SBarry Smith 13047c6ae99SBarry Smith Input Parameter: 13147c6ae99SBarry Smith . dm - the packer object 13247c6ae99SBarry Smith 13347c6ae99SBarry Smith Output Parameter: 13447c6ae99SBarry Smith . nDM - the number of DMs 13547c6ae99SBarry Smith 13647c6ae99SBarry Smith Level: beginner 13747c6ae99SBarry Smith 13847c6ae99SBarry Smith @*/ 1397087cfbeSBarry Smith PetscErrorCode DMCompositeGetNumberDM(DM dm,PetscInt *nDM) 14047c6ae99SBarry Smith { 14147c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 1425fd66863SKarl Rupp 14347c6ae99SBarry Smith PetscFunctionBegin; 14447c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 14547c6ae99SBarry Smith *nDM = com->nDM; 14647c6ae99SBarry Smith PetscFunctionReturn(0); 14747c6ae99SBarry Smith } 14847c6ae99SBarry Smith 14947c6ae99SBarry Smith 15047c6ae99SBarry Smith #undef __FUNCT__ 15147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess" 15247c6ae99SBarry Smith /*@C 15347c6ae99SBarry Smith DMCompositeGetAccess - Allows one to access the individual packed vectors in their global 15447c6ae99SBarry Smith representation. 15547c6ae99SBarry Smith 15647c6ae99SBarry Smith Collective on DMComposite 15747c6ae99SBarry Smith 1589ae5db72SJed Brown Input Parameters: 15947c6ae99SBarry Smith + dm - the packer object 1609ae5db72SJed Brown - gvec - the global vector 1619ae5db72SJed Brown 1629ae5db72SJed Brown Output Parameters: 1630298fd71SBarry Smith . Vec* ... - the packed parallel vectors, NULL for those that are not needed 16447c6ae99SBarry Smith 16547c6ae99SBarry Smith Notes: Use DMCompositeRestoreAccess() to return the vectors when you no longer need them 16647c6ae99SBarry Smith 167f73e5cebSJed Brown Fortran Notes: 168f73e5cebSJed Brown 169f73e5cebSJed Brown Fortran callers must use numbered versions of this routine, e.g., DMCompositeGetAccess4(dm,gvec,vec1,vec2,vec3,vec4) 170f73e5cebSJed Brown or use the alternative interface DMCompositeGetAccessArray(). 171f73e5cebSJed Brown 17247c6ae99SBarry Smith Level: advanced 17347c6ae99SBarry Smith 174f73e5cebSJed Brown .seealso: DMCompositeGetEntries(), DMCompositeScatter() 17547c6ae99SBarry Smith @*/ 1767087cfbeSBarry Smith PetscErrorCode DMCompositeGetAccess(DM dm,Vec gvec,...) 17747c6ae99SBarry Smith { 17847c6ae99SBarry Smith va_list Argp; 17947c6ae99SBarry Smith PetscErrorCode ierr; 18047c6ae99SBarry Smith struct DMCompositeLink *next; 18147c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 18247c6ae99SBarry Smith 18347c6ae99SBarry Smith PetscFunctionBegin; 18447c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 18547c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 18647c6ae99SBarry Smith next = com->next; 18747c6ae99SBarry Smith if (!com->setup) { 188d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 18947c6ae99SBarry Smith } 19047c6ae99SBarry Smith 19147c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 19247c6ae99SBarry Smith va_start(Argp,gvec); 19347c6ae99SBarry Smith while (next) { 19447c6ae99SBarry Smith Vec *vec; 19547c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 1969ae5db72SJed Brown if (vec) { 1979ae5db72SJed Brown PetscScalar *array; 1989ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,vec);CHKERRQ(ierr); 1999ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 2009ae5db72SJed Brown ierr = VecPlaceArray(*vec,array+next->rstart);CHKERRQ(ierr); 2019ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 20247c6ae99SBarry Smith } 20347c6ae99SBarry Smith next = next->next; 20447c6ae99SBarry Smith } 20547c6ae99SBarry Smith va_end(Argp); 20647c6ae99SBarry Smith PetscFunctionReturn(0); 20747c6ae99SBarry Smith } 20847c6ae99SBarry Smith 20947c6ae99SBarry Smith #undef __FUNCT__ 210f73e5cebSJed Brown #define __FUNCT__ "DMCompositeGetAccessArray" 211f73e5cebSJed Brown /*@C 212f73e5cebSJed Brown DMCompositeGetAccessArray - Allows one to access the individual packed vectors in their global 213f73e5cebSJed Brown representation. 214f73e5cebSJed Brown 215f73e5cebSJed Brown Collective on DMComposite 216f73e5cebSJed Brown 217f73e5cebSJed Brown Input Parameters: 218f73e5cebSJed Brown + dm - the packer object 219f73e5cebSJed Brown . pvec - packed vector 220f73e5cebSJed Brown . nwanted - number of vectors wanted 2210298fd71SBarry Smith - wanted - sorted array of vectors wanted, or NULL to get all vectors 222f73e5cebSJed Brown 223f73e5cebSJed Brown Output Parameters: 224f73e5cebSJed Brown . vecs - array of requested global vectors (must be allocated) 225f73e5cebSJed Brown 226f73e5cebSJed Brown Notes: Use DMCompositeRestoreAccessArray() to return the vectors when you no longer need them 227f73e5cebSJed Brown 228f73e5cebSJed Brown Level: advanced 229f73e5cebSJed Brown 230f73e5cebSJed Brown .seealso: DMCompositeGetAccess(), DMCompositeGetEntries(), DMCompositeScatter(), DMCompositeGather() 231f73e5cebSJed Brown @*/ 232f73e5cebSJed Brown PetscErrorCode DMCompositeGetAccessArray(DM dm,Vec pvec,PetscInt nwanted,const PetscInt *wanted,Vec *vecs) 233f73e5cebSJed Brown { 234f73e5cebSJed Brown PetscErrorCode ierr; 235f73e5cebSJed Brown struct DMCompositeLink *link; 236f73e5cebSJed Brown PetscInt i,wnum; 237f73e5cebSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 238f73e5cebSJed Brown 239f73e5cebSJed Brown PetscFunctionBegin; 240f73e5cebSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 241f73e5cebSJed Brown PetscValidHeaderSpecific(pvec,VEC_CLASSID,2); 242f73e5cebSJed Brown if (!com->setup) { 243f73e5cebSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 244f73e5cebSJed Brown } 245f73e5cebSJed Brown 246f73e5cebSJed Brown for (i=0,wnum=0,link=com->next; link && wnum<nwanted; i++,link=link->next) { 247f73e5cebSJed Brown if (!wanted || i == wanted[wnum]) { 248f73e5cebSJed Brown PetscScalar *array; 249f73e5cebSJed Brown Vec v; 250f73e5cebSJed Brown ierr = DMGetGlobalVector(link->dm,&v);CHKERRQ(ierr); 251f73e5cebSJed Brown ierr = VecGetArray(pvec,&array);CHKERRQ(ierr); 252f73e5cebSJed Brown ierr = VecPlaceArray(v,array+link->rstart);CHKERRQ(ierr); 253f73e5cebSJed Brown ierr = VecRestoreArray(pvec,&array);CHKERRQ(ierr); 254f73e5cebSJed Brown vecs[wnum++] = v; 255f73e5cebSJed Brown } 256f73e5cebSJed Brown } 257f73e5cebSJed Brown PetscFunctionReturn(0); 258f73e5cebSJed Brown } 259f73e5cebSJed Brown 260f73e5cebSJed Brown #undef __FUNCT__ 26147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess" 26247c6ae99SBarry Smith /*@C 263aa219208SBarry Smith DMCompositeRestoreAccess - Returns the vectors obtained with DMCompositeGetAccess() 26447c6ae99SBarry Smith representation. 26547c6ae99SBarry Smith 26647c6ae99SBarry Smith Collective on DMComposite 26747c6ae99SBarry Smith 2689ae5db72SJed Brown Input Parameters: 26947c6ae99SBarry Smith + dm - the packer object 27047c6ae99SBarry Smith . gvec - the global vector 2710298fd71SBarry Smith - Vec* ... - the individual parallel vectors, NULL for those that are not needed 27247c6ae99SBarry Smith 27347c6ae99SBarry Smith Level: advanced 27447c6ae99SBarry Smith 2759ae5db72SJed Brown .seealso DMCompositeAddDM(), DMCreateGlobalVector(), 2766eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeScatter(), 277aa219208SBarry Smith DMCompositeRestoreAccess(), DMCompositeGetAccess() 27847c6ae99SBarry Smith 27947c6ae99SBarry Smith @*/ 2807087cfbeSBarry Smith PetscErrorCode DMCompositeRestoreAccess(DM dm,Vec gvec,...) 28147c6ae99SBarry Smith { 28247c6ae99SBarry Smith va_list Argp; 28347c6ae99SBarry Smith PetscErrorCode ierr; 28447c6ae99SBarry Smith struct DMCompositeLink *next; 28547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 28647c6ae99SBarry Smith 28747c6ae99SBarry Smith PetscFunctionBegin; 28847c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 28947c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 29047c6ae99SBarry Smith next = com->next; 29147c6ae99SBarry Smith if (!com->setup) { 292d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 29347c6ae99SBarry Smith } 29447c6ae99SBarry Smith 29547c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 29647c6ae99SBarry Smith va_start(Argp,gvec); 29747c6ae99SBarry Smith while (next) { 29847c6ae99SBarry Smith Vec *vec; 29947c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 3009ae5db72SJed Brown if (vec) { 3019ae5db72SJed Brown ierr = VecResetArray(*vec);CHKERRQ(ierr); 3029ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,vec);CHKERRQ(ierr); 30347c6ae99SBarry Smith } 30447c6ae99SBarry Smith next = next->next; 30547c6ae99SBarry Smith } 30647c6ae99SBarry Smith va_end(Argp); 30747c6ae99SBarry Smith PetscFunctionReturn(0); 30847c6ae99SBarry Smith } 30947c6ae99SBarry Smith 31047c6ae99SBarry Smith #undef __FUNCT__ 311f73e5cebSJed Brown #define __FUNCT__ "DMCompositeRestoreAccessArray" 312f73e5cebSJed Brown /*@C 313f73e5cebSJed Brown DMCompositeRestoreAccessArray - Returns the vectors obtained with DMCompositeGetAccessArray() 314f73e5cebSJed Brown 315f73e5cebSJed Brown Collective on DMComposite 316f73e5cebSJed Brown 317f73e5cebSJed Brown Input Parameters: 318f73e5cebSJed Brown + dm - the packer object 319f73e5cebSJed Brown . pvec - packed vector 320f73e5cebSJed Brown . nwanted - number of vectors wanted 3210298fd71SBarry Smith . wanted - sorted array of vectors wanted, or NULL to get all vectors 322f73e5cebSJed Brown - vecs - array of global vectors to return 323f73e5cebSJed Brown 324f73e5cebSJed Brown Level: advanced 325f73e5cebSJed Brown 326f73e5cebSJed Brown .seealso: DMCompositeRestoreAccess(), DMCompositeRestoreEntries(), DMCompositeScatter(), DMCompositeGather() 327f73e5cebSJed Brown @*/ 328f73e5cebSJed Brown PetscErrorCode DMCompositeRestoreAccessArray(DM dm,Vec pvec,PetscInt nwanted,const PetscInt *wanted,Vec *vecs) 329f73e5cebSJed Brown { 330f73e5cebSJed Brown PetscErrorCode ierr; 331f73e5cebSJed Brown struct DMCompositeLink *link; 332f73e5cebSJed Brown PetscInt i,wnum; 333f73e5cebSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 334f73e5cebSJed Brown 335f73e5cebSJed Brown PetscFunctionBegin; 336f73e5cebSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 337f73e5cebSJed Brown PetscValidHeaderSpecific(pvec,VEC_CLASSID,2); 338f73e5cebSJed Brown if (!com->setup) { 339f73e5cebSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 340f73e5cebSJed Brown } 341f73e5cebSJed Brown 342f73e5cebSJed Brown for (i=0,wnum=0,link=com->next; link && wnum<nwanted; i++,link=link->next) { 343f73e5cebSJed Brown if (!wanted || i == wanted[wnum]) { 344f73e5cebSJed Brown ierr = VecResetArray(vecs[wnum]);CHKERRQ(ierr); 345f73e5cebSJed Brown ierr = DMRestoreGlobalVector(link->dm,&vecs[wnum]);CHKERRQ(ierr); 346f73e5cebSJed Brown wnum++; 347f73e5cebSJed Brown } 348f73e5cebSJed Brown } 349f73e5cebSJed Brown PetscFunctionReturn(0); 350f73e5cebSJed Brown } 351f73e5cebSJed Brown 352f73e5cebSJed Brown #undef __FUNCT__ 35347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter" 35447c6ae99SBarry Smith /*@C 35547c6ae99SBarry Smith DMCompositeScatter - Scatters from a global packed vector into its individual local vectors 35647c6ae99SBarry Smith 35747c6ae99SBarry Smith Collective on DMComposite 35847c6ae99SBarry Smith 3599ae5db72SJed Brown Input Parameters: 36047c6ae99SBarry Smith + dm - the packer object 36147c6ae99SBarry Smith . gvec - the global vector 3620298fd71SBarry Smith - Vec ... - the individual sequential vectors, NULL for those that are not needed 36347c6ae99SBarry Smith 36447c6ae99SBarry Smith Level: advanced 36547c6ae99SBarry Smith 366*6f3c3dcfSJed Brown Notes: 367*6f3c3dcfSJed Brown DMCompositeScatterArray() is a non-variadic alternative that is often more convenient for library callers and is 368*6f3c3dcfSJed Brown accessible from Fortran. 369*6f3c3dcfSJed Brown 3709ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 3716eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 37247c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 373*6f3c3dcfSJed Brown DMCompositeScatterArray() 37447c6ae99SBarry Smith 37547c6ae99SBarry Smith @*/ 3767087cfbeSBarry Smith PetscErrorCode DMCompositeScatter(DM dm,Vec gvec,...) 37747c6ae99SBarry Smith { 37847c6ae99SBarry Smith va_list Argp; 37947c6ae99SBarry Smith PetscErrorCode ierr; 38047c6ae99SBarry Smith struct DMCompositeLink *next; 3818fd8f222SJed Brown PetscInt cnt; 38247c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 38347c6ae99SBarry Smith 38447c6ae99SBarry Smith PetscFunctionBegin; 38547c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 38647c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 38747c6ae99SBarry Smith if (!com->setup) { 388d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 38947c6ae99SBarry Smith } 39047c6ae99SBarry Smith 39147c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 39247c6ae99SBarry Smith va_start(Argp,gvec); 3938fd8f222SJed Brown for (cnt=3,next=com->next; next; cnt++,next=next->next) { 3949ae5db72SJed Brown Vec local; 3959ae5db72SJed Brown local = va_arg(Argp, Vec); 3969ae5db72SJed Brown if (local) { 3979ae5db72SJed Brown Vec global; 39847c6ae99SBarry Smith PetscScalar *array; 3999ae5db72SJed Brown PetscValidHeaderSpecific(local,VEC_CLASSID,cnt); 4009ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 4019ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 4029ae5db72SJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 4039ae5db72SJed Brown ierr = DMGlobalToLocalBegin(next->dm,global,INSERT_VALUES,local);CHKERRQ(ierr); 4049ae5db72SJed Brown ierr = DMGlobalToLocalEnd(next->dm,global,INSERT_VALUES,local);CHKERRQ(ierr); 4059ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 4069ae5db72SJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 4079ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 40847c6ae99SBarry Smith } 40947c6ae99SBarry Smith } 41047c6ae99SBarry Smith va_end(Argp); 41147c6ae99SBarry Smith PetscFunctionReturn(0); 41247c6ae99SBarry Smith } 41347c6ae99SBarry Smith 41447c6ae99SBarry Smith #undef __FUNCT__ 415*6f3c3dcfSJed Brown #define __FUNCT__ "DMCompositeScatterArray" 416*6f3c3dcfSJed Brown /*@ 417*6f3c3dcfSJed Brown DMCompositeScatterArray - Scatters from a global packed vector into its individual local vectors 418*6f3c3dcfSJed Brown 419*6f3c3dcfSJed Brown Collective on DMComposite 420*6f3c3dcfSJed Brown 421*6f3c3dcfSJed Brown Input Parameters: 422*6f3c3dcfSJed Brown + dm - the packer object 423*6f3c3dcfSJed Brown . gvec - the global vector 424*6f3c3dcfSJed Brown . lvecs - array of local vectors, NULL for any that are not needed 425*6f3c3dcfSJed Brown 426*6f3c3dcfSJed Brown Level: advanced 427*6f3c3dcfSJed Brown 428*6f3c3dcfSJed Brown Note: 429*6f3c3dcfSJed Brown This is a non-variadic alternative to DMCompositeScatterArray() 430*6f3c3dcfSJed Brown 431*6f3c3dcfSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector() 432*6f3c3dcfSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 433*6f3c3dcfSJed Brown DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 434*6f3c3dcfSJed Brown 435*6f3c3dcfSJed Brown @*/ 436*6f3c3dcfSJed Brown PetscErrorCode DMCompositeScatterArray(DM dm,Vec gvec,Vec *lvecs) 437*6f3c3dcfSJed Brown { 438*6f3c3dcfSJed Brown PetscErrorCode ierr; 439*6f3c3dcfSJed Brown struct DMCompositeLink *next; 440*6f3c3dcfSJed Brown PetscInt i; 441*6f3c3dcfSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 442*6f3c3dcfSJed Brown 443*6f3c3dcfSJed Brown PetscFunctionBegin; 444*6f3c3dcfSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 445*6f3c3dcfSJed Brown PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 446*6f3c3dcfSJed Brown if (!com->setup) { 447*6f3c3dcfSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 448*6f3c3dcfSJed Brown } 449*6f3c3dcfSJed Brown 450*6f3c3dcfSJed Brown /* loop over packed objects, handling one at at time */ 451*6f3c3dcfSJed Brown for (i=0,next=com->next; next; next=next->next,i++) { 452*6f3c3dcfSJed Brown if (lvecs[i]) { 453*6f3c3dcfSJed Brown Vec global; 454*6f3c3dcfSJed Brown PetscScalar *array; 455*6f3c3dcfSJed Brown PetscValidHeaderSpecific(lvecs[i],VEC_CLASSID,3); 456*6f3c3dcfSJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 457*6f3c3dcfSJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 458*6f3c3dcfSJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 459*6f3c3dcfSJed Brown ierr = DMGlobalToLocalBegin(next->dm,global,INSERT_VALUES,lvecs[i]);CHKERRQ(ierr); 460*6f3c3dcfSJed Brown ierr = DMGlobalToLocalEnd(next->dm,global,INSERT_VALUES,lvecs[i]);CHKERRQ(ierr); 461*6f3c3dcfSJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 462*6f3c3dcfSJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 463*6f3c3dcfSJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 464*6f3c3dcfSJed Brown } 465*6f3c3dcfSJed Brown } 466*6f3c3dcfSJed Brown PetscFunctionReturn(0); 467*6f3c3dcfSJed Brown } 468*6f3c3dcfSJed Brown 469*6f3c3dcfSJed Brown #undef __FUNCT__ 47047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather" 47147c6ae99SBarry Smith /*@C 47247c6ae99SBarry Smith DMCompositeGather - Gathers into a global packed vector from its individual local vectors 47347c6ae99SBarry Smith 47447c6ae99SBarry Smith Collective on DMComposite 47547c6ae99SBarry Smith 47647c6ae99SBarry Smith Input Parameter: 47747c6ae99SBarry Smith + dm - the packer object 47847c6ae99SBarry Smith . gvec - the global vector 4790298fd71SBarry Smith - Vec ... - the individual sequential vectors, NULL for any that are not needed 48047c6ae99SBarry Smith 48147c6ae99SBarry Smith Level: advanced 48247c6ae99SBarry Smith 4839ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 4846eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 48547c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 48647c6ae99SBarry Smith 48747c6ae99SBarry Smith @*/ 4887087cfbeSBarry Smith PetscErrorCode DMCompositeGather(DM dm,Vec gvec,InsertMode imode,...) 48947c6ae99SBarry Smith { 49047c6ae99SBarry Smith va_list Argp; 49147c6ae99SBarry Smith PetscErrorCode ierr; 49247c6ae99SBarry Smith struct DMCompositeLink *next; 49347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 4948fd8f222SJed Brown PetscInt cnt; 49547c6ae99SBarry Smith 49647c6ae99SBarry Smith PetscFunctionBegin; 49747c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 49847c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 49947c6ae99SBarry Smith if (!com->setup) { 500d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 50147c6ae99SBarry Smith } 50247c6ae99SBarry Smith 50347c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 504df0c820aSJed Brown va_start(Argp,imode); 5058fd8f222SJed Brown for (cnt=3,next=com->next; next; cnt++,next=next->next) { 5069ae5db72SJed Brown Vec local; 5079ae5db72SJed Brown local = va_arg(Argp, Vec); 5089ae5db72SJed Brown if (local) { 50947c6ae99SBarry Smith PetscScalar *array; 5109ae5db72SJed Brown Vec global; 5119ae5db72SJed Brown PetscValidHeaderSpecific(local,VEC_CLASSID,cnt); 5129ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 5139ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 5149ae5db72SJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 5159ae5db72SJed Brown ierr = DMLocalToGlobalBegin(next->dm,local,imode,global);CHKERRQ(ierr); 5169ae5db72SJed Brown ierr = DMLocalToGlobalEnd(next->dm,local,imode,global);CHKERRQ(ierr); 5179ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 5189ae5db72SJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 5199ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 52047c6ae99SBarry Smith } 52147c6ae99SBarry Smith } 52247c6ae99SBarry Smith va_end(Argp); 52347c6ae99SBarry Smith PetscFunctionReturn(0); 52447c6ae99SBarry Smith } 52547c6ae99SBarry Smith 52647c6ae99SBarry Smith #undef __FUNCT__ 527*6f3c3dcfSJed Brown #define __FUNCT__ "DMCompositeGatherArray" 528*6f3c3dcfSJed Brown /*@ 529*6f3c3dcfSJed Brown DMCompositeGatherArray - Gathers into a global packed vector from its individual local vectors 530*6f3c3dcfSJed Brown 531*6f3c3dcfSJed Brown Collective on DMComposite 532*6f3c3dcfSJed Brown 533*6f3c3dcfSJed Brown Input Parameter: 534*6f3c3dcfSJed Brown + dm - the packer object 535*6f3c3dcfSJed Brown . gvec - the global vector 536*6f3c3dcfSJed Brown - lvecs - the individual sequential vectors, NULL for any that are not needed 537*6f3c3dcfSJed Brown 538*6f3c3dcfSJed Brown Level: advanced 539*6f3c3dcfSJed Brown 540*6f3c3dcfSJed Brown Notes: 541*6f3c3dcfSJed Brown This is a non-variadic alternative to DMCompositeGather(). 542*6f3c3dcfSJed Brown 543*6f3c3dcfSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 544*6f3c3dcfSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 545*6f3c3dcfSJed Brown DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries(), 546*6f3c3dcfSJed Brown @*/ 547*6f3c3dcfSJed Brown PetscErrorCode DMCompositeGatherArray(DM dm,Vec gvec,InsertMode imode,Vec *lvecs) 548*6f3c3dcfSJed Brown { 549*6f3c3dcfSJed Brown PetscErrorCode ierr; 550*6f3c3dcfSJed Brown struct DMCompositeLink *next; 551*6f3c3dcfSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 552*6f3c3dcfSJed Brown PetscInt i; 553*6f3c3dcfSJed Brown 554*6f3c3dcfSJed Brown PetscFunctionBegin; 555*6f3c3dcfSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 556*6f3c3dcfSJed Brown PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 557*6f3c3dcfSJed Brown if (!com->setup) { 558*6f3c3dcfSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 559*6f3c3dcfSJed Brown } 560*6f3c3dcfSJed Brown 561*6f3c3dcfSJed Brown /* loop over packed objects, handling one at at time */ 562*6f3c3dcfSJed Brown for (next=com->next,i=0; next; next=next->next,i++) { 563*6f3c3dcfSJed Brown if (lvecs[i]) { 564*6f3c3dcfSJed Brown PetscScalar *array; 565*6f3c3dcfSJed Brown Vec global; 566*6f3c3dcfSJed Brown PetscValidHeaderSpecific(lvecs[i],VEC_CLASSID,3); 567*6f3c3dcfSJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 568*6f3c3dcfSJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 569*6f3c3dcfSJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 570*6f3c3dcfSJed Brown ierr = DMLocalToGlobalBegin(next->dm,lvecs[i],imode,global);CHKERRQ(ierr); 571*6f3c3dcfSJed Brown ierr = DMLocalToGlobalEnd(next->dm,lvecs[i],imode,global);CHKERRQ(ierr); 572*6f3c3dcfSJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 573*6f3c3dcfSJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 574*6f3c3dcfSJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 575*6f3c3dcfSJed Brown } 576*6f3c3dcfSJed Brown } 577*6f3c3dcfSJed Brown PetscFunctionReturn(0); 578*6f3c3dcfSJed Brown } 579*6f3c3dcfSJed Brown 580*6f3c3dcfSJed Brown #undef __FUNCT__ 58147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeAddDM" 58247c6ae99SBarry Smith /*@C 583aa219208SBarry Smith DMCompositeAddDM - adds a DM vector to a DMComposite 58447c6ae99SBarry Smith 58547c6ae99SBarry Smith Collective on DMComposite 58647c6ae99SBarry Smith 58747c6ae99SBarry Smith Input Parameter: 58847c6ae99SBarry Smith + dm - the packer object 58947c6ae99SBarry Smith - dm - the DM object, if the DM is a da you will need to caste it with a (DM) 59047c6ae99SBarry Smith 59147c6ae99SBarry Smith Level: advanced 59247c6ae99SBarry Smith 5930c010503SBarry Smith .seealso DMDestroy(), DMCompositeGather(), DMCompositeAddDM(), DMCreateGlobalVector(), 5946eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 59547c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 59647c6ae99SBarry Smith 59747c6ae99SBarry Smith @*/ 5987087cfbeSBarry Smith PetscErrorCode DMCompositeAddDM(DM dmc,DM dm) 59947c6ae99SBarry Smith { 60047c6ae99SBarry Smith PetscErrorCode ierr; 60106ebdd98SJed Brown PetscInt n,nlocal; 60247c6ae99SBarry Smith struct DMCompositeLink *mine,*next; 60306ebdd98SJed Brown Vec global,local; 60447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dmc->data; 60547c6ae99SBarry Smith 60647c6ae99SBarry Smith PetscFunctionBegin; 60747c6ae99SBarry Smith PetscValidHeaderSpecific(dmc,DM_CLASSID,1); 60847c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,2); 60947c6ae99SBarry Smith next = com->next; 610ce94432eSBarry Smith if (com->setup) SETERRQ(PetscObjectComm((PetscObject)dmc),PETSC_ERR_ARG_WRONGSTATE,"Cannot add a DM once you have used the DMComposite"); 61147c6ae99SBarry Smith 61247c6ae99SBarry Smith /* create new link */ 61347c6ae99SBarry Smith ierr = PetscNew(struct DMCompositeLink,&mine);CHKERRQ(ierr); 61447c6ae99SBarry Smith ierr = PetscObjectReference((PetscObject)dm);CHKERRQ(ierr); 61547c6ae99SBarry Smith ierr = DMGetGlobalVector(dm,&global);CHKERRQ(ierr); 61647c6ae99SBarry Smith ierr = VecGetLocalSize(global,&n);CHKERRQ(ierr); 61747c6ae99SBarry Smith ierr = DMRestoreGlobalVector(dm,&global);CHKERRQ(ierr); 61806ebdd98SJed Brown ierr = DMGetLocalVector(dm,&local);CHKERRQ(ierr); 61906ebdd98SJed Brown ierr = VecGetSize(local,&nlocal);CHKERRQ(ierr); 62006ebdd98SJed Brown ierr = DMRestoreLocalVector(dm,&local);CHKERRQ(ierr); 6218865f1eaSKarl Rupp 62247c6ae99SBarry Smith mine->n = n; 62306ebdd98SJed Brown mine->nlocal = nlocal; 62447c6ae99SBarry Smith mine->dm = dm; 6250298fd71SBarry Smith mine->next = NULL; 62647c6ae99SBarry Smith com->n += n; 62747c6ae99SBarry Smith 62847c6ae99SBarry Smith /* add to end of list */ 6298865f1eaSKarl Rupp if (!next) com->next = mine; 6308865f1eaSKarl Rupp else { 63147c6ae99SBarry Smith while (next->next) next = next->next; 63247c6ae99SBarry Smith next->next = mine; 63347c6ae99SBarry Smith } 63447c6ae99SBarry Smith com->nDM++; 63547c6ae99SBarry Smith com->nmine++; 63647c6ae99SBarry Smith PetscFunctionReturn(0); 63747c6ae99SBarry Smith } 63847c6ae99SBarry Smith 6399804daf3SBarry Smith #include <petscdraw.h> 6407087cfbeSBarry Smith extern PetscErrorCode VecView_MPI(Vec,PetscViewer); 64147c6ae99SBarry Smith EXTERN_C_BEGIN 64247c6ae99SBarry Smith #undef __FUNCT__ 64347c6ae99SBarry Smith #define __FUNCT__ "VecView_DMComposite" 6447087cfbeSBarry Smith PetscErrorCode VecView_DMComposite(Vec gvec,PetscViewer viewer) 64547c6ae99SBarry Smith { 64647c6ae99SBarry Smith DM dm; 64747c6ae99SBarry Smith PetscErrorCode ierr; 64847c6ae99SBarry Smith struct DMCompositeLink *next; 64947c6ae99SBarry Smith PetscBool isdraw; 650cef07954SSatish Balay DM_Composite *com; 65147c6ae99SBarry Smith 65247c6ae99SBarry Smith PetscFunctionBegin; 653c688c046SMatthew G Knepley ierr = VecGetDM(gvec, &dm);CHKERRQ(ierr); 654ce94432eSBarry Smith if (!dm) SETERRQ(PetscObjectComm((PetscObject)gvec),PETSC_ERR_ARG_WRONG,"Vector not generated from a DMComposite"); 65547c6ae99SBarry Smith com = (DM_Composite*)dm->data; 65647c6ae99SBarry Smith next = com->next; 65747c6ae99SBarry Smith 658251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr); 65947c6ae99SBarry Smith if (!isdraw) { 66047c6ae99SBarry Smith /* do I really want to call this? */ 66147c6ae99SBarry Smith ierr = VecView_MPI(gvec,viewer);CHKERRQ(ierr); 66247c6ae99SBarry Smith } else { 66347c6ae99SBarry Smith PetscInt cnt = 0; 66447c6ae99SBarry Smith 66547c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 66647c6ae99SBarry Smith while (next) { 66747c6ae99SBarry Smith Vec vec; 6689ae5db72SJed Brown PetscScalar *array; 66947c6ae99SBarry Smith PetscInt bs; 67047c6ae99SBarry Smith 6719ae5db72SJed Brown /* Should use VecGetSubVector() eventually, but would need to forward the DM for that to work */ 6729ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,&vec);CHKERRQ(ierr); 6739ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 6749ae5db72SJed Brown ierr = VecPlaceArray(vec,array+next->rstart);CHKERRQ(ierr); 6759ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 67647c6ae99SBarry Smith ierr = VecView(vec,viewer);CHKERRQ(ierr); 67747c6ae99SBarry Smith ierr = VecGetBlockSize(vec,&bs);CHKERRQ(ierr); 6789ae5db72SJed Brown ierr = VecResetArray(vec);CHKERRQ(ierr); 6799ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,&vec);CHKERRQ(ierr); 68047c6ae99SBarry Smith ierr = PetscViewerDrawBaseAdd(viewer,bs);CHKERRQ(ierr); 68147c6ae99SBarry Smith cnt += bs; 68247c6ae99SBarry Smith next = next->next; 68347c6ae99SBarry Smith } 68447c6ae99SBarry Smith ierr = PetscViewerDrawBaseAdd(viewer,-cnt);CHKERRQ(ierr); 68547c6ae99SBarry Smith } 68647c6ae99SBarry Smith PetscFunctionReturn(0); 68747c6ae99SBarry Smith } 68847c6ae99SBarry Smith EXTERN_C_END 68947c6ae99SBarry Smith 69047c6ae99SBarry Smith 69147c6ae99SBarry Smith #undef __FUNCT__ 6920c010503SBarry Smith #define __FUNCT__ "DMCreateGlobalVector_Composite" 6937087cfbeSBarry Smith PetscErrorCode DMCreateGlobalVector_Composite(DM dm,Vec *gvec) 69447c6ae99SBarry Smith { 69547c6ae99SBarry Smith PetscErrorCode ierr; 69647c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 69747c6ae99SBarry Smith 69847c6ae99SBarry Smith PetscFunctionBegin; 69947c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 700d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 701ce94432eSBarry Smith ierr = VecCreateMPI(PetscObjectComm((PetscObject)dm),com->n,com->N,gvec);CHKERRQ(ierr); 702c688c046SMatthew G Knepley ierr = VecSetDM(*gvec, dm);CHKERRQ(ierr); 70347c6ae99SBarry Smith ierr = VecSetOperation(*gvec,VECOP_VIEW,(void (*)(void))VecView_DMComposite);CHKERRQ(ierr); 70447c6ae99SBarry Smith PetscFunctionReturn(0); 70547c6ae99SBarry Smith } 70647c6ae99SBarry Smith 70747c6ae99SBarry Smith #undef __FUNCT__ 7080c010503SBarry Smith #define __FUNCT__ "DMCreateLocalVector_Composite" 7097087cfbeSBarry Smith PetscErrorCode DMCreateLocalVector_Composite(DM dm,Vec *lvec) 71047c6ae99SBarry Smith { 71147c6ae99SBarry Smith PetscErrorCode ierr; 71247c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 71347c6ae99SBarry Smith 71447c6ae99SBarry Smith PetscFunctionBegin; 71547c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 71647c6ae99SBarry Smith if (!com->setup) { 717d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 71847c6ae99SBarry Smith } 719ce94432eSBarry Smith ierr = VecCreateSeq(PetscObjectComm((PetscObject)dm),com->nghost,lvec);CHKERRQ(ierr); 720c688c046SMatthew G Knepley ierr = VecSetDM(*lvec, dm);CHKERRQ(ierr); 72147c6ae99SBarry Smith PetscFunctionReturn(0); 72247c6ae99SBarry Smith } 72347c6ae99SBarry Smith 72447c6ae99SBarry Smith #undef __FUNCT__ 7256eb61c8cSJed Brown #define __FUNCT__ "DMCompositeGetISLocalToGlobalMappings" 72647c6ae99SBarry Smith /*@C 7279ae5db72SJed Brown DMCompositeGetISLocalToGlobalMappings - gets an ISLocalToGlobalMapping for each DM in the DMComposite, maps to the composite global space 72847c6ae99SBarry Smith 72906ebdd98SJed Brown Collective on DM 73047c6ae99SBarry Smith 73147c6ae99SBarry Smith Input Parameter: 73247c6ae99SBarry Smith . dm - the packer object 73347c6ae99SBarry Smith 73447c6ae99SBarry Smith Output Parameters: 7359ae5db72SJed Brown . ltogs - the individual mappings for each packed vector. Note that this includes 7369ae5db72SJed Brown all the ghost points that individual ghosted DMDA's may have. 73747c6ae99SBarry Smith 73847c6ae99SBarry Smith Level: advanced 73947c6ae99SBarry Smith 74047c6ae99SBarry Smith Notes: 7416eb61c8cSJed Brown Each entry of ltogs should be destroyed with ISLocalToGlobalMappingDestroy(), the ltogs array should be freed with PetscFree(). 74247c6ae99SBarry Smith 7439ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 74447c6ae99SBarry Smith DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(), 74547c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries() 74647c6ae99SBarry Smith 74747c6ae99SBarry Smith @*/ 7487087cfbeSBarry Smith PetscErrorCode DMCompositeGetISLocalToGlobalMappings(DM dm,ISLocalToGlobalMapping **ltogs) 74947c6ae99SBarry Smith { 75047c6ae99SBarry Smith PetscErrorCode ierr; 75147c6ae99SBarry Smith PetscInt i,*idx,n,cnt; 75247c6ae99SBarry Smith struct DMCompositeLink *next; 75347c6ae99SBarry Smith PetscMPIInt rank; 75447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 75547c6ae99SBarry Smith 75647c6ae99SBarry Smith PetscFunctionBegin; 75747c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 758728e99d6SJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 7599ae5db72SJed Brown ierr = PetscMalloc((com->nDM)*sizeof(ISLocalToGlobalMapping),ltogs);CHKERRQ(ierr); 76047c6ae99SBarry Smith next = com->next; 761ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 76247c6ae99SBarry Smith 76347c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 76447c6ae99SBarry Smith cnt = 0; 76547c6ae99SBarry Smith while (next) { 7666eb61c8cSJed Brown ISLocalToGlobalMapping ltog; 7676eb61c8cSJed Brown PetscMPIInt size; 76886994e45SJed Brown const PetscInt *suboff,*indices; 7696eb61c8cSJed Brown Vec global; 77047c6ae99SBarry Smith 7716eb61c8cSJed Brown /* Get sub-DM global indices for each local dof */ 7721411c6eeSJed Brown ierr = DMGetLocalToGlobalMapping(next->dm,<og);CHKERRQ(ierr); 7736eb61c8cSJed Brown ierr = ISLocalToGlobalMappingGetSize(ltog,&n);CHKERRQ(ierr); 77486994e45SJed Brown ierr = ISLocalToGlobalMappingGetIndices(ltog,&indices);CHKERRQ(ierr); 77547c6ae99SBarry Smith ierr = PetscMalloc(n*sizeof(PetscInt),&idx);CHKERRQ(ierr); 77647c6ae99SBarry Smith 7776eb61c8cSJed Brown /* Get the offsets for the sub-DM global vector */ 7786eb61c8cSJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 7796eb61c8cSJed Brown ierr = VecGetOwnershipRanges(global,&suboff);CHKERRQ(ierr); 780ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)global),&size);CHKERRQ(ierr); 7816eb61c8cSJed Brown 7826eb61c8cSJed Brown /* Shift the sub-DM definition of the global space to the composite global space */ 7836eb61c8cSJed Brown for (i=0; i<n; i++) { 78486994e45SJed Brown PetscInt subi = indices[i],lo = 0,hi = size,t; 7856eb61c8cSJed Brown /* Binary search to find which rank owns subi */ 7866eb61c8cSJed Brown while (hi-lo > 1) { 7876eb61c8cSJed Brown t = lo + (hi-lo)/2; 7886eb61c8cSJed Brown if (suboff[t] > subi) hi = t; 7896eb61c8cSJed Brown else lo = t; 7906eb61c8cSJed Brown } 7916eb61c8cSJed Brown idx[i] = subi - suboff[lo] + next->grstarts[lo]; 7926eb61c8cSJed Brown } 79386994e45SJed Brown ierr = ISLocalToGlobalMappingRestoreIndices(ltog,&indices);CHKERRQ(ierr); 794ce94432eSBarry Smith ierr = ISLocalToGlobalMappingCreate(PetscObjectComm((PetscObject)dm),n,idx,PETSC_OWN_POINTER,&(*ltogs)[cnt]);CHKERRQ(ierr); 7956eb61c8cSJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 79647c6ae99SBarry Smith next = next->next; 79747c6ae99SBarry Smith cnt++; 79847c6ae99SBarry Smith } 79947c6ae99SBarry Smith PetscFunctionReturn(0); 80047c6ae99SBarry Smith } 80147c6ae99SBarry Smith 80247c6ae99SBarry Smith #undef __FUNCT__ 80387c85e80SJed Brown #define __FUNCT__ "DMCompositeGetLocalISs" 80487c85e80SJed Brown /*@C 8059ae5db72SJed Brown DMCompositeGetLocalISs - Gets index sets for each component of a composite local vector 80687c85e80SJed Brown 80787c85e80SJed Brown Not Collective 80887c85e80SJed Brown 80987c85e80SJed Brown Input Arguments: 81087c85e80SJed Brown . dm - composite DM 81187c85e80SJed Brown 81287c85e80SJed Brown Output Arguments: 81387c85e80SJed Brown . is - array of serial index sets for each each component of the DMComposite 81487c85e80SJed Brown 81587c85e80SJed Brown Level: intermediate 81687c85e80SJed Brown 81787c85e80SJed Brown Notes: 81887c85e80SJed Brown At present, a composite local vector does not normally exist. This function is used to provide index sets for 81987c85e80SJed Brown MatGetLocalSubMatrix(). In the future, the scatters for each entry in the DMComposite may be be merged into a single 8209ae5db72SJed Brown scatter to a composite local vector. The user should not typically need to know which is being done. 82187c85e80SJed Brown 82287c85e80SJed Brown To get the composite global indices at all local points (including ghosts), use DMCompositeGetISLocalToGlobalMappings(). 82387c85e80SJed Brown 82487c85e80SJed Brown To get index sets for pieces of the composite global vector, use DMCompositeGetGlobalISs(). 82587c85e80SJed Brown 82687c85e80SJed Brown Each returned IS should be destroyed with ISDestroy(), the array should be freed with PetscFree(). 82787c85e80SJed Brown 82887c85e80SJed Brown .seealso: DMCompositeGetGlobalISs(), DMCompositeGetISLocalToGlobalMappings(), MatGetLocalSubMatrix(), MatCreateLocalRef() 82987c85e80SJed Brown @*/ 8307087cfbeSBarry Smith PetscErrorCode DMCompositeGetLocalISs(DM dm,IS **is) 83187c85e80SJed Brown { 83287c85e80SJed Brown PetscErrorCode ierr; 83387c85e80SJed Brown DM_Composite *com = (DM_Composite*)dm->data; 83487c85e80SJed Brown struct DMCompositeLink *link; 83587c85e80SJed Brown PetscInt cnt,start; 83687c85e80SJed Brown 83787c85e80SJed Brown PetscFunctionBegin; 83887c85e80SJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 83987c85e80SJed Brown PetscValidPointer(is,2); 84087c85e80SJed Brown ierr = PetscMalloc(com->nmine*sizeof(IS),is);CHKERRQ(ierr); 84106ebdd98SJed Brown for (cnt=0,start=0,link=com->next; link; start+=link->nlocal,cnt++,link=link->next) { 842520db06cSJed Brown PetscInt bs; 8439ae5db72SJed Brown ierr = ISCreateStride(PETSC_COMM_SELF,link->nlocal,start,1,&(*is)[cnt]);CHKERRQ(ierr); 8441411c6eeSJed Brown ierr = DMGetBlockSize(link->dm,&bs);CHKERRQ(ierr); 845520db06cSJed Brown ierr = ISSetBlockSize((*is)[cnt],bs);CHKERRQ(ierr); 846520db06cSJed Brown } 84787c85e80SJed Brown PetscFunctionReturn(0); 84887c85e80SJed Brown } 84987c85e80SJed Brown 85087c85e80SJed Brown #undef __FUNCT__ 85147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetGlobalISs" 85247c6ae99SBarry Smith /*@C 85347c6ae99SBarry Smith DMCompositeGetGlobalISs - Gets the index sets for each composed object 85447c6ae99SBarry Smith 85547c6ae99SBarry Smith Collective on DMComposite 85647c6ae99SBarry Smith 85747c6ae99SBarry Smith Input Parameter: 85847c6ae99SBarry Smith . dm - the packer object 85947c6ae99SBarry Smith 86047c6ae99SBarry Smith Output Parameters: 86147c6ae99SBarry Smith . is - the array of index sets 86247c6ae99SBarry Smith 86347c6ae99SBarry Smith Level: advanced 86447c6ae99SBarry Smith 86547c6ae99SBarry Smith Notes: 86647c6ae99SBarry Smith The is entries should be destroyed with ISDestroy(), the is array should be freed with PetscFree() 86747c6ae99SBarry Smith 86847c6ae99SBarry Smith These could be used to extract a subset of vector entries for a "multi-physics" preconditioner 86947c6ae99SBarry Smith 8706eb61c8cSJed Brown Use DMCompositeGetLocalISs() for index sets in the packed local numbering, and 8716eb61c8cSJed Brown DMCompositeGetISLocalToGlobalMappings() for to map local sub-DM (including ghost) indices to packed global 8726eb61c8cSJed Brown indices. 87347c6ae99SBarry Smith 8749ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 87547c6ae99SBarry Smith DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(), 87647c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries() 87747c6ae99SBarry Smith 87847c6ae99SBarry Smith @*/ 8796eb61c8cSJed Brown 8807087cfbeSBarry Smith PetscErrorCode DMCompositeGetGlobalISs(DM dm,IS *is[]) 88147c6ae99SBarry Smith { 88247c6ae99SBarry Smith PetscErrorCode ierr; 88347c6ae99SBarry Smith PetscInt cnt = 0,*idx,i; 88447c6ae99SBarry Smith struct DMCompositeLink *next; 88547c6ae99SBarry Smith PetscMPIInt rank; 88647c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 88747c6ae99SBarry Smith 88847c6ae99SBarry Smith PetscFunctionBegin; 88947c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 8909ae5db72SJed Brown ierr = PetscMalloc((com->nDM)*sizeof(IS),is);CHKERRQ(ierr); 89147c6ae99SBarry Smith next = com->next; 892ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 89347c6ae99SBarry Smith 89447c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 89547c6ae99SBarry Smith while (next) { 89647c6ae99SBarry Smith ierr = PetscMalloc(next->n*sizeof(PetscInt),&idx);CHKERRQ(ierr); 89747c6ae99SBarry Smith for (i=0; i<next->n; i++) idx[i] = next->grstart + i; 898ce94432eSBarry Smith ierr = ISCreateGeneral(PetscObjectComm((PetscObject)dm),next->n,idx,PETSC_OWN_POINTER,&(*is)[cnt]);CHKERRQ(ierr); 89947c6ae99SBarry Smith cnt++; 90047c6ae99SBarry Smith next = next->next; 90147c6ae99SBarry Smith } 90247c6ae99SBarry Smith PetscFunctionReturn(0); 90347c6ae99SBarry Smith } 90447c6ae99SBarry Smith 9054d343eeaSMatthew G Knepley #undef __FUNCT__ 9064d343eeaSMatthew G Knepley #define __FUNCT__ "DMCreateFieldIS_Composite" 90721c9b008SJed Brown PetscErrorCode DMCreateFieldIS_Composite(DM dm, PetscInt *numFields,char ***fieldNames, IS **fields) 9084d343eeaSMatthew G Knepley { 9094d343eeaSMatthew G Knepley PetscInt nDM; 9104d343eeaSMatthew G Knepley DM *dms; 9114d343eeaSMatthew G Knepley PetscInt i; 9124d343eeaSMatthew G Knepley PetscErrorCode ierr; 9134d343eeaSMatthew G Knepley 9144d343eeaSMatthew G Knepley PetscFunctionBegin; 9154d343eeaSMatthew G Knepley ierr = DMCompositeGetNumberDM(dm, &nDM);CHKERRQ(ierr); 9168865f1eaSKarl Rupp if (numFields) *numFields = nDM; 9174d343eeaSMatthew G Knepley ierr = DMCompositeGetGlobalISs(dm, fields);CHKERRQ(ierr); 9184d343eeaSMatthew G Knepley if (fieldNames) { 9194d343eeaSMatthew G Knepley ierr = PetscMalloc(nDM*sizeof(DM), &dms);CHKERRQ(ierr); 9204d343eeaSMatthew G Knepley ierr = PetscMalloc(nDM*sizeof(const char*), fieldNames);CHKERRQ(ierr); 9214d343eeaSMatthew G Knepley ierr = DMCompositeGetEntriesArray(dm, dms);CHKERRQ(ierr); 9224d343eeaSMatthew G Knepley for (i=0; i<nDM; i++) { 9234d343eeaSMatthew G Knepley char buf[256]; 9244d343eeaSMatthew G Knepley const char *splitname; 9254d343eeaSMatthew G Knepley 9264d343eeaSMatthew G Knepley /* Split naming precedence: object name, prefix, number */ 9274d343eeaSMatthew G Knepley splitname = ((PetscObject) dm)->name; 9284d343eeaSMatthew G Knepley if (!splitname) { 9294d343eeaSMatthew G Knepley ierr = PetscObjectGetOptionsPrefix((PetscObject)dms[i],&splitname);CHKERRQ(ierr); 9304d343eeaSMatthew G Knepley if (splitname) { 9314d343eeaSMatthew G Knepley size_t len; 9328caf3d72SBarry Smith ierr = PetscStrncpy(buf,splitname,sizeof(buf));CHKERRQ(ierr); 9338caf3d72SBarry Smith buf[sizeof(buf) - 1] = 0; 9344d343eeaSMatthew G Knepley ierr = PetscStrlen(buf,&len);CHKERRQ(ierr); 9354d343eeaSMatthew G Knepley if (buf[len-1] == '_') buf[len-1] = 0; /* Remove trailing underscore if it was used */ 9364d343eeaSMatthew G Knepley splitname = buf; 9374d343eeaSMatthew G Knepley } 9384d343eeaSMatthew G Knepley } 9394d343eeaSMatthew G Knepley if (!splitname) { 9408caf3d72SBarry Smith ierr = PetscSNPrintf(buf,sizeof(buf),"%D",i);CHKERRQ(ierr); 9414d343eeaSMatthew G Knepley splitname = buf; 9424d343eeaSMatthew G Knepley } 94321c9b008SJed Brown ierr = PetscStrallocpy(splitname,&(*fieldNames)[i]);CHKERRQ(ierr); 9444d343eeaSMatthew G Knepley } 9454d343eeaSMatthew G Knepley ierr = PetscFree(dms);CHKERRQ(ierr); 9464d343eeaSMatthew G Knepley } 9474d343eeaSMatthew G Knepley PetscFunctionReturn(0); 9484d343eeaSMatthew G Knepley } 9494d343eeaSMatthew G Knepley 950e7c4fc90SDmitry Karpeev /* 951e7c4fc90SDmitry Karpeev This could take over from DMCreateFieldIS(), as it is more general, 9520298fd71SBarry Smith making DMCreateFieldIS() a special case -- calling with dmlist == NULL; 953e7c4fc90SDmitry Karpeev At this point it's probably best to be less intrusive, however. 954e7c4fc90SDmitry Karpeev */ 955e7c4fc90SDmitry Karpeev #undef __FUNCT__ 95616621825SDmitry Karpeev #define __FUNCT__ "DMCreateFieldDecomposition_Composite" 95716621825SDmitry Karpeev PetscErrorCode DMCreateFieldDecomposition_Composite(DM dm, PetscInt *len,char ***namelist, IS **islist, DM **dmlist) 958e7c4fc90SDmitry Karpeev { 959e7c4fc90SDmitry Karpeev PetscInt nDM; 960e7c4fc90SDmitry Karpeev PetscInt i; 961e7c4fc90SDmitry Karpeev PetscErrorCode ierr; 962e7c4fc90SDmitry Karpeev 963e7c4fc90SDmitry Karpeev PetscFunctionBegin; 964e7c4fc90SDmitry Karpeev ierr = DMCreateFieldIS_Composite(dm, len, namelist, islist);CHKERRQ(ierr); 965e7c4fc90SDmitry Karpeev if (dmlist) { 966e7c4fc90SDmitry Karpeev ierr = DMCompositeGetNumberDM(dm, &nDM);CHKERRQ(ierr); 967e7c4fc90SDmitry Karpeev ierr = PetscMalloc(nDM*sizeof(DM), dmlist);CHKERRQ(ierr); 968e7c4fc90SDmitry Karpeev ierr = DMCompositeGetEntriesArray(dm, *dmlist);CHKERRQ(ierr); 969e7c4fc90SDmitry Karpeev for (i=0; i<nDM; i++) { 970e7c4fc90SDmitry Karpeev ierr = PetscObjectReference((PetscObject)((*dmlist)[i]));CHKERRQ(ierr); 971e7c4fc90SDmitry Karpeev } 972e7c4fc90SDmitry Karpeev } 973e7c4fc90SDmitry Karpeev PetscFunctionReturn(0); 974e7c4fc90SDmitry Karpeev } 975e7c4fc90SDmitry Karpeev 976e7c4fc90SDmitry Karpeev 977e7c4fc90SDmitry Karpeev 97847c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 97947c6ae99SBarry Smith #undef __FUNCT__ 98047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors" 98147c6ae99SBarry Smith /*@C 9829ae5db72SJed Brown DMCompositeGetLocalVectors - Gets local vectors for each part of a DMComposite. 98347c6ae99SBarry Smith Use DMCompositeRestoreLocalVectors() to return them. 98447c6ae99SBarry Smith 98547c6ae99SBarry Smith Not Collective 98647c6ae99SBarry Smith 98747c6ae99SBarry Smith Input Parameter: 98847c6ae99SBarry Smith . dm - the packer object 98947c6ae99SBarry Smith 99047c6ae99SBarry Smith Output Parameter: 9919ae5db72SJed Brown . Vec ... - the individual sequential Vecs 99247c6ae99SBarry Smith 99347c6ae99SBarry Smith Level: advanced 99447c6ae99SBarry Smith 9959ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 9966eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 99747c6ae99SBarry Smith DMCompositeRestoreLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries() 99847c6ae99SBarry Smith 99947c6ae99SBarry Smith @*/ 10007087cfbeSBarry Smith PetscErrorCode DMCompositeGetLocalVectors(DM dm,...) 100147c6ae99SBarry Smith { 100247c6ae99SBarry Smith va_list Argp; 100347c6ae99SBarry Smith PetscErrorCode ierr; 100447c6ae99SBarry Smith struct DMCompositeLink *next; 100547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 100647c6ae99SBarry Smith 100747c6ae99SBarry Smith PetscFunctionBegin; 100847c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 100947c6ae99SBarry Smith next = com->next; 101047c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 101147c6ae99SBarry Smith va_start(Argp,dm); 101247c6ae99SBarry Smith while (next) { 101347c6ae99SBarry Smith Vec *vec; 101447c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 101506930112SJed Brown if (vec) {ierr = DMGetLocalVector(next->dm,vec);CHKERRQ(ierr);} 101647c6ae99SBarry Smith next = next->next; 101747c6ae99SBarry Smith } 101847c6ae99SBarry Smith va_end(Argp); 101947c6ae99SBarry Smith PetscFunctionReturn(0); 102047c6ae99SBarry Smith } 102147c6ae99SBarry Smith 102247c6ae99SBarry Smith #undef __FUNCT__ 102347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors" 102447c6ae99SBarry Smith /*@C 10259ae5db72SJed Brown DMCompositeRestoreLocalVectors - Restores local vectors for each part of a DMComposite. 102647c6ae99SBarry Smith 102747c6ae99SBarry Smith Not Collective 102847c6ae99SBarry Smith 102947c6ae99SBarry Smith Input Parameter: 103047c6ae99SBarry Smith . dm - the packer object 103147c6ae99SBarry Smith 103247c6ae99SBarry Smith Output Parameter: 10339ae5db72SJed Brown . Vec ... - the individual sequential Vecs 103447c6ae99SBarry Smith 103547c6ae99SBarry Smith Level: advanced 103647c6ae99SBarry Smith 10379ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 10386eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 103947c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries() 104047c6ae99SBarry Smith 104147c6ae99SBarry Smith @*/ 10427087cfbeSBarry Smith PetscErrorCode DMCompositeRestoreLocalVectors(DM dm,...) 104347c6ae99SBarry Smith { 104447c6ae99SBarry Smith va_list Argp; 104547c6ae99SBarry Smith PetscErrorCode ierr; 104647c6ae99SBarry Smith struct DMCompositeLink *next; 104747c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 104847c6ae99SBarry Smith 104947c6ae99SBarry Smith PetscFunctionBegin; 105047c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 105147c6ae99SBarry Smith next = com->next; 105247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 105347c6ae99SBarry Smith va_start(Argp,dm); 105447c6ae99SBarry Smith while (next) { 105547c6ae99SBarry Smith Vec *vec; 105647c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 105706930112SJed Brown if (vec) {ierr = DMRestoreLocalVector(next->dm,vec);CHKERRQ(ierr);} 105847c6ae99SBarry Smith next = next->next; 105947c6ae99SBarry Smith } 106047c6ae99SBarry Smith va_end(Argp); 106147c6ae99SBarry Smith PetscFunctionReturn(0); 106247c6ae99SBarry Smith } 106347c6ae99SBarry Smith 106447c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 106547c6ae99SBarry Smith #undef __FUNCT__ 106647c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries" 106747c6ae99SBarry Smith /*@C 10689ae5db72SJed Brown DMCompositeGetEntries - Gets the DM for each entry in a DMComposite. 106947c6ae99SBarry Smith 107047c6ae99SBarry Smith Not Collective 107147c6ae99SBarry Smith 107247c6ae99SBarry Smith Input Parameter: 107347c6ae99SBarry Smith . dm - the packer object 107447c6ae99SBarry Smith 107547c6ae99SBarry Smith Output Parameter: 10769ae5db72SJed Brown . DM ... - the individual entries (DMs) 107747c6ae99SBarry Smith 107847c6ae99SBarry Smith Level: advanced 107947c6ae99SBarry Smith 10802fa5ba8aSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), DMCompositeGetEntriesArray() 10816eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 108247c6ae99SBarry Smith DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(), DMCompositeScatter(), 108347c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors() 108447c6ae99SBarry Smith 108547c6ae99SBarry Smith @*/ 10867087cfbeSBarry Smith PetscErrorCode DMCompositeGetEntries(DM dm,...) 108747c6ae99SBarry Smith { 108847c6ae99SBarry Smith va_list Argp; 108947c6ae99SBarry Smith struct DMCompositeLink *next; 109047c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 109147c6ae99SBarry Smith 109247c6ae99SBarry Smith PetscFunctionBegin; 109347c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 109447c6ae99SBarry Smith next = com->next; 109547c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 109647c6ae99SBarry Smith va_start(Argp,dm); 109747c6ae99SBarry Smith while (next) { 109847c6ae99SBarry Smith DM *dmn; 109947c6ae99SBarry Smith dmn = va_arg(Argp, DM*); 11009ae5db72SJed Brown if (dmn) *dmn = next->dm; 110147c6ae99SBarry Smith next = next->next; 110247c6ae99SBarry Smith } 110347c6ae99SBarry Smith va_end(Argp); 110447c6ae99SBarry Smith PetscFunctionReturn(0); 110547c6ae99SBarry Smith } 110647c6ae99SBarry Smith 110747c6ae99SBarry Smith #undef __FUNCT__ 11082fa5ba8aSJed Brown #define __FUNCT__ "DMCompositeGetEntriesArray" 1109dbab29e1SMark F. Adams /*@C 11102fa5ba8aSJed Brown DMCompositeGetEntriesArray - Gets the DM for each entry in a DMComposite. 11112fa5ba8aSJed Brown 11122fa5ba8aSJed Brown Not Collective 11132fa5ba8aSJed Brown 11142fa5ba8aSJed Brown Input Parameter: 11152fa5ba8aSJed Brown + dm - the packer object 11162fa5ba8aSJed Brown - dms - array of sufficient length (see DMCompositeGetNumberDM()), holds the DMs on output 11172fa5ba8aSJed Brown 11182fa5ba8aSJed Brown Level: advanced 11192fa5ba8aSJed Brown 11202fa5ba8aSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), DMCompositeGetEntries() 11212fa5ba8aSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 11222fa5ba8aSJed Brown DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(), DMCompositeScatter(), 11232fa5ba8aSJed Brown DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors() 11242fa5ba8aSJed Brown 11252fa5ba8aSJed Brown @*/ 11262fa5ba8aSJed Brown PetscErrorCode DMCompositeGetEntriesArray(DM dm,DM dms[]) 11272fa5ba8aSJed Brown { 11282fa5ba8aSJed Brown struct DMCompositeLink *next; 11292fa5ba8aSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 11302fa5ba8aSJed Brown PetscInt i; 11312fa5ba8aSJed Brown 11322fa5ba8aSJed Brown PetscFunctionBegin; 11332fa5ba8aSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 11342fa5ba8aSJed Brown /* loop over packed objects, handling one at at time */ 11352fa5ba8aSJed Brown for (next=com->next,i=0; next; next=next->next,i++) dms[i] = next->dm; 11362fa5ba8aSJed Brown PetscFunctionReturn(0); 11372fa5ba8aSJed Brown } 11382fa5ba8aSJed Brown 11392fa5ba8aSJed Brown #undef __FUNCT__ 11400c010503SBarry Smith #define __FUNCT__ "DMRefine_Composite" 11417087cfbeSBarry Smith PetscErrorCode DMRefine_Composite(DM dmi,MPI_Comm comm,DM *fine) 114247c6ae99SBarry Smith { 114347c6ae99SBarry Smith PetscErrorCode ierr; 114447c6ae99SBarry Smith struct DMCompositeLink *next; 114547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dmi->data; 114647c6ae99SBarry Smith DM dm; 114747c6ae99SBarry Smith 114847c6ae99SBarry Smith PetscFunctionBegin; 114947c6ae99SBarry Smith PetscValidHeaderSpecific(dmi,DM_CLASSID,1); 1150ce94432eSBarry Smith if (comm == MPI_COMM_NULL) { 1151ce94432eSBarry Smith ierr = PetscObjectGetComm((PetscObject)dmi,&comm);CHKERRQ(ierr); 1152ce94432eSBarry Smith } 11532ce3a92bSJed Brown ierr = DMSetUp(dmi);CHKERRQ(ierr); 115447c6ae99SBarry Smith next = com->next; 115547c6ae99SBarry Smith ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr); 115647c6ae99SBarry Smith 115747c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 115847c6ae99SBarry Smith while (next) { 115947c6ae99SBarry Smith ierr = DMRefine(next->dm,comm,&dm);CHKERRQ(ierr); 116047c6ae99SBarry Smith ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr); 116147c6ae99SBarry Smith ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr); 116247c6ae99SBarry Smith next = next->next; 116347c6ae99SBarry Smith } 116447c6ae99SBarry Smith PetscFunctionReturn(0); 116547c6ae99SBarry Smith } 116647c6ae99SBarry Smith 116714354c39SJed Brown #undef __FUNCT__ 116814354c39SJed Brown #define __FUNCT__ "DMCoarsen_Composite" 116914354c39SJed Brown PetscErrorCode DMCoarsen_Composite(DM dmi,MPI_Comm comm,DM *fine) 117014354c39SJed Brown { 117114354c39SJed Brown PetscErrorCode ierr; 117214354c39SJed Brown struct DMCompositeLink *next; 117314354c39SJed Brown DM_Composite *com = (DM_Composite*)dmi->data; 117414354c39SJed Brown DM dm; 117514354c39SJed Brown 117614354c39SJed Brown PetscFunctionBegin; 117714354c39SJed Brown PetscValidHeaderSpecific(dmi,DM_CLASSID,1); 11782ce3a92bSJed Brown ierr = DMSetUp(dmi);CHKERRQ(ierr); 11792ee06e3bSJed Brown if (comm == MPI_COMM_NULL) { 118025296bd5SBarry Smith ierr = PetscObjectGetComm((PetscObject)dmi,&comm);CHKERRQ(ierr); 118125296bd5SBarry Smith } 118214354c39SJed Brown next = com->next; 118314354c39SJed Brown ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr); 118414354c39SJed Brown 118514354c39SJed Brown /* loop over packed objects, handling one at at time */ 118614354c39SJed Brown while (next) { 118714354c39SJed Brown ierr = DMCoarsen(next->dm,comm,&dm);CHKERRQ(ierr); 118814354c39SJed Brown ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr); 118914354c39SJed Brown ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr); 119014354c39SJed Brown next = next->next; 119114354c39SJed Brown } 119214354c39SJed Brown PetscFunctionReturn(0); 119314354c39SJed Brown } 119447c6ae99SBarry Smith 119547c6ae99SBarry Smith #undef __FUNCT__ 1196e727c939SJed Brown #define __FUNCT__ "DMCreateInterpolation_Composite" 1197e727c939SJed Brown PetscErrorCode DMCreateInterpolation_Composite(DM coarse,DM fine,Mat *A,Vec *v) 119847c6ae99SBarry Smith { 119947c6ae99SBarry Smith PetscErrorCode ierr; 12009ae5db72SJed Brown PetscInt m,n,M,N,nDM,i; 120147c6ae99SBarry Smith struct DMCompositeLink *nextc; 120247c6ae99SBarry Smith struct DMCompositeLink *nextf; 120325296bd5SBarry Smith Vec gcoarse,gfine,*vecs; 120447c6ae99SBarry Smith DM_Composite *comcoarse = (DM_Composite*)coarse->data; 120547c6ae99SBarry Smith DM_Composite *comfine = (DM_Composite*)fine->data; 12069ae5db72SJed Brown Mat *mats; 120747c6ae99SBarry Smith 120847c6ae99SBarry Smith PetscFunctionBegin; 120947c6ae99SBarry Smith PetscValidHeaderSpecific(coarse,DM_CLASSID,1); 121047c6ae99SBarry Smith PetscValidHeaderSpecific(fine,DM_CLASSID,2); 1211f692024eSJed Brown ierr = DMSetUp(coarse);CHKERRQ(ierr); 1212f692024eSJed Brown ierr = DMSetUp(fine);CHKERRQ(ierr); 121347c6ae99SBarry Smith /* use global vectors only for determining matrix layout */ 12149ae5db72SJed Brown ierr = DMGetGlobalVector(coarse,&gcoarse);CHKERRQ(ierr); 12159ae5db72SJed Brown ierr = DMGetGlobalVector(fine,&gfine);CHKERRQ(ierr); 121647c6ae99SBarry Smith ierr = VecGetLocalSize(gcoarse,&n);CHKERRQ(ierr); 121747c6ae99SBarry Smith ierr = VecGetLocalSize(gfine,&m);CHKERRQ(ierr); 121847c6ae99SBarry Smith ierr = VecGetSize(gcoarse,&N);CHKERRQ(ierr); 121947c6ae99SBarry Smith ierr = VecGetSize(gfine,&M);CHKERRQ(ierr); 12209ae5db72SJed Brown ierr = DMRestoreGlobalVector(coarse,&gcoarse);CHKERRQ(ierr); 12219ae5db72SJed Brown ierr = DMRestoreGlobalVector(fine,&gfine);CHKERRQ(ierr); 122247c6ae99SBarry Smith 12239ae5db72SJed Brown nDM = comfine->nDM; 1224ce94432eSBarry Smith if (nDM != comcoarse->nDM) SETERRQ2(PetscObjectComm((PetscObject)fine),PETSC_ERR_ARG_INCOMP,"Fine DMComposite has %D entries, but coarse has %D",nDM,comcoarse->nDM); 12259ae5db72SJed Brown ierr = PetscMalloc(nDM*nDM*sizeof(Mat),&mats);CHKERRQ(ierr); 12269ae5db72SJed Brown ierr = PetscMemzero(mats,nDM*nDM*sizeof(Mat));CHKERRQ(ierr); 122725296bd5SBarry Smith if (v) { 122825296bd5SBarry Smith ierr = PetscMalloc(nDM*sizeof(Vec),&vecs);CHKERRQ(ierr); 122925296bd5SBarry Smith ierr = PetscMemzero(vecs,nDM*sizeof(Vec));CHKERRQ(ierr); 123025296bd5SBarry Smith } 123147c6ae99SBarry Smith 123247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 12339ae5db72SJed Brown for (nextc=comcoarse->next,nextf=comfine->next,i=0; nextc; nextc=nextc->next,nextf=nextf->next,i++) { 123425296bd5SBarry Smith if (!v) { 12350298fd71SBarry Smith ierr = DMCreateInterpolation(nextc->dm,nextf->dm,&mats[i*nDM+i],NULL);CHKERRQ(ierr); 123625296bd5SBarry Smith } else { 123725296bd5SBarry Smith ierr = DMCreateInterpolation(nextc->dm,nextf->dm,&mats[i*nDM+i],&vecs[i]);CHKERRQ(ierr); 123825296bd5SBarry Smith } 123947c6ae99SBarry Smith } 1240ce94432eSBarry Smith ierr = MatCreateNest(PetscObjectComm((PetscObject)fine),nDM,NULL,nDM,NULL,mats,A);CHKERRQ(ierr); 124125296bd5SBarry Smith if (v) { 1242ce94432eSBarry Smith ierr = VecCreateNest(PetscObjectComm((PetscObject)fine),nDM,NULL,vecs,v);CHKERRQ(ierr); 124325296bd5SBarry Smith } 12449ae5db72SJed Brown for (i=0; i<nDM*nDM; i++) {ierr = MatDestroy(&mats[i]);CHKERRQ(ierr);} 12459ae5db72SJed Brown ierr = PetscFree(mats);CHKERRQ(ierr); 124625296bd5SBarry Smith if (v) { 124725296bd5SBarry Smith for (i=0; i<nDM; i++) {ierr = VecDestroy(&vecs[i]);CHKERRQ(ierr);} 124825296bd5SBarry Smith ierr = PetscFree(vecs);CHKERRQ(ierr); 124925296bd5SBarry Smith } 125047c6ae99SBarry Smith PetscFunctionReturn(0); 125147c6ae99SBarry Smith } 125247c6ae99SBarry Smith 125347c6ae99SBarry Smith #undef __FUNCT__ 12541411c6eeSJed Brown #define __FUNCT__ "DMCreateLocalToGlobalMapping_Composite" 12551411c6eeSJed Brown static PetscErrorCode DMCreateLocalToGlobalMapping_Composite(DM dm) 12561411c6eeSJed Brown { 12571411c6eeSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 12581411c6eeSJed Brown ISLocalToGlobalMapping *ltogs; 1259f7efa3c7SJed Brown PetscInt i; 12601411c6eeSJed Brown PetscErrorCode ierr; 12611411c6eeSJed Brown 12621411c6eeSJed Brown PetscFunctionBegin; 12631411c6eeSJed Brown /* Set the ISLocalToGlobalMapping on the new matrix */ 12641411c6eeSJed Brown ierr = DMCompositeGetISLocalToGlobalMappings(dm,<ogs);CHKERRQ(ierr); 1265ce94432eSBarry Smith ierr = ISLocalToGlobalMappingConcatenate(PetscObjectComm((PetscObject)dm),com->nDM,ltogs,&dm->ltogmap);CHKERRQ(ierr); 12669ae5db72SJed Brown for (i=0; i<com->nDM; i++) {ierr = ISLocalToGlobalMappingDestroy(<ogs[i]);CHKERRQ(ierr);} 12671411c6eeSJed Brown ierr = PetscFree(ltogs);CHKERRQ(ierr); 12681411c6eeSJed Brown PetscFunctionReturn(0); 12691411c6eeSJed Brown } 12701411c6eeSJed Brown 12711411c6eeSJed Brown 12721411c6eeSJed Brown #undef __FUNCT__ 1273e727c939SJed Brown #define __FUNCT__ "DMCreateColoring_Composite" 127419fd82e9SBarry Smith PetscErrorCode DMCreateColoring_Composite(DM dm,ISColoringType ctype,MatType mtype,ISColoring *coloring) 127547c6ae99SBarry Smith { 127647c6ae99SBarry Smith PetscErrorCode ierr; 127747c6ae99SBarry Smith PetscInt n,i,cnt; 127847c6ae99SBarry Smith ISColoringValue *colors; 127947c6ae99SBarry Smith PetscBool dense = PETSC_FALSE; 128047c6ae99SBarry Smith ISColoringValue maxcol = 0; 128147c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 128247c6ae99SBarry Smith 128347c6ae99SBarry Smith PetscFunctionBegin; 128447c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 1285ce94432eSBarry Smith if (ctype == IS_COLORING_GHOSTED) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_SUP,"Only global coloring supported"); 1286e3247f34SBarry Smith else if (ctype == IS_COLORING_GLOBAL) { 128747c6ae99SBarry Smith n = com->n; 1288ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_ARG_OUTOFRANGE,"Unknown ISColoringType"); 128947c6ae99SBarry Smith ierr = PetscMalloc(n*sizeof(ISColoringValue),&colors);CHKERRQ(ierr); /* freed in ISColoringDestroy() */ 129047c6ae99SBarry Smith 12910298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-dmcomposite_dense_jacobian",&dense,NULL);CHKERRQ(ierr); 129247c6ae99SBarry Smith if (dense) { 129347c6ae99SBarry Smith for (i=0; i<n; i++) { 129447c6ae99SBarry Smith colors[i] = (ISColoringValue)(com->rstart + i); 129547c6ae99SBarry Smith } 129647c6ae99SBarry Smith maxcol = com->N; 129747c6ae99SBarry Smith } else { 129847c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 129947c6ae99SBarry Smith PetscMPIInt rank; 130047c6ae99SBarry Smith 1301ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 130247c6ae99SBarry Smith cnt = 0; 130347c6ae99SBarry Smith while (next) { 130447c6ae99SBarry Smith ISColoring lcoloring; 130547c6ae99SBarry Smith 1306e727c939SJed Brown ierr = DMCreateColoring(next->dm,IS_COLORING_GLOBAL,mtype,&lcoloring);CHKERRQ(ierr); 130747c6ae99SBarry Smith for (i=0; i<lcoloring->N; i++) { 130847c6ae99SBarry Smith colors[cnt++] = maxcol + lcoloring->colors[i]; 130947c6ae99SBarry Smith } 131047c6ae99SBarry Smith maxcol += lcoloring->n; 1311fcfd50ebSBarry Smith ierr = ISColoringDestroy(&lcoloring);CHKERRQ(ierr); 131247c6ae99SBarry Smith next = next->next; 131347c6ae99SBarry Smith } 131447c6ae99SBarry Smith } 1315ce94432eSBarry Smith ierr = ISColoringCreate(PetscObjectComm((PetscObject)dm),maxcol,n,colors,coloring);CHKERRQ(ierr); 131647c6ae99SBarry Smith PetscFunctionReturn(0); 131747c6ae99SBarry Smith } 131847c6ae99SBarry Smith 131947c6ae99SBarry Smith #undef __FUNCT__ 13200c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalBegin_Composite" 13217087cfbeSBarry Smith PetscErrorCode DMGlobalToLocalBegin_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec) 132247c6ae99SBarry Smith { 132347c6ae99SBarry Smith PetscErrorCode ierr; 132447c6ae99SBarry Smith struct DMCompositeLink *next; 132547c6ae99SBarry Smith PetscInt cnt = 3; 132647c6ae99SBarry Smith PetscMPIInt rank; 132747c6ae99SBarry Smith PetscScalar *garray,*larray; 132847c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 132947c6ae99SBarry Smith 133047c6ae99SBarry Smith PetscFunctionBegin; 133147c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 133247c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 133347c6ae99SBarry Smith next = com->next; 133447c6ae99SBarry Smith if (!com->setup) { 1335d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 133647c6ae99SBarry Smith } 1337ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 133847c6ae99SBarry Smith ierr = VecGetArray(gvec,&garray);CHKERRQ(ierr); 133947c6ae99SBarry Smith ierr = VecGetArray(lvec,&larray);CHKERRQ(ierr); 134047c6ae99SBarry Smith 134147c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 134247c6ae99SBarry Smith while (next) { 134347c6ae99SBarry Smith Vec local,global; 134447c6ae99SBarry Smith PetscInt N; 134547c6ae99SBarry Smith 134647c6ae99SBarry Smith ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 134747c6ae99SBarry Smith ierr = VecGetLocalSize(global,&N);CHKERRQ(ierr); 134847c6ae99SBarry Smith ierr = VecPlaceArray(global,garray);CHKERRQ(ierr); 134947c6ae99SBarry Smith ierr = DMGetLocalVector(next->dm,&local);CHKERRQ(ierr); 135047c6ae99SBarry Smith ierr = VecPlaceArray(local,larray);CHKERRQ(ierr); 135147c6ae99SBarry Smith ierr = DMGlobalToLocalBegin(next->dm,global,mode,local);CHKERRQ(ierr); 135247c6ae99SBarry Smith ierr = DMGlobalToLocalEnd(next->dm,global,mode,local);CHKERRQ(ierr); 135347c6ae99SBarry Smith ierr = VecResetArray(global);CHKERRQ(ierr); 135447c6ae99SBarry Smith ierr = VecResetArray(local);CHKERRQ(ierr); 135547c6ae99SBarry Smith ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 135647c6ae99SBarry Smith ierr = DMRestoreGlobalVector(next->dm,&local);CHKERRQ(ierr); 135747c6ae99SBarry Smith cnt++; 135806ebdd98SJed Brown larray += next->nlocal; 135947c6ae99SBarry Smith next = next->next; 136047c6ae99SBarry Smith } 136147c6ae99SBarry Smith 13620298fd71SBarry Smith ierr = VecRestoreArray(gvec,NULL);CHKERRQ(ierr); 13630298fd71SBarry Smith ierr = VecRestoreArray(lvec,NULL);CHKERRQ(ierr); 136447c6ae99SBarry Smith PetscFunctionReturn(0); 136547c6ae99SBarry Smith } 136647c6ae99SBarry Smith 136747c6ae99SBarry Smith #undef __FUNCT__ 13680c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalEnd_Composite" 13697087cfbeSBarry Smith PetscErrorCode DMGlobalToLocalEnd_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec) 13700c010503SBarry Smith { 13710c010503SBarry Smith PetscFunctionBegin; 13720c010503SBarry Smith PetscFunctionReturn(0); 13730c010503SBarry Smith } 137447c6ae99SBarry Smith 13756ae3a549SBarry Smith /*MC 13766ae3a549SBarry Smith DMCOMPOSITE = "composite" - A DM object that is used to manage data for a collection of DMs 13776ae3a549SBarry Smith 13786ae3a549SBarry Smith 13796ae3a549SBarry Smith 13806ae3a549SBarry Smith Level: intermediate 13816ae3a549SBarry Smith 13826ae3a549SBarry Smith .seealso: DMType, DMCOMPOSITE, DMDACreate(), DMCreate(), DMSetType(), DMCompositeCreate() 13836ae3a549SBarry Smith M*/ 13846ae3a549SBarry Smith 13856ae3a549SBarry Smith 1386a4121054SBarry Smith EXTERN_C_BEGIN 1387a4121054SBarry Smith #undef __FUNCT__ 1388a4121054SBarry Smith #define __FUNCT__ "DMCreate_Composite" 13897087cfbeSBarry Smith PetscErrorCode DMCreate_Composite(DM p) 1390a4121054SBarry Smith { 1391a4121054SBarry Smith PetscErrorCode ierr; 1392a4121054SBarry Smith DM_Composite *com; 1393a4121054SBarry Smith 1394a4121054SBarry Smith PetscFunctionBegin; 1395a4121054SBarry Smith ierr = PetscNewLog(p,DM_Composite,&com);CHKERRQ(ierr); 1396a4121054SBarry Smith p->data = com; 1397a4121054SBarry Smith ierr = PetscObjectChangeTypeName((PetscObject)p,"DMComposite");CHKERRQ(ierr); 1398a4121054SBarry Smith com->n = 0; 13990298fd71SBarry Smith com->next = NULL; 1400a4121054SBarry Smith com->nDM = 0; 1401a4121054SBarry Smith 1402a4121054SBarry Smith p->ops->createglobalvector = DMCreateGlobalVector_Composite; 1403a4121054SBarry Smith p->ops->createlocalvector = DMCreateLocalVector_Composite; 14041411c6eeSJed Brown p->ops->createlocaltoglobalmapping = DMCreateLocalToGlobalMapping_Composite; 14051411c6eeSJed Brown p->ops->createlocaltoglobalmappingblock = 0; 14064d343eeaSMatthew G Knepley p->ops->createfieldis = DMCreateFieldIS_Composite; 140716621825SDmitry Karpeev p->ops->createfielddecomposition = DMCreateFieldDecomposition_Composite; 1408a4121054SBarry Smith p->ops->refine = DMRefine_Composite; 140914354c39SJed Brown p->ops->coarsen = DMCoarsen_Composite; 141025296bd5SBarry Smith p->ops->createinterpolation = DMCreateInterpolation_Composite; 141125296bd5SBarry Smith p->ops->creatematrix = DMCreateMatrix_Composite; 1412e727c939SJed Brown p->ops->getcoloring = DMCreateColoring_Composite; 1413a4121054SBarry Smith p->ops->globaltolocalbegin = DMGlobalToLocalBegin_Composite; 1414a4121054SBarry Smith p->ops->globaltolocalend = DMGlobalToLocalEnd_Composite; 1415a4121054SBarry Smith p->ops->destroy = DMDestroy_Composite; 1416a4121054SBarry Smith p->ops->view = DMView_Composite; 1417a4121054SBarry Smith p->ops->setup = DMSetUp_Composite; 1418a4121054SBarry Smith PetscFunctionReturn(0); 1419a4121054SBarry Smith } 1420a4121054SBarry Smith EXTERN_C_END 1421a4121054SBarry Smith 14220c010503SBarry Smith #undef __FUNCT__ 14230c010503SBarry Smith #define __FUNCT__ "DMCompositeCreate" 14240c010503SBarry Smith /*@C 14250c010503SBarry Smith DMCompositeCreate - Creates a vector packer, used to generate "composite" 14260c010503SBarry Smith vectors made up of several subvectors. 14270c010503SBarry Smith 14280c010503SBarry Smith Collective on MPI_Comm 142947c6ae99SBarry Smith 143047c6ae99SBarry Smith Input Parameter: 14310c010503SBarry Smith . comm - the processors that will share the global vector 14320c010503SBarry Smith 14330c010503SBarry Smith Output Parameters: 14340c010503SBarry Smith . packer - the packer object 143547c6ae99SBarry Smith 143647c6ae99SBarry Smith Level: advanced 143747c6ae99SBarry Smith 14389ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCompositeScatter(), 14396eb61c8cSJed Brown DMCompositeGather(), DMCreateGlobalVector(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess() 144047c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 144147c6ae99SBarry Smith 144247c6ae99SBarry Smith @*/ 14437087cfbeSBarry Smith PetscErrorCode DMCompositeCreate(MPI_Comm comm,DM *packer) 144447c6ae99SBarry Smith { 14450c010503SBarry Smith PetscErrorCode ierr; 14460c010503SBarry Smith 144747c6ae99SBarry Smith PetscFunctionBegin; 14480c010503SBarry Smith PetscValidPointer(packer,2); 1449a4121054SBarry Smith ierr = DMCreate(comm,packer);CHKERRQ(ierr); 1450a4121054SBarry Smith ierr = DMSetType(*packer,DMCOMPOSITE);CHKERRQ(ierr); 145147c6ae99SBarry Smith PetscFunctionReturn(0); 145247c6ae99SBarry Smith } 1453