1ccd284c7SBarry Smith #include <../src/dm/impls/composite/packimpl.h> /*I "petscdmcomposite.h" I*/ 2af0996ceSBarry Smith #include <petsc/private/isimpl.h> 3e10fd815SStefano Zampini #include <petsc/private/glvisviewerimpl.h> 42764a2aaSMatthew G. Knepley #include <petscds.h> 547c6ae99SBarry Smith 647c6ae99SBarry Smith /*@C 747c6ae99SBarry Smith DMCompositeSetCoupling - Sets user provided routines that compute the coupling between the 8dce8aebaSBarry Smith separate components `DM` in a `DMCOMPOSITE` to build the correct matrix nonzero structure. 947c6ae99SBarry Smith 1020f4b53cSBarry Smith Logically Collective; No Fortran Support 1147c6ae99SBarry Smith 12d8d19677SJose E. Roman Input Parameters: 1347c6ae99SBarry Smith + dm - the composite object 1460225df5SJacob Faibussowitsch - FormCoupleLocations - routine to set the nonzero locations in the matrix 1547c6ae99SBarry Smith 1647c6ae99SBarry Smith Level: advanced 1747c6ae99SBarry Smith 18dce8aebaSBarry Smith Note: 19dce8aebaSBarry Smith See `DMSetApplicationContext()` and `DMGetApplicationContext()` for how to get user information into 2047c6ae99SBarry Smith this routine 2147c6ae99SBarry Smith 22dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM` 2347c6ae99SBarry Smith @*/ 24d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeSetCoupling(DM dm, PetscErrorCode (*FormCoupleLocations)(DM, Mat, PetscInt *, PetscInt *, PetscInt, PetscInt, PetscInt, PetscInt)) 25d71ae5a4SJacob Faibussowitsch { 2647c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 2771b14b3eSStefano Zampini PetscBool flg; 2847c6ae99SBarry Smith 2947c6ae99SBarry Smith PetscFunctionBegin; 309566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 317a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 3247c6ae99SBarry Smith com->FormCoupleLocations = FormCoupleLocations; 333ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3447c6ae99SBarry Smith } 3547c6ae99SBarry Smith 3666976f2fSJacob Faibussowitsch static PetscErrorCode DMDestroy_Composite(DM dm) 37d71ae5a4SJacob Faibussowitsch { 3847c6ae99SBarry Smith struct DMCompositeLink *next, *prev; 3947c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 4047c6ae99SBarry Smith 4147c6ae99SBarry Smith PetscFunctionBegin; 4247c6ae99SBarry Smith next = com->next; 4347c6ae99SBarry Smith while (next) { 4447c6ae99SBarry Smith prev = next; 4547c6ae99SBarry Smith next = next->next; 469566063dSJacob Faibussowitsch PetscCall(DMDestroy(&prev->dm)); 479566063dSJacob Faibussowitsch PetscCall(PetscFree(prev->grstarts)); 489566063dSJacob Faibussowitsch PetscCall(PetscFree(prev)); 4947c6ae99SBarry Smith } 509566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)dm, "DMSetUpGLVisViewer_C", NULL)); 51435a35e8SMatthew G Knepley /* This was originally freed in DMDestroy(), but that prevents reference counting of backend objects */ 529566063dSJacob Faibussowitsch PetscCall(PetscFree(com)); 533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5447c6ae99SBarry Smith } 5547c6ae99SBarry Smith 5666976f2fSJacob Faibussowitsch static PetscErrorCode DMView_Composite(DM dm, PetscViewer v) 57d71ae5a4SJacob Faibussowitsch { 5847c6ae99SBarry Smith PetscBool iascii; 5947c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 6047c6ae99SBarry Smith 6147c6ae99SBarry Smith PetscFunctionBegin; 629566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)v, PETSCVIEWERASCII, &iascii)); 6347c6ae99SBarry Smith if (iascii) { 6447c6ae99SBarry Smith struct DMCompositeLink *lnk = com->next; 6547c6ae99SBarry Smith PetscInt i; 6647c6ae99SBarry Smith 679566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(v, "DM (%s)\n", ((PetscObject)dm)->prefix ? ((PetscObject)dm)->prefix : "no prefix")); 6863a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(v, " contains %" PetscInt_FMT " DMs\n", com->nDM)); 699566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(v)); 7047c6ae99SBarry Smith for (i = 0; lnk; lnk = lnk->next, i++) { 7163a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(v, "Link %" PetscInt_FMT ": DM of type %s\n", i, ((PetscObject)lnk->dm)->type_name)); 729566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushTab(v)); 739566063dSJacob Faibussowitsch PetscCall(DMView(lnk->dm, v)); 749566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(v)); 7547c6ae99SBarry Smith } 769566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopTab(v)); 7747c6ae99SBarry Smith } 783ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7947c6ae99SBarry Smith } 8047c6ae99SBarry Smith 8147c6ae99SBarry Smith /* --------------------------------------------------------------------------------------*/ 8266976f2fSJacob Faibussowitsch static PetscErrorCode DMSetUp_Composite(DM dm) 83d71ae5a4SJacob Faibussowitsch { 8447c6ae99SBarry Smith PetscInt nprev = 0; 8547c6ae99SBarry Smith PetscMPIInt rank, size; 8647c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 8747c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 8847c6ae99SBarry Smith PetscLayout map; 8947c6ae99SBarry Smith 9047c6ae99SBarry Smith PetscFunctionBegin; 9128b400f6SJacob Faibussowitsch PetscCheck(!com->setup, PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONGSTATE, "Packer has already been setup"); 929566063dSJacob Faibussowitsch PetscCall(PetscLayoutCreate(PetscObjectComm((PetscObject)dm), &map)); 939566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetLocalSize(map, com->n)); 949566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(map, PETSC_DETERMINE)); 959566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetBlockSize(map, 1)); 969566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(map)); 979566063dSJacob Faibussowitsch PetscCall(PetscLayoutGetSize(map, &com->N)); 989566063dSJacob Faibussowitsch PetscCall(PetscLayoutGetRange(map, &com->rstart, NULL)); 999566063dSJacob Faibussowitsch PetscCall(PetscLayoutDestroy(&map)); 10047c6ae99SBarry Smith 1019ae5db72SJed Brown /* now set the rstart for each linked vector */ 1029566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)dm), &rank)); 1039566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)dm), &size)); 10447c6ae99SBarry Smith while (next) { 10547c6ae99SBarry Smith next->rstart = nprev; 10606ebdd98SJed Brown nprev += next->n; 10747c6ae99SBarry Smith next->grstart = com->rstart + next->rstart; 1089566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(size, &next->grstarts)); 1099566063dSJacob Faibussowitsch PetscCallMPI(MPI_Allgather(&next->grstart, 1, MPIU_INT, next->grstarts, 1, MPIU_INT, PetscObjectComm((PetscObject)dm))); 11047c6ae99SBarry Smith next = next->next; 11147c6ae99SBarry Smith } 11247c6ae99SBarry Smith com->setup = PETSC_TRUE; 1133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 11447c6ae99SBarry Smith } 11547c6ae99SBarry Smith 11647c6ae99SBarry Smith /* ----------------------------------------------------------------------------------*/ 11747c6ae99SBarry Smith 11873e31fe2SJed Brown /*@ 119aaa8cc7dSPierre Jolivet DMCompositeGetNumberDM - Gets the number of `DM` objects in the `DMCOMPOSITE` 12047c6ae99SBarry Smith representation. 12147c6ae99SBarry Smith 12247c6ae99SBarry Smith Not Collective 12347c6ae99SBarry Smith 12447c6ae99SBarry Smith Input Parameter: 125dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 12647c6ae99SBarry Smith 12747c6ae99SBarry Smith Output Parameter: 128dce8aebaSBarry Smith . nDM - the number of `DM` 12947c6ae99SBarry Smith 13047c6ae99SBarry Smith Level: beginner 13147c6ae99SBarry Smith 132dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM` 13347c6ae99SBarry Smith @*/ 134d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetNumberDM(DM dm, PetscInt *nDM) 135d71ae5a4SJacob Faibussowitsch { 13647c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 13771b14b3eSStefano Zampini PetscBool flg; 1385fd66863SKarl Rupp 13947c6ae99SBarry Smith PetscFunctionBegin; 14047c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 1419566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 1427a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 14347c6ae99SBarry Smith *nDM = com->nDM; 1443ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14547c6ae99SBarry Smith } 14647c6ae99SBarry Smith 14747c6ae99SBarry Smith /*@C 14847c6ae99SBarry Smith DMCompositeGetAccess - Allows one to access the individual packed vectors in their global 14947c6ae99SBarry Smith representation. 15047c6ae99SBarry Smith 15120f4b53cSBarry Smith Collective 15247c6ae99SBarry Smith 1539ae5db72SJed Brown Input Parameters: 154dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 1559ae5db72SJed Brown - gvec - the global vector 1569ae5db72SJed Brown 1572fe279fdSBarry Smith Output Parameter: 158a4e35b19SJacob Faibussowitsch . ... - the packed parallel vectors, `NULL` for those that are not needed 15947c6ae99SBarry Smith 16047c6ae99SBarry Smith Level: advanced 16147c6ae99SBarry Smith 162dce8aebaSBarry Smith Note: 163dce8aebaSBarry Smith Use `DMCompositeRestoreAccess()` to return the vectors when you no longer need them 164dce8aebaSBarry Smith 16560225df5SJacob Faibussowitsch Fortran Notes: 166dce8aebaSBarry Smith Fortran callers must use numbered versions of this routine, e.g., DMCompositeGetAccess4(dm,gvec,vec1,vec2,vec3,vec4) 167dce8aebaSBarry Smith or use the alternative interface `DMCompositeGetAccessArray()`. 168dce8aebaSBarry Smith 169dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeGetEntries()`, `DMCompositeScatter()` 17047c6ae99SBarry Smith @*/ 171d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetAccess(DM dm, Vec gvec, ...) 172d71ae5a4SJacob Faibussowitsch { 17347c6ae99SBarry Smith va_list Argp; 17447c6ae99SBarry Smith struct DMCompositeLink *next; 17547c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 1765edff71fSBarry Smith PetscInt readonly; 17771b14b3eSStefano Zampini PetscBool flg; 17847c6ae99SBarry Smith 17947c6ae99SBarry Smith PetscFunctionBegin; 18047c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 18147c6ae99SBarry Smith PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 1829566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 1837a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 18447c6ae99SBarry Smith next = com->next; 18548a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 18647c6ae99SBarry Smith 1879566063dSJacob Faibussowitsch PetscCall(VecLockGet(gvec, &readonly)); 18815229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 18947c6ae99SBarry Smith va_start(Argp, gvec); 19047c6ae99SBarry Smith while (next) { 19147c6ae99SBarry Smith Vec *vec; 19247c6ae99SBarry Smith vec = va_arg(Argp, Vec *); 1939ae5db72SJed Brown if (vec) { 1949566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, vec)); 1955edff71fSBarry Smith if (readonly) { 1965edff71fSBarry Smith const PetscScalar *array; 1979566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(gvec, &array)); 1989566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(*vec, array + next->rstart)); 1999566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(*vec)); 2009566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(gvec, &array)); 2015edff71fSBarry Smith } else { 2025edff71fSBarry Smith PetscScalar *array; 2039566063dSJacob Faibussowitsch PetscCall(VecGetArray(gvec, &array)); 2049566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(*vec, array + next->rstart)); 2059566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(gvec, &array)); 20647c6ae99SBarry Smith } 2075edff71fSBarry Smith } 20847c6ae99SBarry Smith next = next->next; 20947c6ae99SBarry Smith } 21047c6ae99SBarry Smith va_end(Argp); 2113ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 21247c6ae99SBarry Smith } 21347c6ae99SBarry Smith 214f73e5cebSJed Brown /*@C 215f73e5cebSJed Brown DMCompositeGetAccessArray - Allows one to access the individual packed vectors in their global 216f73e5cebSJed Brown representation. 217f73e5cebSJed Brown 21820f4b53cSBarry Smith Collective 219f73e5cebSJed Brown 220f73e5cebSJed Brown Input Parameters: 221dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` 222f73e5cebSJed Brown . pvec - packed vector 223f73e5cebSJed Brown . nwanted - number of vectors wanted 224*f13dfd9eSBarry Smith - wanted - sorted array of vectors wanted, or `NULL` to get all vectors, length `nwanted` 225f73e5cebSJed Brown 2262fe279fdSBarry Smith Output Parameter: 227*f13dfd9eSBarry Smith . vecs - array of requested global vectors (must be previously allocated and of length `nwanted`) 228f73e5cebSJed Brown 229f73e5cebSJed Brown Level: advanced 230f73e5cebSJed Brown 231dce8aebaSBarry Smith Note: 232dce8aebaSBarry Smith Use `DMCompositeRestoreAccessArray()` to return the vectors when you no longer need them 233dce8aebaSBarry Smith 234dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeGetAccess()`, `DMCompositeGetEntries()`, `DMCompositeScatter()`, `DMCompositeGather()` 235f73e5cebSJed Brown @*/ 236d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetAccessArray(DM dm, Vec pvec, PetscInt nwanted, const PetscInt *wanted, Vec *vecs) 237d71ae5a4SJacob Faibussowitsch { 238f73e5cebSJed Brown struct DMCompositeLink *link; 239f73e5cebSJed Brown PetscInt i, wnum; 240f73e5cebSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 241bee642f7SBarry Smith PetscInt readonly; 24271b14b3eSStefano Zampini PetscBool flg; 243f73e5cebSJed Brown 244f73e5cebSJed Brown PetscFunctionBegin; 245f73e5cebSJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 246f73e5cebSJed Brown PetscValidHeaderSpecific(pvec, VEC_CLASSID, 2); 2479566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 2487a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 24948a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 250f73e5cebSJed Brown 2519566063dSJacob Faibussowitsch PetscCall(VecLockGet(pvec, &readonly)); 252f73e5cebSJed Brown for (i = 0, wnum = 0, link = com->next; link && wnum < nwanted; i++, link = link->next) { 253f73e5cebSJed Brown if (!wanted || i == wanted[wnum]) { 254f73e5cebSJed Brown Vec v; 2559566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(link->dm, &v)); 256bee642f7SBarry Smith if (readonly) { 257bee642f7SBarry Smith const PetscScalar *array; 2589566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(pvec, &array)); 2599566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(v, array + link->rstart)); 2609566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(v)); 2619566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(pvec, &array)); 262bee642f7SBarry Smith } else { 263bee642f7SBarry Smith PetscScalar *array; 2649566063dSJacob Faibussowitsch PetscCall(VecGetArray(pvec, &array)); 2659566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(v, array + link->rstart)); 2669566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(pvec, &array)); 267bee642f7SBarry Smith } 268f73e5cebSJed Brown vecs[wnum++] = v; 269f73e5cebSJed Brown } 270f73e5cebSJed Brown } 2713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 272f73e5cebSJed Brown } 273f73e5cebSJed Brown 2747ac2b803SAlex Fikl /*@C 2757ac2b803SAlex Fikl DMCompositeGetLocalAccessArray - Allows one to access the individual 2767ac2b803SAlex Fikl packed vectors in their local representation. 2777ac2b803SAlex Fikl 27820f4b53cSBarry Smith Collective 2797ac2b803SAlex Fikl 2807ac2b803SAlex Fikl Input Parameters: 281dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` 2827ac2b803SAlex Fikl . pvec - packed vector 2837ac2b803SAlex Fikl . nwanted - number of vectors wanted 284*f13dfd9eSBarry Smith - wanted - sorted array of vectors wanted, or `NULL` to get all vectors, length `nwanted` 2857ac2b803SAlex Fikl 2862fe279fdSBarry Smith Output Parameter: 287*f13dfd9eSBarry Smith . vecs - array of requested local vectors (must be allocated and of length `nwanted`) 2887ac2b803SAlex Fikl 2897ac2b803SAlex Fikl Level: advanced 2907ac2b803SAlex Fikl 291dce8aebaSBarry Smith Note: 292dce8aebaSBarry Smith Use `DMCompositeRestoreLocalAccessArray()` to return the vectors 293dce8aebaSBarry Smith when you no longer need them. 294dce8aebaSBarry Smith 295dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeRestoreLocalAccessArray()`, `DMCompositeGetAccess()`, 296db781477SPatrick Sanan `DMCompositeGetEntries()`, `DMCompositeScatter()`, `DMCompositeGather()` 2977ac2b803SAlex Fikl @*/ 298d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetLocalAccessArray(DM dm, Vec pvec, PetscInt nwanted, const PetscInt *wanted, Vec *vecs) 299d71ae5a4SJacob Faibussowitsch { 3007ac2b803SAlex Fikl struct DMCompositeLink *link; 3017ac2b803SAlex Fikl PetscInt i, wnum; 3027ac2b803SAlex Fikl DM_Composite *com = (DM_Composite *)dm->data; 3037ac2b803SAlex Fikl PetscInt readonly; 3047ac2b803SAlex Fikl PetscInt nlocal = 0; 30571b14b3eSStefano Zampini PetscBool flg; 3067ac2b803SAlex Fikl 3077ac2b803SAlex Fikl PetscFunctionBegin; 3087ac2b803SAlex Fikl PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 3097ac2b803SAlex Fikl PetscValidHeaderSpecific(pvec, VEC_CLASSID, 2); 3109566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 3117a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 31248a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 3137ac2b803SAlex Fikl 3149566063dSJacob Faibussowitsch PetscCall(VecLockGet(pvec, &readonly)); 3157ac2b803SAlex Fikl for (i = 0, wnum = 0, link = com->next; link && wnum < nwanted; i++, link = link->next) { 3167ac2b803SAlex Fikl if (!wanted || i == wanted[wnum]) { 3177ac2b803SAlex Fikl Vec v; 3189566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(link->dm, &v)); 3197ac2b803SAlex Fikl if (readonly) { 3207ac2b803SAlex Fikl const PetscScalar *array; 3219566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(pvec, &array)); 3229566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(v, array + nlocal)); 323b1c3483dSMark Adams // this method does not make sense. The local vectors are not updated with a global-to-local and the user can not do it because it is locked 3249566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(v)); 3259566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(pvec, &array)); 3267ac2b803SAlex Fikl } else { 3277ac2b803SAlex Fikl PetscScalar *array; 3289566063dSJacob Faibussowitsch PetscCall(VecGetArray(pvec, &array)); 3299566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(v, array + nlocal)); 3309566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(pvec, &array)); 3317ac2b803SAlex Fikl } 3327ac2b803SAlex Fikl vecs[wnum++] = v; 3337ac2b803SAlex Fikl } 3347ac2b803SAlex Fikl 3357ac2b803SAlex Fikl nlocal += link->nlocal; 3367ac2b803SAlex Fikl } 3373ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3387ac2b803SAlex Fikl } 3397ac2b803SAlex Fikl 34047c6ae99SBarry Smith /*@C 341dce8aebaSBarry Smith DMCompositeRestoreAccess - Returns the vectors obtained with `DMCompositeGetAccess()` 34247c6ae99SBarry Smith representation. 34347c6ae99SBarry Smith 34420f4b53cSBarry Smith Collective 34547c6ae99SBarry Smith 3469ae5db72SJed Brown Input Parameters: 347dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 34847c6ae99SBarry Smith . gvec - the global vector 349a4e35b19SJacob Faibussowitsch - ... - the individual parallel vectors, `NULL` for those that are not needed 35047c6ae99SBarry Smith 35147c6ae99SBarry Smith Level: advanced 35247c6ae99SBarry Smith 353dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 354db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeScatter()`, 35542747ad1SJacob Faibussowitsch `DMCompositeGetAccess()` 35647c6ae99SBarry Smith @*/ 357d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeRestoreAccess(DM dm, Vec gvec, ...) 358d71ae5a4SJacob Faibussowitsch { 35947c6ae99SBarry Smith va_list Argp; 36047c6ae99SBarry Smith struct DMCompositeLink *next; 36147c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 3625edff71fSBarry Smith PetscInt readonly; 36371b14b3eSStefano Zampini PetscBool flg; 36447c6ae99SBarry Smith 36547c6ae99SBarry Smith PetscFunctionBegin; 36647c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 36747c6ae99SBarry Smith PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 3689566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 3697a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 37047c6ae99SBarry Smith next = com->next; 37148a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 37247c6ae99SBarry Smith 3739566063dSJacob Faibussowitsch PetscCall(VecLockGet(gvec, &readonly)); 37415229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 37547c6ae99SBarry Smith va_start(Argp, gvec); 37647c6ae99SBarry Smith while (next) { 37747c6ae99SBarry Smith Vec *vec; 37847c6ae99SBarry Smith vec = va_arg(Argp, Vec *); 3799ae5db72SJed Brown if (vec) { 3809566063dSJacob Faibussowitsch PetscCall(VecResetArray(*vec)); 3811baa6e33SBarry Smith if (readonly) PetscCall(VecLockReadPop(*vec)); 3829566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, vec)); 38347c6ae99SBarry Smith } 38447c6ae99SBarry Smith next = next->next; 38547c6ae99SBarry Smith } 38647c6ae99SBarry Smith va_end(Argp); 3873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 38847c6ae99SBarry Smith } 38947c6ae99SBarry Smith 390f73e5cebSJed Brown /*@C 391dce8aebaSBarry Smith DMCompositeRestoreAccessArray - Returns the vectors obtained with `DMCompositeGetAccessArray()` 392f73e5cebSJed Brown 39320f4b53cSBarry Smith Collective 394f73e5cebSJed Brown 395f73e5cebSJed Brown Input Parameters: 396dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 397f73e5cebSJed Brown . pvec - packed vector 398f73e5cebSJed Brown . nwanted - number of vectors wanted 399*f13dfd9eSBarry Smith . wanted - sorted array of vectors wanted, or `NULL` to restore all vectors 400*f13dfd9eSBarry Smith - vecs - array of global vectors 401f73e5cebSJed Brown 402f73e5cebSJed Brown Level: advanced 403f73e5cebSJed Brown 404dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeRestoreAccess()`, `DMCompositeRestoreEntries()`, `DMCompositeScatter()`, `DMCompositeGather()` 405f73e5cebSJed Brown @*/ 406d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeRestoreAccessArray(DM dm, Vec pvec, PetscInt nwanted, const PetscInt *wanted, Vec *vecs) 407d71ae5a4SJacob Faibussowitsch { 408f73e5cebSJed Brown struct DMCompositeLink *link; 409f73e5cebSJed Brown PetscInt i, wnum; 410f73e5cebSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 411bee642f7SBarry Smith PetscInt readonly; 41271b14b3eSStefano Zampini PetscBool flg; 413f73e5cebSJed Brown 414f73e5cebSJed Brown PetscFunctionBegin; 415f73e5cebSJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 416f73e5cebSJed Brown PetscValidHeaderSpecific(pvec, VEC_CLASSID, 2); 4179566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 4187a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 41948a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 420f73e5cebSJed Brown 4219566063dSJacob Faibussowitsch PetscCall(VecLockGet(pvec, &readonly)); 422f73e5cebSJed Brown for (i = 0, wnum = 0, link = com->next; link && wnum < nwanted; i++, link = link->next) { 423f73e5cebSJed Brown if (!wanted || i == wanted[wnum]) { 4249566063dSJacob Faibussowitsch PetscCall(VecResetArray(vecs[wnum])); 42548a46eb9SPierre Jolivet if (readonly) PetscCall(VecLockReadPop(vecs[wnum])); 4269566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(link->dm, &vecs[wnum])); 427f73e5cebSJed Brown wnum++; 428f73e5cebSJed Brown } 429f73e5cebSJed Brown } 4303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 431f73e5cebSJed Brown } 432f73e5cebSJed Brown 4337ac2b803SAlex Fikl /*@C 434dce8aebaSBarry Smith DMCompositeRestoreLocalAccessArray - Returns the vectors obtained with `DMCompositeGetLocalAccessArray()`. 4357ac2b803SAlex Fikl 43620f4b53cSBarry Smith Collective 4377ac2b803SAlex Fikl 4387ac2b803SAlex Fikl Input Parameters: 439dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 4407ac2b803SAlex Fikl . pvec - packed vector 4417ac2b803SAlex Fikl . nwanted - number of vectors wanted 442*f13dfd9eSBarry Smith . wanted - sorted array of vectors wanted, or `NULL` to restore all vectors 443*f13dfd9eSBarry Smith - vecs - array of local vectors 4447ac2b803SAlex Fikl 4457ac2b803SAlex Fikl Level: advanced 4467ac2b803SAlex Fikl 447dce8aebaSBarry Smith Note: 448*f13dfd9eSBarry Smith `nwanted` and `wanted` must match the values given to `DMCompositeGetLocalAccessArray()` 4497ac2b803SAlex Fikl otherwise the call will fail. 4507ac2b803SAlex Fikl 451dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeGetLocalAccessArray()`, `DMCompositeRestoreAccessArray()`, 452db781477SPatrick Sanan `DMCompositeRestoreAccess()`, `DMCompositeRestoreEntries()`, 453db781477SPatrick Sanan `DMCompositeScatter()`, `DMCompositeGather()` 4547ac2b803SAlex Fikl @*/ 455d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeRestoreLocalAccessArray(DM dm, Vec pvec, PetscInt nwanted, const PetscInt *wanted, Vec *vecs) 456d71ae5a4SJacob Faibussowitsch { 4577ac2b803SAlex Fikl struct DMCompositeLink *link; 4587ac2b803SAlex Fikl PetscInt i, wnum; 4597ac2b803SAlex Fikl DM_Composite *com = (DM_Composite *)dm->data; 4607ac2b803SAlex Fikl PetscInt readonly; 46171b14b3eSStefano Zampini PetscBool flg; 4627ac2b803SAlex Fikl 4637ac2b803SAlex Fikl PetscFunctionBegin; 4647ac2b803SAlex Fikl PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 4657ac2b803SAlex Fikl PetscValidHeaderSpecific(pvec, VEC_CLASSID, 2); 4669566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 4677a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 46848a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 4697ac2b803SAlex Fikl 4709566063dSJacob Faibussowitsch PetscCall(VecLockGet(pvec, &readonly)); 4717ac2b803SAlex Fikl for (i = 0, wnum = 0, link = com->next; link && wnum < nwanted; i++, link = link->next) { 4727ac2b803SAlex Fikl if (!wanted || i == wanted[wnum]) { 4739566063dSJacob Faibussowitsch PetscCall(VecResetArray(vecs[wnum])); 47448a46eb9SPierre Jolivet if (readonly) PetscCall(VecLockReadPop(vecs[wnum])); 4759566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(link->dm, &vecs[wnum])); 4767ac2b803SAlex Fikl wnum++; 4777ac2b803SAlex Fikl } 4787ac2b803SAlex Fikl } 4793ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4807ac2b803SAlex Fikl } 4817ac2b803SAlex Fikl 48247c6ae99SBarry Smith /*@C 48347c6ae99SBarry Smith DMCompositeScatter - Scatters from a global packed vector into its individual local vectors 48447c6ae99SBarry Smith 48520f4b53cSBarry Smith Collective 48647c6ae99SBarry Smith 4879ae5db72SJed Brown Input Parameters: 488dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 48947c6ae99SBarry Smith . gvec - the global vector 490a4e35b19SJacob Faibussowitsch - ... - the individual sequential vectors, `NULL` for those that are not needed 49147c6ae99SBarry Smith 49247c6ae99SBarry Smith Level: advanced 49347c6ae99SBarry Smith 494dce8aebaSBarry Smith Note: 495dce8aebaSBarry Smith `DMCompositeScatterArray()` is a non-variadic alternative that is often more convenient for library callers and is 4966f3c3dcfSJed Brown accessible from Fortran. 4976f3c3dcfSJed Brown 498dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 499db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 500db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 501db781477SPatrick Sanan `DMCompositeScatterArray()` 50247c6ae99SBarry Smith @*/ 503d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeScatter(DM dm, Vec gvec, ...) 504d71ae5a4SJacob Faibussowitsch { 50547c6ae99SBarry Smith va_list Argp; 50647c6ae99SBarry Smith struct DMCompositeLink *next; 507c599c493SJunchao Zhang PETSC_UNUSED PetscInt cnt; 50847c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 50971b14b3eSStefano Zampini PetscBool flg; 51047c6ae99SBarry Smith 51147c6ae99SBarry Smith PetscFunctionBegin; 51247c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 51347c6ae99SBarry Smith PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 5149566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 5157a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 51648a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 51747c6ae99SBarry Smith 51815229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 51947c6ae99SBarry Smith va_start(Argp, gvec); 5208fd8f222SJed Brown for (cnt = 3, next = com->next; next; cnt++, next = next->next) { 5219ae5db72SJed Brown Vec local; 5229ae5db72SJed Brown local = va_arg(Argp, Vec); 5239ae5db72SJed Brown if (local) { 5249ae5db72SJed Brown Vec global; 5255edff71fSBarry Smith const PetscScalar *array; 52663a3b9bcSJacob Faibussowitsch PetscDisableStaticAnalyzerForExpressionUnderstandingThatThisIsDangerousAndBugprone(PetscValidHeaderSpecific(local, VEC_CLASSID, (int)cnt)); 5279566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 5289566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(gvec, &array)); 5299566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, array + next->rstart)); 5309566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(next->dm, global, INSERT_VALUES, local)); 5319566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(next->dm, global, INSERT_VALUES, local)); 5329566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(gvec, &array)); 5339566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 5349566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 53547c6ae99SBarry Smith } 53647c6ae99SBarry Smith } 53747c6ae99SBarry Smith va_end(Argp); 5383ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 53947c6ae99SBarry Smith } 54047c6ae99SBarry Smith 5416f3c3dcfSJed Brown /*@ 5426f3c3dcfSJed Brown DMCompositeScatterArray - Scatters from a global packed vector into its individual local vectors 5436f3c3dcfSJed Brown 54420f4b53cSBarry Smith Collective 5456f3c3dcfSJed Brown 5466f3c3dcfSJed Brown Input Parameters: 547dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 5486f3c3dcfSJed Brown . gvec - the global vector 549a2b725a8SWilliam Gropp - lvecs - array of local vectors, NULL for any that are not needed 5506f3c3dcfSJed Brown 5516f3c3dcfSJed Brown Level: advanced 5526f3c3dcfSJed Brown 5536f3c3dcfSJed Brown Note: 554dce8aebaSBarry Smith This is a non-variadic alternative to `DMCompositeScatter()` 5556f3c3dcfSJed Brown 556dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()` 557db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 558db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 5596f3c3dcfSJed Brown @*/ 560d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeScatterArray(DM dm, Vec gvec, Vec *lvecs) 561d71ae5a4SJacob Faibussowitsch { 5626f3c3dcfSJed Brown struct DMCompositeLink *next; 5636f3c3dcfSJed Brown PetscInt i; 5646f3c3dcfSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 56571b14b3eSStefano Zampini PetscBool flg; 5666f3c3dcfSJed Brown 5676f3c3dcfSJed Brown PetscFunctionBegin; 5686f3c3dcfSJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 5696f3c3dcfSJed Brown PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 5709566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 5717a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 57248a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 5736f3c3dcfSJed Brown 57415229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 5756f3c3dcfSJed Brown for (i = 0, next = com->next; next; next = next->next, i++) { 5766f3c3dcfSJed Brown if (lvecs[i]) { 5776f3c3dcfSJed Brown Vec global; 578c5d31e75SLisandro Dalcin const PetscScalar *array; 5796f3c3dcfSJed Brown PetscValidHeaderSpecific(lvecs[i], VEC_CLASSID, 3); 5809566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 5819566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(gvec, &array)); 5829566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, (PetscScalar *)array + next->rstart)); 5839566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(next->dm, global, INSERT_VALUES, lvecs[i])); 5849566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(next->dm, global, INSERT_VALUES, lvecs[i])); 5859566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(gvec, &array)); 5869566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 5879566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 5886f3c3dcfSJed Brown } 5896f3c3dcfSJed Brown } 5903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5916f3c3dcfSJed Brown } 5926f3c3dcfSJed Brown 59347c6ae99SBarry Smith /*@C 59447c6ae99SBarry Smith DMCompositeGather - Gathers into a global packed vector from its individual local vectors 59547c6ae99SBarry Smith 59620f4b53cSBarry Smith Collective 59747c6ae99SBarry Smith 598d8d19677SJose E. Roman Input Parameters: 599dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 600dce8aebaSBarry Smith . imode - `INSERT_VALUES` or `ADD_VALUES` 601a4e35b19SJacob Faibussowitsch . gvec - the global vector 602a4e35b19SJacob Faibussowitsch - ... - the individual sequential vectors, `NULL` for any that are not needed 60347c6ae99SBarry Smith 60447c6ae99SBarry Smith Level: advanced 60547c6ae99SBarry Smith 60660225df5SJacob Faibussowitsch Fortran Notes: 607dce8aebaSBarry Smith Fortran users should use `DMCompositeGatherArray()` 608f5f57ec0SBarry Smith 609dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 610db781477SPatrick Sanan `DMCompositeScatter()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 611db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 61247c6ae99SBarry Smith @*/ 613d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGather(DM dm, InsertMode imode, Vec gvec, ...) 614d71ae5a4SJacob Faibussowitsch { 61547c6ae99SBarry Smith va_list Argp; 61647c6ae99SBarry Smith struct DMCompositeLink *next; 61747c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 618c599c493SJunchao Zhang PETSC_UNUSED PetscInt cnt; 61971b14b3eSStefano Zampini PetscBool flg; 62047c6ae99SBarry Smith 62147c6ae99SBarry Smith PetscFunctionBegin; 62247c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 623064a246eSJacob Faibussowitsch PetscValidHeaderSpecific(gvec, VEC_CLASSID, 3); 6249566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 6257a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 62648a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 62747c6ae99SBarry Smith 62815229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 6291dac896bSSatish Balay va_start(Argp, gvec); 6308fd8f222SJed Brown for (cnt = 3, next = com->next; next; cnt++, next = next->next) { 6319ae5db72SJed Brown Vec local; 6329ae5db72SJed Brown local = va_arg(Argp, Vec); 6339ae5db72SJed Brown if (local) { 63447c6ae99SBarry Smith PetscScalar *array; 6359ae5db72SJed Brown Vec global; 63663a3b9bcSJacob Faibussowitsch PetscDisableStaticAnalyzerForExpressionUnderstandingThatThisIsDangerousAndBugprone(PetscValidHeaderSpecific(local, VEC_CLASSID, (int)cnt)); 6379566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 6389566063dSJacob Faibussowitsch PetscCall(VecGetArray(gvec, &array)); 6399566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, array + next->rstart)); 6409566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalBegin(next->dm, local, imode, global)); 6419566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalEnd(next->dm, local, imode, global)); 6429566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(gvec, &array)); 6439566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 6449566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 64547c6ae99SBarry Smith } 64647c6ae99SBarry Smith } 64747c6ae99SBarry Smith va_end(Argp); 6483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 64947c6ae99SBarry Smith } 65047c6ae99SBarry Smith 6516f3c3dcfSJed Brown /*@ 6526f3c3dcfSJed Brown DMCompositeGatherArray - Gathers into a global packed vector from its individual local vectors 6536f3c3dcfSJed Brown 65420f4b53cSBarry Smith Collective 6556f3c3dcfSJed Brown 656d8d19677SJose E. Roman Input Parameters: 657dce8aebaSBarry Smith + dm - the `DMCOMPOSITE` object 6586f3c3dcfSJed Brown . gvec - the global vector 659dce8aebaSBarry Smith . imode - `INSERT_VALUES` or `ADD_VALUES` 6606f3c3dcfSJed Brown - lvecs - the individual sequential vectors, NULL for any that are not needed 6616f3c3dcfSJed Brown 6626f3c3dcfSJed Brown Level: advanced 6636f3c3dcfSJed Brown 664dce8aebaSBarry Smith Note: 665dce8aebaSBarry Smith This is a non-variadic alternative to `DMCompositeGather()`. 6666f3c3dcfSJed Brown 667dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 668db781477SPatrick Sanan `DMCompositeScatter()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 669db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()`, 6706f3c3dcfSJed Brown @*/ 671d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGatherArray(DM dm, InsertMode imode, Vec gvec, Vec *lvecs) 672d71ae5a4SJacob Faibussowitsch { 6736f3c3dcfSJed Brown struct DMCompositeLink *next; 6746f3c3dcfSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 6756f3c3dcfSJed Brown PetscInt i; 67671b14b3eSStefano Zampini PetscBool flg; 6776f3c3dcfSJed Brown 6786f3c3dcfSJed Brown PetscFunctionBegin; 6796f3c3dcfSJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 680064a246eSJacob Faibussowitsch PetscValidHeaderSpecific(gvec, VEC_CLASSID, 3); 6819566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 6827a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 68348a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 6846f3c3dcfSJed Brown 68515229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 6866f3c3dcfSJed Brown for (next = com->next, i = 0; next; next = next->next, i++) { 6876f3c3dcfSJed Brown if (lvecs[i]) { 6886f3c3dcfSJed Brown PetscScalar *array; 6896f3c3dcfSJed Brown Vec global; 690064a246eSJacob Faibussowitsch PetscValidHeaderSpecific(lvecs[i], VEC_CLASSID, 4); 6919566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 6929566063dSJacob Faibussowitsch PetscCall(VecGetArray(gvec, &array)); 6939566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, array + next->rstart)); 6949566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalBegin(next->dm, lvecs[i], imode, global)); 6959566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalEnd(next->dm, lvecs[i], imode, global)); 6969566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(gvec, &array)); 6979566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 6989566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 6996f3c3dcfSJed Brown } 7006f3c3dcfSJed Brown } 7013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7026f3c3dcfSJed Brown } 7036f3c3dcfSJed Brown 704f5f57ec0SBarry Smith /*@ 705dce8aebaSBarry Smith DMCompositeAddDM - adds a `DM` vector to a `DMCOMPOSITE` 70647c6ae99SBarry Smith 70720f4b53cSBarry Smith Collective 70847c6ae99SBarry Smith 709d8d19677SJose E. Roman Input Parameters: 710dce8aebaSBarry Smith + dmc - the `DMCOMPOSITE` object 711dce8aebaSBarry Smith - dm - the `DM` object 71247c6ae99SBarry Smith 71347c6ae99SBarry Smith Level: advanced 71447c6ae99SBarry Smith 71542747ad1SJacob Faibussowitsch .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeGather()`, `DMCreateGlobalVector()`, 716db781477SPatrick Sanan `DMCompositeScatter()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 717db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 71847c6ae99SBarry Smith @*/ 719d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeAddDM(DM dmc, DM dm) 720d71ae5a4SJacob Faibussowitsch { 72106ebdd98SJed Brown PetscInt n, nlocal; 72247c6ae99SBarry Smith struct DMCompositeLink *mine, *next; 72306ebdd98SJed Brown Vec global, local; 72447c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dmc->data; 72571b14b3eSStefano Zampini PetscBool flg; 72647c6ae99SBarry Smith 72747c6ae99SBarry Smith PetscFunctionBegin; 72847c6ae99SBarry Smith PetscValidHeaderSpecific(dmc, DM_CLASSID, 1); 72947c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 2); 7309566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dmc, DMCOMPOSITE, &flg)); 7317a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 73247c6ae99SBarry Smith next = com->next; 73328b400f6SJacob Faibussowitsch PetscCheck(!com->setup, PetscObjectComm((PetscObject)dmc), PETSC_ERR_ARG_WRONGSTATE, "Cannot add a DM once you have used the DMComposite"); 73447c6ae99SBarry Smith 73547c6ae99SBarry Smith /* create new link */ 7369566063dSJacob Faibussowitsch PetscCall(PetscNew(&mine)); 7379566063dSJacob Faibussowitsch PetscCall(PetscObjectReference((PetscObject)dm)); 7389566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(dm, &global)); 7399566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(global, &n)); 7409566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(dm, &global)); 7419566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(dm, &local)); 7429566063dSJacob Faibussowitsch PetscCall(VecGetSize(local, &nlocal)); 7439566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(dm, &local)); 7448865f1eaSKarl Rupp 74547c6ae99SBarry Smith mine->n = n; 74606ebdd98SJed Brown mine->nlocal = nlocal; 74747c6ae99SBarry Smith mine->dm = dm; 7480298fd71SBarry Smith mine->next = NULL; 74947c6ae99SBarry Smith com->n += n; 7507ac2b803SAlex Fikl com->nghost += nlocal; 75147c6ae99SBarry Smith 75247c6ae99SBarry Smith /* add to end of list */ 7538865f1eaSKarl Rupp if (!next) com->next = mine; 7548865f1eaSKarl Rupp else { 75547c6ae99SBarry Smith while (next->next) next = next->next; 75647c6ae99SBarry Smith next->next = mine; 75747c6ae99SBarry Smith } 75847c6ae99SBarry Smith com->nDM++; 75947c6ae99SBarry Smith com->nmine++; 7603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 76147c6ae99SBarry Smith } 76247c6ae99SBarry Smith 7639804daf3SBarry Smith #include <petscdraw.h> 76426887b52SJed Brown PETSC_EXTERN PetscErrorCode VecView_MPI(Vec, PetscViewer); 76566976f2fSJacob Faibussowitsch static PetscErrorCode VecView_DMComposite(Vec gvec, PetscViewer viewer) 766d71ae5a4SJacob Faibussowitsch { 76747c6ae99SBarry Smith DM dm; 76847c6ae99SBarry Smith struct DMCompositeLink *next; 76947c6ae99SBarry Smith PetscBool isdraw; 770cef07954SSatish Balay DM_Composite *com; 77147c6ae99SBarry Smith 77247c6ae99SBarry Smith PetscFunctionBegin; 7739566063dSJacob Faibussowitsch PetscCall(VecGetDM(gvec, &dm)); 7747a8be351SBarry Smith PetscCheck(dm, PetscObjectComm((PetscObject)gvec), PETSC_ERR_ARG_WRONG, "Vector not generated from a DMComposite"); 77547c6ae99SBarry Smith com = (DM_Composite *)dm->data; 77647c6ae99SBarry Smith next = com->next; 77747c6ae99SBarry Smith 7789566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 77947c6ae99SBarry Smith if (!isdraw) { 78047c6ae99SBarry Smith /* do I really want to call this? */ 7819566063dSJacob Faibussowitsch PetscCall(VecView_MPI(gvec, viewer)); 78247c6ae99SBarry Smith } else { 78347c6ae99SBarry Smith PetscInt cnt = 0; 78447c6ae99SBarry Smith 78515229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 78647c6ae99SBarry Smith while (next) { 78747c6ae99SBarry Smith Vec vec; 788ca4278abSLisandro Dalcin const PetscScalar *array; 78947c6ae99SBarry Smith PetscInt bs; 79047c6ae99SBarry Smith 7919ae5db72SJed Brown /* Should use VecGetSubVector() eventually, but would need to forward the DM for that to work */ 7929566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &vec)); 7939566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(gvec, &array)); 7949566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(vec, (PetscScalar *)array + next->rstart)); 7959566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(gvec, &array)); 7969566063dSJacob Faibussowitsch PetscCall(VecView(vec, viewer)); 7979566063dSJacob Faibussowitsch PetscCall(VecResetArray(vec)); 7989566063dSJacob Faibussowitsch PetscCall(VecGetBlockSize(vec, &bs)); 7999566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &vec)); 8009566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawBaseAdd(viewer, bs)); 80147c6ae99SBarry Smith cnt += bs; 80247c6ae99SBarry Smith next = next->next; 80347c6ae99SBarry Smith } 8049566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawBaseAdd(viewer, -cnt)); 80547c6ae99SBarry Smith } 8063ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 80747c6ae99SBarry Smith } 80847c6ae99SBarry Smith 80966976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateGlobalVector_Composite(DM dm, Vec *gvec) 810d71ae5a4SJacob Faibussowitsch { 81147c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 81247c6ae99SBarry Smith 81347c6ae99SBarry Smith PetscFunctionBegin; 81447c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 8159566063dSJacob Faibussowitsch PetscCall(DMSetFromOptions(dm)); 8169566063dSJacob Faibussowitsch PetscCall(DMSetUp(dm)); 8179566063dSJacob Faibussowitsch PetscCall(VecCreate(PetscObjectComm((PetscObject)dm), gvec)); 8189566063dSJacob Faibussowitsch PetscCall(VecSetType(*gvec, dm->vectype)); 8199566063dSJacob Faibussowitsch PetscCall(VecSetSizes(*gvec, com->n, com->N)); 8209566063dSJacob Faibussowitsch PetscCall(VecSetDM(*gvec, dm)); 8219566063dSJacob Faibussowitsch PetscCall(VecSetOperation(*gvec, VECOP_VIEW, (void (*)(void))VecView_DMComposite)); 8223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 82347c6ae99SBarry Smith } 82447c6ae99SBarry Smith 82566976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateLocalVector_Composite(DM dm, Vec *lvec) 826d71ae5a4SJacob Faibussowitsch { 82747c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 82847c6ae99SBarry Smith 82947c6ae99SBarry Smith PetscFunctionBegin; 83047c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 83147c6ae99SBarry Smith if (!com->setup) { 8329566063dSJacob Faibussowitsch PetscCall(DMSetFromOptions(dm)); 8339566063dSJacob Faibussowitsch PetscCall(DMSetUp(dm)); 83447c6ae99SBarry Smith } 8359566063dSJacob Faibussowitsch PetscCall(VecCreate(PETSC_COMM_SELF, lvec)); 8369566063dSJacob Faibussowitsch PetscCall(VecSetType(*lvec, dm->vectype)); 8379566063dSJacob Faibussowitsch PetscCall(VecSetSizes(*lvec, com->nghost, PETSC_DECIDE)); 8389566063dSJacob Faibussowitsch PetscCall(VecSetDM(*lvec, dm)); 8393ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 84047c6ae99SBarry Smith } 84147c6ae99SBarry Smith 84247c6ae99SBarry Smith /*@C 843dce8aebaSBarry Smith DMCompositeGetISLocalToGlobalMappings - gets an `ISLocalToGlobalMapping` for each `DM` in the `DMCOMPOSITE`, maps to the composite global space 84447c6ae99SBarry Smith 84520f4b53cSBarry Smith Collective; No Fortran Support 84647c6ae99SBarry Smith 84747c6ae99SBarry Smith Input Parameter: 848dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 84947c6ae99SBarry Smith 8502fe279fdSBarry Smith Output Parameter: 8519ae5db72SJed Brown . ltogs - the individual mappings for each packed vector. Note that this includes 852dce8aebaSBarry Smith all the ghost points that individual ghosted `DMDA` may have. 85347c6ae99SBarry Smith 85447c6ae99SBarry Smith Level: advanced 85547c6ae99SBarry Smith 856dce8aebaSBarry Smith Note: 857*f13dfd9eSBarry Smith Each entry of `ltogs` should be destroyed with `ISLocalToGlobalMappingDestroy()`, `ltogs` should be freed with `PetscFree()`. 85847c6ae99SBarry Smith 859dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 860db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetAccess()`, `DMCompositeScatter()`, 861c2e3fba1SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 86247c6ae99SBarry Smith @*/ 863d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetISLocalToGlobalMappings(DM dm, ISLocalToGlobalMapping **ltogs) 864d71ae5a4SJacob Faibussowitsch { 86547c6ae99SBarry Smith PetscInt i, *idx, n, cnt; 86647c6ae99SBarry Smith struct DMCompositeLink *next; 86747c6ae99SBarry Smith PetscMPIInt rank; 86847c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 86971b14b3eSStefano Zampini PetscBool flg; 87047c6ae99SBarry Smith 87147c6ae99SBarry Smith PetscFunctionBegin; 87247c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 8739566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 8747a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 8759566063dSJacob Faibussowitsch PetscCall(DMSetUp(dm)); 8769566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(com->nDM, ltogs)); 87747c6ae99SBarry Smith next = com->next; 8789566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)dm), &rank)); 87947c6ae99SBarry Smith 88015229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 88147c6ae99SBarry Smith cnt = 0; 88247c6ae99SBarry Smith while (next) { 8836eb61c8cSJed Brown ISLocalToGlobalMapping ltog; 8846eb61c8cSJed Brown PetscMPIInt size; 88586994e45SJed Brown const PetscInt *suboff, *indices; 8866eb61c8cSJed Brown Vec global; 88747c6ae99SBarry Smith 8886eb61c8cSJed Brown /* Get sub-DM global indices for each local dof */ 8899566063dSJacob Faibussowitsch PetscCall(DMGetLocalToGlobalMapping(next->dm, <og)); 8909566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetSize(ltog, &n)); 8919566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetIndices(ltog, &indices)); 8929566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &idx)); 89347c6ae99SBarry Smith 8946eb61c8cSJed Brown /* Get the offsets for the sub-DM global vector */ 8959566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 8969566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRanges(global, &suboff)); 8979566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)global), &size)); 8986eb61c8cSJed Brown 8996eb61c8cSJed Brown /* Shift the sub-DM definition of the global space to the composite global space */ 9006eb61c8cSJed Brown for (i = 0; i < n; i++) { 90186994e45SJed Brown PetscInt subi = indices[i], lo = 0, hi = size, t; 902e333b035SStefano Zampini /* There's no consensus on what a negative index means, 903e333b035SStefano Zampini except for skipping when setting the values in vectors and matrices */ 9049371c9d4SSatish Balay if (subi < 0) { 9059371c9d4SSatish Balay idx[i] = subi - next->grstarts[rank]; 9069371c9d4SSatish Balay continue; 9079371c9d4SSatish Balay } 9086eb61c8cSJed Brown /* Binary search to find which rank owns subi */ 9096eb61c8cSJed Brown while (hi - lo > 1) { 9106eb61c8cSJed Brown t = lo + (hi - lo) / 2; 9116eb61c8cSJed Brown if (suboff[t] > subi) hi = t; 9126eb61c8cSJed Brown else lo = t; 9136eb61c8cSJed Brown } 9146eb61c8cSJed Brown idx[i] = subi - suboff[lo] + next->grstarts[lo]; 9156eb61c8cSJed Brown } 9169566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRestoreIndices(ltog, &indices)); 9179566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingCreate(PetscObjectComm((PetscObject)dm), 1, n, idx, PETSC_OWN_POINTER, &(*ltogs)[cnt])); 9189566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 91947c6ae99SBarry Smith next = next->next; 92047c6ae99SBarry Smith cnt++; 92147c6ae99SBarry Smith } 9223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 92347c6ae99SBarry Smith } 92447c6ae99SBarry Smith 92587c85e80SJed Brown /*@C 9269ae5db72SJed Brown DMCompositeGetLocalISs - Gets index sets for each component of a composite local vector 92787c85e80SJed Brown 92820f4b53cSBarry Smith Not Collective; No Fortran Support 92987c85e80SJed Brown 9304165533cSJose E. Roman Input Parameter: 931dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` 93287c85e80SJed Brown 9334165533cSJose E. Roman Output Parameter: 93415229ffcSPierre Jolivet . is - array of serial index sets for each component of the `DMCOMPOSITE` 93587c85e80SJed Brown 93687c85e80SJed Brown Level: intermediate 93787c85e80SJed Brown 93887c85e80SJed Brown Notes: 93987c85e80SJed Brown At present, a composite local vector does not normally exist. This function is used to provide index sets for 94015229ffcSPierre Jolivet `MatGetLocalSubMatrix()`. In the future, the scatters for each entry in the `DMCOMPOSITE` may be merged into a single 9419ae5db72SJed Brown scatter to a composite local vector. The user should not typically need to know which is being done. 94287c85e80SJed Brown 943dce8aebaSBarry Smith To get the composite global indices at all local points (including ghosts), use `DMCompositeGetISLocalToGlobalMappings()`. 94487c85e80SJed Brown 945dce8aebaSBarry Smith To get index sets for pieces of the composite global vector, use `DMCompositeGetGlobalISs()`. 94687c85e80SJed Brown 947dce8aebaSBarry Smith Each returned `IS` should be destroyed with `ISDestroy()`, the array should be freed with `PetscFree()`. 94887c85e80SJed Brown 949*f13dfd9eSBarry Smith Fortran Note: 950*f13dfd9eSBarry Smith Pass in an array long enough to hold all the `IS`, see `DMCompositeGetNumberDM()` 951*f13dfd9eSBarry Smith 952*f13dfd9eSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMCompositeGetGlobalISs()`, `DMCompositeGetISLocalToGlobalMappings()`, `MatGetLocalSubMatrix()`, 953*f13dfd9eSBarry Smith `MatCreateLocalRef()`, `DMCompositeGetNumberDM()` 95487c85e80SJed Brown @*/ 955d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetLocalISs(DM dm, IS **is) 956d71ae5a4SJacob Faibussowitsch { 95787c85e80SJed Brown DM_Composite *com = (DM_Composite *)dm->data; 95887c85e80SJed Brown struct DMCompositeLink *link; 95987c85e80SJed Brown PetscInt cnt, start; 96071b14b3eSStefano Zampini PetscBool flg; 96187c85e80SJed Brown 96287c85e80SJed Brown PetscFunctionBegin; 96387c85e80SJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 9644f572ea9SToby Isaac PetscAssertPointer(is, 2); 9659566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 9667a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 9679566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(com->nmine, is)); 96806ebdd98SJed Brown for (cnt = 0, start = 0, link = com->next; link; start += link->nlocal, cnt++, link = link->next) { 969520db06cSJed Brown PetscInt bs; 9709566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, link->nlocal, start, 1, &(*is)[cnt])); 9719566063dSJacob Faibussowitsch PetscCall(DMGetBlockSize(link->dm, &bs)); 9729566063dSJacob Faibussowitsch PetscCall(ISSetBlockSize((*is)[cnt], bs)); 973520db06cSJed Brown } 9743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 97587c85e80SJed Brown } 97687c85e80SJed Brown 97747c6ae99SBarry Smith /*@C 978dce8aebaSBarry Smith DMCompositeGetGlobalISs - Gets the index sets for each composed object in a `DMCOMPOSITE` 97947c6ae99SBarry Smith 98020f4b53cSBarry Smith Collective 98147c6ae99SBarry Smith 98247c6ae99SBarry Smith Input Parameter: 983dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 98447c6ae99SBarry Smith 9852fe279fdSBarry Smith Output Parameter: 98647c6ae99SBarry Smith . is - the array of index sets 98747c6ae99SBarry Smith 98847c6ae99SBarry Smith Level: advanced 98947c6ae99SBarry Smith 99047c6ae99SBarry Smith Notes: 991*f13dfd9eSBarry Smith The `is` entries should be destroyed with `ISDestroy()`, `is` should be freed with `PetscFree()` 99247c6ae99SBarry Smith 99347c6ae99SBarry Smith These could be used to extract a subset of vector entries for a "multi-physics" preconditioner 99447c6ae99SBarry Smith 995dce8aebaSBarry Smith Use `DMCompositeGetLocalISs()` for index sets in the packed local numbering, and 996dce8aebaSBarry Smith `DMCompositeGetISLocalToGlobalMappings()` for to map local sub-`DM` (including ghost) indices to packed global 9976eb61c8cSJed Brown indices. 99847c6ae99SBarry Smith 99960225df5SJacob Faibussowitsch Fortran Notes: 1000dce8aebaSBarry Smith The output argument 'is' must be an allocated array of sufficient length, which can be learned using `DMCompositeGetNumberDM()`. 1001f3cb0f7eSJed Brown 1002dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 1003db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetAccess()`, `DMCompositeScatter()`, 1004c2e3fba1SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 100547c6ae99SBarry Smith @*/ 1006d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetGlobalISs(DM dm, IS *is[]) 1007d71ae5a4SJacob Faibussowitsch { 100866bb578eSMark Adams PetscInt cnt = 0; 100947c6ae99SBarry Smith struct DMCompositeLink *next; 101047c6ae99SBarry Smith PetscMPIInt rank; 101147c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 101271b14b3eSStefano Zampini PetscBool flg; 101347c6ae99SBarry Smith 101447c6ae99SBarry Smith PetscFunctionBegin; 101547c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 10169566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 10177a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 10187a8be351SBarry Smith PetscCheck(dm->setupcalled, PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONGSTATE, "Must call DMSetUp() before"); 10199566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(com->nDM, is)); 102047c6ae99SBarry Smith next = com->next; 10219566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)dm), &rank)); 102247c6ae99SBarry Smith 102315229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 102447c6ae99SBarry Smith while (next) { 1025e5e52638SMatthew G. Knepley PetscDS prob; 1026e5e52638SMatthew G. Knepley 10279566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PetscObjectComm((PetscObject)dm), next->n, next->grstart, 1, &(*is)[cnt])); 10289566063dSJacob Faibussowitsch PetscCall(DMGetDS(dm, &prob)); 1029e5e52638SMatthew G. Knepley if (prob) { 103065c226d8SMatthew G. Knepley MatNullSpace space; 103165c226d8SMatthew G. Knepley Mat pmat; 10320f21e855SMatthew G. Knepley PetscObject disc; 10330f21e855SMatthew G. Knepley PetscInt Nf; 103465c226d8SMatthew G. Knepley 10359566063dSJacob Faibussowitsch PetscCall(PetscDSGetNumFields(prob, &Nf)); 1036f24dd8d2SMatthew G. Knepley if (cnt < Nf) { 10379566063dSJacob Faibussowitsch PetscCall(PetscDSGetDiscretization(prob, cnt, &disc)); 10389566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery(disc, "nullspace", (PetscObject *)&space)); 10399566063dSJacob Faibussowitsch if (space) PetscCall(PetscObjectCompose((PetscObject)(*is)[cnt], "nullspace", (PetscObject)space)); 10409566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery(disc, "nearnullspace", (PetscObject *)&space)); 10419566063dSJacob Faibussowitsch if (space) PetscCall(PetscObjectCompose((PetscObject)(*is)[cnt], "nearnullspace", (PetscObject)space)); 10429566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery(disc, "pmat", (PetscObject *)&pmat)); 10439566063dSJacob Faibussowitsch if (pmat) PetscCall(PetscObjectCompose((PetscObject)(*is)[cnt], "pmat", (PetscObject)pmat)); 104465c226d8SMatthew G. Knepley } 1045f24dd8d2SMatthew G. Knepley } 104647c6ae99SBarry Smith cnt++; 104747c6ae99SBarry Smith next = next->next; 104847c6ae99SBarry Smith } 10493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 105047c6ae99SBarry Smith } 105147c6ae99SBarry Smith 105266976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateFieldIS_Composite(DM dm, PetscInt *numFields, char ***fieldNames, IS **fields) 1053d71ae5a4SJacob Faibussowitsch { 10544d343eeaSMatthew G Knepley PetscInt nDM; 10554d343eeaSMatthew G Knepley DM *dms; 10564d343eeaSMatthew G Knepley PetscInt i; 10574d343eeaSMatthew G Knepley 10584d343eeaSMatthew G Knepley PetscFunctionBegin; 10599566063dSJacob Faibussowitsch PetscCall(DMCompositeGetNumberDM(dm, &nDM)); 10608865f1eaSKarl Rupp if (numFields) *numFields = nDM; 10619566063dSJacob Faibussowitsch PetscCall(DMCompositeGetGlobalISs(dm, fields)); 10624d343eeaSMatthew G Knepley if (fieldNames) { 10639566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nDM, &dms)); 10649566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nDM, fieldNames)); 10659566063dSJacob Faibussowitsch PetscCall(DMCompositeGetEntriesArray(dm, dms)); 10664d343eeaSMatthew G Knepley for (i = 0; i < nDM; i++) { 10674d343eeaSMatthew G Knepley char buf[256]; 10684d343eeaSMatthew G Knepley const char *splitname; 10694d343eeaSMatthew G Knepley 10704d343eeaSMatthew G Knepley /* Split naming precedence: object name, prefix, number */ 10714d343eeaSMatthew G Knepley splitname = ((PetscObject)dm)->name; 10724d343eeaSMatthew G Knepley if (!splitname) { 10739566063dSJacob Faibussowitsch PetscCall(PetscObjectGetOptionsPrefix((PetscObject)dms[i], &splitname)); 10744d343eeaSMatthew G Knepley if (splitname) { 10754d343eeaSMatthew G Knepley size_t len; 10769566063dSJacob Faibussowitsch PetscCall(PetscStrncpy(buf, splitname, sizeof(buf))); 10778caf3d72SBarry Smith buf[sizeof(buf) - 1] = 0; 10789566063dSJacob Faibussowitsch PetscCall(PetscStrlen(buf, &len)); 10794d343eeaSMatthew G Knepley if (buf[len - 1] == '_') buf[len - 1] = 0; /* Remove trailing underscore if it was used */ 10804d343eeaSMatthew G Knepley splitname = buf; 10814d343eeaSMatthew G Knepley } 10824d343eeaSMatthew G Knepley } 10834d343eeaSMatthew G Knepley if (!splitname) { 108463a3b9bcSJacob Faibussowitsch PetscCall(PetscSNPrintf(buf, sizeof(buf), "%" PetscInt_FMT, i)); 10854d343eeaSMatthew G Knepley splitname = buf; 10864d343eeaSMatthew G Knepley } 10879566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(splitname, &(*fieldNames)[i])); 10884d343eeaSMatthew G Knepley } 10899566063dSJacob Faibussowitsch PetscCall(PetscFree(dms)); 10904d343eeaSMatthew G Knepley } 10913ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 10924d343eeaSMatthew G Knepley } 10934d343eeaSMatthew G Knepley 1094e7c4fc90SDmitry Karpeev /* 1095e7c4fc90SDmitry Karpeev This could take over from DMCreateFieldIS(), as it is more general, 10960298fd71SBarry Smith making DMCreateFieldIS() a special case -- calling with dmlist == NULL; 1097e7c4fc90SDmitry Karpeev At this point it's probably best to be less intrusive, however. 1098e7c4fc90SDmitry Karpeev */ 109966976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateFieldDecomposition_Composite(DM dm, PetscInt *len, char ***namelist, IS **islist, DM **dmlist) 1100d71ae5a4SJacob Faibussowitsch { 1101e7c4fc90SDmitry Karpeev PetscInt nDM; 1102e7c4fc90SDmitry Karpeev PetscInt i; 1103e7c4fc90SDmitry Karpeev 1104e7c4fc90SDmitry Karpeev PetscFunctionBegin; 11059566063dSJacob Faibussowitsch PetscCall(DMCreateFieldIS_Composite(dm, len, namelist, islist)); 1106e7c4fc90SDmitry Karpeev if (dmlist) { 11079566063dSJacob Faibussowitsch PetscCall(DMCompositeGetNumberDM(dm, &nDM)); 11089566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nDM, dmlist)); 11099566063dSJacob Faibussowitsch PetscCall(DMCompositeGetEntriesArray(dm, *dmlist)); 111048a46eb9SPierre Jolivet for (i = 0; i < nDM; i++) PetscCall(PetscObjectReference((PetscObject)((*dmlist)[i]))); 1111e7c4fc90SDmitry Karpeev } 11123ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1113e7c4fc90SDmitry Karpeev } 1114e7c4fc90SDmitry Karpeev 111547c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 111647c6ae99SBarry Smith /*@C 1117dce8aebaSBarry Smith DMCompositeGetLocalVectors - Gets local vectors for each part of a `DMCOMPOSITE` 1118dce8aebaSBarry Smith Use `DMCompositeRestoreLocalVectors()` to return them. 111947c6ae99SBarry Smith 112020f4b53cSBarry Smith Not Collective; No Fortran Support 112147c6ae99SBarry Smith 112247c6ae99SBarry Smith Input Parameter: 1123dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 112447c6ae99SBarry Smith 112547c6ae99SBarry Smith Output Parameter: 1126a4e35b19SJacob Faibussowitsch . ... - the individual sequential `Vec`s 112747c6ae99SBarry Smith 112847c6ae99SBarry Smith Level: advanced 112947c6ae99SBarry Smith 1130dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 1131db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 1132db781477SPatrick Sanan `DMCompositeRestoreLocalVectors()`, `DMCompositeScatter()`, `DMCompositeGetEntries()` 113347c6ae99SBarry Smith @*/ 1134d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetLocalVectors(DM dm, ...) 1135d71ae5a4SJacob Faibussowitsch { 113647c6ae99SBarry Smith va_list Argp; 113747c6ae99SBarry Smith struct DMCompositeLink *next; 113847c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 113971b14b3eSStefano Zampini PetscBool flg; 114047c6ae99SBarry Smith 114147c6ae99SBarry Smith PetscFunctionBegin; 114247c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 11439566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 11447a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 114547c6ae99SBarry Smith next = com->next; 114615229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 114747c6ae99SBarry Smith va_start(Argp, dm); 114847c6ae99SBarry Smith while (next) { 114947c6ae99SBarry Smith Vec *vec; 115047c6ae99SBarry Smith vec = va_arg(Argp, Vec *); 11519566063dSJacob Faibussowitsch if (vec) PetscCall(DMGetLocalVector(next->dm, vec)); 115247c6ae99SBarry Smith next = next->next; 115347c6ae99SBarry Smith } 115447c6ae99SBarry Smith va_end(Argp); 11553ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 115647c6ae99SBarry Smith } 115747c6ae99SBarry Smith 115847c6ae99SBarry Smith /*@C 1159dce8aebaSBarry Smith DMCompositeRestoreLocalVectors - Restores local vectors for each part of a `DMCOMPOSITE` 116047c6ae99SBarry Smith 116120f4b53cSBarry Smith Not Collective; No Fortran Support 116247c6ae99SBarry Smith 116347c6ae99SBarry Smith Input Parameter: 1164dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 116547c6ae99SBarry Smith 116647c6ae99SBarry Smith Output Parameter: 1167a4e35b19SJacob Faibussowitsch . ... - the individual sequential `Vec` 116847c6ae99SBarry Smith 116947c6ae99SBarry Smith Level: advanced 117047c6ae99SBarry Smith 1171dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, 1172db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 1173db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeScatter()`, `DMCompositeGetEntries()` 117447c6ae99SBarry Smith @*/ 1175d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeRestoreLocalVectors(DM dm, ...) 1176d71ae5a4SJacob Faibussowitsch { 117747c6ae99SBarry Smith va_list Argp; 117847c6ae99SBarry Smith struct DMCompositeLink *next; 117947c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 118071b14b3eSStefano Zampini PetscBool flg; 118147c6ae99SBarry Smith 118247c6ae99SBarry Smith PetscFunctionBegin; 118347c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 11849566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 11857a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 118647c6ae99SBarry Smith next = com->next; 118715229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 118847c6ae99SBarry Smith va_start(Argp, dm); 118947c6ae99SBarry Smith while (next) { 119047c6ae99SBarry Smith Vec *vec; 119147c6ae99SBarry Smith vec = va_arg(Argp, Vec *); 11929566063dSJacob Faibussowitsch if (vec) PetscCall(DMRestoreLocalVector(next->dm, vec)); 119347c6ae99SBarry Smith next = next->next; 119447c6ae99SBarry Smith } 119547c6ae99SBarry Smith va_end(Argp); 11963ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 119747c6ae99SBarry Smith } 119847c6ae99SBarry Smith 119947c6ae99SBarry Smith /* -------------------------------------------------------------------------------------*/ 120047c6ae99SBarry Smith /*@C 1201dce8aebaSBarry Smith DMCompositeGetEntries - Gets the `DM` for each entry in a `DMCOMPOSITE`. 120247c6ae99SBarry Smith 120347c6ae99SBarry Smith Not Collective 120447c6ae99SBarry Smith 120547c6ae99SBarry Smith Input Parameter: 1206dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 120747c6ae99SBarry Smith 120847c6ae99SBarry Smith Output Parameter: 1209a4e35b19SJacob Faibussowitsch . ... - the individual entries `DM` 121047c6ae99SBarry Smith 121147c6ae99SBarry Smith Level: advanced 121247c6ae99SBarry Smith 121360225df5SJacob Faibussowitsch Fortran Notes: 1214dce8aebaSBarry Smith Available as `DMCompositeGetEntries()` for one output `DM`, DMCompositeGetEntries2() for 2, etc 1215f5f57ec0SBarry Smith 1216dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, `DMCompositeGetEntriesArray()` 1217db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 121860225df5SJacob Faibussowitsch `DMCompositeRestoreLocalVectors()`, `DMCompositeGetLocalVectors()`, `DMCompositeScatter()` 121947c6ae99SBarry Smith @*/ 1220d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetEntries(DM dm, ...) 1221d71ae5a4SJacob Faibussowitsch { 122247c6ae99SBarry Smith va_list Argp; 122347c6ae99SBarry Smith struct DMCompositeLink *next; 122447c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 122571b14b3eSStefano Zampini PetscBool flg; 122647c6ae99SBarry Smith 122747c6ae99SBarry Smith PetscFunctionBegin; 122847c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 12299566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 12307a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 123147c6ae99SBarry Smith next = com->next; 123215229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 123347c6ae99SBarry Smith va_start(Argp, dm); 123447c6ae99SBarry Smith while (next) { 123547c6ae99SBarry Smith DM *dmn; 123647c6ae99SBarry Smith dmn = va_arg(Argp, DM *); 12379ae5db72SJed Brown if (dmn) *dmn = next->dm; 123847c6ae99SBarry Smith next = next->next; 123947c6ae99SBarry Smith } 124047c6ae99SBarry Smith va_end(Argp); 12413ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 124247c6ae99SBarry Smith } 124347c6ae99SBarry Smith 1244dbab29e1SMark F. Adams /*@C 1245dce8aebaSBarry Smith DMCompositeGetEntriesArray - Gets the DM for each entry in a `DMCOMPOSITE` 12462fa5ba8aSJed Brown 12472fa5ba8aSJed Brown Not Collective 12482fa5ba8aSJed Brown 12492fa5ba8aSJed Brown Input Parameter: 1250dce8aebaSBarry Smith . dm - the `DMCOMPOSITE` object 1251907376e6SBarry Smith 1252907376e6SBarry Smith Output Parameter: 1253dce8aebaSBarry Smith . dms - array of sufficient length (see `DMCompositeGetNumberDM()`) to hold the individual `DM` 12542fa5ba8aSJed Brown 12552fa5ba8aSJed Brown Level: advanced 12562fa5ba8aSJed Brown 1257dce8aebaSBarry Smith .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCreateGlobalVector()`, `DMCompositeGetEntries()` 1258db781477SPatrick Sanan `DMCompositeGather()`, `DMCompositeCreate()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()`, 125960225df5SJacob Faibussowitsch `DMCompositeRestoreLocalVectors()`, `DMCompositeGetLocalVectors()`, `DMCompositeScatter()` 12602fa5ba8aSJed Brown @*/ 1261d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeGetEntriesArray(DM dm, DM dms[]) 1262d71ae5a4SJacob Faibussowitsch { 12632fa5ba8aSJed Brown struct DMCompositeLink *next; 12642fa5ba8aSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 12652fa5ba8aSJed Brown PetscInt i; 126671b14b3eSStefano Zampini PetscBool flg; 12672fa5ba8aSJed Brown 12682fa5ba8aSJed Brown PetscFunctionBegin; 12692fa5ba8aSJed Brown PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 12709566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMCOMPOSITE, &flg)); 12717a8be351SBarry Smith PetscCheck(flg, PetscObjectComm((PetscObject)dm), PETSC_ERR_USER, "Not for type %s", ((PetscObject)dm)->type_name); 127215229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 12732fa5ba8aSJed Brown for (next = com->next, i = 0; next; next = next->next, i++) dms[i] = next->dm; 12743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12752fa5ba8aSJed Brown } 12762fa5ba8aSJed Brown 1277e10fd815SStefano Zampini typedef struct { 1278e10fd815SStefano Zampini DM dm; 1279e10fd815SStefano Zampini PetscViewer *subv; 1280e10fd815SStefano Zampini Vec *vecs; 1281e10fd815SStefano Zampini } GLVisViewerCtx; 1282e10fd815SStefano Zampini 1283d71ae5a4SJacob Faibussowitsch static PetscErrorCode DestroyGLVisViewerCtx_Private(void *vctx) 1284d71ae5a4SJacob Faibussowitsch { 1285e10fd815SStefano Zampini GLVisViewerCtx *ctx = (GLVisViewerCtx *)vctx; 1286e10fd815SStefano Zampini PetscInt i, n; 1287e10fd815SStefano Zampini 1288e10fd815SStefano Zampini PetscFunctionBegin; 12899566063dSJacob Faibussowitsch PetscCall(DMCompositeGetNumberDM(ctx->dm, &n)); 129048a46eb9SPierre Jolivet for (i = 0; i < n; i++) PetscCall(PetscViewerDestroy(&ctx->subv[i])); 12919566063dSJacob Faibussowitsch PetscCall(PetscFree2(ctx->subv, ctx->vecs)); 12929566063dSJacob Faibussowitsch PetscCall(DMDestroy(&ctx->dm)); 12939566063dSJacob Faibussowitsch PetscCall(PetscFree(ctx)); 12943ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1295e10fd815SStefano Zampini } 1296e10fd815SStefano Zampini 1297d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMCompositeSampleGLVisFields_Private(PetscObject oX, PetscInt nf, PetscObject oXfield[], void *vctx) 1298d71ae5a4SJacob Faibussowitsch { 1299e10fd815SStefano Zampini Vec X = (Vec)oX; 1300e10fd815SStefano Zampini GLVisViewerCtx *ctx = (GLVisViewerCtx *)vctx; 1301e10fd815SStefano Zampini PetscInt i, n, cumf; 1302e10fd815SStefano Zampini 1303e10fd815SStefano Zampini PetscFunctionBegin; 13049566063dSJacob Faibussowitsch PetscCall(DMCompositeGetNumberDM(ctx->dm, &n)); 13059566063dSJacob Faibussowitsch PetscCall(DMCompositeGetAccessArray(ctx->dm, X, n, NULL, ctx->vecs)); 1306e10fd815SStefano Zampini for (i = 0, cumf = 0; i < n; i++) { 1307e10fd815SStefano Zampini PetscErrorCode (*g2l)(PetscObject, PetscInt, PetscObject[], void *); 1308e10fd815SStefano Zampini void *fctx; 1309e10fd815SStefano Zampini PetscInt nfi; 1310e10fd815SStefano Zampini 131134e79e72SJacob Faibussowitsch PetscCall(PetscViewerGLVisGetFields_Internal(ctx->subv[i], &nfi, NULL, NULL, &g2l, NULL, &fctx)); 1312e10fd815SStefano Zampini if (!nfi) continue; 13131baa6e33SBarry Smith if (g2l) PetscCall((*g2l)((PetscObject)ctx->vecs[i], nfi, oXfield + cumf, fctx)); 1314f4f49eeaSPierre Jolivet else PetscCall(VecCopy(ctx->vecs[i], (Vec)oXfield[cumf])); 1315e10fd815SStefano Zampini cumf += nfi; 1316e10fd815SStefano Zampini } 13179566063dSJacob Faibussowitsch PetscCall(DMCompositeRestoreAccessArray(ctx->dm, X, n, NULL, ctx->vecs)); 13183ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1319e10fd815SStefano Zampini } 1320e10fd815SStefano Zampini 1321d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMSetUpGLVisViewer_Composite(PetscObject odm, PetscViewer viewer) 1322d71ae5a4SJacob Faibussowitsch { 1323e10fd815SStefano Zampini DM dm = (DM)odm, *dms; 1324e10fd815SStefano Zampini Vec *Ufds; 1325e10fd815SStefano Zampini GLVisViewerCtx *ctx; 1326e10fd815SStefano Zampini PetscInt i, n, tnf, *sdim; 1327e10fd815SStefano Zampini char **fecs; 1328e10fd815SStefano Zampini 1329e10fd815SStefano Zampini PetscFunctionBegin; 13309566063dSJacob Faibussowitsch PetscCall(PetscNew(&ctx)); 13319566063dSJacob Faibussowitsch PetscCall(PetscObjectReference((PetscObject)dm)); 1332e10fd815SStefano Zampini ctx->dm = dm; 13339566063dSJacob Faibussowitsch PetscCall(DMCompositeGetNumberDM(dm, &n)); 13349566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &dms)); 13359566063dSJacob Faibussowitsch PetscCall(DMCompositeGetEntriesArray(dm, dms)); 13369566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(n, &ctx->subv, n, &ctx->vecs)); 1337e10fd815SStefano Zampini for (i = 0, tnf = 0; i < n; i++) { 1338e10fd815SStefano Zampini PetscInt nf; 1339e10fd815SStefano Zampini 13409566063dSJacob Faibussowitsch PetscCall(PetscViewerCreate(PetscObjectComm(odm), &ctx->subv[i])); 13419566063dSJacob Faibussowitsch PetscCall(PetscViewerSetType(ctx->subv[i], PETSCVIEWERGLVIS)); 134234e79e72SJacob Faibussowitsch PetscCall(PetscViewerGLVisSetDM_Internal(ctx->subv[i], (PetscObject)dms[i])); 134334e79e72SJacob Faibussowitsch PetscCall(PetscViewerGLVisGetFields_Internal(ctx->subv[i], &nf, NULL, NULL, NULL, NULL, NULL)); 1344e10fd815SStefano Zampini tnf += nf; 1345e10fd815SStefano Zampini } 13469566063dSJacob Faibussowitsch PetscCall(PetscFree(dms)); 13479566063dSJacob Faibussowitsch PetscCall(PetscMalloc3(tnf, &fecs, tnf, &sdim, tnf, &Ufds)); 1348e10fd815SStefano Zampini for (i = 0, tnf = 0; i < n; i++) { 1349e10fd815SStefano Zampini PetscInt *sd, nf, f; 1350e10fd815SStefano Zampini const char **fec; 1351e10fd815SStefano Zampini Vec *Uf; 1352e10fd815SStefano Zampini 135334e79e72SJacob Faibussowitsch PetscCall(PetscViewerGLVisGetFields_Internal(ctx->subv[i], &nf, &fec, &sd, NULL, (PetscObject **)&Uf, NULL)); 1354e10fd815SStefano Zampini for (f = 0; f < nf; f++) { 13559566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(fec[f], &fecs[tnf + f])); 1356e10fd815SStefano Zampini Ufds[tnf + f] = Uf[f]; 1357e10fd815SStefano Zampini sdim[tnf + f] = sd[f]; 1358e10fd815SStefano Zampini } 1359e10fd815SStefano Zampini tnf += nf; 1360e10fd815SStefano Zampini } 13619566063dSJacob Faibussowitsch PetscCall(PetscViewerGLVisSetFields(viewer, tnf, (const char **)fecs, sdim, DMCompositeSampleGLVisFields_Private, (PetscObject *)Ufds, ctx, DestroyGLVisViewerCtx_Private)); 136248a46eb9SPierre Jolivet for (i = 0; i < tnf; i++) PetscCall(PetscFree(fecs[i])); 13639566063dSJacob Faibussowitsch PetscCall(PetscFree3(fecs, sdim, Ufds)); 13643ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1365e10fd815SStefano Zampini } 1366e10fd815SStefano Zampini 136766976f2fSJacob Faibussowitsch static PetscErrorCode DMRefine_Composite(DM dmi, MPI_Comm comm, DM *fine) 1368d71ae5a4SJacob Faibussowitsch { 136947c6ae99SBarry Smith struct DMCompositeLink *next; 137047c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dmi->data; 137147c6ae99SBarry Smith DM dm; 137247c6ae99SBarry Smith 137347c6ae99SBarry Smith PetscFunctionBegin; 137447c6ae99SBarry Smith PetscValidHeaderSpecific(dmi, DM_CLASSID, 1); 137548a46eb9SPierre Jolivet if (comm == MPI_COMM_NULL) PetscCall(PetscObjectGetComm((PetscObject)dmi, &comm)); 13769566063dSJacob Faibussowitsch PetscCall(DMSetUp(dmi)); 137747c6ae99SBarry Smith next = com->next; 13789566063dSJacob Faibussowitsch PetscCall(DMCompositeCreate(comm, fine)); 137947c6ae99SBarry Smith 138015229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 138147c6ae99SBarry Smith while (next) { 13829566063dSJacob Faibussowitsch PetscCall(DMRefine(next->dm, comm, &dm)); 13839566063dSJacob Faibussowitsch PetscCall(DMCompositeAddDM(*fine, dm)); 13849566063dSJacob Faibussowitsch PetscCall(PetscObjectDereference((PetscObject)dm)); 138547c6ae99SBarry Smith next = next->next; 138647c6ae99SBarry Smith } 13873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 138847c6ae99SBarry Smith } 138947c6ae99SBarry Smith 139066976f2fSJacob Faibussowitsch static PetscErrorCode DMCoarsen_Composite(DM dmi, MPI_Comm comm, DM *fine) 1391d71ae5a4SJacob Faibussowitsch { 139214354c39SJed Brown struct DMCompositeLink *next; 139314354c39SJed Brown DM_Composite *com = (DM_Composite *)dmi->data; 139414354c39SJed Brown DM dm; 139514354c39SJed Brown 139614354c39SJed Brown PetscFunctionBegin; 139714354c39SJed Brown PetscValidHeaderSpecific(dmi, DM_CLASSID, 1); 13989566063dSJacob Faibussowitsch PetscCall(DMSetUp(dmi)); 139948a46eb9SPierre Jolivet if (comm == MPI_COMM_NULL) PetscCall(PetscObjectGetComm((PetscObject)dmi, &comm)); 140014354c39SJed Brown next = com->next; 14019566063dSJacob Faibussowitsch PetscCall(DMCompositeCreate(comm, fine)); 140214354c39SJed Brown 140315229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 140414354c39SJed Brown while (next) { 14059566063dSJacob Faibussowitsch PetscCall(DMCoarsen(next->dm, comm, &dm)); 14069566063dSJacob Faibussowitsch PetscCall(DMCompositeAddDM(*fine, dm)); 14079566063dSJacob Faibussowitsch PetscCall(PetscObjectDereference((PetscObject)dm)); 140814354c39SJed Brown next = next->next; 140914354c39SJed Brown } 14103ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 141114354c39SJed Brown } 141247c6ae99SBarry Smith 141366976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateInterpolation_Composite(DM coarse, DM fine, Mat *A, Vec *v) 1414d71ae5a4SJacob Faibussowitsch { 14159ae5db72SJed Brown PetscInt m, n, M, N, nDM, i; 141647c6ae99SBarry Smith struct DMCompositeLink *nextc; 141747c6ae99SBarry Smith struct DMCompositeLink *nextf; 141825296bd5SBarry Smith Vec gcoarse, gfine, *vecs; 141947c6ae99SBarry Smith DM_Composite *comcoarse = (DM_Composite *)coarse->data; 142047c6ae99SBarry Smith DM_Composite *comfine = (DM_Composite *)fine->data; 14219ae5db72SJed Brown Mat *mats; 142247c6ae99SBarry Smith 142347c6ae99SBarry Smith PetscFunctionBegin; 142447c6ae99SBarry Smith PetscValidHeaderSpecific(coarse, DM_CLASSID, 1); 142547c6ae99SBarry Smith PetscValidHeaderSpecific(fine, DM_CLASSID, 2); 14269566063dSJacob Faibussowitsch PetscCall(DMSetUp(coarse)); 14279566063dSJacob Faibussowitsch PetscCall(DMSetUp(fine)); 142847c6ae99SBarry Smith /* use global vectors only for determining matrix layout */ 14299566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(coarse, &gcoarse)); 14309566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(fine, &gfine)); 14319566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(gcoarse, &n)); 14329566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(gfine, &m)); 14339566063dSJacob Faibussowitsch PetscCall(VecGetSize(gcoarse, &N)); 14349566063dSJacob Faibussowitsch PetscCall(VecGetSize(gfine, &M)); 14359566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(coarse, &gcoarse)); 14369566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(fine, &gfine)); 143747c6ae99SBarry Smith 14389ae5db72SJed Brown nDM = comfine->nDM; 143963a3b9bcSJacob Faibussowitsch PetscCheck(nDM == comcoarse->nDM, PetscObjectComm((PetscObject)fine), PETSC_ERR_ARG_INCOMP, "Fine DMComposite has %" PetscInt_FMT " entries, but coarse has %" PetscInt_FMT, nDM, comcoarse->nDM); 14409566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(nDM * nDM, &mats)); 144148a46eb9SPierre Jolivet if (v) PetscCall(PetscCalloc1(nDM, &vecs)); 144247c6ae99SBarry Smith 144315229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 14449ae5db72SJed Brown for (nextc = comcoarse->next, nextf = comfine->next, i = 0; nextc; nextc = nextc->next, nextf = nextf->next, i++) { 14451baa6e33SBarry Smith if (!v) PetscCall(DMCreateInterpolation(nextc->dm, nextf->dm, &mats[i * nDM + i], NULL)); 14461baa6e33SBarry Smith else PetscCall(DMCreateInterpolation(nextc->dm, nextf->dm, &mats[i * nDM + i], &vecs[i])); 144747c6ae99SBarry Smith } 14489566063dSJacob Faibussowitsch PetscCall(MatCreateNest(PetscObjectComm((PetscObject)fine), nDM, NULL, nDM, NULL, mats, A)); 14491baa6e33SBarry Smith if (v) PetscCall(VecCreateNest(PetscObjectComm((PetscObject)fine), nDM, NULL, vecs, v)); 14509566063dSJacob Faibussowitsch for (i = 0; i < nDM * nDM; i++) PetscCall(MatDestroy(&mats[i])); 14519566063dSJacob Faibussowitsch PetscCall(PetscFree(mats)); 145225296bd5SBarry Smith if (v) { 14539566063dSJacob Faibussowitsch for (i = 0; i < nDM; i++) PetscCall(VecDestroy(&vecs[i])); 14549566063dSJacob Faibussowitsch PetscCall(PetscFree(vecs)); 145525296bd5SBarry Smith } 14563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 145747c6ae99SBarry Smith } 145847c6ae99SBarry Smith 1459d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMGetLocalToGlobalMapping_Composite(DM dm) 1460d71ae5a4SJacob Faibussowitsch { 14611411c6eeSJed Brown DM_Composite *com = (DM_Composite *)dm->data; 14621411c6eeSJed Brown ISLocalToGlobalMapping *ltogs; 1463f7efa3c7SJed Brown PetscInt i; 14641411c6eeSJed Brown 14651411c6eeSJed Brown PetscFunctionBegin; 14661411c6eeSJed Brown /* Set the ISLocalToGlobalMapping on the new matrix */ 14679566063dSJacob Faibussowitsch PetscCall(DMCompositeGetISLocalToGlobalMappings(dm, <ogs)); 14689566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingConcatenate(PetscObjectComm((PetscObject)dm), com->nDM, ltogs, &dm->ltogmap)); 14699566063dSJacob Faibussowitsch for (i = 0; i < com->nDM; i++) PetscCall(ISLocalToGlobalMappingDestroy(<ogs[i])); 14709566063dSJacob Faibussowitsch PetscCall(PetscFree(ltogs)); 14713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14721411c6eeSJed Brown } 14731411c6eeSJed Brown 147466976f2fSJacob Faibussowitsch static PetscErrorCode DMCreateColoring_Composite(DM dm, ISColoringType ctype, ISColoring *coloring) 1475d71ae5a4SJacob Faibussowitsch { 147647c6ae99SBarry Smith PetscInt n, i, cnt; 147747c6ae99SBarry Smith ISColoringValue *colors; 147847c6ae99SBarry Smith PetscBool dense = PETSC_FALSE; 147947c6ae99SBarry Smith ISColoringValue maxcol = 0; 148047c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 148147c6ae99SBarry Smith 148247c6ae99SBarry Smith PetscFunctionBegin; 148347c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 148408401ef6SPierre Jolivet PetscCheck(ctype != IS_COLORING_LOCAL, PetscObjectComm((PetscObject)dm), PETSC_ERR_SUP, "Only global coloring supported"); 1485f7d195e4SLawrence Mitchell if (ctype == IS_COLORING_GLOBAL) { 148647c6ae99SBarry Smith n = com->n; 1487ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Unknown ISColoringType"); 14889566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &colors)); /* freed in ISColoringDestroy() */ 148947c6ae99SBarry Smith 14909566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(((PetscObject)dm)->options, ((PetscObject)dm)->prefix, "-dmcomposite_dense_jacobian", &dense, NULL)); 149147c6ae99SBarry Smith if (dense) { 1492ad540459SPierre Jolivet for (i = 0; i < n; i++) colors[i] = (ISColoringValue)(com->rstart + i); 149347c6ae99SBarry Smith maxcol = com->N; 149447c6ae99SBarry Smith } else { 149547c6ae99SBarry Smith struct DMCompositeLink *next = com->next; 149647c6ae99SBarry Smith PetscMPIInt rank; 149747c6ae99SBarry Smith 14989566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)dm), &rank)); 149947c6ae99SBarry Smith cnt = 0; 150047c6ae99SBarry Smith while (next) { 150147c6ae99SBarry Smith ISColoring lcoloring; 150247c6ae99SBarry Smith 15039566063dSJacob Faibussowitsch PetscCall(DMCreateColoring(next->dm, IS_COLORING_GLOBAL, &lcoloring)); 1504ad540459SPierre Jolivet for (i = 0; i < lcoloring->N; i++) colors[cnt++] = maxcol + lcoloring->colors[i]; 150547c6ae99SBarry Smith maxcol += lcoloring->n; 15069566063dSJacob Faibussowitsch PetscCall(ISColoringDestroy(&lcoloring)); 150747c6ae99SBarry Smith next = next->next; 150847c6ae99SBarry Smith } 150947c6ae99SBarry Smith } 15109566063dSJacob Faibussowitsch PetscCall(ISColoringCreate(PetscObjectComm((PetscObject)dm), maxcol, n, colors, PETSC_OWN_POINTER, coloring)); 15113ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 151247c6ae99SBarry Smith } 151347c6ae99SBarry Smith 151466976f2fSJacob Faibussowitsch static PetscErrorCode DMGlobalToLocalBegin_Composite(DM dm, Vec gvec, InsertMode mode, Vec lvec) 1515d71ae5a4SJacob Faibussowitsch { 151647c6ae99SBarry Smith struct DMCompositeLink *next; 151747c6ae99SBarry Smith PetscScalar *garray, *larray; 151847c6ae99SBarry Smith DM_Composite *com = (DM_Composite *)dm->data; 151947c6ae99SBarry Smith 152047c6ae99SBarry Smith PetscFunctionBegin; 152147c6ae99SBarry Smith PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 152247c6ae99SBarry Smith PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 152339d35262SVincent Le Chenadec 152448a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 152539d35262SVincent Le Chenadec 15269566063dSJacob Faibussowitsch PetscCall(VecGetArray(gvec, &garray)); 15279566063dSJacob Faibussowitsch PetscCall(VecGetArray(lvec, &larray)); 152847c6ae99SBarry Smith 152915229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 153039d35262SVincent Le Chenadec next = com->next; 153147c6ae99SBarry Smith while (next) { 153247c6ae99SBarry Smith Vec local, global; 153347c6ae99SBarry Smith PetscInt N; 153447c6ae99SBarry Smith 15359566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 15369566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(global, &N)); 15379566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, garray)); 15389566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(next->dm, &local)); 15399566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(local, larray)); 15409566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(next->dm, global, mode, local)); 15419566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(next->dm, global, mode, local)); 15429566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 15439566063dSJacob Faibussowitsch PetscCall(VecResetArray(local)); 15449566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 15459566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(next->dm, &local)); 154639d35262SVincent Le Chenadec 154706ebdd98SJed Brown larray += next->nlocal; 154839d35262SVincent Le Chenadec garray += next->n; 154947c6ae99SBarry Smith next = next->next; 155047c6ae99SBarry Smith } 155147c6ae99SBarry Smith 15529566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(gvec, NULL)); 15539566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(lvec, NULL)); 15543ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 155547c6ae99SBarry Smith } 155647c6ae99SBarry Smith 155766976f2fSJacob Faibussowitsch static PetscErrorCode DMGlobalToLocalEnd_Composite(DM dm, Vec gvec, InsertMode mode, Vec lvec) 1558d71ae5a4SJacob Faibussowitsch { 15590c010503SBarry Smith PetscFunctionBegin; 156039d35262SVincent Le Chenadec PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 156139d35262SVincent Le Chenadec PetscValidHeaderSpecific(gvec, VEC_CLASSID, 2); 156239d35262SVincent Le Chenadec PetscValidHeaderSpecific(lvec, VEC_CLASSID, 4); 15633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 156439d35262SVincent Le Chenadec } 156539d35262SVincent Le Chenadec 156666976f2fSJacob Faibussowitsch static PetscErrorCode DMLocalToGlobalBegin_Composite(DM dm, Vec lvec, InsertMode mode, Vec gvec) 1567d71ae5a4SJacob Faibussowitsch { 156839d35262SVincent Le Chenadec struct DMCompositeLink *next; 156939d35262SVincent Le Chenadec PetscScalar *larray, *garray; 157039d35262SVincent Le Chenadec DM_Composite *com = (DM_Composite *)dm->data; 157139d35262SVincent Le Chenadec 157239d35262SVincent Le Chenadec PetscFunctionBegin; 157339d35262SVincent Le Chenadec PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 157439d35262SVincent Le Chenadec PetscValidHeaderSpecific(lvec, VEC_CLASSID, 2); 157539d35262SVincent Le Chenadec PetscValidHeaderSpecific(gvec, VEC_CLASSID, 4); 157639d35262SVincent Le Chenadec 157748a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 157839d35262SVincent Le Chenadec 15799566063dSJacob Faibussowitsch PetscCall(VecGetArray(lvec, &larray)); 15809566063dSJacob Faibussowitsch PetscCall(VecGetArray(gvec, &garray)); 158139d35262SVincent Le Chenadec 158215229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 158339d35262SVincent Le Chenadec next = com->next; 158439d35262SVincent Le Chenadec while (next) { 158539d35262SVincent Le Chenadec Vec global, local; 158639d35262SVincent Le Chenadec 15879566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(next->dm, &local)); 15889566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(local, larray)); 15899566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(next->dm, &global)); 15909566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(global, garray)); 15919566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalBegin(next->dm, local, mode, global)); 15929566063dSJacob Faibussowitsch PetscCall(DMLocalToGlobalEnd(next->dm, local, mode, global)); 15939566063dSJacob Faibussowitsch PetscCall(VecResetArray(local)); 15949566063dSJacob Faibussowitsch PetscCall(VecResetArray(global)); 15959566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(next->dm, &global)); 15969566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(next->dm, &local)); 159739d35262SVincent Le Chenadec 159839d35262SVincent Le Chenadec garray += next->n; 159939d35262SVincent Le Chenadec larray += next->nlocal; 160039d35262SVincent Le Chenadec next = next->next; 160139d35262SVincent Le Chenadec } 160239d35262SVincent Le Chenadec 16039566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(gvec, NULL)); 16049566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(lvec, NULL)); 16053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 160639d35262SVincent Le Chenadec } 160739d35262SVincent Le Chenadec 160866976f2fSJacob Faibussowitsch static PetscErrorCode DMLocalToGlobalEnd_Composite(DM dm, Vec lvec, InsertMode mode, Vec gvec) 1609d71ae5a4SJacob Faibussowitsch { 161039d35262SVincent Le Chenadec PetscFunctionBegin; 161139d35262SVincent Le Chenadec PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 161239d35262SVincent Le Chenadec PetscValidHeaderSpecific(lvec, VEC_CLASSID, 2); 161339d35262SVincent Le Chenadec PetscValidHeaderSpecific(gvec, VEC_CLASSID, 4); 16143ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 161539d35262SVincent Le Chenadec } 161639d35262SVincent Le Chenadec 161766976f2fSJacob Faibussowitsch static PetscErrorCode DMLocalToLocalBegin_Composite(DM dm, Vec vec1, InsertMode mode, Vec vec2) 1618d71ae5a4SJacob Faibussowitsch { 161939d35262SVincent Le Chenadec struct DMCompositeLink *next; 162039d35262SVincent Le Chenadec PetscScalar *array1, *array2; 162139d35262SVincent Le Chenadec DM_Composite *com = (DM_Composite *)dm->data; 162239d35262SVincent Le Chenadec 162339d35262SVincent Le Chenadec PetscFunctionBegin; 162439d35262SVincent Le Chenadec PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 162539d35262SVincent Le Chenadec PetscValidHeaderSpecific(vec1, VEC_CLASSID, 2); 162639d35262SVincent Le Chenadec PetscValidHeaderSpecific(vec2, VEC_CLASSID, 4); 162739d35262SVincent Le Chenadec 162848a46eb9SPierre Jolivet if (!com->setup) PetscCall(DMSetUp(dm)); 162939d35262SVincent Le Chenadec 16309566063dSJacob Faibussowitsch PetscCall(VecGetArray(vec1, &array1)); 16319566063dSJacob Faibussowitsch PetscCall(VecGetArray(vec2, &array2)); 163239d35262SVincent Le Chenadec 163315229ffcSPierre Jolivet /* loop over packed objects, handling one at a time */ 163439d35262SVincent Le Chenadec next = com->next; 163539d35262SVincent Le Chenadec while (next) { 163639d35262SVincent Le Chenadec Vec local1, local2; 163739d35262SVincent Le Chenadec 16389566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(next->dm, &local1)); 16399566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(local1, array1)); 16409566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(next->dm, &local2)); 16419566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(local2, array2)); 16429566063dSJacob Faibussowitsch PetscCall(DMLocalToLocalBegin(next->dm, local1, mode, local2)); 16439566063dSJacob Faibussowitsch PetscCall(DMLocalToLocalEnd(next->dm, local1, mode, local2)); 16449566063dSJacob Faibussowitsch PetscCall(VecResetArray(local2)); 16459566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(next->dm, &local2)); 16469566063dSJacob Faibussowitsch PetscCall(VecResetArray(local1)); 16479566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(next->dm, &local1)); 164839d35262SVincent Le Chenadec 164939d35262SVincent Le Chenadec array1 += next->nlocal; 165039d35262SVincent Le Chenadec array2 += next->nlocal; 165139d35262SVincent Le Chenadec next = next->next; 165239d35262SVincent Le Chenadec } 165339d35262SVincent Le Chenadec 16549566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(vec1, NULL)); 16559566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(vec2, NULL)); 16563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 165739d35262SVincent Le Chenadec } 165839d35262SVincent Le Chenadec 165966976f2fSJacob Faibussowitsch static PetscErrorCode DMLocalToLocalEnd_Composite(DM dm, Vec lvec, InsertMode mode, Vec gvec) 1660d71ae5a4SJacob Faibussowitsch { 166139d35262SVincent Le Chenadec PetscFunctionBegin; 166239d35262SVincent Le Chenadec PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 166339d35262SVincent Le Chenadec PetscValidHeaderSpecific(lvec, VEC_CLASSID, 2); 166439d35262SVincent Le Chenadec PetscValidHeaderSpecific(gvec, VEC_CLASSID, 4); 16653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16660c010503SBarry Smith } 166747c6ae99SBarry Smith 16686ae3a549SBarry Smith /*MC 1669dce8aebaSBarry Smith DMCOMPOSITE = "composite" - A `DM` object that is used to manage data for a collection of `DM` 16706ae3a549SBarry Smith 16716ae3a549SBarry Smith Level: intermediate 16726ae3a549SBarry Smith 1673db781477SPatrick Sanan .seealso: `DMType`, `DM`, `DMDACreate()`, `DMCreate()`, `DMSetType()`, `DMCompositeCreate()` 16746ae3a549SBarry Smith M*/ 16756ae3a549SBarry Smith 1676d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode DMCreate_Composite(DM p) 1677d71ae5a4SJacob Faibussowitsch { 1678a4121054SBarry Smith DM_Composite *com; 1679a4121054SBarry Smith 1680a4121054SBarry Smith PetscFunctionBegin; 16814dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&com)); 1682a4121054SBarry Smith p->data = com; 1683a4121054SBarry Smith com->n = 0; 16847ac2b803SAlex Fikl com->nghost = 0; 16850298fd71SBarry Smith com->next = NULL; 1686a4121054SBarry Smith com->nDM = 0; 1687a4121054SBarry Smith 1688a4121054SBarry Smith p->ops->createglobalvector = DMCreateGlobalVector_Composite; 1689a4121054SBarry Smith p->ops->createlocalvector = DMCreateLocalVector_Composite; 1690184d77edSJed Brown p->ops->getlocaltoglobalmapping = DMGetLocalToGlobalMapping_Composite; 16914d343eeaSMatthew G Knepley p->ops->createfieldis = DMCreateFieldIS_Composite; 169216621825SDmitry Karpeev p->ops->createfielddecomposition = DMCreateFieldDecomposition_Composite; 1693a4121054SBarry Smith p->ops->refine = DMRefine_Composite; 169414354c39SJed Brown p->ops->coarsen = DMCoarsen_Composite; 169525296bd5SBarry Smith p->ops->createinterpolation = DMCreateInterpolation_Composite; 169625296bd5SBarry Smith p->ops->creatematrix = DMCreateMatrix_Composite; 1697e727c939SJed Brown p->ops->getcoloring = DMCreateColoring_Composite; 1698a4121054SBarry Smith p->ops->globaltolocalbegin = DMGlobalToLocalBegin_Composite; 1699a4121054SBarry Smith p->ops->globaltolocalend = DMGlobalToLocalEnd_Composite; 170039d35262SVincent Le Chenadec p->ops->localtoglobalbegin = DMLocalToGlobalBegin_Composite; 170139d35262SVincent Le Chenadec p->ops->localtoglobalend = DMLocalToGlobalEnd_Composite; 170239d35262SVincent Le Chenadec p->ops->localtolocalbegin = DMLocalToLocalBegin_Composite; 170339d35262SVincent Le Chenadec p->ops->localtolocalend = DMLocalToLocalEnd_Composite; 1704a4121054SBarry Smith p->ops->destroy = DMDestroy_Composite; 1705a4121054SBarry Smith p->ops->view = DMView_Composite; 1706a4121054SBarry Smith p->ops->setup = DMSetUp_Composite; 1707e10fd815SStefano Zampini 17089566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)p, "DMSetUpGLVisViewer_C", DMSetUpGLVisViewer_Composite)); 17093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1710a4121054SBarry Smith } 1711a4121054SBarry Smith 17121fd49c25SBarry Smith /*@ 1713dce8aebaSBarry Smith DMCompositeCreate - Creates a `DMCOMPOSITE`, used to generate "composite" 17140c010503SBarry Smith vectors made up of several subvectors. 17150c010503SBarry Smith 1716d083f849SBarry Smith Collective 171747c6ae99SBarry Smith 171847c6ae99SBarry Smith Input Parameter: 17190c010503SBarry Smith . comm - the processors that will share the global vector 17200c010503SBarry Smith 17212fe279fdSBarry Smith Output Parameter: 1722dce8aebaSBarry Smith . packer - the `DMCOMPOSITE` object 172347c6ae99SBarry Smith 172447c6ae99SBarry Smith Level: advanced 172547c6ae99SBarry Smith 172660225df5SJacob Faibussowitsch .seealso: `DMCOMPOSITE`, `DM`, `DMDestroy()`, `DMCompositeAddDM()`, `DMCompositeScatter()`, `DMCreate()` 1727db781477SPatrick Sanan `DMCompositeGather()`, `DMCreateGlobalVector()`, `DMCompositeGetISLocalToGlobalMappings()`, `DMCompositeGetAccess()` 1728db781477SPatrick Sanan `DMCompositeGetLocalVectors()`, `DMCompositeRestoreLocalVectors()`, `DMCompositeGetEntries()` 172947c6ae99SBarry Smith @*/ 1730d71ae5a4SJacob Faibussowitsch PetscErrorCode DMCompositeCreate(MPI_Comm comm, DM *packer) 1731d71ae5a4SJacob Faibussowitsch { 173247c6ae99SBarry Smith PetscFunctionBegin; 17334f572ea9SToby Isaac PetscAssertPointer(packer, 2); 17349566063dSJacob Faibussowitsch PetscCall(DMCreate(comm, packer)); 17359566063dSJacob Faibussowitsch PetscCall(DMSetType(*packer, DMCOMPOSITE)); 17363ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 173747c6ae99SBarry Smith } 1738