xref: /petsc/src/dm/impls/composite/pack.c (revision 8cc058d9cd56c1ccb3be12a47760ddfc446aaffc)
147c6ae99SBarry Smith 
2ccd284c7SBarry Smith #include <../src/dm/impls/composite/packimpl.h>       /*I  "petscdmcomposite.h"  I*/
347c6ae99SBarry Smith 
447c6ae99SBarry Smith #undef __FUNCT__
547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeSetCoupling"
647c6ae99SBarry Smith /*@C
747c6ae99SBarry Smith     DMCompositeSetCoupling - Sets user provided routines that compute the coupling between the
89ae5db72SJed Brown       seperate components (DMs) in a DMto build the correct matrix nonzero structure.
947c6ae99SBarry Smith 
1047c6ae99SBarry Smith 
1147c6ae99SBarry Smith     Logically Collective on MPI_Comm
1247c6ae99SBarry Smith 
1347c6ae99SBarry Smith     Input Parameter:
1447c6ae99SBarry Smith +   dm - the composite object
1547c6ae99SBarry Smith -   formcouplelocations - routine to set the nonzero locations in the matrix
1647c6ae99SBarry Smith 
1747c6ae99SBarry Smith     Level: advanced
1847c6ae99SBarry Smith 
191b2093e4SBarry Smith     Notes: See DMSetApplicationContext() and DMGetApplicationContext() for how to get user information into
2047c6ae99SBarry Smith         this routine
2147c6ae99SBarry Smith 
2247c6ae99SBarry Smith @*/
237087cfbeSBarry Smith PetscErrorCode  DMCompositeSetCoupling(DM dm,PetscErrorCode (*FormCoupleLocations)(DM,Mat,PetscInt*,PetscInt*,PetscInt,PetscInt,PetscInt,PetscInt))
2447c6ae99SBarry Smith {
2547c6ae99SBarry Smith   DM_Composite *com = (DM_Composite*)dm->data;
2647c6ae99SBarry Smith 
2747c6ae99SBarry Smith   PetscFunctionBegin;
2847c6ae99SBarry Smith   com->FormCoupleLocations = FormCoupleLocations;
2947c6ae99SBarry Smith   PetscFunctionReturn(0);
3047c6ae99SBarry Smith }
3147c6ae99SBarry Smith 
3247c6ae99SBarry Smith #undef __FUNCT__
330c010503SBarry Smith #define __FUNCT__ "DMDestroy_Composite"
346bf464f9SBarry Smith PetscErrorCode  DMDestroy_Composite(DM dm)
3547c6ae99SBarry Smith {
3647c6ae99SBarry Smith   PetscErrorCode         ierr;
3747c6ae99SBarry Smith   struct DMCompositeLink *next, *prev;
3847c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
3947c6ae99SBarry Smith 
4047c6ae99SBarry Smith   PetscFunctionBegin;
4147c6ae99SBarry Smith   next = com->next;
4247c6ae99SBarry Smith   while (next) {
4347c6ae99SBarry Smith     prev = next;
4447c6ae99SBarry Smith     next = next->next;
45fcfd50ebSBarry Smith     ierr = DMDestroy(&prev->dm);CHKERRQ(ierr);
4647c6ae99SBarry Smith     ierr = PetscFree(prev->grstarts);CHKERRQ(ierr);
4747c6ae99SBarry Smith     ierr = PetscFree(prev);CHKERRQ(ierr);
4847c6ae99SBarry Smith   }
49435a35e8SMatthew G Knepley   /* This was originally freed in DMDestroy(), but that prevents reference counting of backend objects */
50435a35e8SMatthew G Knepley   ierr = PetscFree(com);CHKERRQ(ierr);
5147c6ae99SBarry Smith   PetscFunctionReturn(0);
5247c6ae99SBarry Smith }
5347c6ae99SBarry Smith 
5447c6ae99SBarry Smith #undef __FUNCT__
550c010503SBarry Smith #define __FUNCT__ "DMView_Composite"
567087cfbeSBarry Smith PetscErrorCode  DMView_Composite(DM dm,PetscViewer v)
5747c6ae99SBarry Smith {
5847c6ae99SBarry Smith   PetscErrorCode ierr;
5947c6ae99SBarry Smith   PetscBool      iascii;
6047c6ae99SBarry Smith   DM_Composite   *com = (DM_Composite*)dm->data;
6147c6ae99SBarry Smith 
6247c6ae99SBarry Smith   PetscFunctionBegin;
63251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)v,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
6447c6ae99SBarry Smith   if (iascii) {
6547c6ae99SBarry Smith     struct DMCompositeLink *lnk = com->next;
6647c6ae99SBarry Smith     PetscInt               i;
6747c6ae99SBarry Smith 
6847c6ae99SBarry Smith     ierr = PetscViewerASCIIPrintf(v,"DM (%s)\n",((PetscObject)dm)->prefix ? ((PetscObject)dm)->prefix : "no prefix");CHKERRQ(ierr);
699ae5db72SJed Brown     ierr = PetscViewerASCIIPrintf(v,"  contains %D DMs\n",com->nDM);CHKERRQ(ierr);
7047c6ae99SBarry Smith     ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr);
7147c6ae99SBarry Smith     for (i=0; lnk; lnk=lnk->next,i++) {
729ae5db72SJed Brown       ierr = PetscViewerASCIIPrintf(v,"Link %D: DM of type %s\n",i,((PetscObject)lnk->dm)->type_name);CHKERRQ(ierr);
7347c6ae99SBarry Smith       ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr);
7447c6ae99SBarry Smith       ierr = DMView(lnk->dm,v);CHKERRQ(ierr);
7547c6ae99SBarry Smith       ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr);
7647c6ae99SBarry Smith     }
7747c6ae99SBarry Smith     ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr);
7847c6ae99SBarry Smith   }
7947c6ae99SBarry Smith   PetscFunctionReturn(0);
8047c6ae99SBarry Smith }
8147c6ae99SBarry Smith 
8247c6ae99SBarry Smith /* --------------------------------------------------------------------------------------*/
8347c6ae99SBarry Smith #undef __FUNCT__
84d7bf68aeSBarry Smith #define __FUNCT__ "DMSetUp_Composite"
857087cfbeSBarry Smith PetscErrorCode  DMSetUp_Composite(DM dm)
8647c6ae99SBarry Smith {
8747c6ae99SBarry Smith   PetscErrorCode         ierr;
8847c6ae99SBarry Smith   PetscInt               nprev = 0;
8947c6ae99SBarry Smith   PetscMPIInt            rank,size;
9047c6ae99SBarry Smith   DM_Composite           *com  = (DM_Composite*)dm->data;
9147c6ae99SBarry Smith   struct DMCompositeLink *next = com->next;
9247c6ae99SBarry Smith   PetscLayout            map;
9347c6ae99SBarry Smith 
9447c6ae99SBarry Smith   PetscFunctionBegin;
95ce94432eSBarry Smith   if (com->setup) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_ARG_WRONGSTATE,"Packer has already been setup");
96ce94432eSBarry Smith   ierr = PetscLayoutCreate(PetscObjectComm((PetscObject)dm),&map);CHKERRQ(ierr);
9747c6ae99SBarry Smith   ierr = PetscLayoutSetLocalSize(map,com->n);CHKERRQ(ierr);
9847c6ae99SBarry Smith   ierr = PetscLayoutSetSize(map,PETSC_DETERMINE);CHKERRQ(ierr);
9947c6ae99SBarry Smith   ierr = PetscLayoutSetBlockSize(map,1);CHKERRQ(ierr);
10047c6ae99SBarry Smith   ierr = PetscLayoutSetUp(map);CHKERRQ(ierr);
10147c6ae99SBarry Smith   ierr = PetscLayoutGetSize(map,&com->N);CHKERRQ(ierr);
1020298fd71SBarry Smith   ierr = PetscLayoutGetRange(map,&com->rstart,NULL);CHKERRQ(ierr);
103fcfd50ebSBarry Smith   ierr = PetscLayoutDestroy(&map);CHKERRQ(ierr);
10447c6ae99SBarry Smith 
1059ae5db72SJed Brown   /* now set the rstart for each linked vector */
106ce94432eSBarry Smith   ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr);
107ce94432eSBarry Smith   ierr = MPI_Comm_size(PetscObjectComm((PetscObject)dm),&size);CHKERRQ(ierr);
10847c6ae99SBarry Smith   while (next) {
10947c6ae99SBarry Smith     next->rstart  = nprev;
11006ebdd98SJed Brown     nprev        += next->n;
11147c6ae99SBarry Smith     next->grstart = com->rstart + next->rstart;
11247c6ae99SBarry Smith     ierr          = PetscMalloc(size*sizeof(PetscInt),&next->grstarts);CHKERRQ(ierr);
113ce94432eSBarry Smith     ierr          = MPI_Allgather(&next->grstart,1,MPIU_INT,next->grstarts,1,MPIU_INT,PetscObjectComm((PetscObject)dm));CHKERRQ(ierr);
11447c6ae99SBarry Smith     next          = next->next;
11547c6ae99SBarry Smith   }
11647c6ae99SBarry Smith   com->setup = PETSC_TRUE;
11747c6ae99SBarry Smith   PetscFunctionReturn(0);
11847c6ae99SBarry Smith }
11947c6ae99SBarry Smith 
12047c6ae99SBarry Smith /* ----------------------------------------------------------------------------------*/
12147c6ae99SBarry Smith 
12247c6ae99SBarry Smith #undef __FUNCT__
12347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetNumberDM"
12473e31fe2SJed Brown /*@
12547c6ae99SBarry Smith     DMCompositeGetNumberDM - Get's the number of DM objects in the DMComposite
12647c6ae99SBarry Smith        representation.
12747c6ae99SBarry Smith 
12847c6ae99SBarry Smith     Not Collective
12947c6ae99SBarry Smith 
13047c6ae99SBarry Smith     Input Parameter:
13147c6ae99SBarry Smith .    dm - the packer object
13247c6ae99SBarry Smith 
13347c6ae99SBarry Smith     Output Parameter:
13447c6ae99SBarry Smith .     nDM - the number of DMs
13547c6ae99SBarry Smith 
13647c6ae99SBarry Smith     Level: beginner
13747c6ae99SBarry Smith 
13847c6ae99SBarry Smith @*/
1397087cfbeSBarry Smith PetscErrorCode  DMCompositeGetNumberDM(DM dm,PetscInt *nDM)
14047c6ae99SBarry Smith {
14147c6ae99SBarry Smith   DM_Composite *com = (DM_Composite*)dm->data;
1425fd66863SKarl Rupp 
14347c6ae99SBarry Smith   PetscFunctionBegin;
14447c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
14547c6ae99SBarry Smith   *nDM = com->nDM;
14647c6ae99SBarry Smith   PetscFunctionReturn(0);
14747c6ae99SBarry Smith }
14847c6ae99SBarry Smith 
14947c6ae99SBarry Smith 
15047c6ae99SBarry Smith #undef __FUNCT__
15147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess"
15247c6ae99SBarry Smith /*@C
15347c6ae99SBarry Smith     DMCompositeGetAccess - Allows one to access the individual packed vectors in their global
15447c6ae99SBarry Smith        representation.
15547c6ae99SBarry Smith 
15647c6ae99SBarry Smith     Collective on DMComposite
15747c6ae99SBarry Smith 
1589ae5db72SJed Brown     Input Parameters:
15947c6ae99SBarry Smith +    dm - the packer object
1609ae5db72SJed Brown -    gvec - the global vector
1619ae5db72SJed Brown 
1629ae5db72SJed Brown     Output Parameters:
1630298fd71SBarry Smith .    Vec* ... - the packed parallel vectors, NULL for those that are not needed
16447c6ae99SBarry Smith 
16547c6ae99SBarry Smith     Notes: Use DMCompositeRestoreAccess() to return the vectors when you no longer need them
16647c6ae99SBarry Smith 
167f73e5cebSJed Brown     Fortran Notes:
168f73e5cebSJed Brown 
169f73e5cebSJed Brown     Fortran callers must use numbered versions of this routine, e.g., DMCompositeGetAccess4(dm,gvec,vec1,vec2,vec3,vec4)
170f73e5cebSJed Brown     or use the alternative interface DMCompositeGetAccessArray().
171f73e5cebSJed Brown 
17247c6ae99SBarry Smith     Level: advanced
17347c6ae99SBarry Smith 
174f73e5cebSJed Brown .seealso: DMCompositeGetEntries(), DMCompositeScatter()
17547c6ae99SBarry Smith @*/
1767087cfbeSBarry Smith PetscErrorCode  DMCompositeGetAccess(DM dm,Vec gvec,...)
17747c6ae99SBarry Smith {
17847c6ae99SBarry Smith   va_list                Argp;
17947c6ae99SBarry Smith   PetscErrorCode         ierr;
18047c6ae99SBarry Smith   struct DMCompositeLink *next;
18147c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
18247c6ae99SBarry Smith 
18347c6ae99SBarry Smith   PetscFunctionBegin;
18447c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
18547c6ae99SBarry Smith   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
18647c6ae99SBarry Smith   next = com->next;
18747c6ae99SBarry Smith   if (!com->setup) {
188d7bf68aeSBarry Smith     ierr = DMSetUp(dm);CHKERRQ(ierr);
18947c6ae99SBarry Smith   }
19047c6ae99SBarry Smith 
19147c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
19247c6ae99SBarry Smith   va_start(Argp,gvec);
19347c6ae99SBarry Smith   while (next) {
19447c6ae99SBarry Smith     Vec *vec;
19547c6ae99SBarry Smith     vec = va_arg(Argp, Vec*);
1969ae5db72SJed Brown     if (vec) {
1979ae5db72SJed Brown       PetscScalar *array;
1989ae5db72SJed Brown       ierr = DMGetGlobalVector(next->dm,vec);CHKERRQ(ierr);
1999ae5db72SJed Brown       ierr = VecGetArray(gvec,&array);CHKERRQ(ierr);
2009ae5db72SJed Brown       ierr = VecPlaceArray(*vec,array+next->rstart);CHKERRQ(ierr);
2019ae5db72SJed Brown       ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr);
20247c6ae99SBarry Smith     }
20347c6ae99SBarry Smith     next = next->next;
20447c6ae99SBarry Smith   }
20547c6ae99SBarry Smith   va_end(Argp);
20647c6ae99SBarry Smith   PetscFunctionReturn(0);
20747c6ae99SBarry Smith }
20847c6ae99SBarry Smith 
20947c6ae99SBarry Smith #undef __FUNCT__
210f73e5cebSJed Brown #define __FUNCT__ "DMCompositeGetAccessArray"
211f73e5cebSJed Brown /*@C
212f73e5cebSJed Brown     DMCompositeGetAccessArray - Allows one to access the individual packed vectors in their global
213f73e5cebSJed Brown        representation.
214f73e5cebSJed Brown 
215f73e5cebSJed Brown     Collective on DMComposite
216f73e5cebSJed Brown 
217f73e5cebSJed Brown     Input Parameters:
218f73e5cebSJed Brown +    dm - the packer object
219f73e5cebSJed Brown .    pvec - packed vector
220f73e5cebSJed Brown .    nwanted - number of vectors wanted
2210298fd71SBarry Smith -    wanted - sorted array of vectors wanted, or NULL to get all vectors
222f73e5cebSJed Brown 
223f73e5cebSJed Brown     Output Parameters:
224f73e5cebSJed Brown .    vecs - array of requested global vectors (must be allocated)
225f73e5cebSJed Brown 
226f73e5cebSJed Brown     Notes: Use DMCompositeRestoreAccessArray() to return the vectors when you no longer need them
227f73e5cebSJed Brown 
228f73e5cebSJed Brown     Level: advanced
229f73e5cebSJed Brown 
230f73e5cebSJed Brown .seealso: DMCompositeGetAccess(), DMCompositeGetEntries(), DMCompositeScatter(), DMCompositeGather()
231f73e5cebSJed Brown @*/
232f73e5cebSJed Brown PetscErrorCode  DMCompositeGetAccessArray(DM dm,Vec pvec,PetscInt nwanted,const PetscInt *wanted,Vec *vecs)
233f73e5cebSJed Brown {
234f73e5cebSJed Brown   PetscErrorCode         ierr;
235f73e5cebSJed Brown   struct DMCompositeLink *link;
236f73e5cebSJed Brown   PetscInt               i,wnum;
237f73e5cebSJed Brown   DM_Composite           *com = (DM_Composite*)dm->data;
238f73e5cebSJed Brown 
239f73e5cebSJed Brown   PetscFunctionBegin;
240f73e5cebSJed Brown   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
241f73e5cebSJed Brown   PetscValidHeaderSpecific(pvec,VEC_CLASSID,2);
242f73e5cebSJed Brown   if (!com->setup) {
243f73e5cebSJed Brown     ierr = DMSetUp(dm);CHKERRQ(ierr);
244f73e5cebSJed Brown   }
245f73e5cebSJed Brown 
246f73e5cebSJed Brown   for (i=0,wnum=0,link=com->next; link && wnum<nwanted; i++,link=link->next) {
247f73e5cebSJed Brown     if (!wanted || i == wanted[wnum]) {
248f73e5cebSJed Brown       PetscScalar *array;
249f73e5cebSJed Brown       Vec v;
250f73e5cebSJed Brown       ierr = DMGetGlobalVector(link->dm,&v);CHKERRQ(ierr);
251f73e5cebSJed Brown       ierr = VecGetArray(pvec,&array);CHKERRQ(ierr);
252f73e5cebSJed Brown       ierr = VecPlaceArray(v,array+link->rstart);CHKERRQ(ierr);
253f73e5cebSJed Brown       ierr = VecRestoreArray(pvec,&array);CHKERRQ(ierr);
254f73e5cebSJed Brown       vecs[wnum++] = v;
255f73e5cebSJed Brown     }
256f73e5cebSJed Brown   }
257f73e5cebSJed Brown   PetscFunctionReturn(0);
258f73e5cebSJed Brown }
259f73e5cebSJed Brown 
260f73e5cebSJed Brown #undef __FUNCT__
26147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess"
26247c6ae99SBarry Smith /*@C
263aa219208SBarry Smith     DMCompositeRestoreAccess - Returns the vectors obtained with DMCompositeGetAccess()
26447c6ae99SBarry Smith        representation.
26547c6ae99SBarry Smith 
26647c6ae99SBarry Smith     Collective on DMComposite
26747c6ae99SBarry Smith 
2689ae5db72SJed Brown     Input Parameters:
26947c6ae99SBarry Smith +    dm - the packer object
27047c6ae99SBarry Smith .    gvec - the global vector
2710298fd71SBarry Smith -    Vec* ... - the individual parallel vectors, NULL for those that are not needed
27247c6ae99SBarry Smith 
27347c6ae99SBarry Smith     Level: advanced
27447c6ae99SBarry Smith 
2759ae5db72SJed Brown .seealso  DMCompositeAddDM(), DMCreateGlobalVector(),
2766eb61c8cSJed Brown          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeScatter(),
277aa219208SBarry Smith          DMCompositeRestoreAccess(), DMCompositeGetAccess()
27847c6ae99SBarry Smith 
27947c6ae99SBarry Smith @*/
2807087cfbeSBarry Smith PetscErrorCode  DMCompositeRestoreAccess(DM dm,Vec gvec,...)
28147c6ae99SBarry Smith {
28247c6ae99SBarry Smith   va_list                Argp;
28347c6ae99SBarry Smith   PetscErrorCode         ierr;
28447c6ae99SBarry Smith   struct DMCompositeLink *next;
28547c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
28647c6ae99SBarry Smith 
28747c6ae99SBarry Smith   PetscFunctionBegin;
28847c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
28947c6ae99SBarry Smith   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
29047c6ae99SBarry Smith   next = com->next;
29147c6ae99SBarry Smith   if (!com->setup) {
292d7bf68aeSBarry Smith     ierr = DMSetUp(dm);CHKERRQ(ierr);
29347c6ae99SBarry Smith   }
29447c6ae99SBarry Smith 
29547c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
29647c6ae99SBarry Smith   va_start(Argp,gvec);
29747c6ae99SBarry Smith   while (next) {
29847c6ae99SBarry Smith     Vec *vec;
29947c6ae99SBarry Smith     vec = va_arg(Argp, Vec*);
3009ae5db72SJed Brown     if (vec) {
3019ae5db72SJed Brown       ierr = VecResetArray(*vec);CHKERRQ(ierr);
3029ae5db72SJed Brown       ierr = DMRestoreGlobalVector(next->dm,vec);CHKERRQ(ierr);
30347c6ae99SBarry Smith     }
30447c6ae99SBarry Smith     next = next->next;
30547c6ae99SBarry Smith   }
30647c6ae99SBarry Smith   va_end(Argp);
30747c6ae99SBarry Smith   PetscFunctionReturn(0);
30847c6ae99SBarry Smith }
30947c6ae99SBarry Smith 
31047c6ae99SBarry Smith #undef __FUNCT__
311f73e5cebSJed Brown #define __FUNCT__ "DMCompositeRestoreAccessArray"
312f73e5cebSJed Brown /*@C
313f73e5cebSJed Brown     DMCompositeRestoreAccessArray - Returns the vectors obtained with DMCompositeGetAccessArray()
314f73e5cebSJed Brown 
315f73e5cebSJed Brown     Collective on DMComposite
316f73e5cebSJed Brown 
317f73e5cebSJed Brown     Input Parameters:
318f73e5cebSJed Brown +    dm - the packer object
319f73e5cebSJed Brown .    pvec - packed vector
320f73e5cebSJed Brown .    nwanted - number of vectors wanted
3210298fd71SBarry Smith .    wanted - sorted array of vectors wanted, or NULL to get all vectors
322f73e5cebSJed Brown -    vecs - array of global vectors to return
323f73e5cebSJed Brown 
324f73e5cebSJed Brown     Level: advanced
325f73e5cebSJed Brown 
326f73e5cebSJed Brown .seealso: DMCompositeRestoreAccess(), DMCompositeRestoreEntries(), DMCompositeScatter(), DMCompositeGather()
327f73e5cebSJed Brown @*/
328f73e5cebSJed Brown PetscErrorCode  DMCompositeRestoreAccessArray(DM dm,Vec pvec,PetscInt nwanted,const PetscInt *wanted,Vec *vecs)
329f73e5cebSJed Brown {
330f73e5cebSJed Brown   PetscErrorCode         ierr;
331f73e5cebSJed Brown   struct DMCompositeLink *link;
332f73e5cebSJed Brown   PetscInt               i,wnum;
333f73e5cebSJed Brown   DM_Composite           *com = (DM_Composite*)dm->data;
334f73e5cebSJed Brown 
335f73e5cebSJed Brown   PetscFunctionBegin;
336f73e5cebSJed Brown   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
337f73e5cebSJed Brown   PetscValidHeaderSpecific(pvec,VEC_CLASSID,2);
338f73e5cebSJed Brown   if (!com->setup) {
339f73e5cebSJed Brown     ierr = DMSetUp(dm);CHKERRQ(ierr);
340f73e5cebSJed Brown   }
341f73e5cebSJed Brown 
342f73e5cebSJed Brown   for (i=0,wnum=0,link=com->next; link && wnum<nwanted; i++,link=link->next) {
343f73e5cebSJed Brown     if (!wanted || i == wanted[wnum]) {
344f73e5cebSJed Brown       ierr = VecResetArray(vecs[wnum]);CHKERRQ(ierr);
345f73e5cebSJed Brown       ierr = DMRestoreGlobalVector(link->dm,&vecs[wnum]);CHKERRQ(ierr);
346f73e5cebSJed Brown       wnum++;
347f73e5cebSJed Brown     }
348f73e5cebSJed Brown   }
349f73e5cebSJed Brown   PetscFunctionReturn(0);
350f73e5cebSJed Brown }
351f73e5cebSJed Brown 
352f73e5cebSJed Brown #undef __FUNCT__
35347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter"
35447c6ae99SBarry Smith /*@C
35547c6ae99SBarry Smith     DMCompositeScatter - Scatters from a global packed vector into its individual local vectors
35647c6ae99SBarry Smith 
35747c6ae99SBarry Smith     Collective on DMComposite
35847c6ae99SBarry Smith 
3599ae5db72SJed Brown     Input Parameters:
36047c6ae99SBarry Smith +    dm - the packer object
36147c6ae99SBarry Smith .    gvec - the global vector
3620298fd71SBarry Smith -    Vec ... - the individual sequential vectors, NULL for those that are not needed
36347c6ae99SBarry Smith 
36447c6ae99SBarry Smith     Level: advanced
36547c6ae99SBarry Smith 
3666f3c3dcfSJed Brown     Notes:
3676f3c3dcfSJed Brown     DMCompositeScatterArray() is a non-variadic alternative that is often more convenient for library callers and is
3686f3c3dcfSJed Brown     accessible from Fortran.
3696f3c3dcfSJed Brown 
3709ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(),
3716eb61c8cSJed Brown          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
37247c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries()
3736f3c3dcfSJed Brown          DMCompositeScatterArray()
37447c6ae99SBarry Smith 
37547c6ae99SBarry Smith @*/
3767087cfbeSBarry Smith PetscErrorCode  DMCompositeScatter(DM dm,Vec gvec,...)
37747c6ae99SBarry Smith {
37847c6ae99SBarry Smith   va_list                Argp;
37947c6ae99SBarry Smith   PetscErrorCode         ierr;
38047c6ae99SBarry Smith   struct DMCompositeLink *next;
3818fd8f222SJed Brown   PetscInt               cnt;
38247c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
38347c6ae99SBarry Smith 
38447c6ae99SBarry Smith   PetscFunctionBegin;
38547c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
38647c6ae99SBarry Smith   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
38747c6ae99SBarry Smith   if (!com->setup) {
388d7bf68aeSBarry Smith     ierr = DMSetUp(dm);CHKERRQ(ierr);
38947c6ae99SBarry Smith   }
39047c6ae99SBarry Smith 
39147c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
39247c6ae99SBarry Smith   va_start(Argp,gvec);
3938fd8f222SJed Brown   for (cnt=3,next=com->next; next; cnt++,next=next->next) {
3949ae5db72SJed Brown     Vec local;
3959ae5db72SJed Brown     local = va_arg(Argp, Vec);
3969ae5db72SJed Brown     if (local) {
3979ae5db72SJed Brown       Vec         global;
39847c6ae99SBarry Smith       PetscScalar *array;
3999ae5db72SJed Brown       PetscValidHeaderSpecific(local,VEC_CLASSID,cnt);
4009ae5db72SJed Brown       ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr);
4019ae5db72SJed Brown       ierr = VecGetArray(gvec,&array);CHKERRQ(ierr);
4029ae5db72SJed Brown       ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr);
4039ae5db72SJed Brown       ierr = DMGlobalToLocalBegin(next->dm,global,INSERT_VALUES,local);CHKERRQ(ierr);
4049ae5db72SJed Brown       ierr = DMGlobalToLocalEnd(next->dm,global,INSERT_VALUES,local);CHKERRQ(ierr);
4059ae5db72SJed Brown       ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr);
4069ae5db72SJed Brown       ierr = VecResetArray(global);CHKERRQ(ierr);
4079ae5db72SJed Brown       ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr);
40847c6ae99SBarry Smith     }
40947c6ae99SBarry Smith   }
41047c6ae99SBarry Smith   va_end(Argp);
41147c6ae99SBarry Smith   PetscFunctionReturn(0);
41247c6ae99SBarry Smith }
41347c6ae99SBarry Smith 
41447c6ae99SBarry Smith #undef __FUNCT__
4156f3c3dcfSJed Brown #define __FUNCT__ "DMCompositeScatterArray"
4166f3c3dcfSJed Brown /*@
4176f3c3dcfSJed Brown     DMCompositeScatterArray - Scatters from a global packed vector into its individual local vectors
4186f3c3dcfSJed Brown 
4196f3c3dcfSJed Brown     Collective on DMComposite
4206f3c3dcfSJed Brown 
4216f3c3dcfSJed Brown     Input Parameters:
4226f3c3dcfSJed Brown +    dm - the packer object
4236f3c3dcfSJed Brown .    gvec - the global vector
4246f3c3dcfSJed Brown .    lvecs - array of local vectors, NULL for any that are not needed
4256f3c3dcfSJed Brown 
4266f3c3dcfSJed Brown     Level: advanced
4276f3c3dcfSJed Brown 
4286f3c3dcfSJed Brown     Note:
4296f3c3dcfSJed Brown     This is a non-variadic alternative to DMCompositeScatterArray()
4306f3c3dcfSJed Brown 
4316f3c3dcfSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector()
4326f3c3dcfSJed Brown          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
4336f3c3dcfSJed Brown          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries()
4346f3c3dcfSJed Brown 
4356f3c3dcfSJed Brown @*/
4366f3c3dcfSJed Brown PetscErrorCode  DMCompositeScatterArray(DM dm,Vec gvec,Vec *lvecs)
4376f3c3dcfSJed Brown {
4386f3c3dcfSJed Brown   PetscErrorCode         ierr;
4396f3c3dcfSJed Brown   struct DMCompositeLink *next;
4406f3c3dcfSJed Brown   PetscInt               i;
4416f3c3dcfSJed Brown   DM_Composite           *com = (DM_Composite*)dm->data;
4426f3c3dcfSJed Brown 
4436f3c3dcfSJed Brown   PetscFunctionBegin;
4446f3c3dcfSJed Brown   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
4456f3c3dcfSJed Brown   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
4466f3c3dcfSJed Brown   if (!com->setup) {
4476f3c3dcfSJed Brown     ierr = DMSetUp(dm);CHKERRQ(ierr);
4486f3c3dcfSJed Brown   }
4496f3c3dcfSJed Brown 
4506f3c3dcfSJed Brown   /* loop over packed objects, handling one at at time */
4516f3c3dcfSJed Brown   for (i=0,next=com->next; next; next=next->next,i++) {
4526f3c3dcfSJed Brown     if (lvecs[i]) {
4536f3c3dcfSJed Brown       Vec         global;
4546f3c3dcfSJed Brown       PetscScalar *array;
4556f3c3dcfSJed Brown       PetscValidHeaderSpecific(lvecs[i],VEC_CLASSID,3);
4566f3c3dcfSJed Brown       ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr);
4576f3c3dcfSJed Brown       ierr = VecGetArray(gvec,&array);CHKERRQ(ierr);
4586f3c3dcfSJed Brown       ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr);
4596f3c3dcfSJed Brown       ierr = DMGlobalToLocalBegin(next->dm,global,INSERT_VALUES,lvecs[i]);CHKERRQ(ierr);
4606f3c3dcfSJed Brown       ierr = DMGlobalToLocalEnd(next->dm,global,INSERT_VALUES,lvecs[i]);CHKERRQ(ierr);
4616f3c3dcfSJed Brown       ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr);
4626f3c3dcfSJed Brown       ierr = VecResetArray(global);CHKERRQ(ierr);
4636f3c3dcfSJed Brown       ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr);
4646f3c3dcfSJed Brown     }
4656f3c3dcfSJed Brown   }
4666f3c3dcfSJed Brown   PetscFunctionReturn(0);
4676f3c3dcfSJed Brown }
4686f3c3dcfSJed Brown 
4696f3c3dcfSJed Brown #undef __FUNCT__
47047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather"
47147c6ae99SBarry Smith /*@C
47247c6ae99SBarry Smith     DMCompositeGather - Gathers into a global packed vector from its individual local vectors
47347c6ae99SBarry Smith 
47447c6ae99SBarry Smith     Collective on DMComposite
47547c6ae99SBarry Smith 
47647c6ae99SBarry Smith     Input Parameter:
47747c6ae99SBarry Smith +    dm - the packer object
47847c6ae99SBarry Smith .    gvec - the global vector
4790298fd71SBarry Smith -    Vec ... - the individual sequential vectors, NULL for any that are not needed
48047c6ae99SBarry Smith 
48147c6ae99SBarry Smith     Level: advanced
48247c6ae99SBarry Smith 
4839ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(),
4846eb61c8cSJed Brown          DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
48547c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries()
48647c6ae99SBarry Smith 
48747c6ae99SBarry Smith @*/
4887087cfbeSBarry Smith PetscErrorCode  DMCompositeGather(DM dm,Vec gvec,InsertMode imode,...)
48947c6ae99SBarry Smith {
49047c6ae99SBarry Smith   va_list                Argp;
49147c6ae99SBarry Smith   PetscErrorCode         ierr;
49247c6ae99SBarry Smith   struct DMCompositeLink *next;
49347c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
4948fd8f222SJed Brown   PetscInt               cnt;
49547c6ae99SBarry Smith 
49647c6ae99SBarry Smith   PetscFunctionBegin;
49747c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
49847c6ae99SBarry Smith   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
49947c6ae99SBarry Smith   if (!com->setup) {
500d7bf68aeSBarry Smith     ierr = DMSetUp(dm);CHKERRQ(ierr);
50147c6ae99SBarry Smith   }
50247c6ae99SBarry Smith 
50347c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
504df0c820aSJed Brown   va_start(Argp,imode);
5058fd8f222SJed Brown   for (cnt=3,next=com->next; next; cnt++,next=next->next) {
5069ae5db72SJed Brown     Vec local;
5079ae5db72SJed Brown     local = va_arg(Argp, Vec);
5089ae5db72SJed Brown     if (local) {
50947c6ae99SBarry Smith       PetscScalar *array;
5109ae5db72SJed Brown       Vec         global;
5119ae5db72SJed Brown       PetscValidHeaderSpecific(local,VEC_CLASSID,cnt);
5129ae5db72SJed Brown       ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr);
5139ae5db72SJed Brown       ierr = VecGetArray(gvec,&array);CHKERRQ(ierr);
5149ae5db72SJed Brown       ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr);
5159ae5db72SJed Brown       ierr = DMLocalToGlobalBegin(next->dm,local,imode,global);CHKERRQ(ierr);
5169ae5db72SJed Brown       ierr = DMLocalToGlobalEnd(next->dm,local,imode,global);CHKERRQ(ierr);
5179ae5db72SJed Brown       ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr);
5189ae5db72SJed Brown       ierr = VecResetArray(global);CHKERRQ(ierr);
5199ae5db72SJed Brown       ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr);
52047c6ae99SBarry Smith     }
52147c6ae99SBarry Smith   }
52247c6ae99SBarry Smith   va_end(Argp);
52347c6ae99SBarry Smith   PetscFunctionReturn(0);
52447c6ae99SBarry Smith }
52547c6ae99SBarry Smith 
52647c6ae99SBarry Smith #undef __FUNCT__
5276f3c3dcfSJed Brown #define __FUNCT__ "DMCompositeGatherArray"
5286f3c3dcfSJed Brown /*@
5296f3c3dcfSJed Brown     DMCompositeGatherArray - Gathers into a global packed vector from its individual local vectors
5306f3c3dcfSJed Brown 
5316f3c3dcfSJed Brown     Collective on DMComposite
5326f3c3dcfSJed Brown 
5336f3c3dcfSJed Brown     Input Parameter:
5346f3c3dcfSJed Brown +    dm - the packer object
5356f3c3dcfSJed Brown .    gvec - the global vector
5366f3c3dcfSJed Brown -    lvecs - the individual sequential vectors, NULL for any that are not needed
5376f3c3dcfSJed Brown 
5386f3c3dcfSJed Brown     Level: advanced
5396f3c3dcfSJed Brown 
5406f3c3dcfSJed Brown     Notes:
5416f3c3dcfSJed Brown     This is a non-variadic alternative to DMCompositeGather().
5426f3c3dcfSJed Brown 
5436f3c3dcfSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(),
5446f3c3dcfSJed Brown          DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
5456f3c3dcfSJed Brown          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries(),
5466f3c3dcfSJed Brown @*/
5476f3c3dcfSJed Brown PetscErrorCode  DMCompositeGatherArray(DM dm,Vec gvec,InsertMode imode,Vec *lvecs)
5486f3c3dcfSJed Brown {
5496f3c3dcfSJed Brown   PetscErrorCode         ierr;
5506f3c3dcfSJed Brown   struct DMCompositeLink *next;
5516f3c3dcfSJed Brown   DM_Composite           *com = (DM_Composite*)dm->data;
5526f3c3dcfSJed Brown   PetscInt               i;
5536f3c3dcfSJed Brown 
5546f3c3dcfSJed Brown   PetscFunctionBegin;
5556f3c3dcfSJed Brown   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
5566f3c3dcfSJed Brown   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
5576f3c3dcfSJed Brown   if (!com->setup) {
5586f3c3dcfSJed Brown     ierr = DMSetUp(dm);CHKERRQ(ierr);
5596f3c3dcfSJed Brown   }
5606f3c3dcfSJed Brown 
5616f3c3dcfSJed Brown   /* loop over packed objects, handling one at at time */
5626f3c3dcfSJed Brown   for (next=com->next,i=0; next; next=next->next,i++) {
5636f3c3dcfSJed Brown     if (lvecs[i]) {
5646f3c3dcfSJed Brown       PetscScalar *array;
5656f3c3dcfSJed Brown       Vec         global;
5666f3c3dcfSJed Brown       PetscValidHeaderSpecific(lvecs[i],VEC_CLASSID,3);
5676f3c3dcfSJed Brown       ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr);
5686f3c3dcfSJed Brown       ierr = VecGetArray(gvec,&array);CHKERRQ(ierr);
5696f3c3dcfSJed Brown       ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr);
5706f3c3dcfSJed Brown       ierr = DMLocalToGlobalBegin(next->dm,lvecs[i],imode,global);CHKERRQ(ierr);
5716f3c3dcfSJed Brown       ierr = DMLocalToGlobalEnd(next->dm,lvecs[i],imode,global);CHKERRQ(ierr);
5726f3c3dcfSJed Brown       ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr);
5736f3c3dcfSJed Brown       ierr = VecResetArray(global);CHKERRQ(ierr);
5746f3c3dcfSJed Brown       ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr);
5756f3c3dcfSJed Brown     }
5766f3c3dcfSJed Brown   }
5776f3c3dcfSJed Brown   PetscFunctionReturn(0);
5786f3c3dcfSJed Brown }
5796f3c3dcfSJed Brown 
5806f3c3dcfSJed Brown #undef __FUNCT__
58147c6ae99SBarry Smith #define __FUNCT__ "DMCompositeAddDM"
58247c6ae99SBarry Smith /*@C
583aa219208SBarry Smith     DMCompositeAddDM - adds a DM  vector to a DMComposite
58447c6ae99SBarry Smith 
58547c6ae99SBarry Smith     Collective on DMComposite
58647c6ae99SBarry Smith 
58747c6ae99SBarry Smith     Input Parameter:
58847c6ae99SBarry Smith +    dm - the packer object
58947c6ae99SBarry Smith -    dm - the DM object, if the DM is a da you will need to caste it with a (DM)
59047c6ae99SBarry Smith 
59147c6ae99SBarry Smith     Level: advanced
59247c6ae99SBarry Smith 
5930c010503SBarry Smith .seealso DMDestroy(), DMCompositeGather(), DMCompositeAddDM(), DMCreateGlobalVector(),
5946eb61c8cSJed Brown          DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
59547c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries()
59647c6ae99SBarry Smith 
59747c6ae99SBarry Smith @*/
5987087cfbeSBarry Smith PetscErrorCode  DMCompositeAddDM(DM dmc,DM dm)
59947c6ae99SBarry Smith {
60047c6ae99SBarry Smith   PetscErrorCode         ierr;
60106ebdd98SJed Brown   PetscInt               n,nlocal;
60247c6ae99SBarry Smith   struct DMCompositeLink *mine,*next;
60306ebdd98SJed Brown   Vec                    global,local;
60447c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dmc->data;
60547c6ae99SBarry Smith 
60647c6ae99SBarry Smith   PetscFunctionBegin;
60747c6ae99SBarry Smith   PetscValidHeaderSpecific(dmc,DM_CLASSID,1);
60847c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,2);
60947c6ae99SBarry Smith   next = com->next;
610ce94432eSBarry Smith   if (com->setup) SETERRQ(PetscObjectComm((PetscObject)dmc),PETSC_ERR_ARG_WRONGSTATE,"Cannot add a DM once you have used the DMComposite");
61147c6ae99SBarry Smith 
61247c6ae99SBarry Smith   /* create new link */
61347c6ae99SBarry Smith   ierr = PetscNew(struct DMCompositeLink,&mine);CHKERRQ(ierr);
61447c6ae99SBarry Smith   ierr = PetscObjectReference((PetscObject)dm);CHKERRQ(ierr);
61547c6ae99SBarry Smith   ierr = DMGetGlobalVector(dm,&global);CHKERRQ(ierr);
61647c6ae99SBarry Smith   ierr = VecGetLocalSize(global,&n);CHKERRQ(ierr);
61747c6ae99SBarry Smith   ierr = DMRestoreGlobalVector(dm,&global);CHKERRQ(ierr);
61806ebdd98SJed Brown   ierr = DMGetLocalVector(dm,&local);CHKERRQ(ierr);
61906ebdd98SJed Brown   ierr = VecGetSize(local,&nlocal);CHKERRQ(ierr);
62006ebdd98SJed Brown   ierr = DMRestoreLocalVector(dm,&local);CHKERRQ(ierr);
6218865f1eaSKarl Rupp 
62247c6ae99SBarry Smith   mine->n      = n;
62306ebdd98SJed Brown   mine->nlocal = nlocal;
62447c6ae99SBarry Smith   mine->dm     = dm;
6250298fd71SBarry Smith   mine->next   = NULL;
62647c6ae99SBarry Smith   com->n      += n;
62747c6ae99SBarry Smith 
62847c6ae99SBarry Smith   /* add to end of list */
6298865f1eaSKarl Rupp   if (!next) com->next = mine;
6308865f1eaSKarl Rupp   else {
63147c6ae99SBarry Smith     while (next->next) next = next->next;
63247c6ae99SBarry Smith     next->next = mine;
63347c6ae99SBarry Smith   }
63447c6ae99SBarry Smith   com->nDM++;
63547c6ae99SBarry Smith   com->nmine++;
63647c6ae99SBarry Smith   PetscFunctionReturn(0);
63747c6ae99SBarry Smith }
63847c6ae99SBarry Smith 
6399804daf3SBarry Smith #include <petscdraw.h>
64026887b52SJed Brown PETSC_EXTERN PetscErrorCode  VecView_MPI(Vec,PetscViewer);
64147c6ae99SBarry Smith #undef __FUNCT__
64247c6ae99SBarry Smith #define __FUNCT__ "VecView_DMComposite"
6437087cfbeSBarry Smith PetscErrorCode  VecView_DMComposite(Vec gvec,PetscViewer viewer)
64447c6ae99SBarry Smith {
64547c6ae99SBarry Smith   DM                     dm;
64647c6ae99SBarry Smith   PetscErrorCode         ierr;
64747c6ae99SBarry Smith   struct DMCompositeLink *next;
64847c6ae99SBarry Smith   PetscBool              isdraw;
649cef07954SSatish Balay   DM_Composite           *com;
65047c6ae99SBarry Smith 
65147c6ae99SBarry Smith   PetscFunctionBegin;
652c688c046SMatthew G Knepley   ierr = VecGetDM(gvec, &dm);CHKERRQ(ierr);
653ce94432eSBarry Smith   if (!dm) SETERRQ(PetscObjectComm((PetscObject)gvec),PETSC_ERR_ARG_WRONG,"Vector not generated from a DMComposite");
65447c6ae99SBarry Smith   com  = (DM_Composite*)dm->data;
65547c6ae99SBarry Smith   next = com->next;
65647c6ae99SBarry Smith 
657251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr);
65847c6ae99SBarry Smith   if (!isdraw) {
65947c6ae99SBarry Smith     /* do I really want to call this? */
66047c6ae99SBarry Smith     ierr = VecView_MPI(gvec,viewer);CHKERRQ(ierr);
66147c6ae99SBarry Smith   } else {
66247c6ae99SBarry Smith     PetscInt cnt = 0;
66347c6ae99SBarry Smith 
66447c6ae99SBarry Smith     /* loop over packed objects, handling one at at time */
66547c6ae99SBarry Smith     while (next) {
66647c6ae99SBarry Smith       Vec         vec;
6679ae5db72SJed Brown       PetscScalar *array;
66847c6ae99SBarry Smith       PetscInt    bs;
66947c6ae99SBarry Smith 
6709ae5db72SJed Brown       /* Should use VecGetSubVector() eventually, but would need to forward the DM for that to work */
6719ae5db72SJed Brown       ierr = DMGetGlobalVector(next->dm,&vec);CHKERRQ(ierr);
6729ae5db72SJed Brown       ierr = VecGetArray(gvec,&array);CHKERRQ(ierr);
6739ae5db72SJed Brown       ierr = VecPlaceArray(vec,array+next->rstart);CHKERRQ(ierr);
6749ae5db72SJed Brown       ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr);
67547c6ae99SBarry Smith       ierr = VecView(vec,viewer);CHKERRQ(ierr);
67647c6ae99SBarry Smith       ierr = VecGetBlockSize(vec,&bs);CHKERRQ(ierr);
6779ae5db72SJed Brown       ierr = VecResetArray(vec);CHKERRQ(ierr);
6789ae5db72SJed Brown       ierr = DMRestoreGlobalVector(next->dm,&vec);CHKERRQ(ierr);
67947c6ae99SBarry Smith       ierr = PetscViewerDrawBaseAdd(viewer,bs);CHKERRQ(ierr);
68047c6ae99SBarry Smith       cnt += bs;
68147c6ae99SBarry Smith       next = next->next;
68247c6ae99SBarry Smith     }
68347c6ae99SBarry Smith     ierr = PetscViewerDrawBaseAdd(viewer,-cnt);CHKERRQ(ierr);
68447c6ae99SBarry Smith   }
68547c6ae99SBarry Smith   PetscFunctionReturn(0);
68647c6ae99SBarry Smith }
68747c6ae99SBarry Smith 
68847c6ae99SBarry Smith #undef __FUNCT__
6890c010503SBarry Smith #define __FUNCT__ "DMCreateGlobalVector_Composite"
6907087cfbeSBarry Smith PetscErrorCode  DMCreateGlobalVector_Composite(DM dm,Vec *gvec)
69147c6ae99SBarry Smith {
69247c6ae99SBarry Smith   PetscErrorCode ierr;
69347c6ae99SBarry Smith   DM_Composite   *com = (DM_Composite*)dm->data;
69447c6ae99SBarry Smith 
69547c6ae99SBarry Smith   PetscFunctionBegin;
69647c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
697d7bf68aeSBarry Smith   ierr = DMSetUp(dm);CHKERRQ(ierr);
698ce94432eSBarry Smith   ierr = VecCreateMPI(PetscObjectComm((PetscObject)dm),com->n,com->N,gvec);CHKERRQ(ierr);
699c688c046SMatthew G Knepley   ierr = VecSetDM(*gvec, dm);CHKERRQ(ierr);
70047c6ae99SBarry Smith   ierr = VecSetOperation(*gvec,VECOP_VIEW,(void (*)(void))VecView_DMComposite);CHKERRQ(ierr);
70147c6ae99SBarry Smith   PetscFunctionReturn(0);
70247c6ae99SBarry Smith }
70347c6ae99SBarry Smith 
70447c6ae99SBarry Smith #undef __FUNCT__
7050c010503SBarry Smith #define __FUNCT__ "DMCreateLocalVector_Composite"
7067087cfbeSBarry Smith PetscErrorCode  DMCreateLocalVector_Composite(DM dm,Vec *lvec)
70747c6ae99SBarry Smith {
70847c6ae99SBarry Smith   PetscErrorCode ierr;
70947c6ae99SBarry Smith   DM_Composite   *com = (DM_Composite*)dm->data;
71047c6ae99SBarry Smith 
71147c6ae99SBarry Smith   PetscFunctionBegin;
71247c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
71347c6ae99SBarry Smith   if (!com->setup) {
714d7bf68aeSBarry Smith     ierr = DMSetUp(dm);CHKERRQ(ierr);
71547c6ae99SBarry Smith   }
716ce94432eSBarry Smith   ierr = VecCreateSeq(PetscObjectComm((PetscObject)dm),com->nghost,lvec);CHKERRQ(ierr);
717c688c046SMatthew G Knepley   ierr = VecSetDM(*lvec, dm);CHKERRQ(ierr);
71847c6ae99SBarry Smith   PetscFunctionReturn(0);
71947c6ae99SBarry Smith }
72047c6ae99SBarry Smith 
72147c6ae99SBarry Smith #undef __FUNCT__
7226eb61c8cSJed Brown #define __FUNCT__ "DMCompositeGetISLocalToGlobalMappings"
72347c6ae99SBarry Smith /*@C
7249ae5db72SJed Brown     DMCompositeGetISLocalToGlobalMappings - gets an ISLocalToGlobalMapping for each DM in the DMComposite, maps to the composite global space
72547c6ae99SBarry Smith 
72606ebdd98SJed Brown     Collective on DM
72747c6ae99SBarry Smith 
72847c6ae99SBarry Smith     Input Parameter:
72947c6ae99SBarry Smith .    dm - the packer object
73047c6ae99SBarry Smith 
73147c6ae99SBarry Smith     Output Parameters:
7329ae5db72SJed Brown .    ltogs - the individual mappings for each packed vector. Note that this includes
7339ae5db72SJed Brown            all the ghost points that individual ghosted DMDA's may have.
73447c6ae99SBarry Smith 
73547c6ae99SBarry Smith     Level: advanced
73647c6ae99SBarry Smith 
73747c6ae99SBarry Smith     Notes:
7386eb61c8cSJed Brown        Each entry of ltogs should be destroyed with ISLocalToGlobalMappingDestroy(), the ltogs array should be freed with PetscFree().
73947c6ae99SBarry Smith 
7409ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(),
74147c6ae99SBarry Smith          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(),
74247c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries()
74347c6ae99SBarry Smith 
74447c6ae99SBarry Smith @*/
7457087cfbeSBarry Smith PetscErrorCode  DMCompositeGetISLocalToGlobalMappings(DM dm,ISLocalToGlobalMapping **ltogs)
74647c6ae99SBarry Smith {
74747c6ae99SBarry Smith   PetscErrorCode         ierr;
74847c6ae99SBarry Smith   PetscInt               i,*idx,n,cnt;
74947c6ae99SBarry Smith   struct DMCompositeLink *next;
75047c6ae99SBarry Smith   PetscMPIInt            rank;
75147c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
75247c6ae99SBarry Smith 
75347c6ae99SBarry Smith   PetscFunctionBegin;
75447c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
755728e99d6SJed Brown   ierr = DMSetUp(dm);CHKERRQ(ierr);
7569ae5db72SJed Brown   ierr = PetscMalloc((com->nDM)*sizeof(ISLocalToGlobalMapping),ltogs);CHKERRQ(ierr);
75747c6ae99SBarry Smith   next = com->next;
758ce94432eSBarry Smith   ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr);
75947c6ae99SBarry Smith 
76047c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
76147c6ae99SBarry Smith   cnt = 0;
76247c6ae99SBarry Smith   while (next) {
7636eb61c8cSJed Brown     ISLocalToGlobalMapping ltog;
7646eb61c8cSJed Brown     PetscMPIInt            size;
76586994e45SJed Brown     const PetscInt         *suboff,*indices;
7666eb61c8cSJed Brown     Vec                    global;
76747c6ae99SBarry Smith 
7686eb61c8cSJed Brown     /* Get sub-DM global indices for each local dof */
7691411c6eeSJed Brown     ierr = DMGetLocalToGlobalMapping(next->dm,&ltog);CHKERRQ(ierr);
7706eb61c8cSJed Brown     ierr = ISLocalToGlobalMappingGetSize(ltog,&n);CHKERRQ(ierr);
77186994e45SJed Brown     ierr = ISLocalToGlobalMappingGetIndices(ltog,&indices);CHKERRQ(ierr);
77247c6ae99SBarry Smith     ierr = PetscMalloc(n*sizeof(PetscInt),&idx);CHKERRQ(ierr);
77347c6ae99SBarry Smith 
7746eb61c8cSJed Brown     /* Get the offsets for the sub-DM global vector */
7756eb61c8cSJed Brown     ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr);
7766eb61c8cSJed Brown     ierr = VecGetOwnershipRanges(global,&suboff);CHKERRQ(ierr);
777ce94432eSBarry Smith     ierr = MPI_Comm_size(PetscObjectComm((PetscObject)global),&size);CHKERRQ(ierr);
7786eb61c8cSJed Brown 
7796eb61c8cSJed Brown     /* Shift the sub-DM definition of the global space to the composite global space */
7806eb61c8cSJed Brown     for (i=0; i<n; i++) {
78186994e45SJed Brown       PetscInt subi = indices[i],lo = 0,hi = size,t;
7826eb61c8cSJed Brown       /* Binary search to find which rank owns subi */
7836eb61c8cSJed Brown       while (hi-lo > 1) {
7846eb61c8cSJed Brown         t = lo + (hi-lo)/2;
7856eb61c8cSJed Brown         if (suboff[t] > subi) hi = t;
7866eb61c8cSJed Brown         else                  lo = t;
7876eb61c8cSJed Brown       }
7886eb61c8cSJed Brown       idx[i] = subi - suboff[lo] + next->grstarts[lo];
7896eb61c8cSJed Brown     }
79086994e45SJed Brown     ierr = ISLocalToGlobalMappingRestoreIndices(ltog,&indices);CHKERRQ(ierr);
791ce94432eSBarry Smith     ierr = ISLocalToGlobalMappingCreate(PetscObjectComm((PetscObject)dm),n,idx,PETSC_OWN_POINTER,&(*ltogs)[cnt]);CHKERRQ(ierr);
7926eb61c8cSJed Brown     ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr);
79347c6ae99SBarry Smith     next = next->next;
79447c6ae99SBarry Smith     cnt++;
79547c6ae99SBarry Smith   }
79647c6ae99SBarry Smith   PetscFunctionReturn(0);
79747c6ae99SBarry Smith }
79847c6ae99SBarry Smith 
79947c6ae99SBarry Smith #undef __FUNCT__
80087c85e80SJed Brown #define __FUNCT__ "DMCompositeGetLocalISs"
80187c85e80SJed Brown /*@C
8029ae5db72SJed Brown    DMCompositeGetLocalISs - Gets index sets for each component of a composite local vector
80387c85e80SJed Brown 
80487c85e80SJed Brown    Not Collective
80587c85e80SJed Brown 
80687c85e80SJed Brown    Input Arguments:
80787c85e80SJed Brown . dm - composite DM
80887c85e80SJed Brown 
80987c85e80SJed Brown    Output Arguments:
81087c85e80SJed Brown . is - array of serial index sets for each each component of the DMComposite
81187c85e80SJed Brown 
81287c85e80SJed Brown    Level: intermediate
81387c85e80SJed Brown 
81487c85e80SJed Brown    Notes:
81587c85e80SJed Brown    At present, a composite local vector does not normally exist.  This function is used to provide index sets for
81687c85e80SJed Brown    MatGetLocalSubMatrix().  In the future, the scatters for each entry in the DMComposite may be be merged into a single
8179ae5db72SJed Brown    scatter to a composite local vector.  The user should not typically need to know which is being done.
81887c85e80SJed Brown 
81987c85e80SJed Brown    To get the composite global indices at all local points (including ghosts), use DMCompositeGetISLocalToGlobalMappings().
82087c85e80SJed Brown 
82187c85e80SJed Brown    To get index sets for pieces of the composite global vector, use DMCompositeGetGlobalISs().
82287c85e80SJed Brown 
82387c85e80SJed Brown    Each returned IS should be destroyed with ISDestroy(), the array should be freed with PetscFree().
82487c85e80SJed Brown 
82587c85e80SJed Brown .seealso: DMCompositeGetGlobalISs(), DMCompositeGetISLocalToGlobalMappings(), MatGetLocalSubMatrix(), MatCreateLocalRef()
82687c85e80SJed Brown @*/
8277087cfbeSBarry Smith PetscErrorCode  DMCompositeGetLocalISs(DM dm,IS **is)
82887c85e80SJed Brown {
82987c85e80SJed Brown   PetscErrorCode         ierr;
83087c85e80SJed Brown   DM_Composite           *com = (DM_Composite*)dm->data;
83187c85e80SJed Brown   struct DMCompositeLink *link;
83287c85e80SJed Brown   PetscInt               cnt,start;
83387c85e80SJed Brown 
83487c85e80SJed Brown   PetscFunctionBegin;
83587c85e80SJed Brown   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
83687c85e80SJed Brown   PetscValidPointer(is,2);
83787c85e80SJed Brown   ierr = PetscMalloc(com->nmine*sizeof(IS),is);CHKERRQ(ierr);
83806ebdd98SJed Brown   for (cnt=0,start=0,link=com->next; link; start+=link->nlocal,cnt++,link=link->next) {
839520db06cSJed Brown     PetscInt bs;
8409ae5db72SJed Brown     ierr = ISCreateStride(PETSC_COMM_SELF,link->nlocal,start,1,&(*is)[cnt]);CHKERRQ(ierr);
8411411c6eeSJed Brown     ierr = DMGetBlockSize(link->dm,&bs);CHKERRQ(ierr);
842520db06cSJed Brown     ierr = ISSetBlockSize((*is)[cnt],bs);CHKERRQ(ierr);
843520db06cSJed Brown   }
84487c85e80SJed Brown   PetscFunctionReturn(0);
84587c85e80SJed Brown }
84687c85e80SJed Brown 
84787c85e80SJed Brown #undef __FUNCT__
84847c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetGlobalISs"
84947c6ae99SBarry Smith /*@C
85047c6ae99SBarry Smith     DMCompositeGetGlobalISs - Gets the index sets for each composed object
85147c6ae99SBarry Smith 
85247c6ae99SBarry Smith     Collective on DMComposite
85347c6ae99SBarry Smith 
85447c6ae99SBarry Smith     Input Parameter:
85547c6ae99SBarry Smith .    dm - the packer object
85647c6ae99SBarry Smith 
85747c6ae99SBarry Smith     Output Parameters:
85847c6ae99SBarry Smith .    is - the array of index sets
85947c6ae99SBarry Smith 
86047c6ae99SBarry Smith     Level: advanced
86147c6ae99SBarry Smith 
86247c6ae99SBarry Smith     Notes:
86347c6ae99SBarry Smith        The is entries should be destroyed with ISDestroy(), the is array should be freed with PetscFree()
86447c6ae99SBarry Smith 
86547c6ae99SBarry Smith        These could be used to extract a subset of vector entries for a "multi-physics" preconditioner
86647c6ae99SBarry Smith 
8676eb61c8cSJed Brown        Use DMCompositeGetLocalISs() for index sets in the packed local numbering, and
8686eb61c8cSJed Brown        DMCompositeGetISLocalToGlobalMappings() for to map local sub-DM (including ghost) indices to packed global
8696eb61c8cSJed Brown        indices.
87047c6ae99SBarry Smith 
8719ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(),
87247c6ae99SBarry Smith          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(),
87347c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries()
87447c6ae99SBarry Smith 
87547c6ae99SBarry Smith @*/
8766eb61c8cSJed Brown 
8777087cfbeSBarry Smith PetscErrorCode  DMCompositeGetGlobalISs(DM dm,IS *is[])
87847c6ae99SBarry Smith {
87947c6ae99SBarry Smith   PetscErrorCode         ierr;
88047c6ae99SBarry Smith   PetscInt               cnt = 0,*idx,i;
88147c6ae99SBarry Smith   struct DMCompositeLink *next;
88247c6ae99SBarry Smith   PetscMPIInt            rank;
88347c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
88447c6ae99SBarry Smith 
88547c6ae99SBarry Smith   PetscFunctionBegin;
88647c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
8879ae5db72SJed Brown   ierr = PetscMalloc((com->nDM)*sizeof(IS),is);CHKERRQ(ierr);
88847c6ae99SBarry Smith   next = com->next;
889ce94432eSBarry Smith   ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr);
89047c6ae99SBarry Smith 
89147c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
89247c6ae99SBarry Smith   while (next) {
89347c6ae99SBarry Smith     ierr = PetscMalloc(next->n*sizeof(PetscInt),&idx);CHKERRQ(ierr);
89447c6ae99SBarry Smith     for (i=0; i<next->n; i++) idx[i] = next->grstart + i;
895ce94432eSBarry Smith     ierr = ISCreateGeneral(PetscObjectComm((PetscObject)dm),next->n,idx,PETSC_OWN_POINTER,&(*is)[cnt]);CHKERRQ(ierr);
89647c6ae99SBarry Smith     cnt++;
89747c6ae99SBarry Smith     next = next->next;
89847c6ae99SBarry Smith   }
89947c6ae99SBarry Smith   PetscFunctionReturn(0);
90047c6ae99SBarry Smith }
90147c6ae99SBarry Smith 
9024d343eeaSMatthew G Knepley #undef __FUNCT__
9034d343eeaSMatthew G Knepley #define __FUNCT__ "DMCreateFieldIS_Composite"
90421c9b008SJed Brown PetscErrorCode DMCreateFieldIS_Composite(DM dm, PetscInt *numFields,char ***fieldNames, IS **fields)
9054d343eeaSMatthew G Knepley {
9064d343eeaSMatthew G Knepley   PetscInt       nDM;
9074d343eeaSMatthew G Knepley   DM             *dms;
9084d343eeaSMatthew G Knepley   PetscInt       i;
9094d343eeaSMatthew G Knepley   PetscErrorCode ierr;
9104d343eeaSMatthew G Knepley 
9114d343eeaSMatthew G Knepley   PetscFunctionBegin;
9124d343eeaSMatthew G Knepley   ierr = DMCompositeGetNumberDM(dm, &nDM);CHKERRQ(ierr);
9138865f1eaSKarl Rupp   if (numFields) *numFields = nDM;
9144d343eeaSMatthew G Knepley   ierr = DMCompositeGetGlobalISs(dm, fields);CHKERRQ(ierr);
9154d343eeaSMatthew G Knepley   if (fieldNames) {
9164d343eeaSMatthew G Knepley     ierr = PetscMalloc(nDM*sizeof(DM), &dms);CHKERRQ(ierr);
9174d343eeaSMatthew G Knepley     ierr = PetscMalloc(nDM*sizeof(const char*), fieldNames);CHKERRQ(ierr);
9184d343eeaSMatthew G Knepley     ierr = DMCompositeGetEntriesArray(dm, dms);CHKERRQ(ierr);
9194d343eeaSMatthew G Knepley     for (i=0; i<nDM; i++) {
9204d343eeaSMatthew G Knepley       char       buf[256];
9214d343eeaSMatthew G Knepley       const char *splitname;
9224d343eeaSMatthew G Knepley 
9234d343eeaSMatthew G Knepley       /* Split naming precedence: object name, prefix, number */
9244d343eeaSMatthew G Knepley       splitname = ((PetscObject) dm)->name;
9254d343eeaSMatthew G Knepley       if (!splitname) {
9264d343eeaSMatthew G Knepley         ierr = PetscObjectGetOptionsPrefix((PetscObject)dms[i],&splitname);CHKERRQ(ierr);
9274d343eeaSMatthew G Knepley         if (splitname) {
9284d343eeaSMatthew G Knepley           size_t len;
9298caf3d72SBarry Smith           ierr                 = PetscStrncpy(buf,splitname,sizeof(buf));CHKERRQ(ierr);
9308caf3d72SBarry Smith           buf[sizeof(buf) - 1] = 0;
9314d343eeaSMatthew G Knepley           ierr                 = PetscStrlen(buf,&len);CHKERRQ(ierr);
9324d343eeaSMatthew G Knepley           if (buf[len-1] == '_') buf[len-1] = 0; /* Remove trailing underscore if it was used */
9334d343eeaSMatthew G Knepley           splitname = buf;
9344d343eeaSMatthew G Knepley         }
9354d343eeaSMatthew G Knepley       }
9364d343eeaSMatthew G Knepley       if (!splitname) {
9378caf3d72SBarry Smith         ierr      = PetscSNPrintf(buf,sizeof(buf),"%D",i);CHKERRQ(ierr);
9384d343eeaSMatthew G Knepley         splitname = buf;
9394d343eeaSMatthew G Knepley       }
94021c9b008SJed Brown       ierr = PetscStrallocpy(splitname,&(*fieldNames)[i]);CHKERRQ(ierr);
9414d343eeaSMatthew G Knepley     }
9424d343eeaSMatthew G Knepley     ierr = PetscFree(dms);CHKERRQ(ierr);
9434d343eeaSMatthew G Knepley   }
9444d343eeaSMatthew G Knepley   PetscFunctionReturn(0);
9454d343eeaSMatthew G Knepley }
9464d343eeaSMatthew G Knepley 
947e7c4fc90SDmitry Karpeev /*
948e7c4fc90SDmitry Karpeev  This could take over from DMCreateFieldIS(), as it is more general,
9490298fd71SBarry Smith  making DMCreateFieldIS() a special case -- calling with dmlist == NULL;
950e7c4fc90SDmitry Karpeev  At this point it's probably best to be less intrusive, however.
951e7c4fc90SDmitry Karpeev  */
952e7c4fc90SDmitry Karpeev #undef __FUNCT__
95316621825SDmitry Karpeev #define __FUNCT__ "DMCreateFieldDecomposition_Composite"
95416621825SDmitry Karpeev PetscErrorCode DMCreateFieldDecomposition_Composite(DM dm, PetscInt *len,char ***namelist, IS **islist, DM **dmlist)
955e7c4fc90SDmitry Karpeev {
956e7c4fc90SDmitry Karpeev   PetscInt       nDM;
957e7c4fc90SDmitry Karpeev   PetscInt       i;
958e7c4fc90SDmitry Karpeev   PetscErrorCode ierr;
959e7c4fc90SDmitry Karpeev 
960e7c4fc90SDmitry Karpeev   PetscFunctionBegin;
961e7c4fc90SDmitry Karpeev   ierr = DMCreateFieldIS_Composite(dm, len, namelist, islist);CHKERRQ(ierr);
962e7c4fc90SDmitry Karpeev   if (dmlist) {
963e7c4fc90SDmitry Karpeev     ierr = DMCompositeGetNumberDM(dm, &nDM);CHKERRQ(ierr);
964e7c4fc90SDmitry Karpeev     ierr = PetscMalloc(nDM*sizeof(DM), dmlist);CHKERRQ(ierr);
965e7c4fc90SDmitry Karpeev     ierr = DMCompositeGetEntriesArray(dm, *dmlist);CHKERRQ(ierr);
966e7c4fc90SDmitry Karpeev     for (i=0; i<nDM; i++) {
967e7c4fc90SDmitry Karpeev       ierr = PetscObjectReference((PetscObject)((*dmlist)[i]));CHKERRQ(ierr);
968e7c4fc90SDmitry Karpeev     }
969e7c4fc90SDmitry Karpeev   }
970e7c4fc90SDmitry Karpeev   PetscFunctionReturn(0);
971e7c4fc90SDmitry Karpeev }
972e7c4fc90SDmitry Karpeev 
973e7c4fc90SDmitry Karpeev 
974e7c4fc90SDmitry Karpeev 
97547c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/
97647c6ae99SBarry Smith #undef __FUNCT__
97747c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors"
97847c6ae99SBarry Smith /*@C
9799ae5db72SJed Brown     DMCompositeGetLocalVectors - Gets local vectors for each part of a DMComposite.
98047c6ae99SBarry Smith        Use DMCompositeRestoreLocalVectors() to return them.
98147c6ae99SBarry Smith 
98247c6ae99SBarry Smith     Not Collective
98347c6ae99SBarry Smith 
98447c6ae99SBarry Smith     Input Parameter:
98547c6ae99SBarry Smith .    dm - the packer object
98647c6ae99SBarry Smith 
98747c6ae99SBarry Smith     Output Parameter:
9889ae5db72SJed Brown .   Vec ... - the individual sequential Vecs
98947c6ae99SBarry Smith 
99047c6ae99SBarry Smith     Level: advanced
99147c6ae99SBarry Smith 
9929ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(),
9936eb61c8cSJed Brown          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
99447c6ae99SBarry Smith          DMCompositeRestoreLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries()
99547c6ae99SBarry Smith 
99647c6ae99SBarry Smith @*/
9977087cfbeSBarry Smith PetscErrorCode  DMCompositeGetLocalVectors(DM dm,...)
99847c6ae99SBarry Smith {
99947c6ae99SBarry Smith   va_list                Argp;
100047c6ae99SBarry Smith   PetscErrorCode         ierr;
100147c6ae99SBarry Smith   struct DMCompositeLink *next;
100247c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
100347c6ae99SBarry Smith 
100447c6ae99SBarry Smith   PetscFunctionBegin;
100547c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
100647c6ae99SBarry Smith   next = com->next;
100747c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
100847c6ae99SBarry Smith   va_start(Argp,dm);
100947c6ae99SBarry Smith   while (next) {
101047c6ae99SBarry Smith     Vec *vec;
101147c6ae99SBarry Smith     vec = va_arg(Argp, Vec*);
101206930112SJed Brown     if (vec) {ierr = DMGetLocalVector(next->dm,vec);CHKERRQ(ierr);}
101347c6ae99SBarry Smith     next = next->next;
101447c6ae99SBarry Smith   }
101547c6ae99SBarry Smith   va_end(Argp);
101647c6ae99SBarry Smith   PetscFunctionReturn(0);
101747c6ae99SBarry Smith }
101847c6ae99SBarry Smith 
101947c6ae99SBarry Smith #undef __FUNCT__
102047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors"
102147c6ae99SBarry Smith /*@C
10229ae5db72SJed Brown     DMCompositeRestoreLocalVectors - Restores local vectors for each part of a DMComposite.
102347c6ae99SBarry Smith 
102447c6ae99SBarry Smith     Not Collective
102547c6ae99SBarry Smith 
102647c6ae99SBarry Smith     Input Parameter:
102747c6ae99SBarry Smith .    dm - the packer object
102847c6ae99SBarry Smith 
102947c6ae99SBarry Smith     Output Parameter:
10309ae5db72SJed Brown .   Vec ... - the individual sequential Vecs
103147c6ae99SBarry Smith 
103247c6ae99SBarry Smith     Level: advanced
103347c6ae99SBarry Smith 
10349ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(),
10356eb61c8cSJed Brown          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
103647c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries()
103747c6ae99SBarry Smith 
103847c6ae99SBarry Smith @*/
10397087cfbeSBarry Smith PetscErrorCode  DMCompositeRestoreLocalVectors(DM dm,...)
104047c6ae99SBarry Smith {
104147c6ae99SBarry Smith   va_list                Argp;
104247c6ae99SBarry Smith   PetscErrorCode         ierr;
104347c6ae99SBarry Smith   struct DMCompositeLink *next;
104447c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
104547c6ae99SBarry Smith 
104647c6ae99SBarry Smith   PetscFunctionBegin;
104747c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
104847c6ae99SBarry Smith   next = com->next;
104947c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
105047c6ae99SBarry Smith   va_start(Argp,dm);
105147c6ae99SBarry Smith   while (next) {
105247c6ae99SBarry Smith     Vec *vec;
105347c6ae99SBarry Smith     vec = va_arg(Argp, Vec*);
105406930112SJed Brown     if (vec) {ierr = DMRestoreLocalVector(next->dm,vec);CHKERRQ(ierr);}
105547c6ae99SBarry Smith     next = next->next;
105647c6ae99SBarry Smith   }
105747c6ae99SBarry Smith   va_end(Argp);
105847c6ae99SBarry Smith   PetscFunctionReturn(0);
105947c6ae99SBarry Smith }
106047c6ae99SBarry Smith 
106147c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/
106247c6ae99SBarry Smith #undef __FUNCT__
106347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries"
106447c6ae99SBarry Smith /*@C
10659ae5db72SJed Brown     DMCompositeGetEntries - Gets the DM for each entry in a DMComposite.
106647c6ae99SBarry Smith 
106747c6ae99SBarry Smith     Not Collective
106847c6ae99SBarry Smith 
106947c6ae99SBarry Smith     Input Parameter:
107047c6ae99SBarry Smith .    dm - the packer object
107147c6ae99SBarry Smith 
107247c6ae99SBarry Smith     Output Parameter:
10739ae5db72SJed Brown .   DM ... - the individual entries (DMs)
107447c6ae99SBarry Smith 
107547c6ae99SBarry Smith     Level: advanced
107647c6ae99SBarry Smith 
10772fa5ba8aSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), DMCompositeGetEntriesArray()
10786eb61c8cSJed Brown          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
107947c6ae99SBarry Smith          DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(),  DMCompositeScatter(),
108047c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors()
108147c6ae99SBarry Smith 
108247c6ae99SBarry Smith @*/
10837087cfbeSBarry Smith PetscErrorCode  DMCompositeGetEntries(DM dm,...)
108447c6ae99SBarry Smith {
108547c6ae99SBarry Smith   va_list                Argp;
108647c6ae99SBarry Smith   struct DMCompositeLink *next;
108747c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
108847c6ae99SBarry Smith 
108947c6ae99SBarry Smith   PetscFunctionBegin;
109047c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
109147c6ae99SBarry Smith   next = com->next;
109247c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
109347c6ae99SBarry Smith   va_start(Argp,dm);
109447c6ae99SBarry Smith   while (next) {
109547c6ae99SBarry Smith     DM *dmn;
109647c6ae99SBarry Smith     dmn = va_arg(Argp, DM*);
10979ae5db72SJed Brown     if (dmn) *dmn = next->dm;
109847c6ae99SBarry Smith     next = next->next;
109947c6ae99SBarry Smith   }
110047c6ae99SBarry Smith   va_end(Argp);
110147c6ae99SBarry Smith   PetscFunctionReturn(0);
110247c6ae99SBarry Smith }
110347c6ae99SBarry Smith 
110447c6ae99SBarry Smith #undef __FUNCT__
11052fa5ba8aSJed Brown #define __FUNCT__ "DMCompositeGetEntriesArray"
1106dbab29e1SMark F. Adams /*@C
11072fa5ba8aSJed Brown     DMCompositeGetEntriesArray - Gets the DM for each entry in a DMComposite.
11082fa5ba8aSJed Brown 
11092fa5ba8aSJed Brown     Not Collective
11102fa5ba8aSJed Brown 
11112fa5ba8aSJed Brown     Input Parameter:
11122fa5ba8aSJed Brown +    dm - the packer object
11132fa5ba8aSJed Brown -    dms - array of sufficient length (see DMCompositeGetNumberDM()), holds the DMs on output
11142fa5ba8aSJed Brown 
11152fa5ba8aSJed Brown     Level: advanced
11162fa5ba8aSJed Brown 
11172fa5ba8aSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), DMCompositeGetEntries()
11182fa5ba8aSJed Brown          DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(),
11192fa5ba8aSJed Brown          DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(),  DMCompositeScatter(),
11202fa5ba8aSJed Brown          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors()
11212fa5ba8aSJed Brown 
11222fa5ba8aSJed Brown @*/
11232fa5ba8aSJed Brown PetscErrorCode DMCompositeGetEntriesArray(DM dm,DM dms[])
11242fa5ba8aSJed Brown {
11252fa5ba8aSJed Brown   struct DMCompositeLink *next;
11262fa5ba8aSJed Brown   DM_Composite           *com = (DM_Composite*)dm->data;
11272fa5ba8aSJed Brown   PetscInt               i;
11282fa5ba8aSJed Brown 
11292fa5ba8aSJed Brown   PetscFunctionBegin;
11302fa5ba8aSJed Brown   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
11312fa5ba8aSJed Brown   /* loop over packed objects, handling one at at time */
11322fa5ba8aSJed Brown   for (next=com->next,i=0; next; next=next->next,i++) dms[i] = next->dm;
11332fa5ba8aSJed Brown   PetscFunctionReturn(0);
11342fa5ba8aSJed Brown }
11352fa5ba8aSJed Brown 
11362fa5ba8aSJed Brown #undef __FUNCT__
11370c010503SBarry Smith #define __FUNCT__ "DMRefine_Composite"
11387087cfbeSBarry Smith PetscErrorCode  DMRefine_Composite(DM dmi,MPI_Comm comm,DM *fine)
113947c6ae99SBarry Smith {
114047c6ae99SBarry Smith   PetscErrorCode         ierr;
114147c6ae99SBarry Smith   struct DMCompositeLink *next;
114247c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dmi->data;
114347c6ae99SBarry Smith   DM                     dm;
114447c6ae99SBarry Smith 
114547c6ae99SBarry Smith   PetscFunctionBegin;
114647c6ae99SBarry Smith   PetscValidHeaderSpecific(dmi,DM_CLASSID,1);
1147ce94432eSBarry Smith   if (comm == MPI_COMM_NULL) {
1148ce94432eSBarry Smith     ierr = PetscObjectGetComm((PetscObject)dmi,&comm);CHKERRQ(ierr);
1149ce94432eSBarry Smith   }
11502ce3a92bSJed Brown   ierr = DMSetUp(dmi);CHKERRQ(ierr);
115147c6ae99SBarry Smith   next = com->next;
115247c6ae99SBarry Smith   ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr);
115347c6ae99SBarry Smith 
115447c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
115547c6ae99SBarry Smith   while (next) {
115647c6ae99SBarry Smith     ierr = DMRefine(next->dm,comm,&dm);CHKERRQ(ierr);
115747c6ae99SBarry Smith     ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr);
115847c6ae99SBarry Smith     ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr);
115947c6ae99SBarry Smith     next = next->next;
116047c6ae99SBarry Smith   }
116147c6ae99SBarry Smith   PetscFunctionReturn(0);
116247c6ae99SBarry Smith }
116347c6ae99SBarry Smith 
116414354c39SJed Brown #undef __FUNCT__
116514354c39SJed Brown #define __FUNCT__ "DMCoarsen_Composite"
116614354c39SJed Brown PetscErrorCode  DMCoarsen_Composite(DM dmi,MPI_Comm comm,DM *fine)
116714354c39SJed Brown {
116814354c39SJed Brown   PetscErrorCode         ierr;
116914354c39SJed Brown   struct DMCompositeLink *next;
117014354c39SJed Brown   DM_Composite           *com = (DM_Composite*)dmi->data;
117114354c39SJed Brown   DM                     dm;
117214354c39SJed Brown 
117314354c39SJed Brown   PetscFunctionBegin;
117414354c39SJed Brown   PetscValidHeaderSpecific(dmi,DM_CLASSID,1);
11752ce3a92bSJed Brown   ierr = DMSetUp(dmi);CHKERRQ(ierr);
11762ee06e3bSJed Brown   if (comm == MPI_COMM_NULL) {
117725296bd5SBarry Smith     ierr = PetscObjectGetComm((PetscObject)dmi,&comm);CHKERRQ(ierr);
117825296bd5SBarry Smith   }
117914354c39SJed Brown   next = com->next;
118014354c39SJed Brown   ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr);
118114354c39SJed Brown 
118214354c39SJed Brown   /* loop over packed objects, handling one at at time */
118314354c39SJed Brown   while (next) {
118414354c39SJed Brown     ierr = DMCoarsen(next->dm,comm,&dm);CHKERRQ(ierr);
118514354c39SJed Brown     ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr);
118614354c39SJed Brown     ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr);
118714354c39SJed Brown     next = next->next;
118814354c39SJed Brown   }
118914354c39SJed Brown   PetscFunctionReturn(0);
119014354c39SJed Brown }
119147c6ae99SBarry Smith 
119247c6ae99SBarry Smith #undef __FUNCT__
1193e727c939SJed Brown #define __FUNCT__ "DMCreateInterpolation_Composite"
1194e727c939SJed Brown PetscErrorCode  DMCreateInterpolation_Composite(DM coarse,DM fine,Mat *A,Vec *v)
119547c6ae99SBarry Smith {
119647c6ae99SBarry Smith   PetscErrorCode         ierr;
11979ae5db72SJed Brown   PetscInt               m,n,M,N,nDM,i;
119847c6ae99SBarry Smith   struct DMCompositeLink *nextc;
119947c6ae99SBarry Smith   struct DMCompositeLink *nextf;
120025296bd5SBarry Smith   Vec                    gcoarse,gfine,*vecs;
120147c6ae99SBarry Smith   DM_Composite           *comcoarse = (DM_Composite*)coarse->data;
120247c6ae99SBarry Smith   DM_Composite           *comfine   = (DM_Composite*)fine->data;
12039ae5db72SJed Brown   Mat                    *mats;
120447c6ae99SBarry Smith 
120547c6ae99SBarry Smith   PetscFunctionBegin;
120647c6ae99SBarry Smith   PetscValidHeaderSpecific(coarse,DM_CLASSID,1);
120747c6ae99SBarry Smith   PetscValidHeaderSpecific(fine,DM_CLASSID,2);
1208f692024eSJed Brown   ierr = DMSetUp(coarse);CHKERRQ(ierr);
1209f692024eSJed Brown   ierr = DMSetUp(fine);CHKERRQ(ierr);
121047c6ae99SBarry Smith   /* use global vectors only for determining matrix layout */
12119ae5db72SJed Brown   ierr = DMGetGlobalVector(coarse,&gcoarse);CHKERRQ(ierr);
12129ae5db72SJed Brown   ierr = DMGetGlobalVector(fine,&gfine);CHKERRQ(ierr);
121347c6ae99SBarry Smith   ierr = VecGetLocalSize(gcoarse,&n);CHKERRQ(ierr);
121447c6ae99SBarry Smith   ierr = VecGetLocalSize(gfine,&m);CHKERRQ(ierr);
121547c6ae99SBarry Smith   ierr = VecGetSize(gcoarse,&N);CHKERRQ(ierr);
121647c6ae99SBarry Smith   ierr = VecGetSize(gfine,&M);CHKERRQ(ierr);
12179ae5db72SJed Brown   ierr = DMRestoreGlobalVector(coarse,&gcoarse);CHKERRQ(ierr);
12189ae5db72SJed Brown   ierr = DMRestoreGlobalVector(fine,&gfine);CHKERRQ(ierr);
121947c6ae99SBarry Smith 
12209ae5db72SJed Brown   nDM = comfine->nDM;
1221ce94432eSBarry Smith   if (nDM != comcoarse->nDM) SETERRQ2(PetscObjectComm((PetscObject)fine),PETSC_ERR_ARG_INCOMP,"Fine DMComposite has %D entries, but coarse has %D",nDM,comcoarse->nDM);
12229ae5db72SJed Brown   ierr = PetscMalloc(nDM*nDM*sizeof(Mat),&mats);CHKERRQ(ierr);
12239ae5db72SJed Brown   ierr = PetscMemzero(mats,nDM*nDM*sizeof(Mat));CHKERRQ(ierr);
122425296bd5SBarry Smith   if (v) {
122525296bd5SBarry Smith     ierr = PetscMalloc(nDM*sizeof(Vec),&vecs);CHKERRQ(ierr);
122625296bd5SBarry Smith     ierr = PetscMemzero(vecs,nDM*sizeof(Vec));CHKERRQ(ierr);
122725296bd5SBarry Smith   }
122847c6ae99SBarry Smith 
122947c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
12309ae5db72SJed Brown   for (nextc=comcoarse->next,nextf=comfine->next,i=0; nextc; nextc=nextc->next,nextf=nextf->next,i++) {
123125296bd5SBarry Smith     if (!v) {
12320298fd71SBarry Smith       ierr = DMCreateInterpolation(nextc->dm,nextf->dm,&mats[i*nDM+i],NULL);CHKERRQ(ierr);
123325296bd5SBarry Smith     } else {
123425296bd5SBarry Smith       ierr = DMCreateInterpolation(nextc->dm,nextf->dm,&mats[i*nDM+i],&vecs[i]);CHKERRQ(ierr);
123525296bd5SBarry Smith     }
123647c6ae99SBarry Smith   }
1237ce94432eSBarry Smith   ierr = MatCreateNest(PetscObjectComm((PetscObject)fine),nDM,NULL,nDM,NULL,mats,A);CHKERRQ(ierr);
123825296bd5SBarry Smith   if (v) {
1239ce94432eSBarry Smith     ierr = VecCreateNest(PetscObjectComm((PetscObject)fine),nDM,NULL,vecs,v);CHKERRQ(ierr);
124025296bd5SBarry Smith   }
12419ae5db72SJed Brown   for (i=0; i<nDM*nDM; i++) {ierr = MatDestroy(&mats[i]);CHKERRQ(ierr);}
12429ae5db72SJed Brown   ierr = PetscFree(mats);CHKERRQ(ierr);
124325296bd5SBarry Smith   if (v) {
124425296bd5SBarry Smith     for (i=0; i<nDM; i++) {ierr = VecDestroy(&vecs[i]);CHKERRQ(ierr);}
124525296bd5SBarry Smith     ierr = PetscFree(vecs);CHKERRQ(ierr);
124625296bd5SBarry Smith   }
124747c6ae99SBarry Smith   PetscFunctionReturn(0);
124847c6ae99SBarry Smith }
124947c6ae99SBarry Smith 
125047c6ae99SBarry Smith #undef __FUNCT__
12511411c6eeSJed Brown #define __FUNCT__ "DMCreateLocalToGlobalMapping_Composite"
12521411c6eeSJed Brown static PetscErrorCode DMCreateLocalToGlobalMapping_Composite(DM dm)
12531411c6eeSJed Brown {
12541411c6eeSJed Brown   DM_Composite           *com = (DM_Composite*)dm->data;
12551411c6eeSJed Brown   ISLocalToGlobalMapping *ltogs;
1256f7efa3c7SJed Brown   PetscInt               i;
12571411c6eeSJed Brown   PetscErrorCode         ierr;
12581411c6eeSJed Brown 
12591411c6eeSJed Brown   PetscFunctionBegin;
12601411c6eeSJed Brown   /* Set the ISLocalToGlobalMapping on the new matrix */
12611411c6eeSJed Brown   ierr = DMCompositeGetISLocalToGlobalMappings(dm,&ltogs);CHKERRQ(ierr);
1262ce94432eSBarry Smith   ierr = ISLocalToGlobalMappingConcatenate(PetscObjectComm((PetscObject)dm),com->nDM,ltogs,&dm->ltogmap);CHKERRQ(ierr);
12639ae5db72SJed Brown   for (i=0; i<com->nDM; i++) {ierr = ISLocalToGlobalMappingDestroy(&ltogs[i]);CHKERRQ(ierr);}
12641411c6eeSJed Brown   ierr = PetscFree(ltogs);CHKERRQ(ierr);
12651411c6eeSJed Brown   PetscFunctionReturn(0);
12661411c6eeSJed Brown }
12671411c6eeSJed Brown 
12681411c6eeSJed Brown 
12691411c6eeSJed Brown #undef __FUNCT__
1270e727c939SJed Brown #define __FUNCT__ "DMCreateColoring_Composite"
127119fd82e9SBarry Smith PetscErrorCode  DMCreateColoring_Composite(DM dm,ISColoringType ctype,MatType mtype,ISColoring *coloring)
127247c6ae99SBarry Smith {
127347c6ae99SBarry Smith   PetscErrorCode  ierr;
127447c6ae99SBarry Smith   PetscInt        n,i,cnt;
127547c6ae99SBarry Smith   ISColoringValue *colors;
127647c6ae99SBarry Smith   PetscBool       dense  = PETSC_FALSE;
127747c6ae99SBarry Smith   ISColoringValue maxcol = 0;
127847c6ae99SBarry Smith   DM_Composite    *com   = (DM_Composite*)dm->data;
127947c6ae99SBarry Smith 
128047c6ae99SBarry Smith   PetscFunctionBegin;
128147c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
1282ce94432eSBarry Smith   if (ctype == IS_COLORING_GHOSTED) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_SUP,"Only global coloring supported");
1283e3247f34SBarry Smith   else if (ctype == IS_COLORING_GLOBAL) {
128447c6ae99SBarry Smith     n = com->n;
1285ce94432eSBarry Smith   } else SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_ARG_OUTOFRANGE,"Unknown ISColoringType");
128647c6ae99SBarry Smith   ierr = PetscMalloc(n*sizeof(ISColoringValue),&colors);CHKERRQ(ierr); /* freed in ISColoringDestroy() */
128747c6ae99SBarry Smith 
12880298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-dmcomposite_dense_jacobian",&dense,NULL);CHKERRQ(ierr);
128947c6ae99SBarry Smith   if (dense) {
129047c6ae99SBarry Smith     for (i=0; i<n; i++) {
129147c6ae99SBarry Smith       colors[i] = (ISColoringValue)(com->rstart + i);
129247c6ae99SBarry Smith     }
129347c6ae99SBarry Smith     maxcol = com->N;
129447c6ae99SBarry Smith   } else {
129547c6ae99SBarry Smith     struct DMCompositeLink *next = com->next;
129647c6ae99SBarry Smith     PetscMPIInt            rank;
129747c6ae99SBarry Smith 
1298ce94432eSBarry Smith     ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr);
129947c6ae99SBarry Smith     cnt  = 0;
130047c6ae99SBarry Smith     while (next) {
130147c6ae99SBarry Smith       ISColoring lcoloring;
130247c6ae99SBarry Smith 
1303e727c939SJed Brown       ierr = DMCreateColoring(next->dm,IS_COLORING_GLOBAL,mtype,&lcoloring);CHKERRQ(ierr);
130447c6ae99SBarry Smith       for (i=0; i<lcoloring->N; i++) {
130547c6ae99SBarry Smith         colors[cnt++] = maxcol + lcoloring->colors[i];
130647c6ae99SBarry Smith       }
130747c6ae99SBarry Smith       maxcol += lcoloring->n;
1308fcfd50ebSBarry Smith       ierr    = ISColoringDestroy(&lcoloring);CHKERRQ(ierr);
130947c6ae99SBarry Smith       next    = next->next;
131047c6ae99SBarry Smith     }
131147c6ae99SBarry Smith   }
1312ce94432eSBarry Smith   ierr = ISColoringCreate(PetscObjectComm((PetscObject)dm),maxcol,n,colors,coloring);CHKERRQ(ierr);
131347c6ae99SBarry Smith   PetscFunctionReturn(0);
131447c6ae99SBarry Smith }
131547c6ae99SBarry Smith 
131647c6ae99SBarry Smith #undef __FUNCT__
13170c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalBegin_Composite"
13187087cfbeSBarry Smith PetscErrorCode  DMGlobalToLocalBegin_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec)
131947c6ae99SBarry Smith {
132047c6ae99SBarry Smith   PetscErrorCode         ierr;
132147c6ae99SBarry Smith   struct DMCompositeLink *next;
132247c6ae99SBarry Smith   PetscInt               cnt = 3;
132347c6ae99SBarry Smith   PetscMPIInt            rank;
132447c6ae99SBarry Smith   PetscScalar            *garray,*larray;
132547c6ae99SBarry Smith   DM_Composite           *com = (DM_Composite*)dm->data;
132647c6ae99SBarry Smith 
132747c6ae99SBarry Smith   PetscFunctionBegin;
132847c6ae99SBarry Smith   PetscValidHeaderSpecific(dm,DM_CLASSID,1);
132947c6ae99SBarry Smith   PetscValidHeaderSpecific(gvec,VEC_CLASSID,2);
133047c6ae99SBarry Smith   next = com->next;
133147c6ae99SBarry Smith   if (!com->setup) {
1332d7bf68aeSBarry Smith     ierr = DMSetUp(dm);CHKERRQ(ierr);
133347c6ae99SBarry Smith   }
1334ce94432eSBarry Smith   ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr);
133547c6ae99SBarry Smith   ierr = VecGetArray(gvec,&garray);CHKERRQ(ierr);
133647c6ae99SBarry Smith   ierr = VecGetArray(lvec,&larray);CHKERRQ(ierr);
133747c6ae99SBarry Smith 
133847c6ae99SBarry Smith   /* loop over packed objects, handling one at at time */
133947c6ae99SBarry Smith   while (next) {
134047c6ae99SBarry Smith     Vec      local,global;
134147c6ae99SBarry Smith     PetscInt N;
134247c6ae99SBarry Smith 
134347c6ae99SBarry Smith     ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr);
134447c6ae99SBarry Smith     ierr = VecGetLocalSize(global,&N);CHKERRQ(ierr);
134547c6ae99SBarry Smith     ierr = VecPlaceArray(global,garray);CHKERRQ(ierr);
134647c6ae99SBarry Smith     ierr = DMGetLocalVector(next->dm,&local);CHKERRQ(ierr);
134747c6ae99SBarry Smith     ierr = VecPlaceArray(local,larray);CHKERRQ(ierr);
134847c6ae99SBarry Smith     ierr = DMGlobalToLocalBegin(next->dm,global,mode,local);CHKERRQ(ierr);
134947c6ae99SBarry Smith     ierr = DMGlobalToLocalEnd(next->dm,global,mode,local);CHKERRQ(ierr);
135047c6ae99SBarry Smith     ierr = VecResetArray(global);CHKERRQ(ierr);
135147c6ae99SBarry Smith     ierr = VecResetArray(local);CHKERRQ(ierr);
135247c6ae99SBarry Smith     ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr);
135347c6ae99SBarry Smith     ierr = DMRestoreGlobalVector(next->dm,&local);CHKERRQ(ierr);
135447c6ae99SBarry Smith     cnt++;
135506ebdd98SJed Brown     larray += next->nlocal;
135647c6ae99SBarry Smith     next    = next->next;
135747c6ae99SBarry Smith   }
135847c6ae99SBarry Smith 
13590298fd71SBarry Smith   ierr = VecRestoreArray(gvec,NULL);CHKERRQ(ierr);
13600298fd71SBarry Smith   ierr = VecRestoreArray(lvec,NULL);CHKERRQ(ierr);
136147c6ae99SBarry Smith   PetscFunctionReturn(0);
136247c6ae99SBarry Smith }
136347c6ae99SBarry Smith 
136447c6ae99SBarry Smith #undef __FUNCT__
13650c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalEnd_Composite"
13667087cfbeSBarry Smith PetscErrorCode  DMGlobalToLocalEnd_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec)
13670c010503SBarry Smith {
13680c010503SBarry Smith   PetscFunctionBegin;
13690c010503SBarry Smith   PetscFunctionReturn(0);
13700c010503SBarry Smith }
137147c6ae99SBarry Smith 
13726ae3a549SBarry Smith /*MC
13736ae3a549SBarry Smith    DMCOMPOSITE = "composite" - A DM object that is used to manage data for a collection of DMs
13746ae3a549SBarry Smith 
13756ae3a549SBarry Smith 
13766ae3a549SBarry Smith 
13776ae3a549SBarry Smith   Level: intermediate
13786ae3a549SBarry Smith 
13796ae3a549SBarry Smith .seealso: DMType, DMCOMPOSITE, DMDACreate(), DMCreate(), DMSetType(), DMCompositeCreate()
13806ae3a549SBarry Smith M*/
13816ae3a549SBarry Smith 
13826ae3a549SBarry Smith 
1383a4121054SBarry Smith #undef __FUNCT__
1384a4121054SBarry Smith #define __FUNCT__ "DMCreate_Composite"
1385*8cc058d9SJed Brown PETSC_EXTERN PetscErrorCode DMCreate_Composite(DM p)
1386a4121054SBarry Smith {
1387a4121054SBarry Smith   PetscErrorCode ierr;
1388a4121054SBarry Smith   DM_Composite   *com;
1389a4121054SBarry Smith 
1390a4121054SBarry Smith   PetscFunctionBegin;
1391a4121054SBarry Smith   ierr      = PetscNewLog(p,DM_Composite,&com);CHKERRQ(ierr);
1392a4121054SBarry Smith   p->data   = com;
1393a4121054SBarry Smith   ierr      = PetscObjectChangeTypeName((PetscObject)p,"DMComposite");CHKERRQ(ierr);
1394a4121054SBarry Smith   com->n    = 0;
13950298fd71SBarry Smith   com->next = NULL;
1396a4121054SBarry Smith   com->nDM  = 0;
1397a4121054SBarry Smith 
1398a4121054SBarry Smith   p->ops->createglobalvector              = DMCreateGlobalVector_Composite;
1399a4121054SBarry Smith   p->ops->createlocalvector               = DMCreateLocalVector_Composite;
14001411c6eeSJed Brown   p->ops->createlocaltoglobalmapping      = DMCreateLocalToGlobalMapping_Composite;
14011411c6eeSJed Brown   p->ops->createlocaltoglobalmappingblock = 0;
14024d343eeaSMatthew G Knepley   p->ops->createfieldis                   = DMCreateFieldIS_Composite;
140316621825SDmitry Karpeev   p->ops->createfielddecomposition        = DMCreateFieldDecomposition_Composite;
1404a4121054SBarry Smith   p->ops->refine                          = DMRefine_Composite;
140514354c39SJed Brown   p->ops->coarsen                         = DMCoarsen_Composite;
140625296bd5SBarry Smith   p->ops->createinterpolation             = DMCreateInterpolation_Composite;
140725296bd5SBarry Smith   p->ops->creatematrix                    = DMCreateMatrix_Composite;
1408e727c939SJed Brown   p->ops->getcoloring                     = DMCreateColoring_Composite;
1409a4121054SBarry Smith   p->ops->globaltolocalbegin              = DMGlobalToLocalBegin_Composite;
1410a4121054SBarry Smith   p->ops->globaltolocalend                = DMGlobalToLocalEnd_Composite;
1411a4121054SBarry Smith   p->ops->destroy                         = DMDestroy_Composite;
1412a4121054SBarry Smith   p->ops->view                            = DMView_Composite;
1413a4121054SBarry Smith   p->ops->setup                           = DMSetUp_Composite;
1414a4121054SBarry Smith   PetscFunctionReturn(0);
1415a4121054SBarry Smith }
1416a4121054SBarry Smith 
14170c010503SBarry Smith #undef __FUNCT__
14180c010503SBarry Smith #define __FUNCT__ "DMCompositeCreate"
14190c010503SBarry Smith /*@C
14200c010503SBarry Smith     DMCompositeCreate - Creates a vector packer, used to generate "composite"
14210c010503SBarry Smith       vectors made up of several subvectors.
14220c010503SBarry Smith 
14230c010503SBarry Smith     Collective on MPI_Comm
142447c6ae99SBarry Smith 
142547c6ae99SBarry Smith     Input Parameter:
14260c010503SBarry Smith .   comm - the processors that will share the global vector
14270c010503SBarry Smith 
14280c010503SBarry Smith     Output Parameters:
14290c010503SBarry Smith .   packer - the packer object
143047c6ae99SBarry Smith 
143147c6ae99SBarry Smith     Level: advanced
143247c6ae99SBarry Smith 
14339ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCompositeScatter(),
14346eb61c8cSJed Brown          DMCompositeGather(), DMCreateGlobalVector(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess()
143547c6ae99SBarry Smith          DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries()
143647c6ae99SBarry Smith 
143747c6ae99SBarry Smith @*/
14387087cfbeSBarry Smith PetscErrorCode  DMCompositeCreate(MPI_Comm comm,DM *packer)
143947c6ae99SBarry Smith {
14400c010503SBarry Smith   PetscErrorCode ierr;
14410c010503SBarry Smith 
144247c6ae99SBarry Smith   PetscFunctionBegin;
14430c010503SBarry Smith   PetscValidPointer(packer,2);
1444a4121054SBarry Smith   ierr = DMCreate(comm,packer);CHKERRQ(ierr);
1445a4121054SBarry Smith   ierr = DMSetType(*packer,DMCOMPOSITE);CHKERRQ(ierr);
144647c6ae99SBarry Smith   PetscFunctionReturn(0);
144747c6ae99SBarry Smith }
1448