147c6ae99SBarry Smith 247c6ae99SBarry Smith /* 3aa219208SBarry Smith Plots vectors obtained with DMDACreate1d() 447c6ae99SBarry Smith */ 547c6ae99SBarry Smith 6c6db04a5SJed Brown #include <petscdmda.h> /*I "petscdmda.h" I*/ 747c6ae99SBarry Smith 847c6ae99SBarry Smith #undef __FUNCT__ 9aa219208SBarry Smith #define __FUNCT__ "DMDASetUniformCoordinates" 1047c6ae99SBarry Smith /*@ 11aa219208SBarry Smith DMDASetUniformCoordinates - Sets a DMDA coordinates to be a uniform grid 1247c6ae99SBarry Smith 13aa219208SBarry Smith Collective on DMDA 1447c6ae99SBarry Smith 1547c6ae99SBarry Smith Input Parameters: 1647c6ae99SBarry Smith + da - the distributed array object 1747c6ae99SBarry Smith . xmin,xmax - extremes in the x direction 1847c6ae99SBarry Smith . ymin,ymax - extremes in the y direction (use PETSC_NULL for 1 dimensional problems) 1947c6ae99SBarry Smith - zmin,zmax - extremes in the z direction (use PETSC_NULL for 1 or 2 dimensional problems) 2047c6ae99SBarry Smith 2147c6ae99SBarry Smith Level: beginner 2247c6ae99SBarry Smith 23aa219208SBarry Smith .seealso: DMDASetCoordinates(), DMDAGetCoordinates(), DMDACreate1d(), DMDACreate2d(), DMDACreate3d() 2447c6ae99SBarry Smith 2547c6ae99SBarry Smith @*/ 267087cfbeSBarry Smith PetscErrorCode DMDASetUniformCoordinates(DM da,PetscReal xmin,PetscReal xmax,PetscReal ymin,PetscReal ymax,PetscReal zmin,PetscReal zmax) 2747c6ae99SBarry Smith { 2847c6ae99SBarry Smith MPI_Comm comm; 299a42bb27SBarry Smith DM cda; 301321219cSEthan Coon DMDABoundaryType bx,by,bz; 3147c6ae99SBarry Smith Vec xcoor; 3247c6ae99SBarry Smith PetscScalar *coors; 3347c6ae99SBarry Smith PetscReal hx,hy,hz_; 3447c6ae99SBarry Smith PetscInt i,j,k,M,N,P,istart,isize,jstart,jsize,kstart,ksize,dim,cnt; 3547c6ae99SBarry Smith PetscErrorCode ierr; 3647c6ae99SBarry Smith 3747c6ae99SBarry Smith PetscFunctionBegin; 3847c6ae99SBarry Smith if (xmax <= xmin) SETERRQ2(((PetscObject)da)->comm,PETSC_ERR_ARG_INCOMP,"xmax must be larger than xmin %G %G",xmin,xmax); 3947c6ae99SBarry Smith 4047c6ae99SBarry Smith ierr = PetscObjectGetComm((PetscObject)da,&comm);CHKERRQ(ierr); 411321219cSEthan Coon ierr = DMDAGetInfo(da,&dim,&M,&N,&P,0,0,0,0,0,&bx,&by,&bz,0);CHKERRQ(ierr); 42aa219208SBarry Smith ierr = DMDAGetCorners(da,&istart,&jstart,&kstart,&isize,&jsize,&ksize);CHKERRQ(ierr); 43aa219208SBarry Smith ierr = DMDAGetCoordinateDA(da, &cda);CHKERRQ(ierr); 44564755cdSBarry Smith ierr = DMCreateGlobalVector(cda, &xcoor);CHKERRQ(ierr); 4547c6ae99SBarry Smith if (dim == 1) { 461321219cSEthan Coon if (bx == DMDA_BOUNDARY_PERIODIC) hx = (xmax-xmin)/M; 47ce00eea3SSatish Balay else hx = (xmax-xmin)/(M-1); 4847c6ae99SBarry Smith ierr = VecGetArray(xcoor,&coors);CHKERRQ(ierr); 4947c6ae99SBarry Smith for (i=0; i<isize; i++) { 5047c6ae99SBarry Smith coors[i] = xmin + hx*(i+istart); 5147c6ae99SBarry Smith } 5247c6ae99SBarry Smith ierr = VecRestoreArray(xcoor,&coors);CHKERRQ(ierr); 5347c6ae99SBarry Smith } else if (dim == 2) { 5447c6ae99SBarry Smith if (ymax <= ymin) SETERRQ2(((PetscObject)da)->comm,PETSC_ERR_ARG_INCOMP,"ymax must be larger than ymin %G %G",ymin,ymax); 551321219cSEthan Coon if (bx == DMDA_BOUNDARY_PERIODIC) hx = (xmax-xmin)/(M); 5647c6ae99SBarry Smith else hx = (xmax-xmin)/(M-1); 571321219cSEthan Coon if (by == DMDA_BOUNDARY_PERIODIC) hy = (ymax-ymin)/(N); 5847c6ae99SBarry Smith else hy = (ymax-ymin)/(N-1); 5947c6ae99SBarry Smith ierr = VecGetArray(xcoor,&coors);CHKERRQ(ierr); 6047c6ae99SBarry Smith cnt = 0; 6147c6ae99SBarry Smith for (j=0; j<jsize; j++) { 6247c6ae99SBarry Smith for (i=0; i<isize; i++) { 6347c6ae99SBarry Smith coors[cnt++] = xmin + hx*(i+istart); 6447c6ae99SBarry Smith coors[cnt++] = ymin + hy*(j+jstart); 6547c6ae99SBarry Smith } 6647c6ae99SBarry Smith } 6747c6ae99SBarry Smith ierr = VecRestoreArray(xcoor,&coors);CHKERRQ(ierr); 6847c6ae99SBarry Smith } else if (dim == 3) { 6947c6ae99SBarry Smith if (ymax <= ymin) SETERRQ2(((PetscObject)da)->comm,PETSC_ERR_ARG_INCOMP,"ymax must be larger than ymin %G %G",ymin,ymax); 7047c6ae99SBarry Smith if (zmax <= zmin) SETERRQ2(((PetscObject)da)->comm,PETSC_ERR_ARG_INCOMP,"zmax must be larger than zmin %G %G",zmin,zmax); 711321219cSEthan Coon if (bx == DMDA_BOUNDARY_PERIODIC) hx = (xmax-xmin)/(M); 7247c6ae99SBarry Smith else hx = (xmax-xmin)/(M-1); 731321219cSEthan Coon if (by == DMDA_BOUNDARY_PERIODIC) hy = (ymax-ymin)/(N); 7447c6ae99SBarry Smith else hy = (ymax-ymin)/(N-1); 751321219cSEthan Coon if (bz == DMDA_BOUNDARY_PERIODIC) hz_ = (zmax-zmin)/(P); 7647c6ae99SBarry Smith else hz_ = (zmax-zmin)/(P-1); 7747c6ae99SBarry Smith ierr = VecGetArray(xcoor,&coors);CHKERRQ(ierr); 7847c6ae99SBarry Smith cnt = 0; 7947c6ae99SBarry Smith for (k=0; k<ksize; k++) { 8047c6ae99SBarry Smith for (j=0; j<jsize; j++) { 8147c6ae99SBarry Smith for (i=0; i<isize; i++) { 8247c6ae99SBarry Smith coors[cnt++] = xmin + hx*(i+istart); 8347c6ae99SBarry Smith coors[cnt++] = ymin + hy*(j+jstart); 8447c6ae99SBarry Smith coors[cnt++] = zmin + hz_*(k+kstart); 8547c6ae99SBarry Smith } 8647c6ae99SBarry Smith } 8747c6ae99SBarry Smith } 8847c6ae99SBarry Smith ierr = VecRestoreArray(xcoor,&coors);CHKERRQ(ierr); 89*bfec8eecSBarry Smith } else SETERRQ1(((PetscObject)da)->comm,PETSC_ERR_SUP,"Cannot create uniform coordinates for this dimension %D\n",dim); 90aa219208SBarry Smith ierr = DMDASetCoordinates(da,xcoor);CHKERRQ(ierr); 9147c6ae99SBarry Smith ierr = PetscLogObjectParent(da,xcoor);CHKERRQ(ierr); 92fcfd50ebSBarry Smith ierr = VecDestroy(&xcoor);CHKERRQ(ierr); 9347c6ae99SBarry Smith PetscFunctionReturn(0); 9447c6ae99SBarry Smith } 9547c6ae99SBarry Smith 9647c6ae99SBarry Smith #undef __FUNCT__ 9747c6ae99SBarry Smith #define __FUNCT__ "VecView_MPI_Draw_DA1d" 9847c6ae99SBarry Smith PetscErrorCode VecView_MPI_Draw_DA1d(Vec xin,PetscViewer v) 9947c6ae99SBarry Smith { 1009a42bb27SBarry Smith DM da; 10147c6ae99SBarry Smith PetscErrorCode ierr; 10247c6ae99SBarry Smith PetscMPIInt rank,size,tag1,tag2; 10347c6ae99SBarry Smith PetscInt i,n,N,step,istart,isize,j; 10447c6ae99SBarry Smith MPI_Status status; 10547c6ae99SBarry Smith PetscReal coors[4],ymin,ymax,min,max,xmin,xmax,tmp,xgtmp; 10647c6ae99SBarry Smith const PetscScalar *array,*xg; 10747c6ae99SBarry Smith PetscDraw draw; 10847c6ae99SBarry Smith PetscBool isnull,showpoints = PETSC_FALSE; 10947c6ae99SBarry Smith MPI_Comm comm; 11047c6ae99SBarry Smith PetscDrawAxis axis; 11147c6ae99SBarry Smith Vec xcoor; 1121321219cSEthan Coon DMDABoundaryType bx; 11347c6ae99SBarry Smith 11447c6ae99SBarry Smith PetscFunctionBegin; 11547c6ae99SBarry Smith ierr = PetscViewerDrawGetDraw(v,0,&draw);CHKERRQ(ierr); 11647c6ae99SBarry Smith ierr = PetscDrawIsNull(draw,&isnull);CHKERRQ(ierr); if (isnull) PetscFunctionReturn(0); 11747c6ae99SBarry Smith 1183c0c59f3SBarry Smith ierr = PetscObjectQuery((PetscObject)xin,"DM",(PetscObject*)&da);CHKERRQ(ierr); 119aa219208SBarry Smith if (!da) SETERRQ(((PetscObject)xin)->comm,PETSC_ERR_ARG_WRONG,"Vector not generated from a DMDA"); 12047c6ae99SBarry Smith 121671f6225SBarry Smith ierr = PetscOptionsGetBool(PETSC_NULL,"-draw_vec_mark_points",&showpoints,PETSC_NULL);CHKERRQ(ierr); 12247c6ae99SBarry Smith 1231321219cSEthan Coon ierr = DMDAGetInfo(da,0,&N,0,0,0,0,0,&step,0,&bx,0,0,0);CHKERRQ(ierr); 124aa219208SBarry Smith ierr = DMDAGetCorners(da,&istart,0,0,&isize,0,0);CHKERRQ(ierr); 12547c6ae99SBarry Smith ierr = VecGetArrayRead(xin,&array);CHKERRQ(ierr); 12647c6ae99SBarry Smith ierr = VecGetLocalSize(xin,&n);CHKERRQ(ierr); 12747c6ae99SBarry Smith n = n/step; 12847c6ae99SBarry Smith 12947c6ae99SBarry Smith /* get coordinates of nodes */ 130aa219208SBarry Smith ierr = DMDAGetCoordinates(da,&xcoor);CHKERRQ(ierr); 13147c6ae99SBarry Smith if (!xcoor) { 132aa219208SBarry Smith ierr = DMDASetUniformCoordinates(da,0.0,1.0,0.0,0.0,0.0,0.0);CHKERRQ(ierr); 133aa219208SBarry Smith ierr = DMDAGetCoordinates(da,&xcoor);CHKERRQ(ierr); 13447c6ae99SBarry Smith } 13547c6ae99SBarry Smith ierr = VecGetArrayRead(xcoor,&xg);CHKERRQ(ierr); 13647c6ae99SBarry Smith 13747c6ae99SBarry Smith ierr = PetscObjectGetComm((PetscObject)xin,&comm);CHKERRQ(ierr); 13847c6ae99SBarry Smith ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 13947c6ae99SBarry Smith ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 14047c6ae99SBarry Smith 14147c6ae99SBarry Smith /* 14247c6ae99SBarry Smith Determine the min and max x coordinate in plot 14347c6ae99SBarry Smith */ 14447c6ae99SBarry Smith if (!rank) { 14547c6ae99SBarry Smith xmin = PetscRealPart(xg[0]); 14647c6ae99SBarry Smith } 14747c6ae99SBarry Smith if (rank == size-1) { 14847c6ae99SBarry Smith xmax = PetscRealPart(xg[n-1]); 14947c6ae99SBarry Smith } 15047c6ae99SBarry Smith ierr = MPI_Bcast(&xmin,1,MPIU_REAL,0,comm);CHKERRQ(ierr); 15147c6ae99SBarry Smith ierr = MPI_Bcast(&xmax,1,MPIU_REAL,size-1,comm);CHKERRQ(ierr); 15247c6ae99SBarry Smith 15347c6ae99SBarry Smith for (j=0; j<step; j++) { 15447c6ae99SBarry Smith ierr = PetscViewerDrawGetDraw(v,j,&draw);CHKERRQ(ierr); 15547c6ae99SBarry Smith ierr = PetscDrawCheckResizedWindow(draw);CHKERRQ(ierr); 15647c6ae99SBarry Smith 15747c6ae99SBarry Smith /* 15847c6ae99SBarry Smith Determine the min and max y coordinate in plot 15947c6ae99SBarry Smith */ 16047c6ae99SBarry Smith min = 1.e20; max = -1.e20; 16147c6ae99SBarry Smith for (i=0; i<n; i++) { 16247c6ae99SBarry Smith #if defined(PETSC_USE_COMPLEX) 16347c6ae99SBarry Smith if (PetscRealPart(array[j+i*step]) < min) min = PetscRealPart(array[j+i*step]); 16447c6ae99SBarry Smith if (PetscRealPart(array[j+i*step]) > max) max = PetscRealPart(array[j+i*step]); 16547c6ae99SBarry Smith #else 16647c6ae99SBarry Smith if (array[j+i*step] < min) min = array[j+i*step]; 16747c6ae99SBarry Smith if (array[j+i*step] > max) max = array[j+i*step]; 16847c6ae99SBarry Smith #endif 16947c6ae99SBarry Smith } 17047c6ae99SBarry Smith if (min + 1.e-10 > max) { 17147c6ae99SBarry Smith min -= 1.e-5; 17247c6ae99SBarry Smith max += 1.e-5; 17347c6ae99SBarry Smith } 174d9822059SBarry Smith ierr = MPI_Reduce(&min,&ymin,1,MPIU_REAL,MPIU_MIN,0,comm);CHKERRQ(ierr); 175d9822059SBarry Smith ierr = MPI_Reduce(&max,&ymax,1,MPIU_REAL,MPIU_MAX,0,comm);CHKERRQ(ierr); 17647c6ae99SBarry Smith 17747c6ae99SBarry Smith ierr = PetscDrawSynchronizedClear(draw);CHKERRQ(ierr); 17847c6ae99SBarry Smith ierr = PetscViewerDrawGetDrawAxis(v,j,&axis);CHKERRQ(ierr); 17947c6ae99SBarry Smith ierr = PetscLogObjectParent(draw,axis);CHKERRQ(ierr); 18047c6ae99SBarry Smith if (!rank) { 18147c6ae99SBarry Smith const char *title; 18247c6ae99SBarry Smith 18347c6ae99SBarry Smith ierr = PetscDrawAxisSetLimits(axis,xmin,xmax,ymin,ymax);CHKERRQ(ierr); 18447c6ae99SBarry Smith ierr = PetscDrawAxisDraw(axis);CHKERRQ(ierr); 18547c6ae99SBarry Smith ierr = PetscDrawGetCoordinates(draw,coors,coors+1,coors+2,coors+3);CHKERRQ(ierr); 186aa219208SBarry Smith ierr = DMDAGetFieldName(da,j,&title);CHKERRQ(ierr); 18747c6ae99SBarry Smith if (title) {ierr = PetscDrawSetTitle(draw,title);CHKERRQ(ierr);} 18847c6ae99SBarry Smith } 18947c6ae99SBarry Smith ierr = MPI_Bcast(coors,4,MPIU_REAL,0,comm);CHKERRQ(ierr); 19047c6ae99SBarry Smith if (rank) { 19147c6ae99SBarry Smith ierr = PetscDrawSetCoordinates(draw,coors[0],coors[1],coors[2],coors[3]);CHKERRQ(ierr); 19247c6ae99SBarry Smith } 19347c6ae99SBarry Smith 19447c6ae99SBarry Smith /* draw local part of vector */ 19547c6ae99SBarry Smith PetscObjectGetNewTag((PetscObject)xin,&tag1);CHKERRQ(ierr); 19647c6ae99SBarry Smith PetscObjectGetNewTag((PetscObject)xin,&tag2);CHKERRQ(ierr); 19747c6ae99SBarry Smith if (rank < size-1) { /*send value to right */ 19847c6ae99SBarry Smith ierr = MPI_Send((void*)&array[j+(n-1)*step],1,MPIU_REAL,rank+1,tag1,comm);CHKERRQ(ierr); 19947c6ae99SBarry Smith ierr = MPI_Send((void*)&xg[n-1],1,MPIU_REAL,rank+1,tag1,comm);CHKERRQ(ierr); 20047c6ae99SBarry Smith } 2011321219cSEthan Coon if (!rank && bx == DMDA_BOUNDARY_PERIODIC && size > 1) { /* first processor sends first value to last */ 20247c6ae99SBarry Smith ierr = MPI_Send((void*)&array[j],1,MPIU_REAL,size-1,tag2,comm);CHKERRQ(ierr); 20347c6ae99SBarry Smith } 20447c6ae99SBarry Smith 20547c6ae99SBarry Smith for (i=1; i<n; i++) { 20647c6ae99SBarry Smith #if !defined(PETSC_USE_COMPLEX) 20747c6ae99SBarry Smith ierr = PetscDrawLine(draw,xg[i-1],array[j+step*(i-1)],xg[i],array[j+step*i],PETSC_DRAW_RED);CHKERRQ(ierr); 20847c6ae99SBarry Smith #else 20947c6ae99SBarry Smith ierr = PetscDrawLine(draw,PetscRealPart(xg[i-1]),PetscRealPart(array[j+step*(i-1)]),PetscRealPart(xg[i]),PetscRealPart(array[j+step*i]),PETSC_DRAW_RED);CHKERRQ(ierr); 21047c6ae99SBarry Smith #endif 21147c6ae99SBarry Smith if (showpoints) { 21247c6ae99SBarry Smith ierr = PetscDrawPoint(draw,PetscRealPart(xg[i-1]),PetscRealPart(array[j+step*(i-1)]),PETSC_DRAW_BLACK);CHKERRQ(ierr); 21347c6ae99SBarry Smith } 21447c6ae99SBarry Smith } 21547c6ae99SBarry Smith if (rank) { /* receive value from left */ 21647c6ae99SBarry Smith ierr = MPI_Recv(&tmp,1,MPIU_REAL,rank-1,tag1,comm,&status);CHKERRQ(ierr); 21747c6ae99SBarry Smith ierr = MPI_Recv(&xgtmp,1,MPIU_REAL,rank-1,tag1,comm,&status);CHKERRQ(ierr); 21847c6ae99SBarry Smith #if !defined(PETSC_USE_COMPLEX) 21947c6ae99SBarry Smith ierr = PetscDrawLine(draw,xgtmp,tmp,xg[0],array[j],PETSC_DRAW_RED);CHKERRQ(ierr); 22047c6ae99SBarry Smith #else 22147c6ae99SBarry Smith ierr = PetscDrawLine(draw,xgtmp,tmp,PetscRealPart(xg[0]),PetscRealPart(array[j]),PETSC_DRAW_RED);CHKERRQ(ierr); 22247c6ae99SBarry Smith #endif 22347c6ae99SBarry Smith if (showpoints) { 22447c6ae99SBarry Smith ierr = PetscDrawPoint(draw,xgtmp,tmp,PETSC_DRAW_BLACK);CHKERRQ(ierr); 22547c6ae99SBarry Smith } 22647c6ae99SBarry Smith } 2271321219cSEthan Coon if (rank == size-1 && bx == DMDA_BOUNDARY_PERIODIC && size > 1) { 22847c6ae99SBarry Smith ierr = MPI_Recv(&tmp,1,MPIU_REAL,0,tag2,comm,&status);CHKERRQ(ierr); 22947c6ae99SBarry Smith #if !defined(PETSC_USE_COMPLEX) 23047c6ae99SBarry Smith ierr = PetscDrawLine(draw,xg[n-2],array[j+step*(n-1)],xg[n-1],tmp,PETSC_DRAW_RED);CHKERRQ(ierr); 23147c6ae99SBarry Smith #else 23247c6ae99SBarry Smith ierr = PetscDrawLine(draw,PetscRealPart(xg[n-2]),PetscRealPart(array[j+step*(n-1)]), 23347c6ae99SBarry Smith PetscRealPart(xg[n-1]),tmp,PETSC_DRAW_RED);CHKERRQ(ierr); 23447c6ae99SBarry Smith #endif 23547c6ae99SBarry Smith if (showpoints) { 23647c6ae99SBarry Smith ierr = PetscDrawPoint(draw,PetscRealPart(xg[n-2]),PetscRealPart(array[j+step*(n-1)]),PETSC_DRAW_BLACK);CHKERRQ(ierr); 23747c6ae99SBarry Smith } 23847c6ae99SBarry Smith } 23947c6ae99SBarry Smith ierr = PetscDrawSynchronizedFlush(draw);CHKERRQ(ierr); 24047c6ae99SBarry Smith ierr = PetscDrawPause(draw);CHKERRQ(ierr); 24147c6ae99SBarry Smith } 24247c6ae99SBarry Smith ierr = VecRestoreArrayRead(xcoor,&xg);CHKERRQ(ierr); 24347c6ae99SBarry Smith ierr = VecRestoreArrayRead(xin,&array);CHKERRQ(ierr); 24447c6ae99SBarry Smith PetscFunctionReturn(0); 24547c6ae99SBarry Smith } 24647c6ae99SBarry Smith 247