147c6ae99SBarry Smith /*
247c6ae99SBarry Smith Code for manipulating distributed regular arrays in parallel.
347c6ae99SBarry Smith */
447c6ae99SBarry Smith
5af0996ceSBarry Smith #include <petsc/private/dmdaimpl.h> /*I "petscdmda.h" I*/
647c6ae99SBarry Smith
7d1e78c4fSBarry Smith #if defined(PETSC_HAVE_MATLAB)
8c6db04a5SJed Brown #include <mat.h> /* MATLAB include file */
947c6ae99SBarry Smith
DMView_DA_Matlab(DM da,PetscViewer viewer)10d71ae5a4SJacob Faibussowitsch PetscErrorCode DMView_DA_Matlab(DM da, PetscViewer viewer)
11d71ae5a4SJacob Faibussowitsch {
1247c6ae99SBarry Smith PetscMPIInt rank;
1347c6ae99SBarry Smith PetscInt dim, m, n, p, dof, swidth;
14aa219208SBarry Smith DMDAStencilType stencil;
15bff4a2f0SMatthew G. Knepley DMBoundaryType bx, by, bz;
1647c6ae99SBarry Smith mxArray *mx;
171321219cSEthan Coon const char *fnames[] = {"dimension", "m", "n", "p", "dof", "stencil_width", "bx", "by", "bz", "stencil_type"};
1847c6ae99SBarry Smith
1947c6ae99SBarry Smith PetscFunctionBegin;
209566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)da), &rank));
21dd400576SPatrick Sanan if (rank == 0) {
229566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(da, &dim, &m, &n, &p, 0, 0, 0, &dof, &swidth, &bx, &by, &bz, &stencil));
2347c6ae99SBarry Smith mx = mxCreateStructMatrix(1, 1, 8, (const char **)fnames);
247a8be351SBarry Smith PetscCheck(mx, PETSC_COMM_SELF, PETSC_ERR_LIB, "Unable to generate MATLAB struct array to hold DMDA information");
2547c6ae99SBarry Smith mxSetFieldByNumber(mx, 0, 0, mxCreateDoubleScalar((double)dim));
2647c6ae99SBarry Smith mxSetFieldByNumber(mx, 0, 1, mxCreateDoubleScalar((double)m));
2747c6ae99SBarry Smith mxSetFieldByNumber(mx, 0, 2, mxCreateDoubleScalar((double)n));
2847c6ae99SBarry Smith mxSetFieldByNumber(mx, 0, 3, mxCreateDoubleScalar((double)p));
2947c6ae99SBarry Smith mxSetFieldByNumber(mx, 0, 4, mxCreateDoubleScalar((double)dof));
3047c6ae99SBarry Smith mxSetFieldByNumber(mx, 0, 5, mxCreateDoubleScalar((double)swidth));
311321219cSEthan Coon mxSetFieldByNumber(mx, 0, 6, mxCreateDoubleScalar((double)bx));
321321219cSEthan Coon mxSetFieldByNumber(mx, 0, 7, mxCreateDoubleScalar((double)by));
331321219cSEthan Coon mxSetFieldByNumber(mx, 0, 8, mxCreateDoubleScalar((double)bz));
341321219cSEthan Coon mxSetFieldByNumber(mx, 0, 9, mxCreateDoubleScalar((double)stencil));
359566063dSJacob Faibussowitsch PetscCall(PetscObjectName((PetscObject)da));
369566063dSJacob Faibussowitsch PetscCall(PetscViewerMatlabPutVariable(viewer, ((PetscObject)da)->name, mx));
3747c6ae99SBarry Smith }
383ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
3947c6ae99SBarry Smith }
4047c6ae99SBarry Smith #endif
4147c6ae99SBarry Smith
DMView_DA_Binary(DM da,PetscViewer viewer)42d71ae5a4SJacob Faibussowitsch PetscErrorCode DMView_DA_Binary(DM da, PetscViewer viewer)
43d71ae5a4SJacob Faibussowitsch {
4447c6ae99SBarry Smith PetscMPIInt rank;
45b859378eSBarry Smith PetscInt dim, m, n, p, dof, swidth, M, N, P;
46aa219208SBarry Smith DMDAStencilType stencil;
47bff4a2f0SMatthew G. Knepley DMBoundaryType bx, by, bz;
4847c6ae99SBarry Smith MPI_Comm comm;
49bc2bf880SBarry Smith PetscBool coors = PETSC_FALSE;
506858538eSMatthew G. Knepley Vec coordinates;
5147c6ae99SBarry Smith
5247c6ae99SBarry Smith PetscFunctionBegin;
539566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)da, &comm));
5447c6ae99SBarry Smith
559566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(da, &dim, &m, &n, &p, &M, &N, &P, &dof, &swidth, &bx, &by, &bz, &stencil));
569566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank));
576858538eSMatthew G. Knepley PetscCall(DMGetCoordinates(da, &coordinates));
58dd400576SPatrick Sanan if (rank == 0) {
599566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(viewer, &dim, 1, PETSC_INT));
609566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(viewer, &m, 1, PETSC_INT));
619566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(viewer, &n, 1, PETSC_INT));
629566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(viewer, &p, 1, PETSC_INT));
639566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(viewer, &dof, 1, PETSC_INT));
649566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(viewer, &swidth, 1, PETSC_INT));
659566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(viewer, &bx, 1, PETSC_ENUM));
669566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(viewer, &by, 1, PETSC_ENUM));
679566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(viewer, &bz, 1, PETSC_ENUM));
689566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(viewer, &stencil, 1, PETSC_ENUM));
696858538eSMatthew G. Knepley if (coordinates) coors = PETSC_TRUE;
709566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(viewer, &coors, 1, PETSC_BOOL));
7147c6ae99SBarry Smith }
7247c6ae99SBarry Smith
7347c6ae99SBarry Smith /* save the coordinates if they exist to disk (in the natural ordering) */
746858538eSMatthew G. Knepley if (coordinates) PetscCall(VecView(coordinates, viewer));
753ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
7647c6ae99SBarry Smith }
7747c6ae99SBarry Smith
785d83a8b1SBarry Smith /*@
79aa219208SBarry Smith DMDAGetInfo - Gets information about a given distributed array.
8047c6ae99SBarry Smith
8147c6ae99SBarry Smith Not Collective
8247c6ae99SBarry Smith
8347c6ae99SBarry Smith Input Parameter:
8472fd0fbdSBarry Smith . da - the `DMDA`
8547c6ae99SBarry Smith
8647c6ae99SBarry Smith Output Parameters:
8772fd0fbdSBarry Smith + dim - dimension of the `DMDA` (1, 2, or 3)
886b867d5aSJose E. Roman . M - global dimension in first direction of the array
896b867d5aSJose E. Roman . N - global dimension in second direction of the array
906b867d5aSJose E. Roman . P - global dimension in third direction of the array
9172fd0fbdSBarry Smith . m - corresponding number of MPI processes in first dimension
9272fd0fbdSBarry Smith . n - corresponding number of MPI processes in second dimension
9372fd0fbdSBarry Smith . p - corresponding number of MPI processes in third dimension
9447c6ae99SBarry Smith . dof - number of degrees of freedom per node
9547c6ae99SBarry Smith . s - stencil width
966b867d5aSJose E. Roman . bx - type of ghost nodes at boundary in first dimension
976b867d5aSJose E. Roman . by - type of ghost nodes at boundary in second dimension
986b867d5aSJose E. Roman . bz - type of ghost nodes at boundary in third dimension
99dce8aebaSBarry Smith - st - stencil type, either `DMDA_STENCIL_STAR` or `DMDA_STENCIL_BOX`
10047c6ae99SBarry Smith
10147c6ae99SBarry Smith Level: beginner
10247c6ae99SBarry Smith
10347c6ae99SBarry Smith Note:
10412b4a537SBarry Smith Use `NULL` (`PETSC_NULL_INTEGER` in Fortran) in place of any output parameter that is not of interest.
10547c6ae99SBarry Smith
10612b4a537SBarry Smith .seealso: [](sec_struct), `DM`, `DMDA`, `DMView()`, `DMDAGetCorners()`, `DMDAGetLocalInfo()`
10747c6ae99SBarry Smith @*/
DMDAGetInfo(DM da,PeOp PetscInt * dim,PeOp PetscInt * M,PeOp PetscInt * N,PeOp PetscInt * P,PeOp PetscInt * m,PeOp PetscInt * n,PeOp PetscInt * p,PeOp PetscInt * dof,PeOp PetscInt * s,PeOp DMBoundaryType * bx,PeOp DMBoundaryType * by,PeOp DMBoundaryType * bz,PeOp DMDAStencilType * st)108*ce78bad3SBarry Smith PetscErrorCode DMDAGetInfo(DM da, PeOp PetscInt *dim, PeOp PetscInt *M, PeOp PetscInt *N, PeOp PetscInt *P, PeOp PetscInt *m, PeOp PetscInt *n, PeOp PetscInt *p, PeOp PetscInt *dof, PeOp PetscInt *s, PeOp DMBoundaryType *bx, PeOp DMBoundaryType *by, PeOp DMBoundaryType *bz, PeOp DMDAStencilType *st)
109d71ae5a4SJacob Faibussowitsch {
11047c6ae99SBarry Smith DM_DA *dd = (DM_DA *)da->data;
11147c6ae99SBarry Smith
11247c6ae99SBarry Smith PetscFunctionBegin;
113a9a02de4SBarry Smith PetscValidHeaderSpecificType(da, DM_CLASSID, 1, DMDA);
114c73cfb54SMatthew G. Knepley if (dim) *dim = da->dim;
115e30e807fSPeter Brune if (M) {
1168865f1eaSKarl Rupp if (dd->Mo < 0) *M = dd->M;
1178865f1eaSKarl Rupp else *M = dd->Mo;
118e30e807fSPeter Brune }
119e30e807fSPeter Brune if (N) {
1208865f1eaSKarl Rupp if (dd->No < 0) *N = dd->N;
1218865f1eaSKarl Rupp else *N = dd->No;
122e30e807fSPeter Brune }
123e30e807fSPeter Brune if (P) {
1248865f1eaSKarl Rupp if (dd->Po < 0) *P = dd->P;
1258865f1eaSKarl Rupp else *P = dd->Po;
126e30e807fSPeter Brune }
12747c6ae99SBarry Smith if (m) *m = dd->m;
12847c6ae99SBarry Smith if (n) *n = dd->n;
12947c6ae99SBarry Smith if (p) *p = dd->p;
13047c6ae99SBarry Smith if (dof) *dof = dd->w;
13147c6ae99SBarry Smith if (s) *s = dd->s;
1321321219cSEthan Coon if (bx) *bx = dd->bx;
1331321219cSEthan Coon if (by) *by = dd->by;
1341321219cSEthan Coon if (bz) *bz = dd->bz;
13547c6ae99SBarry Smith if (st) *st = dd->stencil_type;
1363ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
13747c6ae99SBarry Smith }
13847c6ae99SBarry Smith
139*ce78bad3SBarry Smith /*@C
14072fd0fbdSBarry Smith DMDAGetLocalInfo - Gets information about a given `DMDA` and this MPI process's location in it
14147c6ae99SBarry Smith
14247c6ae99SBarry Smith Not Collective
14347c6ae99SBarry Smith
14447c6ae99SBarry Smith Input Parameter:
14572fd0fbdSBarry Smith . da - the `DMDA`
14647c6ae99SBarry Smith
147*ce78bad3SBarry Smith Output Parameter:
14860225df5SJacob Faibussowitsch . info - structure containing the information
14947c6ae99SBarry Smith
15047c6ae99SBarry Smith Level: beginner
15147c6ae99SBarry Smith
152dce8aebaSBarry Smith Note:
153dce8aebaSBarry Smith See `DMDALocalInfo` for the information that is returned
154d3187782SBarry Smith
15512b4a537SBarry Smith .seealso: [](sec_struct), `DM`, `DMDA`, `DMDAGetInfo()`, `DMDAGetCorners()`, `DMDALocalInfo`
15647c6ae99SBarry Smith @*/
DMDAGetLocalInfo(DM da,DMDALocalInfo * info)157d71ae5a4SJacob Faibussowitsch PetscErrorCode DMDAGetLocalInfo(DM da, DMDALocalInfo *info)
158d71ae5a4SJacob Faibussowitsch {
15947c6ae99SBarry Smith PetscInt w;
16047c6ae99SBarry Smith DM_DA *dd = (DM_DA *)da->data;
16147c6ae99SBarry Smith
16247c6ae99SBarry Smith PetscFunctionBegin;
163a9a02de4SBarry Smith PetscValidHeaderSpecificType(da, DM_CLASSID, 1, DMDA);
1644f572ea9SToby Isaac PetscAssertPointer(info, 2);
16547c6ae99SBarry Smith info->da = da;
166c73cfb54SMatthew G. Knepley info->dim = da->dim;
1678865f1eaSKarl Rupp if (dd->Mo < 0) info->mx = dd->M;
1688865f1eaSKarl Rupp else info->mx = dd->Mo;
1698865f1eaSKarl Rupp if (dd->No < 0) info->my = dd->N;
1708865f1eaSKarl Rupp else info->my = dd->No;
1718865f1eaSKarl Rupp if (dd->Po < 0) info->mz = dd->P;
1728865f1eaSKarl Rupp else info->mz = dd->Po;
17347c6ae99SBarry Smith info->dof = dd->w;
17447c6ae99SBarry Smith info->sw = dd->s;
1751321219cSEthan Coon info->bx = dd->bx;
1761321219cSEthan Coon info->by = dd->by;
1771321219cSEthan Coon info->bz = dd->bz;
17847c6ae99SBarry Smith info->st = dd->stencil_type;
17947c6ae99SBarry Smith
18047c6ae99SBarry Smith /* since the xs, xe ... have all been multiplied by the number of degrees
18147c6ae99SBarry Smith of freedom per cell, w = dd->w, we divide that out before returning.*/
18247c6ae99SBarry Smith w = dd->w;
183d886c4f4SPeter Brune info->xs = dd->xs / w + dd->xo;
18447c6ae99SBarry Smith info->xm = (dd->xe - dd->xs) / w;
18547c6ae99SBarry Smith /* the y and z have NOT been multiplied by w */
186d886c4f4SPeter Brune info->ys = dd->ys + dd->yo;
18747c6ae99SBarry Smith info->ym = (dd->ye - dd->ys);
188d886c4f4SPeter Brune info->zs = dd->zs + dd->zo;
18947c6ae99SBarry Smith info->zm = (dd->ze - dd->zs);
19047c6ae99SBarry Smith
191d886c4f4SPeter Brune info->gxs = dd->Xs / w + dd->xo;
19247c6ae99SBarry Smith info->gxm = (dd->Xe - dd->Xs) / w;
19347c6ae99SBarry Smith /* the y and z have NOT been multiplied by w */
194d886c4f4SPeter Brune info->gys = dd->Ys + dd->yo;
19547c6ae99SBarry Smith info->gym = (dd->Ye - dd->Ys);
196d886c4f4SPeter Brune info->gzs = dd->Zs + dd->zo;
19747c6ae99SBarry Smith info->gzm = (dd->Ze - dd->Zs);
1983ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS);
19947c6ae99SBarry Smith }
200