147c6ae99SBarry Smith 2ccd284c7SBarry Smith #include <../src/dm/impls/composite/packimpl.h> /*I "petscdmcomposite.h" I*/ 301e13f73SMatthew G. Knepley #include <petsc-private/isimpl.h> 42764a2aaSMatthew G. Knepley #include <petscds.h> 547c6ae99SBarry Smith 647c6ae99SBarry Smith #undef __FUNCT__ 747c6ae99SBarry Smith #define __FUNCT__ "DMCompositeSetCoupling" 847c6ae99SBarry Smith /*@C 947c6ae99SBarry Smith DMCompositeSetCoupling - Sets user provided routines that compute the coupling between the 109ae5db72SJed Brown seperate components (DMs) in a DMto build the correct matrix nonzero structure. 1147c6ae99SBarry Smith 1247c6ae99SBarry Smith 1347c6ae99SBarry Smith Logically Collective on MPI_Comm 1447c6ae99SBarry Smith 1547c6ae99SBarry Smith Input Parameter: 1647c6ae99SBarry Smith + dm - the composite object 1747c6ae99SBarry Smith - formcouplelocations - routine to set the nonzero locations in the matrix 1847c6ae99SBarry Smith 1947c6ae99SBarry Smith Level: advanced 2047c6ae99SBarry Smith 211b2093e4SBarry Smith Notes: See DMSetApplicationContext() and DMGetApplicationContext() for how to get user information into 2247c6ae99SBarry Smith this routine 2347c6ae99SBarry Smith 2447c6ae99SBarry Smith @*/ 257087cfbeSBarry Smith PetscErrorCode DMCompositeSetCoupling(DM dm,PetscErrorCode (*FormCoupleLocations)(DM,Mat,PetscInt*,PetscInt*,PetscInt,PetscInt,PetscInt,PetscInt)) 2647c6ae99SBarry Smith { 2747c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 2847c6ae99SBarry Smith 2947c6ae99SBarry Smith PetscFunctionBegin; 3047c6ae99SBarry Smith com->FormCoupleLocations = FormCoupleLocations; 3147c6ae99SBarry Smith PetscFunctionReturn(0); 3247c6ae99SBarry Smith } 3347c6ae99SBarry Smith 3447c6ae99SBarry Smith #undef __FUNCT__ 350c010503SBarry Smith #define __FUNCT__ "DMDestroy_Composite" 366bf464f9SBarry Smith PetscErrorCode DMDestroy_Composite(DM dm) 3747c6ae99SBarry Smith { 3847c6ae99SBarry Smith PetscErrorCode ierr; 3947c6ae99SBarry Smith struct DMCompositeLink *next, *prev; 4047c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 4147c6ae99SBarry Smith 4247c6ae99SBarry Smith PetscFunctionBegin; 4347c6ae99SBarry Smith next = com->next; 4447c6ae99SBarry Smith while (next) { 4547c6ae99SBarry Smith prev = next; 4647c6ae99SBarry Smith next = next->next; 47fcfd50ebSBarry Smith ierr = DMDestroy(&prev->dm);CHKERRQ(ierr); 4847c6ae99SBarry Smith ierr = PetscFree(prev->grstarts);CHKERRQ(ierr); 4947c6ae99SBarry Smith ierr = PetscFree(prev);CHKERRQ(ierr); 5047c6ae99SBarry Smith } 51435a35e8SMatthew G Knepley /* This was originally freed in DMDestroy(), but that prevents reference counting of backend objects */ 52435a35e8SMatthew G Knepley ierr = PetscFree(com);CHKERRQ(ierr); 5347c6ae99SBarry Smith PetscFunctionReturn(0); 5447c6ae99SBarry Smith } 5547c6ae99SBarry Smith 5647c6ae99SBarry Smith #undef __FUNCT__ 570c010503SBarry Smith #define __FUNCT__ "DMView_Composite" 587087cfbeSBarry Smith PetscErrorCode DMView_Composite(DM dm,PetscViewer v) 5947c6ae99SBarry Smith { 6047c6ae99SBarry Smith PetscErrorCode ierr; 6147c6ae99SBarry Smith PetscBool iascii; 6247c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 6347c6ae99SBarry Smith 6447c6ae99SBarry Smith PetscFunctionBegin; 65251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)v,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 6647c6ae99SBarry Smith if (iascii) { 6747c6ae99SBarry Smith struct DMCompositeLink *lnk = com->next; 6847c6ae99SBarry Smith PetscInt i; 6947c6ae99SBarry Smith 7047c6ae99SBarry Smith ierr = PetscViewerASCIIPrintf(v,"DM (%s)\n",((PetscObject)dm)->prefix ? ((PetscObject)dm)->prefix : "no prefix");CHKERRQ(ierr); 719ae5db72SJed Brown ierr = PetscViewerASCIIPrintf(v," contains %D DMs\n",com->nDM);CHKERRQ(ierr); 7247c6ae99SBarry Smith ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr); 7347c6ae99SBarry Smith for (i=0; lnk; lnk=lnk->next,i++) { 749ae5db72SJed Brown ierr = PetscViewerASCIIPrintf(v,"Link %D: DM of type %s\n",i,((PetscObject)lnk->dm)->type_name);CHKERRQ(ierr); 7547c6ae99SBarry Smith ierr = PetscViewerASCIIPushTab(v);CHKERRQ(ierr); 7647c6ae99SBarry Smith ierr = DMView(lnk->dm,v);CHKERRQ(ierr); 7747c6ae99SBarry Smith ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr); 7847c6ae99SBarry Smith } 7947c6ae99SBarry Smith ierr = PetscViewerASCIIPopTab(v);CHKERRQ(ierr); 8047c6ae99SBarry Smith } 8147c6ae99SBarry Smith PetscFunctionReturn(0); 8247c6ae99SBarry Smith } 8347c6ae99SBarry Smith 8447c6ae99SBarry Smith /* --------------------------------------------------------------------------------------*/ 8547c6ae99SBarry Smith #undef __FUNCT__ 86d7bf68aeSBarry Smith #define __FUNCT__ "DMSetUp_Composite" 877087cfbeSBarry Smith PetscErrorCode DMSetUp_Composite(DM dm) 8847c6ae99SBarry Smith { 8947c6ae99SBarry Smith PetscErrorCode ierr; 9047c6ae99SBarry Smith PetscInt nprev = 0; 9147c6ae99SBarry Smith PetscMPIInt rank,size; 9247c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 9347c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 9447c6ae99SBarry Smith PetscLayout map; 9547c6ae99SBarry Smith 9647c6ae99SBarry Smith PetscFunctionBegin; 97ce94432eSBarry Smith if (com->setup) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_ARG_WRONGSTATE,"Packer has already been setup"); 98ce94432eSBarry Smith ierr = PetscLayoutCreate(PetscObjectComm((PetscObject)dm),&map);CHKERRQ(ierr); 9947c6ae99SBarry Smith ierr = PetscLayoutSetLocalSize(map,com->n);CHKERRQ(ierr); 10047c6ae99SBarry Smith ierr = PetscLayoutSetSize(map,PETSC_DETERMINE);CHKERRQ(ierr); 10147c6ae99SBarry Smith ierr = PetscLayoutSetBlockSize(map,1);CHKERRQ(ierr); 10247c6ae99SBarry Smith ierr = PetscLayoutSetUp(map);CHKERRQ(ierr); 10347c6ae99SBarry Smith ierr = PetscLayoutGetSize(map,&com->N);CHKERRQ(ierr); 1040298fd71SBarry Smith ierr = PetscLayoutGetRange(map,&com->rstart,NULL);CHKERRQ(ierr); 105fcfd50ebSBarry Smith ierr = PetscLayoutDestroy(&map);CHKERRQ(ierr); 10647c6ae99SBarry Smith 1079ae5db72SJed Brown /* now set the rstart for each linked vector */ 108ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 109ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)dm),&size);CHKERRQ(ierr); 11047c6ae99SBarry Smith while (next) { 11147c6ae99SBarry Smith next->rstart = nprev; 11206ebdd98SJed Brown nprev += next->n; 11347c6ae99SBarry Smith next->grstart = com->rstart + next->rstart; 114785e854fSJed Brown ierr = PetscMalloc1(size,&next->grstarts);CHKERRQ(ierr); 115ce94432eSBarry Smith ierr = MPI_Allgather(&next->grstart,1,MPIU_INT,next->grstarts,1,MPIU_INT,PetscObjectComm((PetscObject)dm));CHKERRQ(ierr); 11647c6ae99SBarry Smith next = next->next; 11747c6ae99SBarry Smith } 11847c6ae99SBarry Smith com->setup = PETSC_TRUE; 11947c6ae99SBarry Smith PetscFunctionReturn(0); 12047c6ae99SBarry Smith } 12147c6ae99SBarry Smith 12247c6ae99SBarry Smith /* ----------------------------------------------------------------------------------*/ 12347c6ae99SBarry Smith 12447c6ae99SBarry Smith #undef __FUNCT__ 12547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetNumberDM" 12673e31fe2SJed Brown /*@ 12747c6ae99SBarry Smith DMCompositeGetNumberDM - Get's the number of DM objects in the DMComposite 12847c6ae99SBarry Smith representation. 12947c6ae99SBarry Smith 13047c6ae99SBarry Smith Not Collective 13147c6ae99SBarry Smith 13247c6ae99SBarry Smith Input Parameter: 13347c6ae99SBarry Smith . dm - the packer object 13447c6ae99SBarry Smith 13547c6ae99SBarry Smith Output Parameter: 13647c6ae99SBarry Smith . nDM - the number of DMs 13747c6ae99SBarry Smith 13847c6ae99SBarry Smith Level: beginner 13947c6ae99SBarry Smith 14047c6ae99SBarry Smith @*/ 1417087cfbeSBarry Smith PetscErrorCode DMCompositeGetNumberDM(DM dm,PetscInt *nDM) 14247c6ae99SBarry Smith { 14347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 1445fd66863SKarl Rupp 14547c6ae99SBarry Smith PetscFunctionBegin; 14647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 14747c6ae99SBarry Smith *nDM = com->nDM; 14847c6ae99SBarry Smith PetscFunctionReturn(0); 14947c6ae99SBarry Smith } 15047c6ae99SBarry Smith 15147c6ae99SBarry Smith 15247c6ae99SBarry Smith #undef __FUNCT__ 15347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetAccess" 15447c6ae99SBarry Smith /*@C 15547c6ae99SBarry Smith DMCompositeGetAccess - Allows one to access the individual packed vectors in their global 15647c6ae99SBarry Smith representation. 15747c6ae99SBarry Smith 15847c6ae99SBarry Smith Collective on DMComposite 15947c6ae99SBarry Smith 1609ae5db72SJed Brown Input Parameters: 16147c6ae99SBarry Smith + dm - the packer object 1629ae5db72SJed Brown - gvec - the global vector 1639ae5db72SJed Brown 1649ae5db72SJed Brown Output Parameters: 1650298fd71SBarry Smith . Vec* ... - the packed parallel vectors, NULL for those that are not needed 16647c6ae99SBarry Smith 16747c6ae99SBarry Smith Notes: Use DMCompositeRestoreAccess() to return the vectors when you no longer need them 16847c6ae99SBarry Smith 169f73e5cebSJed Brown Fortran Notes: 170f73e5cebSJed Brown 171f73e5cebSJed Brown Fortran callers must use numbered versions of this routine, e.g., DMCompositeGetAccess4(dm,gvec,vec1,vec2,vec3,vec4) 172f73e5cebSJed Brown or use the alternative interface DMCompositeGetAccessArray(). 173f73e5cebSJed Brown 17447c6ae99SBarry Smith Level: advanced 17547c6ae99SBarry Smith 176f73e5cebSJed Brown .seealso: DMCompositeGetEntries(), DMCompositeScatter() 17747c6ae99SBarry Smith @*/ 1787087cfbeSBarry Smith PetscErrorCode DMCompositeGetAccess(DM dm,Vec gvec,...) 17947c6ae99SBarry Smith { 18047c6ae99SBarry Smith va_list Argp; 18147c6ae99SBarry Smith PetscErrorCode ierr; 18247c6ae99SBarry Smith struct DMCompositeLink *next; 18347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 18447c6ae99SBarry Smith 18547c6ae99SBarry Smith PetscFunctionBegin; 18647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 18747c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 18847c6ae99SBarry Smith next = com->next; 18947c6ae99SBarry Smith if (!com->setup) { 190d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 19147c6ae99SBarry Smith } 19247c6ae99SBarry Smith 19347c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 19447c6ae99SBarry Smith va_start(Argp,gvec); 19547c6ae99SBarry Smith while (next) { 19647c6ae99SBarry Smith Vec *vec; 19747c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 1989ae5db72SJed Brown if (vec) { 1999ae5db72SJed Brown PetscScalar *array; 2009ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,vec);CHKERRQ(ierr); 2019ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 2029ae5db72SJed Brown ierr = VecPlaceArray(*vec,array+next->rstart);CHKERRQ(ierr); 2039ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 20447c6ae99SBarry Smith } 20547c6ae99SBarry Smith next = next->next; 20647c6ae99SBarry Smith } 20747c6ae99SBarry Smith va_end(Argp); 20847c6ae99SBarry Smith PetscFunctionReturn(0); 20947c6ae99SBarry Smith } 21047c6ae99SBarry Smith 21147c6ae99SBarry Smith #undef __FUNCT__ 212f73e5cebSJed Brown #define __FUNCT__ "DMCompositeGetAccessArray" 213f73e5cebSJed Brown /*@C 214f73e5cebSJed Brown DMCompositeGetAccessArray - Allows one to access the individual packed vectors in their global 215f73e5cebSJed Brown representation. 216f73e5cebSJed Brown 217f73e5cebSJed Brown Collective on DMComposite 218f73e5cebSJed Brown 219f73e5cebSJed Brown Input Parameters: 220f73e5cebSJed Brown + dm - the packer object 221f73e5cebSJed Brown . pvec - packed vector 222f73e5cebSJed Brown . nwanted - number of vectors wanted 2230298fd71SBarry Smith - wanted - sorted array of vectors wanted, or NULL to get all vectors 224f73e5cebSJed Brown 225f73e5cebSJed Brown Output Parameters: 226f73e5cebSJed Brown . vecs - array of requested global vectors (must be allocated) 227f73e5cebSJed Brown 228f73e5cebSJed Brown Notes: Use DMCompositeRestoreAccessArray() to return the vectors when you no longer need them 229f73e5cebSJed Brown 230f73e5cebSJed Brown Level: advanced 231f73e5cebSJed Brown 232f73e5cebSJed Brown .seealso: DMCompositeGetAccess(), DMCompositeGetEntries(), DMCompositeScatter(), DMCompositeGather() 233f73e5cebSJed Brown @*/ 234f73e5cebSJed Brown PetscErrorCode DMCompositeGetAccessArray(DM dm,Vec pvec,PetscInt nwanted,const PetscInt *wanted,Vec *vecs) 235f73e5cebSJed Brown { 236f73e5cebSJed Brown PetscErrorCode ierr; 237f73e5cebSJed Brown struct DMCompositeLink *link; 238f73e5cebSJed Brown PetscInt i,wnum; 239f73e5cebSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 240f73e5cebSJed Brown 241f73e5cebSJed Brown PetscFunctionBegin; 242f73e5cebSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 243f73e5cebSJed Brown PetscValidHeaderSpecific(pvec,VEC_CLASSID,2); 244f73e5cebSJed Brown if (!com->setup) { 245f73e5cebSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 246f73e5cebSJed Brown } 247f73e5cebSJed Brown 248f73e5cebSJed Brown for (i=0,wnum=0,link=com->next; link && wnum<nwanted; i++,link=link->next) { 249f73e5cebSJed Brown if (!wanted || i == wanted[wnum]) { 250f73e5cebSJed Brown PetscScalar *array; 251f73e5cebSJed Brown Vec v; 252f73e5cebSJed Brown ierr = DMGetGlobalVector(link->dm,&v);CHKERRQ(ierr); 253f73e5cebSJed Brown ierr = VecGetArray(pvec,&array);CHKERRQ(ierr); 254f73e5cebSJed Brown ierr = VecPlaceArray(v,array+link->rstart);CHKERRQ(ierr); 255f73e5cebSJed Brown ierr = VecRestoreArray(pvec,&array);CHKERRQ(ierr); 256f73e5cebSJed Brown vecs[wnum++] = v; 257f73e5cebSJed Brown } 258f73e5cebSJed Brown } 259f73e5cebSJed Brown PetscFunctionReturn(0); 260f73e5cebSJed Brown } 261f73e5cebSJed Brown 262f73e5cebSJed Brown #undef __FUNCT__ 26347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreAccess" 26447c6ae99SBarry Smith /*@C 265aa219208SBarry Smith DMCompositeRestoreAccess - Returns the vectors obtained with DMCompositeGetAccess() 26647c6ae99SBarry Smith representation. 26747c6ae99SBarry Smith 26847c6ae99SBarry Smith Collective on DMComposite 26947c6ae99SBarry Smith 2709ae5db72SJed Brown Input Parameters: 27147c6ae99SBarry Smith + dm - the packer object 27247c6ae99SBarry Smith . gvec - the global vector 2730298fd71SBarry Smith - Vec* ... - the individual parallel vectors, NULL for those that are not needed 27447c6ae99SBarry Smith 27547c6ae99SBarry Smith Level: advanced 27647c6ae99SBarry Smith 2779ae5db72SJed Brown .seealso DMCompositeAddDM(), DMCreateGlobalVector(), 2786eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeScatter(), 279aa219208SBarry Smith DMCompositeRestoreAccess(), DMCompositeGetAccess() 28047c6ae99SBarry Smith 28147c6ae99SBarry Smith @*/ 2827087cfbeSBarry Smith PetscErrorCode DMCompositeRestoreAccess(DM dm,Vec gvec,...) 28347c6ae99SBarry Smith { 28447c6ae99SBarry Smith va_list Argp; 28547c6ae99SBarry Smith PetscErrorCode ierr; 28647c6ae99SBarry Smith struct DMCompositeLink *next; 28747c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 28847c6ae99SBarry Smith 28947c6ae99SBarry Smith PetscFunctionBegin; 29047c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 29147c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 29247c6ae99SBarry Smith next = com->next; 29347c6ae99SBarry Smith if (!com->setup) { 294d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 29547c6ae99SBarry Smith } 29647c6ae99SBarry Smith 29747c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 29847c6ae99SBarry Smith va_start(Argp,gvec); 29947c6ae99SBarry Smith while (next) { 30047c6ae99SBarry Smith Vec *vec; 30147c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 3029ae5db72SJed Brown if (vec) { 3039ae5db72SJed Brown ierr = VecResetArray(*vec);CHKERRQ(ierr); 3049ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,vec);CHKERRQ(ierr); 30547c6ae99SBarry Smith } 30647c6ae99SBarry Smith next = next->next; 30747c6ae99SBarry Smith } 30847c6ae99SBarry Smith va_end(Argp); 30947c6ae99SBarry Smith PetscFunctionReturn(0); 31047c6ae99SBarry Smith } 31147c6ae99SBarry Smith 31247c6ae99SBarry Smith #undef __FUNCT__ 313f73e5cebSJed Brown #define __FUNCT__ "DMCompositeRestoreAccessArray" 314f73e5cebSJed Brown /*@C 315f73e5cebSJed Brown DMCompositeRestoreAccessArray - Returns the vectors obtained with DMCompositeGetAccessArray() 316f73e5cebSJed Brown 317f73e5cebSJed Brown Collective on DMComposite 318f73e5cebSJed Brown 319f73e5cebSJed Brown Input Parameters: 320f73e5cebSJed Brown + dm - the packer object 321f73e5cebSJed Brown . pvec - packed vector 322f73e5cebSJed Brown . nwanted - number of vectors wanted 3230298fd71SBarry Smith . wanted - sorted array of vectors wanted, or NULL to get all vectors 324f73e5cebSJed Brown - vecs - array of global vectors to return 325f73e5cebSJed Brown 326f73e5cebSJed Brown Level: advanced 327f73e5cebSJed Brown 328f73e5cebSJed Brown .seealso: DMCompositeRestoreAccess(), DMCompositeRestoreEntries(), DMCompositeScatter(), DMCompositeGather() 329f73e5cebSJed Brown @*/ 330f73e5cebSJed Brown PetscErrorCode DMCompositeRestoreAccessArray(DM dm,Vec pvec,PetscInt nwanted,const PetscInt *wanted,Vec *vecs) 331f73e5cebSJed Brown { 332f73e5cebSJed Brown PetscErrorCode ierr; 333f73e5cebSJed Brown struct DMCompositeLink *link; 334f73e5cebSJed Brown PetscInt i,wnum; 335f73e5cebSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 336f73e5cebSJed Brown 337f73e5cebSJed Brown PetscFunctionBegin; 338f73e5cebSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 339f73e5cebSJed Brown PetscValidHeaderSpecific(pvec,VEC_CLASSID,2); 340f73e5cebSJed Brown if (!com->setup) { 341f73e5cebSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 342f73e5cebSJed Brown } 343f73e5cebSJed Brown 344f73e5cebSJed Brown for (i=0,wnum=0,link=com->next; link && wnum<nwanted; i++,link=link->next) { 345f73e5cebSJed Brown if (!wanted || i == wanted[wnum]) { 346f73e5cebSJed Brown ierr = VecResetArray(vecs[wnum]);CHKERRQ(ierr); 347f73e5cebSJed Brown ierr = DMRestoreGlobalVector(link->dm,&vecs[wnum]);CHKERRQ(ierr); 348f73e5cebSJed Brown wnum++; 349f73e5cebSJed Brown } 350f73e5cebSJed Brown } 351f73e5cebSJed Brown PetscFunctionReturn(0); 352f73e5cebSJed Brown } 353f73e5cebSJed Brown 354f73e5cebSJed Brown #undef __FUNCT__ 35547c6ae99SBarry Smith #define __FUNCT__ "DMCompositeScatter" 35647c6ae99SBarry Smith /*@C 35747c6ae99SBarry Smith DMCompositeScatter - Scatters from a global packed vector into its individual local vectors 35847c6ae99SBarry Smith 35947c6ae99SBarry Smith Collective on DMComposite 36047c6ae99SBarry Smith 3619ae5db72SJed Brown Input Parameters: 36247c6ae99SBarry Smith + dm - the packer object 36347c6ae99SBarry Smith . gvec - the global vector 3640298fd71SBarry Smith - Vec ... - the individual sequential vectors, NULL for those that are not needed 36547c6ae99SBarry Smith 36647c6ae99SBarry Smith Level: advanced 36747c6ae99SBarry Smith 3686f3c3dcfSJed Brown Notes: 3696f3c3dcfSJed Brown DMCompositeScatterArray() is a non-variadic alternative that is often more convenient for library callers and is 3706f3c3dcfSJed Brown accessible from Fortran. 3716f3c3dcfSJed Brown 3729ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 3736eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 37447c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 3756f3c3dcfSJed Brown DMCompositeScatterArray() 37647c6ae99SBarry Smith 37747c6ae99SBarry Smith @*/ 3787087cfbeSBarry Smith PetscErrorCode DMCompositeScatter(DM dm,Vec gvec,...) 37947c6ae99SBarry Smith { 38047c6ae99SBarry Smith va_list Argp; 38147c6ae99SBarry Smith PetscErrorCode ierr; 38247c6ae99SBarry Smith struct DMCompositeLink *next; 3838fd8f222SJed Brown PetscInt cnt; 38447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 38547c6ae99SBarry Smith 38647c6ae99SBarry Smith PetscFunctionBegin; 38747c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 38847c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 38947c6ae99SBarry Smith if (!com->setup) { 390d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 39147c6ae99SBarry Smith } 39247c6ae99SBarry Smith 39347c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 39447c6ae99SBarry Smith va_start(Argp,gvec); 3958fd8f222SJed Brown for (cnt=3,next=com->next; next; cnt++,next=next->next) { 3969ae5db72SJed Brown Vec local; 3979ae5db72SJed Brown local = va_arg(Argp, Vec); 3989ae5db72SJed Brown if (local) { 3999ae5db72SJed Brown Vec global; 40047c6ae99SBarry Smith PetscScalar *array; 4019ae5db72SJed Brown PetscValidHeaderSpecific(local,VEC_CLASSID,cnt); 4029ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 4039ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 4049ae5db72SJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 4059ae5db72SJed Brown ierr = DMGlobalToLocalBegin(next->dm,global,INSERT_VALUES,local);CHKERRQ(ierr); 4069ae5db72SJed Brown ierr = DMGlobalToLocalEnd(next->dm,global,INSERT_VALUES,local);CHKERRQ(ierr); 4079ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 4089ae5db72SJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 4099ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 41047c6ae99SBarry Smith } 41147c6ae99SBarry Smith } 41247c6ae99SBarry Smith va_end(Argp); 41347c6ae99SBarry Smith PetscFunctionReturn(0); 41447c6ae99SBarry Smith } 41547c6ae99SBarry Smith 41647c6ae99SBarry Smith #undef __FUNCT__ 4176f3c3dcfSJed Brown #define __FUNCT__ "DMCompositeScatterArray" 4186f3c3dcfSJed Brown /*@ 4196f3c3dcfSJed Brown DMCompositeScatterArray - Scatters from a global packed vector into its individual local vectors 4206f3c3dcfSJed Brown 4216f3c3dcfSJed Brown Collective on DMComposite 4226f3c3dcfSJed Brown 4236f3c3dcfSJed Brown Input Parameters: 4246f3c3dcfSJed Brown + dm - the packer object 4256f3c3dcfSJed Brown . gvec - the global vector 4266f3c3dcfSJed Brown . lvecs - array of local vectors, NULL for any that are not needed 4276f3c3dcfSJed Brown 4286f3c3dcfSJed Brown Level: advanced 4296f3c3dcfSJed Brown 4306f3c3dcfSJed Brown Note: 4316f3c3dcfSJed Brown This is a non-variadic alternative to DMCompositeScatterArray() 4326f3c3dcfSJed Brown 4336f3c3dcfSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector() 4346f3c3dcfSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 4356f3c3dcfSJed Brown DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 4366f3c3dcfSJed Brown 4376f3c3dcfSJed Brown @*/ 4386f3c3dcfSJed Brown PetscErrorCode DMCompositeScatterArray(DM dm,Vec gvec,Vec *lvecs) 4396f3c3dcfSJed Brown { 4406f3c3dcfSJed Brown PetscErrorCode ierr; 4416f3c3dcfSJed Brown struct DMCompositeLink *next; 4426f3c3dcfSJed Brown PetscInt i; 4436f3c3dcfSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 4446f3c3dcfSJed Brown 4456f3c3dcfSJed Brown PetscFunctionBegin; 4466f3c3dcfSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 4476f3c3dcfSJed Brown PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 4486f3c3dcfSJed Brown if (!com->setup) { 4496f3c3dcfSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 4506f3c3dcfSJed Brown } 4516f3c3dcfSJed Brown 4526f3c3dcfSJed Brown /* loop over packed objects, handling one at at time */ 4536f3c3dcfSJed Brown for (i=0,next=com->next; next; next=next->next,i++) { 4546f3c3dcfSJed Brown if (lvecs[i]) { 4556f3c3dcfSJed Brown Vec global; 4566f3c3dcfSJed Brown PetscScalar *array; 4576f3c3dcfSJed Brown PetscValidHeaderSpecific(lvecs[i],VEC_CLASSID,3); 4586f3c3dcfSJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 4596f3c3dcfSJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 4606f3c3dcfSJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 4616f3c3dcfSJed Brown ierr = DMGlobalToLocalBegin(next->dm,global,INSERT_VALUES,lvecs[i]);CHKERRQ(ierr); 4626f3c3dcfSJed Brown ierr = DMGlobalToLocalEnd(next->dm,global,INSERT_VALUES,lvecs[i]);CHKERRQ(ierr); 4636f3c3dcfSJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 4646f3c3dcfSJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 4656f3c3dcfSJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 4666f3c3dcfSJed Brown } 4676f3c3dcfSJed Brown } 4686f3c3dcfSJed Brown PetscFunctionReturn(0); 4696f3c3dcfSJed Brown } 4706f3c3dcfSJed Brown 4716f3c3dcfSJed Brown #undef __FUNCT__ 47247c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGather" 47347c6ae99SBarry Smith /*@C 47447c6ae99SBarry Smith DMCompositeGather - Gathers into a global packed vector from its individual local vectors 47547c6ae99SBarry Smith 47647c6ae99SBarry Smith Collective on DMComposite 47747c6ae99SBarry Smith 47847c6ae99SBarry Smith Input Parameter: 47947c6ae99SBarry Smith + dm - the packer object 48047c6ae99SBarry Smith . gvec - the global vector 4810298fd71SBarry Smith - Vec ... - the individual sequential vectors, NULL for any that are not needed 48247c6ae99SBarry Smith 48347c6ae99SBarry Smith Level: advanced 48447c6ae99SBarry Smith 4859ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 4866eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 48747c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 48847c6ae99SBarry Smith 48947c6ae99SBarry Smith @*/ 4907087cfbeSBarry Smith PetscErrorCode DMCompositeGather(DM dm,Vec gvec,InsertMode imode,...) 49147c6ae99SBarry Smith { 49247c6ae99SBarry Smith va_list Argp; 49347c6ae99SBarry Smith PetscErrorCode ierr; 49447c6ae99SBarry Smith struct DMCompositeLink *next; 49547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 4968fd8f222SJed Brown PetscInt cnt; 49747c6ae99SBarry Smith 49847c6ae99SBarry Smith PetscFunctionBegin; 49947c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 50047c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 50147c6ae99SBarry Smith if (!com->setup) { 502d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 50347c6ae99SBarry Smith } 50447c6ae99SBarry Smith 50547c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 506df0c820aSJed Brown va_start(Argp,imode); 5078fd8f222SJed Brown for (cnt=3,next=com->next; next; cnt++,next=next->next) { 5089ae5db72SJed Brown Vec local; 5099ae5db72SJed Brown local = va_arg(Argp, Vec); 5109ae5db72SJed Brown if (local) { 51147c6ae99SBarry Smith PetscScalar *array; 5129ae5db72SJed Brown Vec global; 5139ae5db72SJed Brown PetscValidHeaderSpecific(local,VEC_CLASSID,cnt); 5149ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 5159ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 5169ae5db72SJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 5179ae5db72SJed Brown ierr = DMLocalToGlobalBegin(next->dm,local,imode,global);CHKERRQ(ierr); 5189ae5db72SJed Brown ierr = DMLocalToGlobalEnd(next->dm,local,imode,global);CHKERRQ(ierr); 5199ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 5209ae5db72SJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 5219ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 52247c6ae99SBarry Smith } 52347c6ae99SBarry Smith } 52447c6ae99SBarry Smith va_end(Argp); 52547c6ae99SBarry Smith PetscFunctionReturn(0); 52647c6ae99SBarry Smith } 52747c6ae99SBarry Smith 52847c6ae99SBarry Smith #undef __FUNCT__ 5296f3c3dcfSJed Brown #define __FUNCT__ "DMCompositeGatherArray" 5306f3c3dcfSJed Brown /*@ 5316f3c3dcfSJed Brown DMCompositeGatherArray - Gathers into a global packed vector from its individual local vectors 5326f3c3dcfSJed Brown 5336f3c3dcfSJed Brown Collective on DMComposite 5346f3c3dcfSJed Brown 5356f3c3dcfSJed Brown Input Parameter: 5366f3c3dcfSJed Brown + dm - the packer object 5376f3c3dcfSJed Brown . gvec - the global vector 5386f3c3dcfSJed Brown - lvecs - the individual sequential vectors, NULL for any that are not needed 5396f3c3dcfSJed Brown 5406f3c3dcfSJed Brown Level: advanced 5416f3c3dcfSJed Brown 5426f3c3dcfSJed Brown Notes: 5436f3c3dcfSJed Brown This is a non-variadic alternative to DMCompositeGather(). 5446f3c3dcfSJed Brown 5456f3c3dcfSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 5466f3c3dcfSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 5476f3c3dcfSJed Brown DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries(), 5486f3c3dcfSJed Brown @*/ 5496f3c3dcfSJed Brown PetscErrorCode DMCompositeGatherArray(DM dm,Vec gvec,InsertMode imode,Vec *lvecs) 5506f3c3dcfSJed Brown { 5516f3c3dcfSJed Brown PetscErrorCode ierr; 5526f3c3dcfSJed Brown struct DMCompositeLink *next; 5536f3c3dcfSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 5546f3c3dcfSJed Brown PetscInt i; 5556f3c3dcfSJed Brown 5566f3c3dcfSJed Brown PetscFunctionBegin; 5576f3c3dcfSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 5586f3c3dcfSJed Brown PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 5596f3c3dcfSJed Brown if (!com->setup) { 5606f3c3dcfSJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 5616f3c3dcfSJed Brown } 5626f3c3dcfSJed Brown 5636f3c3dcfSJed Brown /* loop over packed objects, handling one at at time */ 5646f3c3dcfSJed Brown for (next=com->next,i=0; next; next=next->next,i++) { 5656f3c3dcfSJed Brown if (lvecs[i]) { 5666f3c3dcfSJed Brown PetscScalar *array; 5676f3c3dcfSJed Brown Vec global; 5686f3c3dcfSJed Brown PetscValidHeaderSpecific(lvecs[i],VEC_CLASSID,3); 5696f3c3dcfSJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 5706f3c3dcfSJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 5716f3c3dcfSJed Brown ierr = VecPlaceArray(global,array+next->rstart);CHKERRQ(ierr); 5726f3c3dcfSJed Brown ierr = DMLocalToGlobalBegin(next->dm,lvecs[i],imode,global);CHKERRQ(ierr); 5736f3c3dcfSJed Brown ierr = DMLocalToGlobalEnd(next->dm,lvecs[i],imode,global);CHKERRQ(ierr); 5746f3c3dcfSJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 5756f3c3dcfSJed Brown ierr = VecResetArray(global);CHKERRQ(ierr); 5766f3c3dcfSJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 5776f3c3dcfSJed Brown } 5786f3c3dcfSJed Brown } 5796f3c3dcfSJed Brown PetscFunctionReturn(0); 5806f3c3dcfSJed Brown } 5816f3c3dcfSJed Brown 5826f3c3dcfSJed Brown #undef __FUNCT__ 58347c6ae99SBarry Smith #define __FUNCT__ "DMCompositeAddDM" 58447c6ae99SBarry Smith /*@C 585aa219208SBarry Smith DMCompositeAddDM - adds a DM vector to a DMComposite 58647c6ae99SBarry Smith 58747c6ae99SBarry Smith Collective on DMComposite 58847c6ae99SBarry Smith 58947c6ae99SBarry Smith Input Parameter: 59047c6ae99SBarry Smith + dm - the packer object 59147c6ae99SBarry Smith - dm - the DM object, if the DM is a da you will need to caste it with a (DM) 59247c6ae99SBarry Smith 59347c6ae99SBarry Smith Level: advanced 59447c6ae99SBarry Smith 5950c010503SBarry Smith .seealso DMDestroy(), DMCompositeGather(), DMCompositeAddDM(), DMCreateGlobalVector(), 5966eb61c8cSJed Brown DMCompositeScatter(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 59747c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 59847c6ae99SBarry Smith 59947c6ae99SBarry Smith @*/ 6007087cfbeSBarry Smith PetscErrorCode DMCompositeAddDM(DM dmc,DM dm) 60147c6ae99SBarry Smith { 60247c6ae99SBarry Smith PetscErrorCode ierr; 60306ebdd98SJed Brown PetscInt n,nlocal; 60447c6ae99SBarry Smith struct DMCompositeLink *mine,*next; 60506ebdd98SJed Brown Vec global,local; 60647c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dmc->data; 60747c6ae99SBarry Smith 60847c6ae99SBarry Smith PetscFunctionBegin; 60947c6ae99SBarry Smith PetscValidHeaderSpecific(dmc,DM_CLASSID,1); 61047c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,2); 61147c6ae99SBarry Smith next = com->next; 612ce94432eSBarry Smith if (com->setup) SETERRQ(PetscObjectComm((PetscObject)dmc),PETSC_ERR_ARG_WRONGSTATE,"Cannot add a DM once you have used the DMComposite"); 61347c6ae99SBarry Smith 61447c6ae99SBarry Smith /* create new link */ 615b00a9115SJed Brown ierr = PetscNew(&mine);CHKERRQ(ierr); 61647c6ae99SBarry Smith ierr = PetscObjectReference((PetscObject)dm);CHKERRQ(ierr); 61747c6ae99SBarry Smith ierr = DMGetGlobalVector(dm,&global);CHKERRQ(ierr); 61847c6ae99SBarry Smith ierr = VecGetLocalSize(global,&n);CHKERRQ(ierr); 61947c6ae99SBarry Smith ierr = DMRestoreGlobalVector(dm,&global);CHKERRQ(ierr); 62006ebdd98SJed Brown ierr = DMGetLocalVector(dm,&local);CHKERRQ(ierr); 62106ebdd98SJed Brown ierr = VecGetSize(local,&nlocal);CHKERRQ(ierr); 62206ebdd98SJed Brown ierr = DMRestoreLocalVector(dm,&local);CHKERRQ(ierr); 6238865f1eaSKarl Rupp 62447c6ae99SBarry Smith mine->n = n; 62506ebdd98SJed Brown mine->nlocal = nlocal; 62647c6ae99SBarry Smith mine->dm = dm; 6270298fd71SBarry Smith mine->next = NULL; 62847c6ae99SBarry Smith com->n += n; 62947c6ae99SBarry Smith 63047c6ae99SBarry Smith /* add to end of list */ 6318865f1eaSKarl Rupp if (!next) com->next = mine; 6328865f1eaSKarl Rupp else { 63347c6ae99SBarry Smith while (next->next) next = next->next; 63447c6ae99SBarry Smith next->next = mine; 63547c6ae99SBarry Smith } 63647c6ae99SBarry Smith com->nDM++; 63747c6ae99SBarry Smith com->nmine++; 63847c6ae99SBarry Smith PetscFunctionReturn(0); 63947c6ae99SBarry Smith } 64047c6ae99SBarry Smith 6419804daf3SBarry Smith #include <petscdraw.h> 64226887b52SJed Brown PETSC_EXTERN PetscErrorCode VecView_MPI(Vec,PetscViewer); 64347c6ae99SBarry Smith #undef __FUNCT__ 64447c6ae99SBarry Smith #define __FUNCT__ "VecView_DMComposite" 6457087cfbeSBarry Smith PetscErrorCode VecView_DMComposite(Vec gvec,PetscViewer viewer) 64647c6ae99SBarry Smith { 64747c6ae99SBarry Smith DM dm; 64847c6ae99SBarry Smith PetscErrorCode ierr; 64947c6ae99SBarry Smith struct DMCompositeLink *next; 65047c6ae99SBarry Smith PetscBool isdraw; 651cef07954SSatish Balay DM_Composite *com; 65247c6ae99SBarry Smith 65347c6ae99SBarry Smith PetscFunctionBegin; 654c688c046SMatthew G Knepley ierr = VecGetDM(gvec, &dm);CHKERRQ(ierr); 655ce94432eSBarry Smith if (!dm) SETERRQ(PetscObjectComm((PetscObject)gvec),PETSC_ERR_ARG_WRONG,"Vector not generated from a DMComposite"); 65647c6ae99SBarry Smith com = (DM_Composite*)dm->data; 65747c6ae99SBarry Smith next = com->next; 65847c6ae99SBarry Smith 659251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr); 66047c6ae99SBarry Smith if (!isdraw) { 66147c6ae99SBarry Smith /* do I really want to call this? */ 66247c6ae99SBarry Smith ierr = VecView_MPI(gvec,viewer);CHKERRQ(ierr); 66347c6ae99SBarry Smith } else { 66447c6ae99SBarry Smith PetscInt cnt = 0; 66547c6ae99SBarry Smith 66647c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 66747c6ae99SBarry Smith while (next) { 66847c6ae99SBarry Smith Vec vec; 6699ae5db72SJed Brown PetscScalar *array; 67047c6ae99SBarry Smith PetscInt bs; 67147c6ae99SBarry Smith 6729ae5db72SJed Brown /* Should use VecGetSubVector() eventually, but would need to forward the DM for that to work */ 6739ae5db72SJed Brown ierr = DMGetGlobalVector(next->dm,&vec);CHKERRQ(ierr); 6749ae5db72SJed Brown ierr = VecGetArray(gvec,&array);CHKERRQ(ierr); 6759ae5db72SJed Brown ierr = VecPlaceArray(vec,array+next->rstart);CHKERRQ(ierr); 6769ae5db72SJed Brown ierr = VecRestoreArray(gvec,&array);CHKERRQ(ierr); 67747c6ae99SBarry Smith ierr = VecView(vec,viewer);CHKERRQ(ierr); 67847c6ae99SBarry Smith ierr = VecGetBlockSize(vec,&bs);CHKERRQ(ierr); 6799ae5db72SJed Brown ierr = VecResetArray(vec);CHKERRQ(ierr); 6809ae5db72SJed Brown ierr = DMRestoreGlobalVector(next->dm,&vec);CHKERRQ(ierr); 68147c6ae99SBarry Smith ierr = PetscViewerDrawBaseAdd(viewer,bs);CHKERRQ(ierr); 68247c6ae99SBarry Smith cnt += bs; 68347c6ae99SBarry Smith next = next->next; 68447c6ae99SBarry Smith } 68547c6ae99SBarry Smith ierr = PetscViewerDrawBaseAdd(viewer,-cnt);CHKERRQ(ierr); 68647c6ae99SBarry Smith } 68747c6ae99SBarry Smith PetscFunctionReturn(0); 68847c6ae99SBarry Smith } 68947c6ae99SBarry Smith 69047c6ae99SBarry Smith #undef __FUNCT__ 6910c010503SBarry Smith #define __FUNCT__ "DMCreateGlobalVector_Composite" 6927087cfbeSBarry Smith PetscErrorCode DMCreateGlobalVector_Composite(DM dm,Vec *gvec) 69347c6ae99SBarry Smith { 69447c6ae99SBarry Smith PetscErrorCode ierr; 69547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 69647c6ae99SBarry Smith 69747c6ae99SBarry Smith PetscFunctionBegin; 69847c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 699d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 700ce94432eSBarry Smith ierr = VecCreateMPI(PetscObjectComm((PetscObject)dm),com->n,com->N,gvec);CHKERRQ(ierr); 701c688c046SMatthew G Knepley ierr = VecSetDM(*gvec, dm);CHKERRQ(ierr); 70247c6ae99SBarry Smith ierr = VecSetOperation(*gvec,VECOP_VIEW,(void (*)(void))VecView_DMComposite);CHKERRQ(ierr); 70347c6ae99SBarry Smith PetscFunctionReturn(0); 70447c6ae99SBarry Smith } 70547c6ae99SBarry Smith 70647c6ae99SBarry Smith #undef __FUNCT__ 7070c010503SBarry Smith #define __FUNCT__ "DMCreateLocalVector_Composite" 7087087cfbeSBarry Smith PetscErrorCode DMCreateLocalVector_Composite(DM dm,Vec *lvec) 70947c6ae99SBarry Smith { 71047c6ae99SBarry Smith PetscErrorCode ierr; 71147c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 71247c6ae99SBarry Smith 71347c6ae99SBarry Smith PetscFunctionBegin; 71447c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 71547c6ae99SBarry Smith if (!com->setup) { 716d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 71747c6ae99SBarry Smith } 718ce94432eSBarry Smith ierr = VecCreateSeq(PetscObjectComm((PetscObject)dm),com->nghost,lvec);CHKERRQ(ierr); 719c688c046SMatthew G Knepley ierr = VecSetDM(*lvec, dm);CHKERRQ(ierr); 72047c6ae99SBarry Smith PetscFunctionReturn(0); 72147c6ae99SBarry Smith } 72247c6ae99SBarry Smith 72347c6ae99SBarry Smith #undef __FUNCT__ 7246eb61c8cSJed Brown #define __FUNCT__ "DMCompositeGetISLocalToGlobalMappings" 72547c6ae99SBarry Smith /*@C 7269ae5db72SJed Brown DMCompositeGetISLocalToGlobalMappings - gets an ISLocalToGlobalMapping for each DM in the DMComposite, maps to the composite global space 72747c6ae99SBarry Smith 72806ebdd98SJed Brown Collective on DM 72947c6ae99SBarry Smith 73047c6ae99SBarry Smith Input Parameter: 73147c6ae99SBarry Smith . dm - the packer object 73247c6ae99SBarry Smith 73347c6ae99SBarry Smith Output Parameters: 7349ae5db72SJed Brown . ltogs - the individual mappings for each packed vector. Note that this includes 7359ae5db72SJed Brown all the ghost points that individual ghosted DMDA's may have. 73647c6ae99SBarry Smith 73747c6ae99SBarry Smith Level: advanced 73847c6ae99SBarry Smith 73947c6ae99SBarry Smith Notes: 7406eb61c8cSJed Brown Each entry of ltogs should be destroyed with ISLocalToGlobalMappingDestroy(), the ltogs array should be freed with PetscFree(). 74147c6ae99SBarry Smith 7429ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 74347c6ae99SBarry Smith DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(), 74447c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries() 74547c6ae99SBarry Smith 74647c6ae99SBarry Smith @*/ 7477087cfbeSBarry Smith PetscErrorCode DMCompositeGetISLocalToGlobalMappings(DM dm,ISLocalToGlobalMapping **ltogs) 74847c6ae99SBarry Smith { 74947c6ae99SBarry Smith PetscErrorCode ierr; 75047c6ae99SBarry Smith PetscInt i,*idx,n,cnt; 75147c6ae99SBarry Smith struct DMCompositeLink *next; 75247c6ae99SBarry Smith PetscMPIInt rank; 75347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 75447c6ae99SBarry Smith 75547c6ae99SBarry Smith PetscFunctionBegin; 75647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 757728e99d6SJed Brown ierr = DMSetUp(dm);CHKERRQ(ierr); 758854ce69bSBarry Smith ierr = PetscMalloc1(com->nDM,ltogs);CHKERRQ(ierr); 75947c6ae99SBarry Smith next = com->next; 760ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 76147c6ae99SBarry Smith 76247c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 76347c6ae99SBarry Smith cnt = 0; 76447c6ae99SBarry Smith while (next) { 7656eb61c8cSJed Brown ISLocalToGlobalMapping ltog; 7666eb61c8cSJed Brown PetscMPIInt size; 76786994e45SJed Brown const PetscInt *suboff,*indices; 7686eb61c8cSJed Brown Vec global; 76947c6ae99SBarry Smith 7706eb61c8cSJed Brown /* Get sub-DM global indices for each local dof */ 7711411c6eeSJed Brown ierr = DMGetLocalToGlobalMapping(next->dm,<og);CHKERRQ(ierr); 7726eb61c8cSJed Brown ierr = ISLocalToGlobalMappingGetSize(ltog,&n);CHKERRQ(ierr); 77386994e45SJed Brown ierr = ISLocalToGlobalMappingGetIndices(ltog,&indices);CHKERRQ(ierr); 774785e854fSJed Brown ierr = PetscMalloc1(n,&idx);CHKERRQ(ierr); 77547c6ae99SBarry Smith 7766eb61c8cSJed Brown /* Get the offsets for the sub-DM global vector */ 7776eb61c8cSJed Brown ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 7786eb61c8cSJed Brown ierr = VecGetOwnershipRanges(global,&suboff);CHKERRQ(ierr); 779ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)global),&size);CHKERRQ(ierr); 7806eb61c8cSJed Brown 7816eb61c8cSJed Brown /* Shift the sub-DM definition of the global space to the composite global space */ 7826eb61c8cSJed Brown for (i=0; i<n; i++) { 78386994e45SJed Brown PetscInt subi = indices[i],lo = 0,hi = size,t; 7846eb61c8cSJed Brown /* Binary search to find which rank owns subi */ 7856eb61c8cSJed Brown while (hi-lo > 1) { 7866eb61c8cSJed Brown t = lo + (hi-lo)/2; 7876eb61c8cSJed Brown if (suboff[t] > subi) hi = t; 7886eb61c8cSJed Brown else lo = t; 7896eb61c8cSJed Brown } 7906eb61c8cSJed Brown idx[i] = subi - suboff[lo] + next->grstarts[lo]; 7916eb61c8cSJed Brown } 79286994e45SJed Brown ierr = ISLocalToGlobalMappingRestoreIndices(ltog,&indices);CHKERRQ(ierr); 793f0413b6fSBarry Smith ierr = ISLocalToGlobalMappingCreate(PetscObjectComm((PetscObject)dm),1,n,idx,PETSC_OWN_POINTER,&(*ltogs)[cnt]);CHKERRQ(ierr); 7946eb61c8cSJed Brown ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 79547c6ae99SBarry Smith next = next->next; 79647c6ae99SBarry Smith cnt++; 79747c6ae99SBarry Smith } 79847c6ae99SBarry Smith PetscFunctionReturn(0); 79947c6ae99SBarry Smith } 80047c6ae99SBarry Smith 80147c6ae99SBarry Smith #undef __FUNCT__ 80287c85e80SJed Brown #define __FUNCT__ "DMCompositeGetLocalISs" 80387c85e80SJed Brown /*@C 8049ae5db72SJed Brown DMCompositeGetLocalISs - Gets index sets for each component of a composite local vector 80587c85e80SJed Brown 80687c85e80SJed Brown Not Collective 80787c85e80SJed Brown 80887c85e80SJed Brown Input Arguments: 80987c85e80SJed Brown . dm - composite DM 81087c85e80SJed Brown 81187c85e80SJed Brown Output Arguments: 81287c85e80SJed Brown . is - array of serial index sets for each each component of the DMComposite 81387c85e80SJed Brown 81487c85e80SJed Brown Level: intermediate 81587c85e80SJed Brown 81687c85e80SJed Brown Notes: 81787c85e80SJed Brown At present, a composite local vector does not normally exist. This function is used to provide index sets for 81887c85e80SJed Brown MatGetLocalSubMatrix(). In the future, the scatters for each entry in the DMComposite may be be merged into a single 8199ae5db72SJed Brown scatter to a composite local vector. The user should not typically need to know which is being done. 82087c85e80SJed Brown 82187c85e80SJed Brown To get the composite global indices at all local points (including ghosts), use DMCompositeGetISLocalToGlobalMappings(). 82287c85e80SJed Brown 82387c85e80SJed Brown To get index sets for pieces of the composite global vector, use DMCompositeGetGlobalISs(). 82487c85e80SJed Brown 82587c85e80SJed Brown Each returned IS should be destroyed with ISDestroy(), the array should be freed with PetscFree(). 82687c85e80SJed Brown 82787c85e80SJed Brown .seealso: DMCompositeGetGlobalISs(), DMCompositeGetISLocalToGlobalMappings(), MatGetLocalSubMatrix(), MatCreateLocalRef() 82887c85e80SJed Brown @*/ 8297087cfbeSBarry Smith PetscErrorCode DMCompositeGetLocalISs(DM dm,IS **is) 83087c85e80SJed Brown { 83187c85e80SJed Brown PetscErrorCode ierr; 83287c85e80SJed Brown DM_Composite *com = (DM_Composite*)dm->data; 83387c85e80SJed Brown struct DMCompositeLink *link; 83487c85e80SJed Brown PetscInt cnt,start; 83587c85e80SJed Brown 83687c85e80SJed Brown PetscFunctionBegin; 83787c85e80SJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 83887c85e80SJed Brown PetscValidPointer(is,2); 839785e854fSJed Brown ierr = PetscMalloc1(com->nmine,is);CHKERRQ(ierr); 84006ebdd98SJed Brown for (cnt=0,start=0,link=com->next; link; start+=link->nlocal,cnt++,link=link->next) { 841520db06cSJed Brown PetscInt bs; 8429ae5db72SJed Brown ierr = ISCreateStride(PETSC_COMM_SELF,link->nlocal,start,1,&(*is)[cnt]);CHKERRQ(ierr); 8431411c6eeSJed Brown ierr = DMGetBlockSize(link->dm,&bs);CHKERRQ(ierr); 844520db06cSJed Brown ierr = ISSetBlockSize((*is)[cnt],bs);CHKERRQ(ierr); 845520db06cSJed Brown } 84687c85e80SJed Brown PetscFunctionReturn(0); 84787c85e80SJed Brown } 84887c85e80SJed Brown 84987c85e80SJed Brown #undef __FUNCT__ 85047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetGlobalISs" 85147c6ae99SBarry Smith /*@C 85247c6ae99SBarry Smith DMCompositeGetGlobalISs - Gets the index sets for each composed object 85347c6ae99SBarry Smith 85447c6ae99SBarry Smith Collective on DMComposite 85547c6ae99SBarry Smith 85647c6ae99SBarry Smith Input Parameter: 85747c6ae99SBarry Smith . dm - the packer object 85847c6ae99SBarry Smith 85947c6ae99SBarry Smith Output Parameters: 86047c6ae99SBarry Smith . is - the array of index sets 86147c6ae99SBarry Smith 86247c6ae99SBarry Smith Level: advanced 86347c6ae99SBarry Smith 86447c6ae99SBarry Smith Notes: 86547c6ae99SBarry Smith The is entries should be destroyed with ISDestroy(), the is array should be freed with PetscFree() 86647c6ae99SBarry Smith 86747c6ae99SBarry Smith These could be used to extract a subset of vector entries for a "multi-physics" preconditioner 86847c6ae99SBarry Smith 8696eb61c8cSJed Brown Use DMCompositeGetLocalISs() for index sets in the packed local numbering, and 8706eb61c8cSJed Brown DMCompositeGetISLocalToGlobalMappings() for to map local sub-DM (including ghost) indices to packed global 8716eb61c8cSJed Brown indices. 87247c6ae99SBarry Smith 8739ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 87447c6ae99SBarry Smith DMCompositeGather(), DMCompositeCreate(), DMCompositeGetAccess(), DMCompositeScatter(), 87547c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(),DMCompositeGetEntries() 87647c6ae99SBarry Smith 87747c6ae99SBarry Smith @*/ 8786eb61c8cSJed Brown 8797087cfbeSBarry Smith PetscErrorCode DMCompositeGetGlobalISs(DM dm,IS *is[]) 88047c6ae99SBarry Smith { 88147c6ae99SBarry Smith PetscErrorCode ierr; 88266bb578eSMark Adams PetscInt cnt = 0; 88347c6ae99SBarry Smith struct DMCompositeLink *next; 88447c6ae99SBarry Smith PetscMPIInt rank; 88547c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 88647c6ae99SBarry Smith 88747c6ae99SBarry Smith PetscFunctionBegin; 88847c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 889854ce69bSBarry Smith ierr = PetscMalloc1(com->nDM,is);CHKERRQ(ierr); 89047c6ae99SBarry Smith next = com->next; 891ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 89247c6ae99SBarry Smith 89347c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 89447c6ae99SBarry Smith while (next) { 89566bb578eSMark Adams ierr = ISCreateStride(PetscObjectComm((PetscObject)dm),next->n,next->grstart,1,&(*is)[cnt]);CHKERRQ(ierr); 8960f21e855SMatthew G. Knepley if (dm->prob) { 89765c226d8SMatthew G. Knepley MatNullSpace space; 89865c226d8SMatthew G. Knepley Mat pmat; 8990f21e855SMatthew G. Knepley PetscObject disc; 9000f21e855SMatthew G. Knepley PetscInt Nf; 90165c226d8SMatthew G. Knepley 9022764a2aaSMatthew G. Knepley ierr = PetscDSGetNumFields(dm->prob, &Nf);CHKERRQ(ierr); 903f24dd8d2SMatthew G. Knepley if (cnt < Nf) { 9042764a2aaSMatthew G. Knepley ierr = PetscDSGetDiscretization(dm->prob, cnt, &disc);CHKERRQ(ierr); 9050f21e855SMatthew G. Knepley ierr = PetscObjectQuery(disc, "nullspace", (PetscObject*) &space);CHKERRQ(ierr); 906aac2dd2dSMatthew G. Knepley if (space) {ierr = PetscObjectCompose((PetscObject) (*is)[cnt], "nullspace", (PetscObject) space);CHKERRQ(ierr);} 9070f21e855SMatthew G. Knepley ierr = PetscObjectQuery(disc, "nearnullspace", (PetscObject*) &space);CHKERRQ(ierr); 908aac2dd2dSMatthew G. Knepley if (space) {ierr = PetscObjectCompose((PetscObject) (*is)[cnt], "nearnullspace", (PetscObject) space);CHKERRQ(ierr);} 9090f21e855SMatthew G. Knepley ierr = PetscObjectQuery(disc, "pmat", (PetscObject*) &pmat);CHKERRQ(ierr); 910aac2dd2dSMatthew G. Knepley if (pmat) {ierr = PetscObjectCompose((PetscObject) (*is)[cnt], "pmat", (PetscObject) pmat);CHKERRQ(ierr);} 91165c226d8SMatthew G. Knepley } 912f24dd8d2SMatthew G. Knepley } 91347c6ae99SBarry Smith cnt++; 91447c6ae99SBarry Smith next = next->next; 91547c6ae99SBarry Smith } 91647c6ae99SBarry Smith PetscFunctionReturn(0); 91747c6ae99SBarry Smith } 91847c6ae99SBarry Smith 9194d343eeaSMatthew G Knepley #undef __FUNCT__ 9204d343eeaSMatthew G Knepley #define __FUNCT__ "DMCreateFieldIS_Composite" 92121c9b008SJed Brown PetscErrorCode DMCreateFieldIS_Composite(DM dm, PetscInt *numFields,char ***fieldNames, IS **fields) 9224d343eeaSMatthew G Knepley { 9234d343eeaSMatthew G Knepley PetscInt nDM; 9244d343eeaSMatthew G Knepley DM *dms; 9254d343eeaSMatthew G Knepley PetscInt i; 9264d343eeaSMatthew G Knepley PetscErrorCode ierr; 9274d343eeaSMatthew G Knepley 9284d343eeaSMatthew G Knepley PetscFunctionBegin; 9294d343eeaSMatthew G Knepley ierr = DMCompositeGetNumberDM(dm, &nDM);CHKERRQ(ierr); 9308865f1eaSKarl Rupp if (numFields) *numFields = nDM; 9314d343eeaSMatthew G Knepley ierr = DMCompositeGetGlobalISs(dm, fields);CHKERRQ(ierr); 9324d343eeaSMatthew G Knepley if (fieldNames) { 933785e854fSJed Brown ierr = PetscMalloc1(nDM, &dms);CHKERRQ(ierr); 934785e854fSJed Brown ierr = PetscMalloc1(nDM, fieldNames);CHKERRQ(ierr); 9354d343eeaSMatthew G Knepley ierr = DMCompositeGetEntriesArray(dm, dms);CHKERRQ(ierr); 9364d343eeaSMatthew G Knepley for (i=0; i<nDM; i++) { 9374d343eeaSMatthew G Knepley char buf[256]; 9384d343eeaSMatthew G Knepley const char *splitname; 9394d343eeaSMatthew G Knepley 9404d343eeaSMatthew G Knepley /* Split naming precedence: object name, prefix, number */ 9414d343eeaSMatthew G Knepley splitname = ((PetscObject) dm)->name; 9424d343eeaSMatthew G Knepley if (!splitname) { 9434d343eeaSMatthew G Knepley ierr = PetscObjectGetOptionsPrefix((PetscObject)dms[i],&splitname);CHKERRQ(ierr); 9444d343eeaSMatthew G Knepley if (splitname) { 9454d343eeaSMatthew G Knepley size_t len; 9468caf3d72SBarry Smith ierr = PetscStrncpy(buf,splitname,sizeof(buf));CHKERRQ(ierr); 9478caf3d72SBarry Smith buf[sizeof(buf) - 1] = 0; 9484d343eeaSMatthew G Knepley ierr = PetscStrlen(buf,&len);CHKERRQ(ierr); 9494d343eeaSMatthew G Knepley if (buf[len-1] == '_') buf[len-1] = 0; /* Remove trailing underscore if it was used */ 9504d343eeaSMatthew G Knepley splitname = buf; 9514d343eeaSMatthew G Knepley } 9524d343eeaSMatthew G Knepley } 9534d343eeaSMatthew G Knepley if (!splitname) { 9548caf3d72SBarry Smith ierr = PetscSNPrintf(buf,sizeof(buf),"%D",i);CHKERRQ(ierr); 9554d343eeaSMatthew G Knepley splitname = buf; 9564d343eeaSMatthew G Knepley } 95721c9b008SJed Brown ierr = PetscStrallocpy(splitname,&(*fieldNames)[i]);CHKERRQ(ierr); 9584d343eeaSMatthew G Knepley } 9594d343eeaSMatthew G Knepley ierr = PetscFree(dms);CHKERRQ(ierr); 9604d343eeaSMatthew G Knepley } 9614d343eeaSMatthew G Knepley PetscFunctionReturn(0); 9624d343eeaSMatthew G Knepley } 9634d343eeaSMatthew G Knepley 964e7c4fc90SDmitry Karpeev /* 965e7c4fc90SDmitry Karpeev This could take over from DMCreateFieldIS(), as it is more general, 9660298fd71SBarry Smith making DMCreateFieldIS() a special case -- calling with dmlist == NULL; 967e7c4fc90SDmitry Karpeev At this point it's probably best to be less intrusive, however. 968e7c4fc90SDmitry Karpeev */ 969e7c4fc90SDmitry Karpeev #undef __FUNCT__ 97016621825SDmitry Karpeev #define __FUNCT__ "DMCreateFieldDecomposition_Composite" 97116621825SDmitry Karpeev PetscErrorCode DMCreateFieldDecomposition_Composite(DM dm, PetscInt *len,char ***namelist, IS **islist, DM **dmlist) 972e7c4fc90SDmitry Karpeev { 973e7c4fc90SDmitry Karpeev PetscInt nDM; 974e7c4fc90SDmitry Karpeev PetscInt i; 975e7c4fc90SDmitry Karpeev PetscErrorCode ierr; 976e7c4fc90SDmitry Karpeev 977e7c4fc90SDmitry Karpeev PetscFunctionBegin; 978e7c4fc90SDmitry Karpeev ierr = DMCreateFieldIS_Composite(dm, len, namelist, islist);CHKERRQ(ierr); 979e7c4fc90SDmitry Karpeev if (dmlist) { 980e7c4fc90SDmitry Karpeev ierr = DMCompositeGetNumberDM(dm, &nDM);CHKERRQ(ierr); 981785e854fSJed Brown ierr = PetscMalloc1(nDM, dmlist);CHKERRQ(ierr); 982e7c4fc90SDmitry Karpeev ierr = DMCompositeGetEntriesArray(dm, *dmlist);CHKERRQ(ierr); 983e7c4fc90SDmitry Karpeev for (i=0; i<nDM; i++) { 984e7c4fc90SDmitry Karpeev ierr = PetscObjectReference((PetscObject)((*dmlist)[i]));CHKERRQ(ierr); 985e7c4fc90SDmitry Karpeev } 986e7c4fc90SDmitry Karpeev } 987e7c4fc90SDmitry Karpeev PetscFunctionReturn(0); 988e7c4fc90SDmitry Karpeev } 989e7c4fc90SDmitry Karpeev 990e7c4fc90SDmitry Karpeev 991e7c4fc90SDmitry Karpeev 99247c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 99347c6ae99SBarry Smith #undef __FUNCT__ 99447c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetLocalVectors" 99547c6ae99SBarry Smith /*@C 9969ae5db72SJed Brown DMCompositeGetLocalVectors - Gets local vectors for each part of a DMComposite. 99747c6ae99SBarry Smith Use DMCompositeRestoreLocalVectors() to return them. 99847c6ae99SBarry Smith 99947c6ae99SBarry Smith Not Collective 100047c6ae99SBarry Smith 100147c6ae99SBarry Smith Input Parameter: 100247c6ae99SBarry Smith . dm - the packer object 100347c6ae99SBarry Smith 100447c6ae99SBarry Smith Output Parameter: 10059ae5db72SJed Brown . Vec ... - the individual sequential Vecs 100647c6ae99SBarry Smith 100747c6ae99SBarry Smith Level: advanced 100847c6ae99SBarry Smith 10099ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 10106eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 101147c6ae99SBarry Smith DMCompositeRestoreLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries() 101247c6ae99SBarry Smith 101347c6ae99SBarry Smith @*/ 10147087cfbeSBarry Smith PetscErrorCode DMCompositeGetLocalVectors(DM dm,...) 101547c6ae99SBarry Smith { 101647c6ae99SBarry Smith va_list Argp; 101747c6ae99SBarry Smith PetscErrorCode ierr; 101847c6ae99SBarry Smith struct DMCompositeLink *next; 101947c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 102047c6ae99SBarry Smith 102147c6ae99SBarry Smith PetscFunctionBegin; 102247c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 102347c6ae99SBarry Smith next = com->next; 102447c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 102547c6ae99SBarry Smith va_start(Argp,dm); 102647c6ae99SBarry Smith while (next) { 102747c6ae99SBarry Smith Vec *vec; 102847c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 102906930112SJed Brown if (vec) {ierr = DMGetLocalVector(next->dm,vec);CHKERRQ(ierr);} 103047c6ae99SBarry Smith next = next->next; 103147c6ae99SBarry Smith } 103247c6ae99SBarry Smith va_end(Argp); 103347c6ae99SBarry Smith PetscFunctionReturn(0); 103447c6ae99SBarry Smith } 103547c6ae99SBarry Smith 103647c6ae99SBarry Smith #undef __FUNCT__ 103747c6ae99SBarry Smith #define __FUNCT__ "DMCompositeRestoreLocalVectors" 103847c6ae99SBarry Smith /*@C 10399ae5db72SJed Brown DMCompositeRestoreLocalVectors - Restores local vectors for each part of a DMComposite. 104047c6ae99SBarry Smith 104147c6ae99SBarry Smith Not Collective 104247c6ae99SBarry Smith 104347c6ae99SBarry Smith Input Parameter: 104447c6ae99SBarry Smith . dm - the packer object 104547c6ae99SBarry Smith 104647c6ae99SBarry Smith Output Parameter: 10479ae5db72SJed Brown . Vec ... - the individual sequential Vecs 104847c6ae99SBarry Smith 104947c6ae99SBarry Smith Level: advanced 105047c6ae99SBarry Smith 10519ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), 10526eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 105347c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeScatter(), DMCompositeGetEntries() 105447c6ae99SBarry Smith 105547c6ae99SBarry Smith @*/ 10567087cfbeSBarry Smith PetscErrorCode DMCompositeRestoreLocalVectors(DM dm,...) 105747c6ae99SBarry Smith { 105847c6ae99SBarry Smith va_list Argp; 105947c6ae99SBarry Smith PetscErrorCode ierr; 106047c6ae99SBarry Smith struct DMCompositeLink *next; 106147c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 106247c6ae99SBarry Smith 106347c6ae99SBarry Smith PetscFunctionBegin; 106447c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 106547c6ae99SBarry Smith next = com->next; 106647c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 106747c6ae99SBarry Smith va_start(Argp,dm); 106847c6ae99SBarry Smith while (next) { 106947c6ae99SBarry Smith Vec *vec; 107047c6ae99SBarry Smith vec = va_arg(Argp, Vec*); 107106930112SJed Brown if (vec) {ierr = DMRestoreLocalVector(next->dm,vec);CHKERRQ(ierr);} 107247c6ae99SBarry Smith next = next->next; 107347c6ae99SBarry Smith } 107447c6ae99SBarry Smith va_end(Argp); 107547c6ae99SBarry Smith PetscFunctionReturn(0); 107647c6ae99SBarry Smith } 107747c6ae99SBarry Smith 107847c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 107947c6ae99SBarry Smith #undef __FUNCT__ 108047c6ae99SBarry Smith #define __FUNCT__ "DMCompositeGetEntries" 108147c6ae99SBarry Smith /*@C 10829ae5db72SJed Brown DMCompositeGetEntries - Gets the DM for each entry in a DMComposite. 108347c6ae99SBarry Smith 108447c6ae99SBarry Smith Not Collective 108547c6ae99SBarry Smith 108647c6ae99SBarry Smith Input Parameter: 108747c6ae99SBarry Smith . dm - the packer object 108847c6ae99SBarry Smith 108947c6ae99SBarry Smith Output Parameter: 10909ae5db72SJed Brown . DM ... - the individual entries (DMs) 109147c6ae99SBarry Smith 109247c6ae99SBarry Smith Level: advanced 109347c6ae99SBarry Smith 10942fa5ba8aSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), DMCompositeGetEntriesArray() 10956eb61c8cSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 109647c6ae99SBarry Smith DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(), DMCompositeScatter(), 109747c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors() 109847c6ae99SBarry Smith 109947c6ae99SBarry Smith @*/ 11007087cfbeSBarry Smith PetscErrorCode DMCompositeGetEntries(DM dm,...) 110147c6ae99SBarry Smith { 110247c6ae99SBarry Smith va_list Argp; 110347c6ae99SBarry Smith struct DMCompositeLink *next; 110447c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 110547c6ae99SBarry Smith 110647c6ae99SBarry Smith PetscFunctionBegin; 110747c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 110847c6ae99SBarry Smith next = com->next; 110947c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 111047c6ae99SBarry Smith va_start(Argp,dm); 111147c6ae99SBarry Smith while (next) { 111247c6ae99SBarry Smith DM *dmn; 111347c6ae99SBarry Smith dmn = va_arg(Argp, DM*); 11149ae5db72SJed Brown if (dmn) *dmn = next->dm; 111547c6ae99SBarry Smith next = next->next; 111647c6ae99SBarry Smith } 111747c6ae99SBarry Smith va_end(Argp); 111847c6ae99SBarry Smith PetscFunctionReturn(0); 111947c6ae99SBarry Smith } 112047c6ae99SBarry Smith 112147c6ae99SBarry Smith #undef __FUNCT__ 11222fa5ba8aSJed Brown #define __FUNCT__ "DMCompositeGetEntriesArray" 1123dbab29e1SMark F. Adams /*@C 11242fa5ba8aSJed Brown DMCompositeGetEntriesArray - Gets the DM for each entry in a DMComposite. 11252fa5ba8aSJed Brown 11262fa5ba8aSJed Brown Not Collective 11272fa5ba8aSJed Brown 11282fa5ba8aSJed Brown Input Parameter: 11292fa5ba8aSJed Brown + dm - the packer object 11302fa5ba8aSJed Brown - dms - array of sufficient length (see DMCompositeGetNumberDM()), holds the DMs on output 11312fa5ba8aSJed Brown 11322fa5ba8aSJed Brown Level: advanced 11332fa5ba8aSJed Brown 11342fa5ba8aSJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCreateGlobalVector(), DMCompositeGetEntries() 11352fa5ba8aSJed Brown DMCompositeGather(), DMCompositeCreate(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess(), 11362fa5ba8aSJed Brown DMCompositeRestoreLocalVectors(), DMCompositeGetLocalVectors(), DMCompositeScatter(), 11372fa5ba8aSJed Brown DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors() 11382fa5ba8aSJed Brown 11392fa5ba8aSJed Brown @*/ 11402fa5ba8aSJed Brown PetscErrorCode DMCompositeGetEntriesArray(DM dm,DM dms[]) 11412fa5ba8aSJed Brown { 11422fa5ba8aSJed Brown struct DMCompositeLink *next; 11432fa5ba8aSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 11442fa5ba8aSJed Brown PetscInt i; 11452fa5ba8aSJed Brown 11462fa5ba8aSJed Brown PetscFunctionBegin; 11472fa5ba8aSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 11482fa5ba8aSJed Brown /* loop over packed objects, handling one at at time */ 11492fa5ba8aSJed Brown for (next=com->next,i=0; next; next=next->next,i++) dms[i] = next->dm; 11502fa5ba8aSJed Brown PetscFunctionReturn(0); 11512fa5ba8aSJed Brown } 11522fa5ba8aSJed Brown 11532fa5ba8aSJed Brown #undef __FUNCT__ 11540c010503SBarry Smith #define __FUNCT__ "DMRefine_Composite" 11557087cfbeSBarry Smith PetscErrorCode DMRefine_Composite(DM dmi,MPI_Comm comm,DM *fine) 115647c6ae99SBarry Smith { 115747c6ae99SBarry Smith PetscErrorCode ierr; 115847c6ae99SBarry Smith struct DMCompositeLink *next; 115947c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dmi->data; 116047c6ae99SBarry Smith DM dm; 116147c6ae99SBarry Smith 116247c6ae99SBarry Smith PetscFunctionBegin; 116347c6ae99SBarry Smith PetscValidHeaderSpecific(dmi,DM_CLASSID,1); 1164ce94432eSBarry Smith if (comm == MPI_COMM_NULL) { 1165ce94432eSBarry Smith ierr = PetscObjectGetComm((PetscObject)dmi,&comm);CHKERRQ(ierr); 1166ce94432eSBarry Smith } 11672ce3a92bSJed Brown ierr = DMSetUp(dmi);CHKERRQ(ierr); 116847c6ae99SBarry Smith next = com->next; 116947c6ae99SBarry Smith ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr); 117047c6ae99SBarry Smith 117147c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 117247c6ae99SBarry Smith while (next) { 117347c6ae99SBarry Smith ierr = DMRefine(next->dm,comm,&dm);CHKERRQ(ierr); 117447c6ae99SBarry Smith ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr); 117547c6ae99SBarry Smith ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr); 117647c6ae99SBarry Smith next = next->next; 117747c6ae99SBarry Smith } 117847c6ae99SBarry Smith PetscFunctionReturn(0); 117947c6ae99SBarry Smith } 118047c6ae99SBarry Smith 118114354c39SJed Brown #undef __FUNCT__ 118214354c39SJed Brown #define __FUNCT__ "DMCoarsen_Composite" 118314354c39SJed Brown PetscErrorCode DMCoarsen_Composite(DM dmi,MPI_Comm comm,DM *fine) 118414354c39SJed Brown { 118514354c39SJed Brown PetscErrorCode ierr; 118614354c39SJed Brown struct DMCompositeLink *next; 118714354c39SJed Brown DM_Composite *com = (DM_Composite*)dmi->data; 118814354c39SJed Brown DM dm; 118914354c39SJed Brown 119014354c39SJed Brown PetscFunctionBegin; 119114354c39SJed Brown PetscValidHeaderSpecific(dmi,DM_CLASSID,1); 11922ce3a92bSJed Brown ierr = DMSetUp(dmi);CHKERRQ(ierr); 11932ee06e3bSJed Brown if (comm == MPI_COMM_NULL) { 119425296bd5SBarry Smith ierr = PetscObjectGetComm((PetscObject)dmi,&comm);CHKERRQ(ierr); 119525296bd5SBarry Smith } 119614354c39SJed Brown next = com->next; 119714354c39SJed Brown ierr = DMCompositeCreate(comm,fine);CHKERRQ(ierr); 119814354c39SJed Brown 119914354c39SJed Brown /* loop over packed objects, handling one at at time */ 120014354c39SJed Brown while (next) { 120114354c39SJed Brown ierr = DMCoarsen(next->dm,comm,&dm);CHKERRQ(ierr); 120214354c39SJed Brown ierr = DMCompositeAddDM(*fine,dm);CHKERRQ(ierr); 120314354c39SJed Brown ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr); 120414354c39SJed Brown next = next->next; 120514354c39SJed Brown } 120614354c39SJed Brown PetscFunctionReturn(0); 120714354c39SJed Brown } 120847c6ae99SBarry Smith 120947c6ae99SBarry Smith #undef __FUNCT__ 1210e727c939SJed Brown #define __FUNCT__ "DMCreateInterpolation_Composite" 1211e727c939SJed Brown PetscErrorCode DMCreateInterpolation_Composite(DM coarse,DM fine,Mat *A,Vec *v) 121247c6ae99SBarry Smith { 121347c6ae99SBarry Smith PetscErrorCode ierr; 12149ae5db72SJed Brown PetscInt m,n,M,N,nDM,i; 121547c6ae99SBarry Smith struct DMCompositeLink *nextc; 121647c6ae99SBarry Smith struct DMCompositeLink *nextf; 121725296bd5SBarry Smith Vec gcoarse,gfine,*vecs; 121847c6ae99SBarry Smith DM_Composite *comcoarse = (DM_Composite*)coarse->data; 121947c6ae99SBarry Smith DM_Composite *comfine = (DM_Composite*)fine->data; 12209ae5db72SJed Brown Mat *mats; 122147c6ae99SBarry Smith 122247c6ae99SBarry Smith PetscFunctionBegin; 122347c6ae99SBarry Smith PetscValidHeaderSpecific(coarse,DM_CLASSID,1); 122447c6ae99SBarry Smith PetscValidHeaderSpecific(fine,DM_CLASSID,2); 1225f692024eSJed Brown ierr = DMSetUp(coarse);CHKERRQ(ierr); 1226f692024eSJed Brown ierr = DMSetUp(fine);CHKERRQ(ierr); 122747c6ae99SBarry Smith /* use global vectors only for determining matrix layout */ 12289ae5db72SJed Brown ierr = DMGetGlobalVector(coarse,&gcoarse);CHKERRQ(ierr); 12299ae5db72SJed Brown ierr = DMGetGlobalVector(fine,&gfine);CHKERRQ(ierr); 123047c6ae99SBarry Smith ierr = VecGetLocalSize(gcoarse,&n);CHKERRQ(ierr); 123147c6ae99SBarry Smith ierr = VecGetLocalSize(gfine,&m);CHKERRQ(ierr); 123247c6ae99SBarry Smith ierr = VecGetSize(gcoarse,&N);CHKERRQ(ierr); 123347c6ae99SBarry Smith ierr = VecGetSize(gfine,&M);CHKERRQ(ierr); 12349ae5db72SJed Brown ierr = DMRestoreGlobalVector(coarse,&gcoarse);CHKERRQ(ierr); 12359ae5db72SJed Brown ierr = DMRestoreGlobalVector(fine,&gfine);CHKERRQ(ierr); 123647c6ae99SBarry Smith 12379ae5db72SJed Brown nDM = comfine->nDM; 1238ce94432eSBarry Smith if (nDM != comcoarse->nDM) SETERRQ2(PetscObjectComm((PetscObject)fine),PETSC_ERR_ARG_INCOMP,"Fine DMComposite has %D entries, but coarse has %D",nDM,comcoarse->nDM); 12391795a4d1SJed Brown ierr = PetscCalloc1(nDM*nDM,&mats);CHKERRQ(ierr); 124025296bd5SBarry Smith if (v) { 12411795a4d1SJed Brown ierr = PetscCalloc1(nDM,&vecs);CHKERRQ(ierr); 124225296bd5SBarry Smith } 124347c6ae99SBarry Smith 124447c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 12459ae5db72SJed Brown for (nextc=comcoarse->next,nextf=comfine->next,i=0; nextc; nextc=nextc->next,nextf=nextf->next,i++) { 124625296bd5SBarry Smith if (!v) { 12470298fd71SBarry Smith ierr = DMCreateInterpolation(nextc->dm,nextf->dm,&mats[i*nDM+i],NULL);CHKERRQ(ierr); 124825296bd5SBarry Smith } else { 124925296bd5SBarry Smith ierr = DMCreateInterpolation(nextc->dm,nextf->dm,&mats[i*nDM+i],&vecs[i]);CHKERRQ(ierr); 125025296bd5SBarry Smith } 125147c6ae99SBarry Smith } 1252ce94432eSBarry Smith ierr = MatCreateNest(PetscObjectComm((PetscObject)fine),nDM,NULL,nDM,NULL,mats,A);CHKERRQ(ierr); 125325296bd5SBarry Smith if (v) { 1254ce94432eSBarry Smith ierr = VecCreateNest(PetscObjectComm((PetscObject)fine),nDM,NULL,vecs,v);CHKERRQ(ierr); 125525296bd5SBarry Smith } 12569ae5db72SJed Brown for (i=0; i<nDM*nDM; i++) {ierr = MatDestroy(&mats[i]);CHKERRQ(ierr);} 12579ae5db72SJed Brown ierr = PetscFree(mats);CHKERRQ(ierr); 125825296bd5SBarry Smith if (v) { 125925296bd5SBarry Smith for (i=0; i<nDM; i++) {ierr = VecDestroy(&vecs[i]);CHKERRQ(ierr);} 126025296bd5SBarry Smith ierr = PetscFree(vecs);CHKERRQ(ierr); 126125296bd5SBarry Smith } 126247c6ae99SBarry Smith PetscFunctionReturn(0); 126347c6ae99SBarry Smith } 126447c6ae99SBarry Smith 126547c6ae99SBarry Smith #undef __FUNCT__ 1266184d77edSJed Brown #define __FUNCT__ "DMGetLocalToGlobalMapping_Composite" 1267184d77edSJed Brown static PetscErrorCode DMGetLocalToGlobalMapping_Composite(DM dm) 12681411c6eeSJed Brown { 12691411c6eeSJed Brown DM_Composite *com = (DM_Composite*)dm->data; 12701411c6eeSJed Brown ISLocalToGlobalMapping *ltogs; 1271f7efa3c7SJed Brown PetscInt i; 12721411c6eeSJed Brown PetscErrorCode ierr; 12731411c6eeSJed Brown 12741411c6eeSJed Brown PetscFunctionBegin; 12751411c6eeSJed Brown /* Set the ISLocalToGlobalMapping on the new matrix */ 12761411c6eeSJed Brown ierr = DMCompositeGetISLocalToGlobalMappings(dm,<ogs);CHKERRQ(ierr); 1277ce94432eSBarry Smith ierr = ISLocalToGlobalMappingConcatenate(PetscObjectComm((PetscObject)dm),com->nDM,ltogs,&dm->ltogmap);CHKERRQ(ierr); 12789ae5db72SJed Brown for (i=0; i<com->nDM; i++) {ierr = ISLocalToGlobalMappingDestroy(<ogs[i]);CHKERRQ(ierr);} 12791411c6eeSJed Brown ierr = PetscFree(ltogs);CHKERRQ(ierr); 12801411c6eeSJed Brown PetscFunctionReturn(0); 12811411c6eeSJed Brown } 12821411c6eeSJed Brown 12831411c6eeSJed Brown 12841411c6eeSJed Brown #undef __FUNCT__ 1285e727c939SJed Brown #define __FUNCT__ "DMCreateColoring_Composite" 1286b412c318SBarry Smith PetscErrorCode DMCreateColoring_Composite(DM dm,ISColoringType ctype,ISColoring *coloring) 128747c6ae99SBarry Smith { 128847c6ae99SBarry Smith PetscErrorCode ierr; 128947c6ae99SBarry Smith PetscInt n,i,cnt; 129047c6ae99SBarry Smith ISColoringValue *colors; 129147c6ae99SBarry Smith PetscBool dense = PETSC_FALSE; 129247c6ae99SBarry Smith ISColoringValue maxcol = 0; 129347c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 129447c6ae99SBarry Smith 129547c6ae99SBarry Smith PetscFunctionBegin; 129647c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 1297ce94432eSBarry Smith if (ctype == IS_COLORING_GHOSTED) SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_SUP,"Only global coloring supported"); 1298e3247f34SBarry Smith else if (ctype == IS_COLORING_GLOBAL) { 129947c6ae99SBarry Smith n = com->n; 1300ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)dm),PETSC_ERR_ARG_OUTOFRANGE,"Unknown ISColoringType"); 1301785e854fSJed Brown ierr = PetscMalloc1(n,&colors);CHKERRQ(ierr); /* freed in ISColoringDestroy() */ 130247c6ae99SBarry Smith 13030298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-dmcomposite_dense_jacobian",&dense,NULL);CHKERRQ(ierr); 130447c6ae99SBarry Smith if (dense) { 130547c6ae99SBarry Smith for (i=0; i<n; i++) { 130647c6ae99SBarry Smith colors[i] = (ISColoringValue)(com->rstart + i); 130747c6ae99SBarry Smith } 130847c6ae99SBarry Smith maxcol = com->N; 130947c6ae99SBarry Smith } else { 131047c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 131147c6ae99SBarry Smith PetscMPIInt rank; 131247c6ae99SBarry Smith 1313ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 131447c6ae99SBarry Smith cnt = 0; 131547c6ae99SBarry Smith while (next) { 131647c6ae99SBarry Smith ISColoring lcoloring; 131747c6ae99SBarry Smith 1318b412c318SBarry Smith ierr = DMCreateColoring(next->dm,IS_COLORING_GLOBAL,&lcoloring);CHKERRQ(ierr); 131947c6ae99SBarry Smith for (i=0; i<lcoloring->N; i++) { 132047c6ae99SBarry Smith colors[cnt++] = maxcol + lcoloring->colors[i]; 132147c6ae99SBarry Smith } 132247c6ae99SBarry Smith maxcol += lcoloring->n; 1323fcfd50ebSBarry Smith ierr = ISColoringDestroy(&lcoloring);CHKERRQ(ierr); 132447c6ae99SBarry Smith next = next->next; 132547c6ae99SBarry Smith } 132647c6ae99SBarry Smith } 1327*aaf3ff59SMatthew G. Knepley ierr = ISColoringCreate(PetscObjectComm((PetscObject)dm),maxcol,n,colors,PETSC_OWN_POINTER,coloring);CHKERRQ(ierr); 132847c6ae99SBarry Smith PetscFunctionReturn(0); 132947c6ae99SBarry Smith } 133047c6ae99SBarry Smith 133147c6ae99SBarry Smith #undef __FUNCT__ 13320c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalBegin_Composite" 13337087cfbeSBarry Smith PetscErrorCode DMGlobalToLocalBegin_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec) 133447c6ae99SBarry Smith { 133547c6ae99SBarry Smith PetscErrorCode ierr; 133647c6ae99SBarry Smith struct DMCompositeLink *next; 133747c6ae99SBarry Smith PetscInt cnt = 3; 133847c6ae99SBarry Smith PetscMPIInt rank; 133947c6ae99SBarry Smith PetscScalar *garray,*larray; 134047c6ae99SBarry Smith DM_Composite *com = (DM_Composite*)dm->data; 134147c6ae99SBarry Smith 134247c6ae99SBarry Smith PetscFunctionBegin; 134347c6ae99SBarry Smith PetscValidHeaderSpecific(dm,DM_CLASSID,1); 134447c6ae99SBarry Smith PetscValidHeaderSpecific(gvec,VEC_CLASSID,2); 134547c6ae99SBarry Smith next = com->next; 134647c6ae99SBarry Smith if (!com->setup) { 1347d7bf68aeSBarry Smith ierr = DMSetUp(dm);CHKERRQ(ierr); 134847c6ae99SBarry Smith } 1349ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm),&rank);CHKERRQ(ierr); 135047c6ae99SBarry Smith ierr = VecGetArray(gvec,&garray);CHKERRQ(ierr); 135147c6ae99SBarry Smith ierr = VecGetArray(lvec,&larray);CHKERRQ(ierr); 135247c6ae99SBarry Smith 135347c6ae99SBarry Smith /* loop over packed objects, handling one at at time */ 135447c6ae99SBarry Smith while (next) { 135547c6ae99SBarry Smith Vec local,global; 135647c6ae99SBarry Smith PetscInt N; 135747c6ae99SBarry Smith 135847c6ae99SBarry Smith ierr = DMGetGlobalVector(next->dm,&global);CHKERRQ(ierr); 135947c6ae99SBarry Smith ierr = VecGetLocalSize(global,&N);CHKERRQ(ierr); 136047c6ae99SBarry Smith ierr = VecPlaceArray(global,garray);CHKERRQ(ierr); 136147c6ae99SBarry Smith ierr = DMGetLocalVector(next->dm,&local);CHKERRQ(ierr); 136247c6ae99SBarry Smith ierr = VecPlaceArray(local,larray);CHKERRQ(ierr); 136347c6ae99SBarry Smith ierr = DMGlobalToLocalBegin(next->dm,global,mode,local);CHKERRQ(ierr); 136447c6ae99SBarry Smith ierr = DMGlobalToLocalEnd(next->dm,global,mode,local);CHKERRQ(ierr); 136547c6ae99SBarry Smith ierr = VecResetArray(global);CHKERRQ(ierr); 136647c6ae99SBarry Smith ierr = VecResetArray(local);CHKERRQ(ierr); 136747c6ae99SBarry Smith ierr = DMRestoreGlobalVector(next->dm,&global);CHKERRQ(ierr); 136847c6ae99SBarry Smith ierr = DMRestoreGlobalVector(next->dm,&local);CHKERRQ(ierr); 136947c6ae99SBarry Smith cnt++; 137006ebdd98SJed Brown larray += next->nlocal; 137147c6ae99SBarry Smith next = next->next; 137247c6ae99SBarry Smith } 137347c6ae99SBarry Smith 13740298fd71SBarry Smith ierr = VecRestoreArray(gvec,NULL);CHKERRQ(ierr); 13750298fd71SBarry Smith ierr = VecRestoreArray(lvec,NULL);CHKERRQ(ierr); 137647c6ae99SBarry Smith PetscFunctionReturn(0); 137747c6ae99SBarry Smith } 137847c6ae99SBarry Smith 137947c6ae99SBarry Smith #undef __FUNCT__ 13800c010503SBarry Smith #define __FUNCT__ "DMGlobalToLocalEnd_Composite" 13817087cfbeSBarry Smith PetscErrorCode DMGlobalToLocalEnd_Composite(DM dm,Vec gvec,InsertMode mode,Vec lvec) 13820c010503SBarry Smith { 13830c010503SBarry Smith PetscFunctionBegin; 13840c010503SBarry Smith PetscFunctionReturn(0); 13850c010503SBarry Smith } 138647c6ae99SBarry Smith 13876ae3a549SBarry Smith /*MC 13886ae3a549SBarry Smith DMCOMPOSITE = "composite" - A DM object that is used to manage data for a collection of DMs 13896ae3a549SBarry Smith 13906ae3a549SBarry Smith Level: intermediate 13916ae3a549SBarry Smith 13926ae3a549SBarry Smith .seealso: DMType, DMCOMPOSITE, DMDACreate(), DMCreate(), DMSetType(), DMCompositeCreate() 13936ae3a549SBarry Smith M*/ 13946ae3a549SBarry Smith 13956ae3a549SBarry Smith 1396a4121054SBarry Smith #undef __FUNCT__ 1397a4121054SBarry Smith #define __FUNCT__ "DMCreate_Composite" 13988cc058d9SJed Brown PETSC_EXTERN PetscErrorCode DMCreate_Composite(DM p) 1399a4121054SBarry Smith { 1400a4121054SBarry Smith PetscErrorCode ierr; 1401a4121054SBarry Smith DM_Composite *com; 1402a4121054SBarry Smith 1403a4121054SBarry Smith PetscFunctionBegin; 1404b00a9115SJed Brown ierr = PetscNewLog(p,&com);CHKERRQ(ierr); 1405a4121054SBarry Smith p->data = com; 1406a4121054SBarry Smith ierr = PetscObjectChangeTypeName((PetscObject)p,"DMComposite");CHKERRQ(ierr); 1407a4121054SBarry Smith com->n = 0; 14080298fd71SBarry Smith com->next = NULL; 1409a4121054SBarry Smith com->nDM = 0; 1410a4121054SBarry Smith 1411a4121054SBarry Smith p->ops->createglobalvector = DMCreateGlobalVector_Composite; 1412a4121054SBarry Smith p->ops->createlocalvector = DMCreateLocalVector_Composite; 1413184d77edSJed Brown p->ops->getlocaltoglobalmapping = DMGetLocalToGlobalMapping_Composite; 14144d343eeaSMatthew G Knepley p->ops->createfieldis = DMCreateFieldIS_Composite; 141516621825SDmitry Karpeev p->ops->createfielddecomposition = DMCreateFieldDecomposition_Composite; 1416a4121054SBarry Smith p->ops->refine = DMRefine_Composite; 141714354c39SJed Brown p->ops->coarsen = DMCoarsen_Composite; 141825296bd5SBarry Smith p->ops->createinterpolation = DMCreateInterpolation_Composite; 141925296bd5SBarry Smith p->ops->creatematrix = DMCreateMatrix_Composite; 1420e727c939SJed Brown p->ops->getcoloring = DMCreateColoring_Composite; 1421a4121054SBarry Smith p->ops->globaltolocalbegin = DMGlobalToLocalBegin_Composite; 1422a4121054SBarry Smith p->ops->globaltolocalend = DMGlobalToLocalEnd_Composite; 1423a4121054SBarry Smith p->ops->destroy = DMDestroy_Composite; 1424a4121054SBarry Smith p->ops->view = DMView_Composite; 1425a4121054SBarry Smith p->ops->setup = DMSetUp_Composite; 1426a4121054SBarry Smith PetscFunctionReturn(0); 1427a4121054SBarry Smith } 1428a4121054SBarry Smith 14290c010503SBarry Smith #undef __FUNCT__ 14300c010503SBarry Smith #define __FUNCT__ "DMCompositeCreate" 14310c010503SBarry Smith /*@C 14320c010503SBarry Smith DMCompositeCreate - Creates a vector packer, used to generate "composite" 14330c010503SBarry Smith vectors made up of several subvectors. 14340c010503SBarry Smith 14350c010503SBarry Smith Collective on MPI_Comm 143647c6ae99SBarry Smith 143747c6ae99SBarry Smith Input Parameter: 14380c010503SBarry Smith . comm - the processors that will share the global vector 14390c010503SBarry Smith 14400c010503SBarry Smith Output Parameters: 14410c010503SBarry Smith . packer - the packer object 144247c6ae99SBarry Smith 144347c6ae99SBarry Smith Level: advanced 144447c6ae99SBarry Smith 14459ae5db72SJed Brown .seealso DMDestroy(), DMCompositeAddDM(), DMCompositeScatter(), 14466eb61c8cSJed Brown DMCompositeGather(), DMCreateGlobalVector(), DMCompositeGetISLocalToGlobalMappings(), DMCompositeGetAccess() 144747c6ae99SBarry Smith DMCompositeGetLocalVectors(), DMCompositeRestoreLocalVectors(), DMCompositeGetEntries() 144847c6ae99SBarry Smith 144947c6ae99SBarry Smith @*/ 14507087cfbeSBarry Smith PetscErrorCode DMCompositeCreate(MPI_Comm comm,DM *packer) 145147c6ae99SBarry Smith { 14520c010503SBarry Smith PetscErrorCode ierr; 14530c010503SBarry Smith 145447c6ae99SBarry Smith PetscFunctionBegin; 14550c010503SBarry Smith PetscValidPointer(packer,2); 1456a4121054SBarry Smith ierr = DMCreate(comm,packer);CHKERRQ(ierr); 1457a4121054SBarry Smith ierr = DMSetType(*packer,DMCOMPOSITE);CHKERRQ(ierr); 145847c6ae99SBarry Smith PetscFunctionReturn(0); 145947c6ae99SBarry Smith } 1460