1cb1e1211SMatthew G Knepley #include <petsc-private/dmpleximpl.h> /*I "petscdmplex.h" I*/ 2cb1e1211SMatthew G Knepley 30f2d7e86SMatthew G. Knepley #include <petsc-private/petscfeimpl.h> 415496722SMatthew G. Knepley #include <petsc-private/petscfvimpl.h> 5a0845e3aSMatthew G. Knepley 6cb1e1211SMatthew G Knepley #undef __FUNCT__ 7cb1e1211SMatthew G Knepley #define __FUNCT__ "DMPlexGetScale" 8cb1e1211SMatthew G Knepley PetscErrorCode DMPlexGetScale(DM dm, PetscUnit unit, PetscReal *scale) 9cb1e1211SMatthew G Knepley { 10cb1e1211SMatthew G Knepley DM_Plex *mesh = (DM_Plex*) dm->data; 11cb1e1211SMatthew G Knepley 12cb1e1211SMatthew G Knepley PetscFunctionBegin; 13cb1e1211SMatthew G Knepley PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 14cb1e1211SMatthew G Knepley PetscValidPointer(scale, 3); 15cb1e1211SMatthew G Knepley *scale = mesh->scale[unit]; 16cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 17cb1e1211SMatthew G Knepley } 18cb1e1211SMatthew G Knepley 19cb1e1211SMatthew G Knepley #undef __FUNCT__ 20cb1e1211SMatthew G Knepley #define __FUNCT__ "DMPlexSetScale" 21cb1e1211SMatthew G Knepley PetscErrorCode DMPlexSetScale(DM dm, PetscUnit unit, PetscReal scale) 22cb1e1211SMatthew G Knepley { 23cb1e1211SMatthew G Knepley DM_Plex *mesh = (DM_Plex*) dm->data; 24cb1e1211SMatthew G Knepley 25cb1e1211SMatthew G Knepley PetscFunctionBegin; 26cb1e1211SMatthew G Knepley PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 27cb1e1211SMatthew G Knepley mesh->scale[unit] = scale; 28cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 29cb1e1211SMatthew G Knepley } 30cb1e1211SMatthew G Knepley 31cb1e1211SMatthew G Knepley PETSC_STATIC_INLINE PetscInt epsilon(PetscInt i, PetscInt j, PetscInt k) 32cb1e1211SMatthew G Knepley { 33cb1e1211SMatthew G Knepley switch (i) { 34cb1e1211SMatthew G Knepley case 0: 35cb1e1211SMatthew G Knepley switch (j) { 36cb1e1211SMatthew G Knepley case 0: return 0; 37cb1e1211SMatthew G Knepley case 1: 38cb1e1211SMatthew G Knepley switch (k) { 39cb1e1211SMatthew G Knepley case 0: return 0; 40cb1e1211SMatthew G Knepley case 1: return 0; 41cb1e1211SMatthew G Knepley case 2: return 1; 42cb1e1211SMatthew G Knepley } 43cb1e1211SMatthew G Knepley case 2: 44cb1e1211SMatthew G Knepley switch (k) { 45cb1e1211SMatthew G Knepley case 0: return 0; 46cb1e1211SMatthew G Knepley case 1: return -1; 47cb1e1211SMatthew G Knepley case 2: return 0; 48cb1e1211SMatthew G Knepley } 49cb1e1211SMatthew G Knepley } 50cb1e1211SMatthew G Knepley case 1: 51cb1e1211SMatthew G Knepley switch (j) { 52cb1e1211SMatthew G Knepley case 0: 53cb1e1211SMatthew G Knepley switch (k) { 54cb1e1211SMatthew G Knepley case 0: return 0; 55cb1e1211SMatthew G Knepley case 1: return 0; 56cb1e1211SMatthew G Knepley case 2: return -1; 57cb1e1211SMatthew G Knepley } 58cb1e1211SMatthew G Knepley case 1: return 0; 59cb1e1211SMatthew G Knepley case 2: 60cb1e1211SMatthew G Knepley switch (k) { 61cb1e1211SMatthew G Knepley case 0: return 1; 62cb1e1211SMatthew G Knepley case 1: return 0; 63cb1e1211SMatthew G Knepley case 2: return 0; 64cb1e1211SMatthew G Knepley } 65cb1e1211SMatthew G Knepley } 66cb1e1211SMatthew G Knepley case 2: 67cb1e1211SMatthew G Knepley switch (j) { 68cb1e1211SMatthew G Knepley case 0: 69cb1e1211SMatthew G Knepley switch (k) { 70cb1e1211SMatthew G Knepley case 0: return 0; 71cb1e1211SMatthew G Knepley case 1: return 1; 72cb1e1211SMatthew G Knepley case 2: return 0; 73cb1e1211SMatthew G Knepley } 74cb1e1211SMatthew G Knepley case 1: 75cb1e1211SMatthew G Knepley switch (k) { 76cb1e1211SMatthew G Knepley case 0: return -1; 77cb1e1211SMatthew G Knepley case 1: return 0; 78cb1e1211SMatthew G Knepley case 2: return 0; 79cb1e1211SMatthew G Knepley } 80cb1e1211SMatthew G Knepley case 2: return 0; 81cb1e1211SMatthew G Knepley } 82cb1e1211SMatthew G Knepley } 83cb1e1211SMatthew G Knepley return 0; 84cb1e1211SMatthew G Knepley } 85cb1e1211SMatthew G Knepley 86cb1e1211SMatthew G Knepley #undef __FUNCT__ 87cb1e1211SMatthew G Knepley #define __FUNCT__ "DMPlexCreateRigidBody" 88cb1e1211SMatthew G Knepley /*@C 89cb1e1211SMatthew G Knepley DMPlexCreateRigidBody - create rigid body modes from coordinates 90cb1e1211SMatthew G Knepley 91cb1e1211SMatthew G Knepley Collective on DM 92cb1e1211SMatthew G Knepley 93cb1e1211SMatthew G Knepley Input Arguments: 94cb1e1211SMatthew G Knepley + dm - the DM 95cb1e1211SMatthew G Knepley . section - the local section associated with the rigid field, or NULL for the default section 96cb1e1211SMatthew G Knepley - globalSection - the global section associated with the rigid field, or NULL for the default section 97cb1e1211SMatthew G Knepley 98cb1e1211SMatthew G Knepley Output Argument: 99cb1e1211SMatthew G Knepley . sp - the null space 100cb1e1211SMatthew G Knepley 101cb1e1211SMatthew G Knepley Note: This is necessary to take account of Dirichlet conditions on the displacements 102cb1e1211SMatthew G Knepley 103cb1e1211SMatthew G Knepley Level: advanced 104cb1e1211SMatthew G Knepley 105cb1e1211SMatthew G Knepley .seealso: MatNullSpaceCreate() 106cb1e1211SMatthew G Knepley @*/ 107cb1e1211SMatthew G Knepley PetscErrorCode DMPlexCreateRigidBody(DM dm, PetscSection section, PetscSection globalSection, MatNullSpace *sp) 108cb1e1211SMatthew G Knepley { 109cb1e1211SMatthew G Knepley MPI_Comm comm; 110cb1e1211SMatthew G Knepley Vec coordinates, localMode, mode[6]; 111cb1e1211SMatthew G Knepley PetscSection coordSection; 112cb1e1211SMatthew G Knepley PetscScalar *coords; 113cb1e1211SMatthew G Knepley PetscInt dim, vStart, vEnd, v, n, m, d, i, j; 114cb1e1211SMatthew G Knepley PetscErrorCode ierr; 115cb1e1211SMatthew G Knepley 116cb1e1211SMatthew G Knepley PetscFunctionBegin; 117cb1e1211SMatthew G Knepley ierr = PetscObjectGetComm((PetscObject)dm,&comm);CHKERRQ(ierr); 118c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 119cb1e1211SMatthew G Knepley if (dim == 1) { 120cb1e1211SMatthew G Knepley ierr = MatNullSpaceCreate(comm, PETSC_TRUE, 0, NULL, sp);CHKERRQ(ierr); 121cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 122cb1e1211SMatthew G Knepley } 123cb1e1211SMatthew G Knepley if (!section) {ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr);} 124cb1e1211SMatthew G Knepley if (!globalSection) {ierr = DMGetDefaultGlobalSection(dm, &globalSection);CHKERRQ(ierr);} 125cb1e1211SMatthew G Knepley ierr = PetscSectionGetConstrainedStorageSize(globalSection, &n);CHKERRQ(ierr); 126cb1e1211SMatthew G Knepley ierr = DMPlexGetDepthStratum(dm, 0, &vStart, &vEnd);CHKERRQ(ierr); 12769d8a9ceSMatthew G. Knepley ierr = DMGetCoordinateSection(dm, &coordSection);CHKERRQ(ierr); 128cb1e1211SMatthew G Knepley ierr = DMGetCoordinatesLocal(dm, &coordinates);CHKERRQ(ierr); 129cb1e1211SMatthew G Knepley m = (dim*(dim+1))/2; 130cb1e1211SMatthew G Knepley ierr = VecCreate(comm, &mode[0]);CHKERRQ(ierr); 131cb1e1211SMatthew G Knepley ierr = VecSetSizes(mode[0], n, PETSC_DETERMINE);CHKERRQ(ierr); 132cb1e1211SMatthew G Knepley ierr = VecSetUp(mode[0]);CHKERRQ(ierr); 133cb1e1211SMatthew G Knepley for (i = 1; i < m; ++i) {ierr = VecDuplicate(mode[0], &mode[i]);CHKERRQ(ierr);} 134cb1e1211SMatthew G Knepley /* Assume P1 */ 135cb1e1211SMatthew G Knepley ierr = DMGetLocalVector(dm, &localMode);CHKERRQ(ierr); 136cb1e1211SMatthew G Knepley for (d = 0; d < dim; ++d) { 137cb1e1211SMatthew G Knepley PetscScalar values[3] = {0.0, 0.0, 0.0}; 138cb1e1211SMatthew G Knepley 139cb1e1211SMatthew G Knepley values[d] = 1.0; 140cb1e1211SMatthew G Knepley ierr = VecSet(localMode, 0.0);CHKERRQ(ierr); 141cb1e1211SMatthew G Knepley for (v = vStart; v < vEnd; ++v) { 142cb1e1211SMatthew G Knepley ierr = DMPlexVecSetClosure(dm, section, localMode, v, values, INSERT_VALUES);CHKERRQ(ierr); 143cb1e1211SMatthew G Knepley } 144cb1e1211SMatthew G Knepley ierr = DMLocalToGlobalBegin(dm, localMode, INSERT_VALUES, mode[d]);CHKERRQ(ierr); 145cb1e1211SMatthew G Knepley ierr = DMLocalToGlobalEnd(dm, localMode, INSERT_VALUES, mode[d]);CHKERRQ(ierr); 146cb1e1211SMatthew G Knepley } 147cb1e1211SMatthew G Knepley ierr = VecGetArray(coordinates, &coords);CHKERRQ(ierr); 148cb1e1211SMatthew G Knepley for (d = dim; d < dim*(dim+1)/2; ++d) { 149cb1e1211SMatthew G Knepley PetscInt i, j, k = dim > 2 ? d - dim : d; 150cb1e1211SMatthew G Knepley 151cb1e1211SMatthew G Knepley ierr = VecSet(localMode, 0.0);CHKERRQ(ierr); 152cb1e1211SMatthew G Knepley for (v = vStart; v < vEnd; ++v) { 153cb1e1211SMatthew G Knepley PetscScalar values[3] = {0.0, 0.0, 0.0}; 154cb1e1211SMatthew G Knepley PetscInt off; 155cb1e1211SMatthew G Knepley 156cb1e1211SMatthew G Knepley ierr = PetscSectionGetOffset(coordSection, v, &off);CHKERRQ(ierr); 157cb1e1211SMatthew G Knepley for (i = 0; i < dim; ++i) { 158cb1e1211SMatthew G Knepley for (j = 0; j < dim; ++j) { 159cb1e1211SMatthew G Knepley values[j] += epsilon(i, j, k)*PetscRealPart(coords[off+i]); 160cb1e1211SMatthew G Knepley } 161cb1e1211SMatthew G Knepley } 162cb1e1211SMatthew G Knepley ierr = DMPlexVecSetClosure(dm, section, localMode, v, values, INSERT_VALUES);CHKERRQ(ierr); 163cb1e1211SMatthew G Knepley } 164cb1e1211SMatthew G Knepley ierr = DMLocalToGlobalBegin(dm, localMode, INSERT_VALUES, mode[d]);CHKERRQ(ierr); 165cb1e1211SMatthew G Knepley ierr = DMLocalToGlobalEnd(dm, localMode, INSERT_VALUES, mode[d]);CHKERRQ(ierr); 166cb1e1211SMatthew G Knepley } 167cb1e1211SMatthew G Knepley ierr = VecRestoreArray(coordinates, &coords);CHKERRQ(ierr); 168cb1e1211SMatthew G Knepley ierr = DMRestoreLocalVector(dm, &localMode);CHKERRQ(ierr); 169cb1e1211SMatthew G Knepley for (i = 0; i < dim; ++i) {ierr = VecNormalize(mode[i], NULL);CHKERRQ(ierr);} 170cb1e1211SMatthew G Knepley /* Orthonormalize system */ 171cb1e1211SMatthew G Knepley for (i = dim; i < m; ++i) { 172cb1e1211SMatthew G Knepley PetscScalar dots[6]; 173cb1e1211SMatthew G Knepley 174cb1e1211SMatthew G Knepley ierr = VecMDot(mode[i], i, mode, dots);CHKERRQ(ierr); 175cb1e1211SMatthew G Knepley for (j = 0; j < i; ++j) dots[j] *= -1.0; 176cb1e1211SMatthew G Knepley ierr = VecMAXPY(mode[i], i, dots, mode);CHKERRQ(ierr); 177cb1e1211SMatthew G Knepley ierr = VecNormalize(mode[i], NULL);CHKERRQ(ierr); 178cb1e1211SMatthew G Knepley } 179cb1e1211SMatthew G Knepley ierr = MatNullSpaceCreate(comm, PETSC_FALSE, m, mode, sp);CHKERRQ(ierr); 180cb1e1211SMatthew G Knepley for (i = 0; i< m; ++i) {ierr = VecDestroy(&mode[i]);CHKERRQ(ierr);} 181cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 182cb1e1211SMatthew G Knepley } 183cb1e1211SMatthew G Knepley 184cb1e1211SMatthew G Knepley #undef __FUNCT__ 185a18a7fb9SMatthew G. Knepley #define __FUNCT__ "DMPlexProjectFunctionLabelLocal" 186a18a7fb9SMatthew G. Knepley PetscErrorCode DMPlexProjectFunctionLabelLocal(DM dm, DMLabel label, PetscInt numIds, const PetscInt ids[], PetscFE fe[], void (**funcs)(const PetscReal [], PetscScalar *, void *), void **ctxs, InsertMode mode, Vec localX) 187a18a7fb9SMatthew G. Knepley { 188a18a7fb9SMatthew G. Knepley PetscDualSpace *sp; 189a18a7fb9SMatthew G. Knepley PetscSection section; 190a18a7fb9SMatthew G. Knepley PetscScalar *values; 191ad96f515SMatthew G. Knepley PetscBool *fieldActive; 192a18a7fb9SMatthew G. Knepley PetscInt numFields, numComp, dim, spDim, totDim = 0, numValues, cStart, cEnd, f, d, v, i, comp; 193a18a7fb9SMatthew G. Knepley PetscErrorCode ierr; 194a18a7fb9SMatthew G. Knepley 195a18a7fb9SMatthew G. Knepley PetscFunctionBegin; 196c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 197a18a7fb9SMatthew G. Knepley ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr); 198a18a7fb9SMatthew G. Knepley ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr); 199*e1d0b1adSMatthew G. Knepley ierr = PetscMalloc1(numFields,&sp);CHKERRQ(ierr); 200a18a7fb9SMatthew G. Knepley for (f = 0; f < numFields; ++f) { 201a18a7fb9SMatthew G. Knepley ierr = PetscFEGetDualSpace(fe[f], &sp[f]);CHKERRQ(ierr); 202a18a7fb9SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe[f], &numComp);CHKERRQ(ierr); 203a18a7fb9SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(sp[f], &spDim);CHKERRQ(ierr); 204a18a7fb9SMatthew G. Knepley totDim += spDim*numComp; 205a18a7fb9SMatthew G. Knepley } 206a18a7fb9SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr); 207a18a7fb9SMatthew G. Knepley ierr = DMPlexVecGetClosure(dm, section, localX, cStart, &numValues, NULL);CHKERRQ(ierr); 208a18a7fb9SMatthew G. Knepley if (numValues != totDim) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "The section cell closure size %d != dual space dimension %d", numValues, totDim); 209a18a7fb9SMatthew G. Knepley ierr = DMGetWorkArray(dm, numValues, PETSC_SCALAR, &values);CHKERRQ(ierr); 210ad96f515SMatthew G. Knepley ierr = DMGetWorkArray(dm, numFields, PETSC_BOOL, &fieldActive);CHKERRQ(ierr); 211ad96f515SMatthew G. Knepley for (f = 0; f < numFields; ++f) fieldActive[f] = funcs[f] ? PETSC_TRUE : PETSC_FALSE; 212a18a7fb9SMatthew G. Knepley for (i = 0; i < numIds; ++i) { 213a18a7fb9SMatthew G. Knepley IS pointIS; 214a18a7fb9SMatthew G. Knepley const PetscInt *points; 215a18a7fb9SMatthew G. Knepley PetscInt n, p; 216a18a7fb9SMatthew G. Knepley 217a18a7fb9SMatthew G. Knepley ierr = DMLabelGetStratumIS(label, ids[i], &pointIS);CHKERRQ(ierr); 218a18a7fb9SMatthew G. Knepley ierr = ISGetLocalSize(pointIS, &n);CHKERRQ(ierr); 219a18a7fb9SMatthew G. Knepley ierr = ISGetIndices(pointIS, &points);CHKERRQ(ierr); 220a18a7fb9SMatthew G. Knepley for (p = 0; p < n; ++p) { 221a18a7fb9SMatthew G. Knepley const PetscInt point = points[p]; 222*e1d0b1adSMatthew G. Knepley PetscFECellGeom geom; 223a18a7fb9SMatthew G. Knepley 224a18a7fb9SMatthew G. Knepley if ((point < cStart) || (point >= cEnd)) continue; 225*e1d0b1adSMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dm, point, NULL, geom.v0, geom.J, NULL, &geom.detJ);CHKERRQ(ierr); 226a18a7fb9SMatthew G. Knepley for (f = 0, v = 0; f < numFields; ++f) { 227a18a7fb9SMatthew G. Knepley void * const ctx = ctxs ? ctxs[f] : NULL; 228a18a7fb9SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe[f], &numComp);CHKERRQ(ierr); 229a18a7fb9SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(sp[f], &spDim);CHKERRQ(ierr); 230a18a7fb9SMatthew G. Knepley for (d = 0; d < spDim; ++d) { 231a18a7fb9SMatthew G. Knepley if (funcs[f]) { 232*e1d0b1adSMatthew G. Knepley ierr = PetscDualSpaceApply(sp[f], d, &geom, numComp, funcs[f], ctx, &values[v]);CHKERRQ(ierr); 233a18a7fb9SMatthew G. Knepley } else { 234a18a7fb9SMatthew G. Knepley for (comp = 0; comp < numComp; ++comp) values[v+comp] = 0.0; 235a18a7fb9SMatthew G. Knepley } 236a18a7fb9SMatthew G. Knepley v += numComp; 237a18a7fb9SMatthew G. Knepley } 238a18a7fb9SMatthew G. Knepley } 239ad96f515SMatthew G. Knepley ierr = DMPlexVecSetFieldClosure_Internal(dm, section, localX, fieldActive, point, values, mode);CHKERRQ(ierr); 240a18a7fb9SMatthew G. Knepley } 241a18a7fb9SMatthew G. Knepley ierr = ISRestoreIndices(pointIS, &points);CHKERRQ(ierr); 242a18a7fb9SMatthew G. Knepley ierr = ISDestroy(&pointIS);CHKERRQ(ierr); 243a18a7fb9SMatthew G. Knepley } 244a18a7fb9SMatthew G. Knepley ierr = DMRestoreWorkArray(dm, numValues, PETSC_SCALAR, &values);CHKERRQ(ierr); 245ad96f515SMatthew G. Knepley ierr = DMRestoreWorkArray(dm, numFields, PETSC_BOOL, &fieldActive);CHKERRQ(ierr); 246*e1d0b1adSMatthew G. Knepley ierr = PetscFree(sp);CHKERRQ(ierr); 247a18a7fb9SMatthew G. Knepley PetscFunctionReturn(0); 248a18a7fb9SMatthew G. Knepley } 249a18a7fb9SMatthew G. Knepley 250a18a7fb9SMatthew G. Knepley #undef __FUNCT__ 251cb1e1211SMatthew G Knepley #define __FUNCT__ "DMPlexProjectFunctionLocal" 2520f2d7e86SMatthew G. Knepley PetscErrorCode DMPlexProjectFunctionLocal(DM dm, void (**funcs)(const PetscReal [], PetscScalar *, void *), void **ctxs, InsertMode mode, Vec localX) 253cb1e1211SMatthew G Knepley { 25472f94c41SMatthew G. Knepley PetscDualSpace *sp; 25515496722SMatthew G. Knepley PetscInt *numComp; 25672f94c41SMatthew G. Knepley PetscSection section; 25772f94c41SMatthew G. Knepley PetscScalar *values; 25815496722SMatthew G. Knepley PetscInt numFields, dim, spDim, totDim = 0, numValues, cStart, cEnd, c, f, d, v, comp; 259cb1e1211SMatthew G Knepley PetscErrorCode ierr; 260cb1e1211SMatthew G Knepley 261cb1e1211SMatthew G Knepley PetscFunctionBegin; 262cb1e1211SMatthew G Knepley ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr); 26372f94c41SMatthew G. Knepley ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr); 26415496722SMatthew G. Knepley ierr = PetscMalloc2(numFields, &sp, numFields, &numComp);CHKERRQ(ierr); 26572f94c41SMatthew G. Knepley for (f = 0; f < numFields; ++f) { 26615496722SMatthew G. Knepley PetscObject obj; 26715496722SMatthew G. Knepley PetscClassId id; 2680f2d7e86SMatthew G. Knepley 26915496722SMatthew G. Knepley ierr = DMGetField(dm, f, &obj);CHKERRQ(ierr); 27015496722SMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 27115496722SMatthew G. Knepley if (id == PETSCFE_CLASSID) { 27215496722SMatthew G. Knepley PetscFE fe = (PetscFE) obj; 27315496722SMatthew G. Knepley 27415496722SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &numComp[f]);CHKERRQ(ierr); 2750f2d7e86SMatthew G. Knepley ierr = PetscFEGetDualSpace(fe, &sp[f]);CHKERRQ(ierr); 27615496722SMatthew G. Knepley ierr = PetscObjectReference((PetscObject) sp[f]);CHKERRQ(ierr); 27715496722SMatthew G. Knepley } else if (id == PETSCFV_CLASSID) { 27815496722SMatthew G. Knepley PetscFV fv = (PetscFV) obj; 27915496722SMatthew G. Knepley PetscQuadrature q; 28015496722SMatthew G. Knepley 28115496722SMatthew G. Knepley ierr = PetscFVGetNumComponents(fv, &numComp[f]);CHKERRQ(ierr); 28215496722SMatthew G. Knepley ierr = PetscFVGetQuadrature(fv, &q);CHKERRQ(ierr); 28315496722SMatthew G. Knepley ierr = PetscDualSpaceCreate(PetscObjectComm((PetscObject) fv), &sp[f]);CHKERRQ(ierr); 28415496722SMatthew G. Knepley ierr = PetscDualSpaceSetDM(sp[f], dm);CHKERRQ(ierr); 28515496722SMatthew G. Knepley ierr = PetscDualSpaceSetType(sp[f], PETSCDUALSPACESIMPLE);CHKERRQ(ierr); 28615496722SMatthew G. Knepley ierr = PetscDualSpaceSimpleSetDimension(sp[f], 1);CHKERRQ(ierr); 28715496722SMatthew G. Knepley ierr = PetscDualSpaceSimpleSetFunctional(sp[f], 0, q);CHKERRQ(ierr); 28815496722SMatthew G. Knepley } else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", f); 28972f94c41SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(sp[f], &spDim);CHKERRQ(ierr); 29015496722SMatthew G. Knepley totDim += spDim*numComp[f]; 291cb1e1211SMatthew G Knepley } 292c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 29372f94c41SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr); 29472f94c41SMatthew G. Knepley ierr = DMPlexVecGetClosure(dm, section, localX, cStart, &numValues, NULL);CHKERRQ(ierr); 29572f94c41SMatthew G. Knepley if (numValues != totDim) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "The section cell closure size %d != dual space dimension %d", numValues, totDim); 29672f94c41SMatthew G. Knepley ierr = DMGetWorkArray(dm, numValues, PETSC_SCALAR, &values);CHKERRQ(ierr); 29772f94c41SMatthew G. Knepley for (c = cStart; c < cEnd; ++c) { 298*e1d0b1adSMatthew G. Knepley PetscFECellGeom geom; 299cb1e1211SMatthew G Knepley 300*e1d0b1adSMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dm, c, NULL, geom.v0, geom.J, NULL, &geom.detJ);CHKERRQ(ierr); 30172f94c41SMatthew G. Knepley for (f = 0, v = 0; f < numFields; ++f) { 302c110b1eeSGeoffrey Irving void *const ctx = ctxs ? ctxs[f] : NULL; 3030f2d7e86SMatthew G. Knepley 30472f94c41SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(sp[f], &spDim);CHKERRQ(ierr); 30572f94c41SMatthew G. Knepley for (d = 0; d < spDim; ++d) { 306120386c5SMatthew G. Knepley if (funcs[f]) { 307*e1d0b1adSMatthew G. Knepley ierr = PetscDualSpaceApply(sp[f], d, &geom, numComp[f], funcs[f], ctx, &values[v]);CHKERRQ(ierr); 308120386c5SMatthew G. Knepley } else { 30915496722SMatthew G. Knepley for (comp = 0; comp < numComp[f]; ++comp) values[v+comp] = 0.0; 310120386c5SMatthew G. Knepley } 31115496722SMatthew G. Knepley v += numComp[f]; 312cb1e1211SMatthew G Knepley } 313cb1e1211SMatthew G Knepley } 31472f94c41SMatthew G. Knepley ierr = DMPlexVecSetClosure(dm, section, localX, c, values, mode);CHKERRQ(ierr); 315cb1e1211SMatthew G Knepley } 31672f94c41SMatthew G. Knepley ierr = DMRestoreWorkArray(dm, numValues, PETSC_SCALAR, &values);CHKERRQ(ierr); 31715496722SMatthew G. Knepley for (f = 0; f < numFields; ++f) {ierr = PetscDualSpaceDestroy(&sp[f]);CHKERRQ(ierr);} 31815496722SMatthew G. Knepley ierr = PetscFree2(sp, numComp);CHKERRQ(ierr); 319cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 320cb1e1211SMatthew G Knepley } 321cb1e1211SMatthew G Knepley 322cb1e1211SMatthew G Knepley #undef __FUNCT__ 323cb1e1211SMatthew G Knepley #define __FUNCT__ "DMPlexProjectFunction" 324cb1e1211SMatthew G Knepley /*@C 325cb1e1211SMatthew G Knepley DMPlexProjectFunction - This projects the given function into the function space provided. 326cb1e1211SMatthew G Knepley 327cb1e1211SMatthew G Knepley Input Parameters: 328cb1e1211SMatthew G Knepley + dm - The DM 32972f94c41SMatthew G. Knepley . funcs - The coordinate functions to evaluate, one per field 330c110b1eeSGeoffrey Irving . ctxs - Optional array of contexts to pass to each coordinate function. ctxs itself may be null. 331cb1e1211SMatthew G Knepley - mode - The insertion mode for values 332cb1e1211SMatthew G Knepley 333cb1e1211SMatthew G Knepley Output Parameter: 334cb1e1211SMatthew G Knepley . X - vector 335cb1e1211SMatthew G Knepley 336cb1e1211SMatthew G Knepley Level: developer 337cb1e1211SMatthew G Knepley 338878cb397SSatish Balay .seealso: DMPlexComputeL2Diff() 339878cb397SSatish Balay @*/ 3400f2d7e86SMatthew G. Knepley PetscErrorCode DMPlexProjectFunction(DM dm, void (**funcs)(const PetscReal [], PetscScalar *, void *), void **ctxs, InsertMode mode, Vec X) 341cb1e1211SMatthew G Knepley { 342cb1e1211SMatthew G Knepley Vec localX; 343cb1e1211SMatthew G Knepley PetscErrorCode ierr; 344cb1e1211SMatthew G Knepley 345cb1e1211SMatthew G Knepley PetscFunctionBegin; 3469a800dd8SMatthew G. Knepley PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 347cb1e1211SMatthew G Knepley ierr = DMGetLocalVector(dm, &localX);CHKERRQ(ierr); 3480f2d7e86SMatthew G. Knepley ierr = DMPlexProjectFunctionLocal(dm, funcs, ctxs, mode, localX);CHKERRQ(ierr); 349cb1e1211SMatthew G Knepley ierr = DMLocalToGlobalBegin(dm, localX, mode, X);CHKERRQ(ierr); 350cb1e1211SMatthew G Knepley ierr = DMLocalToGlobalEnd(dm, localX, mode, X);CHKERRQ(ierr); 351cb1e1211SMatthew G Knepley ierr = DMRestoreLocalVector(dm, &localX);CHKERRQ(ierr); 352cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 353cb1e1211SMatthew G Knepley } 354cb1e1211SMatthew G Knepley 35555f2e967SMatthew G. Knepley #undef __FUNCT__ 3560f2d7e86SMatthew G. Knepley #define __FUNCT__ "DMPlexProjectFieldLocal" 3573bc3b0a0SMatthew G. Knepley PetscErrorCode DMPlexProjectFieldLocal(DM dm, Vec localU, void (**funcs)(const PetscScalar[], const PetscScalar[], const PetscScalar[], const PetscScalar[], const PetscScalar[], const PetscScalar[], const PetscReal [], PetscScalar []), InsertMode mode, Vec localX) 3580f2d7e86SMatthew G. Knepley { 3590f2d7e86SMatthew G. Knepley DM dmAux; 3602764a2aaSMatthew G. Knepley PetscDS prob, probAux; 3610f2d7e86SMatthew G. Knepley Vec A; 362326413afSMatthew G. Knepley PetscSection section, sectionAux; 363326413afSMatthew G. Knepley PetscScalar *values, *u, *u_x, *a, *a_x; 3640f2d7e86SMatthew G. Knepley PetscReal *x, *v0, *J, *invJ, detJ, **basisField, **basisFieldDer, **basisFieldAux, **basisFieldDerAux; 365326413afSMatthew G. Knepley PetscInt Nf, dim, spDim, totDim, numValues, cStart, cEnd, c, f, d, v, comp; 3660f2d7e86SMatthew G. Knepley PetscErrorCode ierr; 3670f2d7e86SMatthew G. Knepley 3680f2d7e86SMatthew G. Knepley PetscFunctionBegin; 3692764a2aaSMatthew G. Knepley ierr = DMGetDS(dm, &prob);CHKERRQ(ierr); 370c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 3710f2d7e86SMatthew G. Knepley ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr); 3720f2d7e86SMatthew G. Knepley ierr = PetscSectionGetNumFields(section, &Nf);CHKERRQ(ierr); 3730f2d7e86SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr); 3742764a2aaSMatthew G. Knepley ierr = PetscDSGetTotalDimension(prob, &totDim);CHKERRQ(ierr); 3752764a2aaSMatthew G. Knepley ierr = PetscDSGetTabulation(prob, &basisField, &basisFieldDer);CHKERRQ(ierr); 3762764a2aaSMatthew G. Knepley ierr = PetscDSGetEvaluationArrays(prob, &u, NULL, &u_x);CHKERRQ(ierr); 3772764a2aaSMatthew G. Knepley ierr = PetscDSGetRefCoordArrays(prob, &x, NULL);CHKERRQ(ierr); 3780f2d7e86SMatthew G. Knepley ierr = PetscObjectQuery((PetscObject) dm, "dmAux", (PetscObject *) &dmAux);CHKERRQ(ierr); 3790f2d7e86SMatthew G. Knepley ierr = PetscObjectQuery((PetscObject) dm, "A", (PetscObject *) &A);CHKERRQ(ierr); 3800f2d7e86SMatthew G. Knepley if (dmAux) { 3812764a2aaSMatthew G. Knepley ierr = DMGetDS(dmAux, &probAux);CHKERRQ(ierr); 382326413afSMatthew G. Knepley ierr = DMGetDefaultSection(dmAux, §ionAux);CHKERRQ(ierr); 3832764a2aaSMatthew G. Knepley ierr = PetscDSGetTabulation(prob, &basisFieldAux, &basisFieldDerAux);CHKERRQ(ierr); 3842764a2aaSMatthew G. Knepley ierr = PetscDSGetEvaluationArrays(probAux, &a, NULL, &a_x);CHKERRQ(ierr); 3850f2d7e86SMatthew G. Knepley } 3860f2d7e86SMatthew G. Knepley ierr = DMPlexInsertBoundaryValuesFEM(dm, localU);CHKERRQ(ierr); 3870f2d7e86SMatthew G. Knepley ierr = DMPlexVecGetClosure(dm, section, localX, cStart, &numValues, NULL);CHKERRQ(ierr); 3880f2d7e86SMatthew G. Knepley if (numValues != totDim) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "The section cell closure size %d != dual space dimension %d", numValues, totDim); 3890f2d7e86SMatthew G. Knepley ierr = DMGetWorkArray(dm, numValues, PETSC_SCALAR, &values);CHKERRQ(ierr); 3900f2d7e86SMatthew G. Knepley ierr = PetscMalloc3(dim,&v0,dim*dim,&J,dim*dim,&invJ);CHKERRQ(ierr); 3910f2d7e86SMatthew G. Knepley for (c = cStart; c < cEnd; ++c) { 392326413afSMatthew G. Knepley PetscScalar *coefficients = NULL, *coefficientsAux = NULL; 393326413afSMatthew G. Knepley 3948e0841e0SMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dm, c, NULL, v0, J, invJ, &detJ);CHKERRQ(ierr); 395326413afSMatthew G. Knepley ierr = DMPlexVecGetClosure(dm, section, localU, c, NULL, &coefficients);CHKERRQ(ierr); 396326413afSMatthew G. Knepley if (dmAux) {ierr = DMPlexVecGetClosure(dmAux, sectionAux, A, c, NULL, &coefficientsAux);CHKERRQ(ierr);} 3970f2d7e86SMatthew G. Knepley for (f = 0, v = 0; f < Nf; ++f) { 3983113607cSMatthew G. Knepley PetscFE fe; 3993113607cSMatthew G. Knepley PetscDualSpace sp; 4003113607cSMatthew G. Knepley PetscInt Ncf; 4013113607cSMatthew G. Knepley 4022764a2aaSMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, f, (PetscObject *) &fe);CHKERRQ(ierr); 4033113607cSMatthew G. Knepley ierr = PetscFEGetDualSpace(fe, &sp);CHKERRQ(ierr); 4043113607cSMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Ncf);CHKERRQ(ierr); 4053113607cSMatthew G. Knepley ierr = PetscDualSpaceGetDimension(sp, &spDim);CHKERRQ(ierr); 4060f2d7e86SMatthew G. Knepley for (d = 0; d < spDim; ++d) { 4070f2d7e86SMatthew G. Knepley PetscQuadrature quad; 4080f2d7e86SMatthew G. Knepley const PetscReal *points, *weights; 4090f2d7e86SMatthew G. Knepley PetscInt numPoints, q; 4100f2d7e86SMatthew G. Knepley 4110f2d7e86SMatthew G. Knepley if (funcs[f]) { 4123113607cSMatthew G. Knepley ierr = PetscDualSpaceGetFunctional(sp, d, &quad);CHKERRQ(ierr); 4130f2d7e86SMatthew G. Knepley ierr = PetscQuadratureGetData(quad, NULL, &numPoints, &points, &weights);CHKERRQ(ierr); 4143113607cSMatthew G. Knepley ierr = PetscFEGetTabulation(fe, numPoints, points, &basisField[f], &basisFieldDer[f], NULL);CHKERRQ(ierr); 4150f2d7e86SMatthew G. Knepley for (q = 0; q < numPoints; ++q) { 4160f2d7e86SMatthew G. Knepley CoordinatesRefToReal(dim, dim, v0, J, &points[q*dim], x); 417326413afSMatthew G. Knepley ierr = EvaluateFieldJets(prob, PETSC_FALSE, q, invJ, coefficients, NULL, u, u_x, NULL);CHKERRQ(ierr); 418326413afSMatthew G. Knepley ierr = EvaluateFieldJets(probAux, PETSC_FALSE, q, invJ, coefficientsAux, NULL, a, a_x, NULL);CHKERRQ(ierr); 4193bc3b0a0SMatthew G. Knepley (*funcs[f])(u, NULL, u_x, a, NULL, a_x, x, &values[v]); 4200f2d7e86SMatthew G. Knepley } 4213113607cSMatthew G. Knepley ierr = PetscFERestoreTabulation(fe, numPoints, points, &basisField[f], &basisFieldDer[f], NULL);CHKERRQ(ierr); 4220f2d7e86SMatthew G. Knepley } else { 4230f2d7e86SMatthew G. Knepley for (comp = 0; comp < Ncf; ++comp) values[v+comp] = 0.0; 4240f2d7e86SMatthew G. Knepley } 4250f2d7e86SMatthew G. Knepley v += Ncf; 4260f2d7e86SMatthew G. Knepley } 4270f2d7e86SMatthew G. Knepley } 428326413afSMatthew G. Knepley ierr = DMPlexVecRestoreClosure(dm, section, localU, c, NULL, &coefficients);CHKERRQ(ierr); 429326413afSMatthew G. Knepley if (dmAux) {ierr = DMPlexVecRestoreClosure(dmAux, sectionAux, A, c, NULL, &coefficientsAux);CHKERRQ(ierr);} 4300f2d7e86SMatthew G. Knepley ierr = DMPlexVecSetClosure(dm, section, localX, c, values, mode);CHKERRQ(ierr); 4310f2d7e86SMatthew G. Knepley } 4320f2d7e86SMatthew G. Knepley ierr = DMRestoreWorkArray(dm, numValues, PETSC_SCALAR, &values);CHKERRQ(ierr); 4330f2d7e86SMatthew G. Knepley ierr = PetscFree3(v0,J,invJ);CHKERRQ(ierr); 4340f2d7e86SMatthew G. Knepley PetscFunctionReturn(0); 4350f2d7e86SMatthew G. Knepley } 4360f2d7e86SMatthew G. Knepley 4370f2d7e86SMatthew G. Knepley #undef __FUNCT__ 4380f2d7e86SMatthew G. Knepley #define __FUNCT__ "DMPlexProjectField" 4390f2d7e86SMatthew G. Knepley /*@C 4400f2d7e86SMatthew G. Knepley DMPlexProjectField - This projects the given function of the fields into the function space provided. 4410f2d7e86SMatthew G. Knepley 4420f2d7e86SMatthew G. Knepley Input Parameters: 4430f2d7e86SMatthew G. Knepley + dm - The DM 4440f2d7e86SMatthew G. Knepley . U - The input field vector 4450f2d7e86SMatthew G. Knepley . funcs - The functions to evaluate, one per field 4460f2d7e86SMatthew G. Knepley - mode - The insertion mode for values 4470f2d7e86SMatthew G. Knepley 4480f2d7e86SMatthew G. Knepley Output Parameter: 4490f2d7e86SMatthew G. Knepley . X - The output vector 4500f2d7e86SMatthew G. Knepley 4510f2d7e86SMatthew G. Knepley Level: developer 4520f2d7e86SMatthew G. Knepley 4530f2d7e86SMatthew G. Knepley .seealso: DMPlexProjectFunction(), DMPlexComputeL2Diff() 4540f2d7e86SMatthew G. Knepley @*/ 4553bc3b0a0SMatthew G. Knepley PetscErrorCode DMPlexProjectField(DM dm, Vec U, void (**funcs)(const PetscScalar[], const PetscScalar[], const PetscScalar[], const PetscScalar[], const PetscScalar[], const PetscScalar[], const PetscReal [], PetscScalar []), InsertMode mode, Vec X) 4560f2d7e86SMatthew G. Knepley { 4570f2d7e86SMatthew G. Knepley Vec localX, localU; 4580f2d7e86SMatthew G. Knepley PetscErrorCode ierr; 4590f2d7e86SMatthew G. Knepley 4600f2d7e86SMatthew G. Knepley PetscFunctionBegin; 4610f2d7e86SMatthew G. Knepley PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 4620f2d7e86SMatthew G. Knepley ierr = DMGetLocalVector(dm, &localX);CHKERRQ(ierr); 4630f2d7e86SMatthew G. Knepley ierr = DMGetLocalVector(dm, &localU);CHKERRQ(ierr); 4640f2d7e86SMatthew G. Knepley ierr = DMGlobalToLocalBegin(dm, U, INSERT_VALUES, localU);CHKERRQ(ierr); 4650f2d7e86SMatthew G. Knepley ierr = DMGlobalToLocalEnd(dm, U, INSERT_VALUES, localU);CHKERRQ(ierr); 4663113607cSMatthew G. Knepley ierr = DMPlexProjectFieldLocal(dm, localU, funcs, mode, localX);CHKERRQ(ierr); 4670f2d7e86SMatthew G. Knepley ierr = DMLocalToGlobalBegin(dm, localX, mode, X);CHKERRQ(ierr); 4680f2d7e86SMatthew G. Knepley ierr = DMLocalToGlobalEnd(dm, localX, mode, X);CHKERRQ(ierr); 4690f2d7e86SMatthew G. Knepley ierr = DMRestoreLocalVector(dm, &localX);CHKERRQ(ierr); 4700f2d7e86SMatthew G. Knepley ierr = DMRestoreLocalVector(dm, &localU);CHKERRQ(ierr); 4710f2d7e86SMatthew G. Knepley PetscFunctionReturn(0); 4720f2d7e86SMatthew G. Knepley } 4730f2d7e86SMatthew G. Knepley 4740f2d7e86SMatthew G. Knepley #undef __FUNCT__ 4753351dd3dSMatthew G. Knepley #define __FUNCT__ "DMPlexInsertBoundaryValuesFEM" 4763351dd3dSMatthew G. Knepley PetscErrorCode DMPlexInsertBoundaryValuesFEM(DM dm, Vec localX) 47755f2e967SMatthew G. Knepley { 47855f2e967SMatthew G. Knepley void (**funcs)(const PetscReal x[], PetscScalar *u, void *ctx); 47955f2e967SMatthew G. Knepley void **ctxs; 48055f2e967SMatthew G. Knepley PetscFE *fe; 48155f2e967SMatthew G. Knepley PetscInt numFields, f, numBd, b; 48255f2e967SMatthew G. Knepley PetscErrorCode ierr; 48355f2e967SMatthew G. Knepley 48455f2e967SMatthew G. Knepley PetscFunctionBegin; 48555f2e967SMatthew G. Knepley PetscValidHeaderSpecific(dm, DM_CLASSID, 1); 48655f2e967SMatthew G. Knepley PetscValidHeaderSpecific(localX, VEC_CLASSID, 2); 48755f2e967SMatthew G. Knepley ierr = DMGetNumFields(dm, &numFields);CHKERRQ(ierr); 48855f2e967SMatthew G. Knepley ierr = PetscMalloc3(numFields,&fe,numFields,&funcs,numFields,&ctxs);CHKERRQ(ierr); 48955f2e967SMatthew G. Knepley for (f = 0; f < numFields; ++f) {ierr = DMGetField(dm, f, (PetscObject *) &fe[f]);CHKERRQ(ierr);} 49055f2e967SMatthew G. Knepley /* OPT: Could attempt to do multiple BCs at once */ 49155f2e967SMatthew G. Knepley ierr = DMPlexGetNumBoundary(dm, &numBd);CHKERRQ(ierr); 49255f2e967SMatthew G. Knepley for (b = 0; b < numBd; ++b) { 493a18a7fb9SMatthew G. Knepley DMLabel label; 49455f2e967SMatthew G. Knepley const PetscInt *ids; 49563d5297fSMatthew G. Knepley const char *labelname; 49655f2e967SMatthew G. Knepley PetscInt numids, field; 49755f2e967SMatthew G. Knepley PetscBool isEssential; 49855f2e967SMatthew G. Knepley void (*func)(); 49955f2e967SMatthew G. Knepley void *ctx; 50055f2e967SMatthew G. Knepley 50163d5297fSMatthew G. Knepley ierr = DMPlexGetBoundary(dm, b, &isEssential, NULL, &labelname, &field, &func, &numids, &ids, &ctx);CHKERRQ(ierr); 50263d5297fSMatthew G. Knepley ierr = DMPlexGetLabel(dm, labelname, &label);CHKERRQ(ierr); 50355f2e967SMatthew G. Knepley for (f = 0; f < numFields; ++f) { 50455f2e967SMatthew G. Knepley funcs[f] = field == f ? (void (*)(const PetscReal[], PetscScalar *, void *)) func : NULL; 50555f2e967SMatthew G. Knepley ctxs[f] = field == f ? ctx : NULL; 50655f2e967SMatthew G. Knepley } 507a18a7fb9SMatthew G. Knepley ierr = DMPlexProjectFunctionLabelLocal(dm, label, numids, ids, fe, funcs, ctxs, INSERT_BC_VALUES, localX);CHKERRQ(ierr); 50855f2e967SMatthew G. Knepley } 50955f2e967SMatthew G. Knepley ierr = PetscFree3(fe,funcs,ctxs);CHKERRQ(ierr); 51055f2e967SMatthew G. Knepley PetscFunctionReturn(0); 51155f2e967SMatthew G. Knepley } 51255f2e967SMatthew G. Knepley 513cb1e1211SMatthew G Knepley #undef __FUNCT__ 514cb1e1211SMatthew G Knepley #define __FUNCT__ "DMPlexComputeL2Diff" 515cb1e1211SMatthew G Knepley /*@C 516cb1e1211SMatthew G Knepley DMPlexComputeL2Diff - This function computes the L_2 difference between a function u and an FEM interpolant solution u_h. 517cb1e1211SMatthew G Knepley 518cb1e1211SMatthew G Knepley Input Parameters: 519cb1e1211SMatthew G Knepley + dm - The DM 520cb1e1211SMatthew G Knepley . funcs - The functions to evaluate for each field component 52151259fa3SMatthew G. Knepley . ctxs - Optional array of contexts to pass to each function, or NULL. 522cb1e1211SMatthew G Knepley - X - The coefficient vector u_h 523cb1e1211SMatthew G Knepley 524cb1e1211SMatthew G Knepley Output Parameter: 525cb1e1211SMatthew G Knepley . diff - The diff ||u - u_h||_2 526cb1e1211SMatthew G Knepley 527cb1e1211SMatthew G Knepley Level: developer 528cb1e1211SMatthew G Knepley 52915496722SMatthew G. Knepley .seealso: DMPlexProjectFunction(), DMPlexComputeL2FieldDiff(), DMPlexComputeL2GradientDiff() 530878cb397SSatish Balay @*/ 5310f2d7e86SMatthew G. Knepley PetscErrorCode DMPlexComputeL2Diff(DM dm, void (**funcs)(const PetscReal [], PetscScalar *, void *), void **ctxs, Vec X, PetscReal *diff) 532cb1e1211SMatthew G Knepley { 533cb1e1211SMatthew G Knepley const PetscInt debug = 0; 534cb1e1211SMatthew G Knepley PetscSection section; 535c5bbbd5bSMatthew G. Knepley PetscQuadrature quad; 536cb1e1211SMatthew G Knepley Vec localX; 53715496722SMatthew G. Knepley PetscScalar *funcVal, *interpolant; 538cb1e1211SMatthew G Knepley PetscReal *coords, *v0, *J, *invJ, detJ; 539cb1e1211SMatthew G Knepley PetscReal localDiff = 0.0; 54015496722SMatthew G. Knepley const PetscReal *quadPoints, *quadWeights; 54115496722SMatthew G. Knepley PetscInt dim, numFields, numComponents = 0, numQuadPoints, cStart, cEnd, c, field, fieldOffset; 542cb1e1211SMatthew G Knepley PetscErrorCode ierr; 543cb1e1211SMatthew G Knepley 544cb1e1211SMatthew G Knepley PetscFunctionBegin; 545c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 546cb1e1211SMatthew G Knepley ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr); 547cb1e1211SMatthew G Knepley ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr); 548cb1e1211SMatthew G Knepley ierr = DMGetLocalVector(dm, &localX);CHKERRQ(ierr); 549cb1e1211SMatthew G Knepley ierr = DMGlobalToLocalBegin(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 550cb1e1211SMatthew G Knepley ierr = DMGlobalToLocalEnd(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 551cb1e1211SMatthew G Knepley for (field = 0; field < numFields; ++field) { 55215496722SMatthew G. Knepley PetscObject obj; 55315496722SMatthew G. Knepley PetscClassId id; 554c5bbbd5bSMatthew G. Knepley PetscInt Nc; 555c5bbbd5bSMatthew G. Knepley 55615496722SMatthew G. Knepley ierr = DMGetField(dm, field, &obj);CHKERRQ(ierr); 55715496722SMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 55815496722SMatthew G. Knepley if (id == PETSCFE_CLASSID) { 55915496722SMatthew G. Knepley PetscFE fe = (PetscFE) obj; 56015496722SMatthew G. Knepley 5610f2d7e86SMatthew G. Knepley ierr = PetscFEGetQuadrature(fe, &quad);CHKERRQ(ierr); 5620f2d7e86SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Nc);CHKERRQ(ierr); 56315496722SMatthew G. Knepley } else if (id == PETSCFV_CLASSID) { 56415496722SMatthew G. Knepley PetscFV fv = (PetscFV) obj; 56515496722SMatthew G. Knepley 56615496722SMatthew G. Knepley ierr = PetscFVGetQuadrature(fv, &quad);CHKERRQ(ierr); 56715496722SMatthew G. Knepley ierr = PetscFVGetNumComponents(fv, &Nc);CHKERRQ(ierr); 56815496722SMatthew G. Knepley } else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", field); 569c5bbbd5bSMatthew G. Knepley numComponents += Nc; 570cb1e1211SMatthew G Knepley } 57115496722SMatthew G. Knepley ierr = PetscQuadratureGetData(quad, NULL, &numQuadPoints, &quadPoints, &quadWeights);CHKERRQ(ierr); 5720f2d7e86SMatthew G. Knepley ierr = DMPlexProjectFunctionLocal(dm, funcs, ctxs, INSERT_BC_VALUES, localX);CHKERRQ(ierr); 57315496722SMatthew G. Knepley ierr = PetscMalloc6(numComponents,&funcVal,numComponents,&interpolant,dim,&coords,dim,&v0,dim*dim,&J,dim*dim,&invJ);CHKERRQ(ierr); 574cb1e1211SMatthew G Knepley ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr); 575cb1e1211SMatthew G Knepley for (c = cStart; c < cEnd; ++c) { 576a1e44745SMatthew G. Knepley PetscScalar *x = NULL; 577cb1e1211SMatthew G Knepley PetscReal elemDiff = 0.0; 578cb1e1211SMatthew G Knepley 5798e0841e0SMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dm, c, NULL, v0, J, invJ, &detJ);CHKERRQ(ierr); 580cb1e1211SMatthew G Knepley if (detJ <= 0.0) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Invalid determinant %g for element %d", detJ, c); 581cb1e1211SMatthew G Knepley ierr = DMPlexVecGetClosure(dm, NULL, localX, c, NULL, &x);CHKERRQ(ierr); 582cb1e1211SMatthew G Knepley 58315496722SMatthew G. Knepley for (field = 0, fieldOffset = 0; field < numFields; ++field) { 58415496722SMatthew G. Knepley PetscObject obj; 58515496722SMatthew G. Knepley PetscClassId id; 586c110b1eeSGeoffrey Irving void * const ctx = ctxs ? ctxs[field] : NULL; 58715496722SMatthew G. Knepley PetscInt Nb, Nc, q, fc; 588cb1e1211SMatthew G Knepley 58915496722SMatthew G. Knepley ierr = DMGetField(dm, field, &obj);CHKERRQ(ierr); 59015496722SMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 59115496722SMatthew G. Knepley if (id == PETSCFE_CLASSID) {ierr = PetscFEGetNumComponents((PetscFE) obj, &Nc);CHKERRQ(ierr);ierr = PetscFEGetDimension((PetscFE) obj, &Nb);CHKERRQ(ierr);} 59215496722SMatthew G. Knepley else if (id == PETSCFV_CLASSID) {ierr = PetscFVGetNumComponents((PetscFV) obj, &Nc);CHKERRQ(ierr);Nb = 1;} 59315496722SMatthew G. Knepley else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", field); 594cb1e1211SMatthew G Knepley if (debug) { 595cb1e1211SMatthew G Knepley char title[1024]; 596cb1e1211SMatthew G Knepley ierr = PetscSNPrintf(title, 1023, "Solution for Field %d", field);CHKERRQ(ierr); 59715496722SMatthew G. Knepley ierr = DMPrintCellVector(c, title, Nb*Nc, &x[fieldOffset]);CHKERRQ(ierr); 598cb1e1211SMatthew G Knepley } 599cb1e1211SMatthew G Knepley for (q = 0; q < numQuadPoints; ++q) { 60015496722SMatthew G. Knepley CoordinatesRefToReal(dim, dim, v0, J, &quadPoints[q*dim], coords); 601c110b1eeSGeoffrey Irving (*funcs[field])(coords, funcVal, ctx); 60215496722SMatthew G. Knepley if (id == PETSCFE_CLASSID) {ierr = PetscFEInterpolate_Static((PetscFE) obj, &x[fieldOffset], q, interpolant);CHKERRQ(ierr);} 60315496722SMatthew G. Knepley else if (id == PETSCFV_CLASSID) {ierr = PetscFVInterpolate_Static((PetscFV) obj, &x[fieldOffset], q, interpolant);CHKERRQ(ierr);} 60415496722SMatthew G. Knepley else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", field); 60515496722SMatthew G. Knepley for (fc = 0; fc < Nc; ++fc) { 60615496722SMatthew G. Knepley if (debug) {ierr = PetscPrintf(PETSC_COMM_SELF, " elem %d field %d diff %g\n", c, field, PetscSqr(PetscRealPart(interpolant[fc] - funcVal[fc]))*quadWeights[q]*detJ);CHKERRQ(ierr);} 60715496722SMatthew G. Knepley elemDiff += PetscSqr(PetscRealPart(interpolant[fc] - funcVal[fc]))*quadWeights[q]*detJ; 608cb1e1211SMatthew G Knepley } 609cb1e1211SMatthew G Knepley } 61015496722SMatthew G. Knepley fieldOffset += Nb*Nc; 611cb1e1211SMatthew G Knepley } 612cb1e1211SMatthew G Knepley ierr = DMPlexVecRestoreClosure(dm, NULL, localX, c, NULL, &x);CHKERRQ(ierr); 613cb1e1211SMatthew G Knepley if (debug) {ierr = PetscPrintf(PETSC_COMM_SELF, " elem %d diff %g\n", c, elemDiff);CHKERRQ(ierr);} 614cb1e1211SMatthew G Knepley localDiff += elemDiff; 615cb1e1211SMatthew G Knepley } 61615496722SMatthew G. Knepley ierr = PetscFree6(funcVal,interpolant,coords,v0,J,invJ);CHKERRQ(ierr); 617cb1e1211SMatthew G Knepley ierr = DMRestoreLocalVector(dm, &localX);CHKERRQ(ierr); 61886a74ee0SMatthew G. Knepley ierr = MPI_Allreduce(&localDiff, diff, 1, MPIU_REAL, MPI_SUM, PetscObjectComm((PetscObject)dm));CHKERRQ(ierr); 619cb1e1211SMatthew G Knepley *diff = PetscSqrtReal(*diff); 620cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 621cb1e1211SMatthew G Knepley } 622cb1e1211SMatthew G Knepley 623cb1e1211SMatthew G Knepley #undef __FUNCT__ 62440e14135SMatthew G. Knepley #define __FUNCT__ "DMPlexComputeL2GradientDiff" 62540e14135SMatthew G. Knepley /*@C 62640e14135SMatthew G. Knepley DMPlexComputeL2GradientDiff - This function computes the L_2 difference between the gradient of a function u and an FEM interpolant solution grad u_h. 62740e14135SMatthew G. Knepley 62840e14135SMatthew G. Knepley Input Parameters: 62940e14135SMatthew G. Knepley + dm - The DM 63040e14135SMatthew G. Knepley . funcs - The gradient functions to evaluate for each field component 63151259fa3SMatthew G. Knepley . ctxs - Optional array of contexts to pass to each function, or NULL. 63240e14135SMatthew G. Knepley . X - The coefficient vector u_h 63340e14135SMatthew G. Knepley - n - The vector to project along 63440e14135SMatthew G. Knepley 63540e14135SMatthew G. Knepley Output Parameter: 63640e14135SMatthew G. Knepley . diff - The diff ||(grad u - grad u_h) . n||_2 63740e14135SMatthew G. Knepley 63840e14135SMatthew G. Knepley Level: developer 63940e14135SMatthew G. Knepley 64040e14135SMatthew G. Knepley .seealso: DMPlexProjectFunction(), DMPlexComputeL2Diff() 64140e14135SMatthew G. Knepley @*/ 6420f2d7e86SMatthew G. Knepley PetscErrorCode DMPlexComputeL2GradientDiff(DM dm, void (**funcs)(const PetscReal [], const PetscReal [], PetscScalar *, void *), void **ctxs, Vec X, const PetscReal n[], PetscReal *diff) 643cb1e1211SMatthew G Knepley { 64440e14135SMatthew G. Knepley const PetscInt debug = 0; 645cb1e1211SMatthew G Knepley PetscSection section; 64640e14135SMatthew G. Knepley PetscQuadrature quad; 64740e14135SMatthew G. Knepley Vec localX; 64840e14135SMatthew G. Knepley PetscScalar *funcVal, *interpolantVec; 64940e14135SMatthew G. Knepley PetscReal *coords, *realSpaceDer, *v0, *J, *invJ, detJ; 65040e14135SMatthew G. Knepley PetscReal localDiff = 0.0; 65140e14135SMatthew G. Knepley PetscInt dim, numFields, numComponents = 0, cStart, cEnd, c, field, fieldOffset, comp; 652cb1e1211SMatthew G Knepley PetscErrorCode ierr; 653cb1e1211SMatthew G Knepley 654cb1e1211SMatthew G Knepley PetscFunctionBegin; 655c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 65640e14135SMatthew G. Knepley ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr); 65740e14135SMatthew G. Knepley ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr); 65840e14135SMatthew G. Knepley ierr = DMGetLocalVector(dm, &localX);CHKERRQ(ierr); 65940e14135SMatthew G. Knepley ierr = DMGlobalToLocalBegin(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 66040e14135SMatthew G. Knepley ierr = DMGlobalToLocalEnd(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 661652b88e8SMatthew G. Knepley for (field = 0; field < numFields; ++field) { 6620f2d7e86SMatthew G. Knepley PetscFE fe; 66340e14135SMatthew G. Knepley PetscInt Nc; 664652b88e8SMatthew G. Knepley 6650f2d7e86SMatthew G. Knepley ierr = DMGetField(dm, field, (PetscObject *) &fe);CHKERRQ(ierr); 6660f2d7e86SMatthew G. Knepley ierr = PetscFEGetQuadrature(fe, &quad);CHKERRQ(ierr); 6670f2d7e86SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Nc);CHKERRQ(ierr); 66840e14135SMatthew G. Knepley numComponents += Nc; 669652b88e8SMatthew G. Knepley } 67040e14135SMatthew G. Knepley /* ierr = DMPlexProjectFunctionLocal(dm, fe, funcs, INSERT_BC_VALUES, localX);CHKERRQ(ierr); */ 67140e14135SMatthew G. Knepley ierr = PetscMalloc7(numComponents,&funcVal,dim,&coords,dim,&realSpaceDer,dim,&v0,dim*dim,&J,dim*dim,&invJ,dim,&interpolantVec);CHKERRQ(ierr); 67240e14135SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr); 67340e14135SMatthew G. Knepley for (c = cStart; c < cEnd; ++c) { 67440e14135SMatthew G. Knepley PetscScalar *x = NULL; 67540e14135SMatthew G. Knepley PetscReal elemDiff = 0.0; 676652b88e8SMatthew G. Knepley 6778e0841e0SMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dm, c, NULL, v0, J, invJ, &detJ);CHKERRQ(ierr); 67840e14135SMatthew G. Knepley if (detJ <= 0.0) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Invalid determinant %g for element %d", detJ, c); 67940e14135SMatthew G. Knepley ierr = DMPlexVecGetClosure(dm, NULL, localX, c, NULL, &x);CHKERRQ(ierr); 68040e14135SMatthew G. Knepley 68140e14135SMatthew G. Knepley for (field = 0, comp = 0, fieldOffset = 0; field < numFields; ++field) { 6820f2d7e86SMatthew G. Knepley PetscFE fe; 68351259fa3SMatthew G. Knepley void * const ctx = ctxs ? ctxs[field] : NULL; 68421454ff5SMatthew G. Knepley const PetscReal *quadPoints, *quadWeights; 68540e14135SMatthew G. Knepley PetscReal *basisDer; 68621454ff5SMatthew G. Knepley PetscInt numQuadPoints, Nb, Ncomp, q, d, e, fc, f, g; 68740e14135SMatthew G. Knepley 6880f2d7e86SMatthew G. Knepley ierr = DMGetField(dm, field, (PetscObject *) &fe);CHKERRQ(ierr); 68921454ff5SMatthew G. Knepley ierr = PetscQuadratureGetData(quad, NULL, &numQuadPoints, &quadPoints, &quadWeights);CHKERRQ(ierr); 6900f2d7e86SMatthew G. Knepley ierr = PetscFEGetDimension(fe, &Nb);CHKERRQ(ierr); 6910f2d7e86SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Ncomp);CHKERRQ(ierr); 6920f2d7e86SMatthew G. Knepley ierr = PetscFEGetDefaultTabulation(fe, NULL, &basisDer, NULL);CHKERRQ(ierr); 69340e14135SMatthew G. Knepley if (debug) { 69440e14135SMatthew G. Knepley char title[1024]; 69540e14135SMatthew G. Knepley ierr = PetscSNPrintf(title, 1023, "Solution for Field %d", field);CHKERRQ(ierr); 69640e14135SMatthew G. Knepley ierr = DMPrintCellVector(c, title, Nb*Ncomp, &x[fieldOffset]);CHKERRQ(ierr); 697652b88e8SMatthew G. Knepley } 69840e14135SMatthew G. Knepley for (q = 0; q < numQuadPoints; ++q) { 69940e14135SMatthew G. Knepley for (d = 0; d < dim; d++) { 70040e14135SMatthew G. Knepley coords[d] = v0[d]; 70140e14135SMatthew G. Knepley for (e = 0; e < dim; e++) { 70240e14135SMatthew G. Knepley coords[d] += J[d*dim+e]*(quadPoints[q*dim+e] + 1.0); 703652b88e8SMatthew G. Knepley } 70440e14135SMatthew G. Knepley } 70551259fa3SMatthew G. Knepley (*funcs[field])(coords, n, funcVal, ctx); 70640e14135SMatthew G. Knepley for (fc = 0; fc < Ncomp; ++fc) { 70740e14135SMatthew G. Knepley PetscScalar interpolant = 0.0; 70840e14135SMatthew G. Knepley 70940e14135SMatthew G. Knepley for (d = 0; d < dim; ++d) interpolantVec[d] = 0.0; 71040e14135SMatthew G. Knepley for (f = 0; f < Nb; ++f) { 71140e14135SMatthew G. Knepley const PetscInt fidx = f*Ncomp+fc; 71240e14135SMatthew G. Knepley 71340e14135SMatthew G. Knepley for (d = 0; d < dim; ++d) { 71440e14135SMatthew G. Knepley realSpaceDer[d] = 0.0; 71540e14135SMatthew G. Knepley for (g = 0; g < dim; ++g) { 71640e14135SMatthew G. Knepley realSpaceDer[d] += invJ[g*dim+d]*basisDer[(q*Nb*Ncomp+fidx)*dim+g]; 71740e14135SMatthew G. Knepley } 71840e14135SMatthew G. Knepley interpolantVec[d] += x[fieldOffset+fidx]*realSpaceDer[d]; 71940e14135SMatthew G. Knepley } 72040e14135SMatthew G. Knepley } 72140e14135SMatthew G. Knepley for (d = 0; d < dim; ++d) interpolant += interpolantVec[d]*n[d]; 72240e14135SMatthew G. Knepley if (debug) {ierr = PetscPrintf(PETSC_COMM_SELF, " elem %d fieldDer %d diff %g\n", c, field, PetscSqr(PetscRealPart(interpolant - funcVal[fc]))*quadWeights[q]*detJ);CHKERRQ(ierr);} 72340e14135SMatthew G. Knepley elemDiff += PetscSqr(PetscRealPart(interpolant - funcVal[fc]))*quadWeights[q]*detJ; 72440e14135SMatthew G. Knepley } 72540e14135SMatthew G. Knepley } 72640e14135SMatthew G. Knepley comp += Ncomp; 72740e14135SMatthew G. Knepley fieldOffset += Nb*Ncomp; 72840e14135SMatthew G. Knepley } 72940e14135SMatthew G. Knepley ierr = DMPlexVecRestoreClosure(dm, NULL, localX, c, NULL, &x);CHKERRQ(ierr); 73040e14135SMatthew G. Knepley if (debug) {ierr = PetscPrintf(PETSC_COMM_SELF, " elem %d diff %g\n", c, elemDiff);CHKERRQ(ierr);} 73140e14135SMatthew G. Knepley localDiff += elemDiff; 73240e14135SMatthew G. Knepley } 73340e14135SMatthew G. Knepley ierr = PetscFree7(funcVal,coords,realSpaceDer,v0,J,invJ,interpolantVec);CHKERRQ(ierr); 73440e14135SMatthew G. Knepley ierr = DMRestoreLocalVector(dm, &localX);CHKERRQ(ierr); 73540e14135SMatthew G. Knepley ierr = MPI_Allreduce(&localDiff, diff, 1, MPIU_REAL, MPI_SUM, PetscObjectComm((PetscObject)dm));CHKERRQ(ierr); 73640e14135SMatthew G. Knepley *diff = PetscSqrtReal(*diff); 737cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 738cb1e1211SMatthew G Knepley } 739cb1e1211SMatthew G Knepley 740a0845e3aSMatthew G. Knepley #undef __FUNCT__ 74173d901b8SMatthew G. Knepley #define __FUNCT__ "DMPlexComputeL2FieldDiff" 74215496722SMatthew G. Knepley /*@C 74315496722SMatthew G. Knepley DMPlexComputeL2FieldDiff - This function computes the L_2 difference between a function u and an FEM interpolant solution u_h, separated into field components. 74415496722SMatthew G. Knepley 74515496722SMatthew G. Knepley Input Parameters: 74615496722SMatthew G. Knepley + dm - The DM 74715496722SMatthew G. Knepley . funcs - The functions to evaluate for each field component 74815496722SMatthew G. Knepley . ctxs - Optional array of contexts to pass to each function, or NULL. 74915496722SMatthew G. Knepley - X - The coefficient vector u_h 75015496722SMatthew G. Knepley 75115496722SMatthew G. Knepley Output Parameter: 75215496722SMatthew G. Knepley . diff - The array of differences, ||u^f - u^f_h||_2 75315496722SMatthew G. Knepley 75415496722SMatthew G. Knepley Level: developer 75515496722SMatthew G. Knepley 75615496722SMatthew G. Knepley .seealso: DMPlexProjectFunction(), DMPlexComputeL2Diff(), DMPlexComputeL2GradientDiff() 75715496722SMatthew G. Knepley @*/ 7580f2d7e86SMatthew G. Knepley PetscErrorCode DMPlexComputeL2FieldDiff(DM dm, void (**funcs)(const PetscReal [], PetscScalar *, void *), void **ctxs, Vec X, PetscReal diff[]) 75973d901b8SMatthew G. Knepley { 76073d901b8SMatthew G. Knepley const PetscInt debug = 0; 76173d901b8SMatthew G. Knepley PetscSection section; 76273d901b8SMatthew G. Knepley PetscQuadrature quad; 76373d901b8SMatthew G. Knepley Vec localX; 76415496722SMatthew G. Knepley PetscScalar *funcVal, *interpolant; 76573d901b8SMatthew G. Knepley PetscReal *coords, *v0, *J, *invJ, detJ; 76673d901b8SMatthew G. Knepley PetscReal *localDiff; 76715496722SMatthew G. Knepley const PetscReal *quadPoints, *quadWeights; 76815496722SMatthew G. Knepley PetscInt dim, numFields, numComponents = 0, numQuadPoints, cStart, cEnd, c, field, fieldOffset; 76973d901b8SMatthew G. Knepley PetscErrorCode ierr; 77073d901b8SMatthew G. Knepley 77173d901b8SMatthew G. Knepley PetscFunctionBegin; 772c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 77373d901b8SMatthew G. Knepley ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr); 77473d901b8SMatthew G. Knepley ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr); 77573d901b8SMatthew G. Knepley ierr = DMGetLocalVector(dm, &localX);CHKERRQ(ierr); 77673d901b8SMatthew G. Knepley ierr = DMGlobalToLocalBegin(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 77773d901b8SMatthew G. Knepley ierr = DMGlobalToLocalEnd(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 77873d901b8SMatthew G. Knepley for (field = 0; field < numFields; ++field) { 77915496722SMatthew G. Knepley PetscObject obj; 78015496722SMatthew G. Knepley PetscClassId id; 78173d901b8SMatthew G. Knepley PetscInt Nc; 78273d901b8SMatthew G. Knepley 78315496722SMatthew G. Knepley ierr = DMGetField(dm, field, &obj);CHKERRQ(ierr); 78415496722SMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 78515496722SMatthew G. Knepley if (id == PETSCFE_CLASSID) { 78615496722SMatthew G. Knepley PetscFE fe = (PetscFE) obj; 78715496722SMatthew G. Knepley 7880f2d7e86SMatthew G. Knepley ierr = PetscFEGetQuadrature(fe, &quad);CHKERRQ(ierr); 7890f2d7e86SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Nc);CHKERRQ(ierr); 79015496722SMatthew G. Knepley } else if (id == PETSCFV_CLASSID) { 79115496722SMatthew G. Knepley PetscFV fv = (PetscFV) obj; 79215496722SMatthew G. Knepley 79315496722SMatthew G. Knepley ierr = PetscFVGetQuadrature(fv, &quad);CHKERRQ(ierr); 79415496722SMatthew G. Knepley ierr = PetscFVGetNumComponents(fv, &Nc);CHKERRQ(ierr); 79515496722SMatthew G. Knepley } else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", field); 79673d901b8SMatthew G. Knepley numComponents += Nc; 79773d901b8SMatthew G. Knepley } 79815496722SMatthew G. Knepley ierr = PetscQuadratureGetData(quad, NULL, &numQuadPoints, &quadPoints, &quadWeights);CHKERRQ(ierr); 7990f2d7e86SMatthew G. Knepley ierr = DMPlexProjectFunctionLocal(dm, funcs, ctxs, INSERT_BC_VALUES, localX);CHKERRQ(ierr); 80015496722SMatthew G. Knepley ierr = PetscCalloc7(numFields,&localDiff,numComponents,&funcVal,numComponents,&interpolant,dim,&coords,dim,&v0,dim*dim,&J,dim*dim,&invJ);CHKERRQ(ierr); 80173d901b8SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr); 80273d901b8SMatthew G. Knepley for (c = cStart; c < cEnd; ++c) { 80373d901b8SMatthew G. Knepley PetscScalar *x = NULL; 80473d901b8SMatthew G. Knepley 8058e0841e0SMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dm, c, NULL, v0, J, invJ, &detJ);CHKERRQ(ierr); 80673d901b8SMatthew G. Knepley if (detJ <= 0.0) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Invalid determinant %g for element %d", detJ, c); 80773d901b8SMatthew G. Knepley ierr = DMPlexVecGetClosure(dm, NULL, localX, c, NULL, &x);CHKERRQ(ierr); 80873d901b8SMatthew G. Knepley 80915496722SMatthew G. Knepley for (field = 0, fieldOffset = 0; field < numFields; ++field) { 81015496722SMatthew G. Knepley PetscObject obj; 81115496722SMatthew G. Knepley PetscClassId id; 81273d901b8SMatthew G. Knepley void * const ctx = ctxs ? ctxs[field] : NULL; 81315496722SMatthew G. Knepley PetscInt Nb, Nc, q, fc; 81473d901b8SMatthew G. Knepley 81515496722SMatthew G. Knepley PetscReal elemDiff = 0.0; 81615496722SMatthew G. Knepley 81715496722SMatthew G. Knepley ierr = DMGetField(dm, field, &obj);CHKERRQ(ierr); 81815496722SMatthew G. Knepley ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr); 81915496722SMatthew G. Knepley if (id == PETSCFE_CLASSID) {ierr = PetscFEGetNumComponents((PetscFE) obj, &Nc);CHKERRQ(ierr);ierr = PetscFEGetDimension((PetscFE) obj, &Nb);CHKERRQ(ierr);} 82015496722SMatthew G. Knepley else if (id == PETSCFV_CLASSID) {ierr = PetscFVGetNumComponents((PetscFV) obj, &Nc);CHKERRQ(ierr);Nb = 1;} 82115496722SMatthew G. Knepley else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", field); 82273d901b8SMatthew G. Knepley if (debug) { 82373d901b8SMatthew G. Knepley char title[1024]; 82473d901b8SMatthew G. Knepley ierr = PetscSNPrintf(title, 1023, "Solution for Field %d", field);CHKERRQ(ierr); 82515496722SMatthew G. Knepley ierr = DMPrintCellVector(c, title, Nb*Nc, &x[fieldOffset]);CHKERRQ(ierr); 82673d901b8SMatthew G. Knepley } 82773d901b8SMatthew G. Knepley for (q = 0; q < numQuadPoints; ++q) { 82815496722SMatthew G. Knepley CoordinatesRefToReal(dim, dim, v0, J, &quadPoints[q*dim], coords); 82973d901b8SMatthew G. Knepley (*funcs[field])(coords, funcVal, ctx); 83015496722SMatthew G. Knepley if (id == PETSCFE_CLASSID) {ierr = PetscFEInterpolate_Static((PetscFE) obj, &x[fieldOffset], q, interpolant);CHKERRQ(ierr);} 83115496722SMatthew G. Knepley else if (id == PETSCFV_CLASSID) {ierr = PetscFVInterpolate_Static((PetscFV) obj, &x[fieldOffset], q, interpolant);CHKERRQ(ierr);} 83215496722SMatthew G. Knepley else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", field); 83315496722SMatthew G. Knepley for (fc = 0; fc < Nc; ++fc) { 83415496722SMatthew G. Knepley if (debug) {ierr = PetscPrintf(PETSC_COMM_SELF, " elem %d field %d diff %g\n", c, field, PetscSqr(PetscRealPart(interpolant[fc] - funcVal[fc]))*quadWeights[q]*detJ);CHKERRQ(ierr);} 83515496722SMatthew G. Knepley elemDiff += PetscSqr(PetscRealPart(interpolant[fc] - funcVal[fc]))*quadWeights[q]*detJ; 83673d901b8SMatthew G. Knepley } 83773d901b8SMatthew G. Knepley } 83815496722SMatthew G. Knepley fieldOffset += Nb*Nc; 83973d901b8SMatthew G. Knepley localDiff[field] += elemDiff; 84073d901b8SMatthew G. Knepley } 84173d901b8SMatthew G. Knepley ierr = DMPlexVecRestoreClosure(dm, NULL, localX, c, NULL, &x);CHKERRQ(ierr); 84273d901b8SMatthew G. Knepley } 84373d901b8SMatthew G. Knepley ierr = DMRestoreLocalVector(dm, &localX);CHKERRQ(ierr); 84473d901b8SMatthew G. Knepley ierr = MPI_Allreduce(localDiff, diff, numFields, MPIU_REAL, MPI_SUM, PetscObjectComm((PetscObject)dm));CHKERRQ(ierr); 84573d901b8SMatthew G. Knepley for (field = 0; field < numFields; ++field) diff[field] = PetscSqrtReal(diff[field]); 84615496722SMatthew G. Knepley ierr = PetscFree7(localDiff,funcVal,interpolant,coords,v0,J,invJ);CHKERRQ(ierr); 84773d901b8SMatthew G. Knepley PetscFunctionReturn(0); 84873d901b8SMatthew G. Knepley } 84973d901b8SMatthew G. Knepley 85073d901b8SMatthew G. Knepley #undef __FUNCT__ 85173d901b8SMatthew G. Knepley #define __FUNCT__ "DMPlexComputeIntegralFEM" 85273d901b8SMatthew G. Knepley /*@ 85373d901b8SMatthew G. Knepley DMPlexComputeIntegralFEM - Form the local integral F from the local input X using pointwise functions specified by the user 85473d901b8SMatthew G. Knepley 85573d901b8SMatthew G. Knepley Input Parameters: 85673d901b8SMatthew G. Knepley + dm - The mesh 85773d901b8SMatthew G. Knepley . X - Local input vector 85873d901b8SMatthew G. Knepley - user - The user context 85973d901b8SMatthew G. Knepley 86073d901b8SMatthew G. Knepley Output Parameter: 86173d901b8SMatthew G. Knepley . integral - Local integral for each field 86273d901b8SMatthew G. Knepley 86373d901b8SMatthew G. Knepley Level: developer 86473d901b8SMatthew G. Knepley 86573d901b8SMatthew G. Knepley .seealso: DMPlexComputeResidualFEM() 86673d901b8SMatthew G. Knepley @*/ 8670f2d7e86SMatthew G. Knepley PetscErrorCode DMPlexComputeIntegralFEM(DM dm, Vec X, PetscReal *integral, void *user) 86873d901b8SMatthew G. Knepley { 86973d901b8SMatthew G. Knepley DM_Plex *mesh = (DM_Plex *) dm->data; 87073d901b8SMatthew G. Knepley DM dmAux; 87173d901b8SMatthew G. Knepley Vec localX, A; 8722764a2aaSMatthew G. Knepley PetscDS prob, probAux = NULL; 87373d901b8SMatthew G. Knepley PetscQuadrature q; 87473d901b8SMatthew G. Knepley PetscCellGeometry geom; 87573d901b8SMatthew G. Knepley PetscSection section, sectionAux; 87673d901b8SMatthew G. Knepley PetscReal *v0, *J, *invJ, *detJ; 87773d901b8SMatthew G. Knepley PetscScalar *u, *a = NULL; 8780f2d7e86SMatthew G. Knepley PetscInt dim, Nf, f, numCells, cStart, cEnd, c; 8790f2d7e86SMatthew G. Knepley PetscInt totDim, totDimAux; 88073d901b8SMatthew G. Knepley PetscErrorCode ierr; 88173d901b8SMatthew G. Knepley 88273d901b8SMatthew G. Knepley PetscFunctionBegin; 88373d901b8SMatthew G. Knepley /*ierr = PetscLogEventBegin(DMPLEX_IntegralFEM,dm,0,0,0);CHKERRQ(ierr);*/ 88473d901b8SMatthew G. Knepley ierr = DMGetLocalVector(dm, &localX);CHKERRQ(ierr); 88573d901b8SMatthew G. Knepley ierr = DMGlobalToLocalBegin(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 88673d901b8SMatthew G. Knepley ierr = DMGlobalToLocalEnd(dm, X, INSERT_VALUES, localX);CHKERRQ(ierr); 887c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr); 88873d901b8SMatthew G. Knepley ierr = DMGetDefaultSection(dm, §ion);CHKERRQ(ierr); 8892764a2aaSMatthew G. Knepley ierr = DMGetDS(dm, &prob);CHKERRQ(ierr); 8902764a2aaSMatthew G. Knepley ierr = PetscDSGetTotalDimension(prob, &totDim);CHKERRQ(ierr); 89173d901b8SMatthew G. Knepley ierr = PetscSectionGetNumFields(section, &Nf);CHKERRQ(ierr); 89273d901b8SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr); 89373d901b8SMatthew G. Knepley numCells = cEnd - cStart; 8940f2d7e86SMatthew G. Knepley for (f = 0; f < Nf; ++f) {integral[f] = 0.0;} 89573d901b8SMatthew G. Knepley ierr = PetscObjectQuery((PetscObject) dm, "dmAux", (PetscObject *) &dmAux);CHKERRQ(ierr); 89673d901b8SMatthew G. Knepley ierr = PetscObjectQuery((PetscObject) dm, "A", (PetscObject *) &A);CHKERRQ(ierr); 89773d901b8SMatthew G. Knepley if (dmAux) { 89873d901b8SMatthew G. Knepley ierr = DMGetDefaultSection(dmAux, §ionAux);CHKERRQ(ierr); 8992764a2aaSMatthew G. Knepley ierr = DMGetDS(dmAux, &probAux);CHKERRQ(ierr); 9002764a2aaSMatthew G. Knepley ierr = PetscDSGetTotalDimension(probAux, &totDimAux);CHKERRQ(ierr); 90173d901b8SMatthew G. Knepley } 90273d901b8SMatthew G. Knepley ierr = DMPlexInsertBoundaryValuesFEM(dm, localX);CHKERRQ(ierr); 9030f2d7e86SMatthew G. Knepley ierr = PetscMalloc5(numCells*totDim,&u,numCells*dim,&v0,numCells*dim*dim,&J,numCells*dim*dim,&invJ,numCells,&detJ);CHKERRQ(ierr); 9040f2d7e86SMatthew G. Knepley if (dmAux) {ierr = PetscMalloc1(numCells*totDimAux, &a);CHKERRQ(ierr);} 90573d901b8SMatthew G. Knepley for (c = cStart; c < cEnd; ++c) { 90673d901b8SMatthew G. Knepley PetscScalar *x = NULL; 90773d901b8SMatthew G. Knepley PetscInt i; 90873d901b8SMatthew G. Knepley 9098e0841e0SMatthew G. Knepley ierr = DMPlexComputeCellGeometryFEM(dm, c, NULL, &v0[c*dim], &J[c*dim*dim], &invJ[c*dim*dim], &detJ[c]);CHKERRQ(ierr); 91073d901b8SMatthew G. Knepley if (detJ[c] <= 0.0) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Invalid determinant %g for element %d", detJ[c], c); 91173d901b8SMatthew G. Knepley ierr = DMPlexVecGetClosure(dm, section, localX, c, NULL, &x);CHKERRQ(ierr); 9120f2d7e86SMatthew G. Knepley for (i = 0; i < totDim; ++i) u[c*totDim+i] = x[i]; 91373d901b8SMatthew G. Knepley ierr = DMPlexVecRestoreClosure(dm, section, localX, c, NULL, &x);CHKERRQ(ierr); 91473d901b8SMatthew G. Knepley if (dmAux) { 91573d901b8SMatthew G. Knepley ierr = DMPlexVecGetClosure(dmAux, sectionAux, A, c, NULL, &x);CHKERRQ(ierr); 9160f2d7e86SMatthew G. Knepley for (i = 0; i < totDimAux; ++i) a[c*totDimAux+i] = x[i]; 91773d901b8SMatthew G. Knepley ierr = DMPlexVecRestoreClosure(dmAux, sectionAux, A, c, NULL, &x);CHKERRQ(ierr); 91873d901b8SMatthew G. Knepley } 91973d901b8SMatthew G. Knepley } 92073d901b8SMatthew G. Knepley for (f = 0; f < Nf; ++f) { 9210f2d7e86SMatthew G. Knepley PetscFE fe; 92273d901b8SMatthew G. Knepley PetscInt numQuadPoints, Nb; 92373d901b8SMatthew G. Knepley /* Conforming batches */ 92473d901b8SMatthew G. Knepley PetscInt numChunks, numBatches, numBlocks, Ne, blockSize, batchSize; 92573d901b8SMatthew G. Knepley /* Remainder */ 92673d901b8SMatthew G. Knepley PetscInt Nr, offset; 92773d901b8SMatthew G. Knepley 9282764a2aaSMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, f, (PetscObject *) &fe);CHKERRQ(ierr); 9290f2d7e86SMatthew G. Knepley ierr = PetscFEGetQuadrature(fe, &q);CHKERRQ(ierr); 9300f2d7e86SMatthew G. Knepley ierr = PetscFEGetDimension(fe, &Nb);CHKERRQ(ierr); 9310f2d7e86SMatthew G. Knepley ierr = PetscFEGetTileSizes(fe, NULL, &numBlocks, NULL, &numBatches);CHKERRQ(ierr); 93273d901b8SMatthew G. Knepley ierr = PetscQuadratureGetData(q, NULL, &numQuadPoints, NULL, NULL);CHKERRQ(ierr); 93373d901b8SMatthew G. Knepley blockSize = Nb*numQuadPoints; 93473d901b8SMatthew G. Knepley batchSize = numBlocks * blockSize; 9350f2d7e86SMatthew G. Knepley ierr = PetscFESetTileSizes(fe, blockSize, numBlocks, batchSize, numBatches);CHKERRQ(ierr); 93673d901b8SMatthew G. Knepley numChunks = numCells / (numBatches*batchSize); 93773d901b8SMatthew G. Knepley Ne = numChunks*numBatches*batchSize; 93873d901b8SMatthew G. Knepley Nr = numCells % (numBatches*batchSize); 93973d901b8SMatthew G. Knepley offset = numCells - Nr; 94073d901b8SMatthew G. Knepley geom.v0 = v0; 94173d901b8SMatthew G. Knepley geom.J = J; 94273d901b8SMatthew G. Knepley geom.invJ = invJ; 94373d901b8SMatthew G. Knepley geom.detJ = detJ; 9440f2d7e86SMatthew G. Knepley ierr = PetscFEIntegrate(fe, prob, f, Ne, geom, u, probAux, a, integral);CHKERRQ(ierr); 94573d901b8SMatthew G. Knepley geom.v0 = &v0[offset*dim]; 94673d901b8SMatthew G. Knepley geom.J = &J[offset*dim*dim]; 94773d901b8SMatthew G. Knepley geom.invJ = &invJ[offset*dim*dim]; 94873d901b8SMatthew G. Knepley geom.detJ = &detJ[offset]; 9490f2d7e86SMatthew G. Knepley ierr = PetscFEIntegrate(fe, prob, f, Nr, geom, &u[offset*totDim], probAux, &a[offset*totDimAux], integral);CHKERRQ(ierr); 95073d901b8SMatthew G. Knepley } 95173d901b8SMatthew G. Knepley ierr = PetscFree5(u,v0,J,invJ,detJ);CHKERRQ(ierr); 95273d901b8SMatthew G. Knepley if (dmAux) {ierr = PetscFree(a);CHKERRQ(ierr);} 95373d901b8SMatthew G. Knepley if (mesh->printFEM) { 95473d901b8SMatthew G. Knepley ierr = PetscPrintf(PetscObjectComm((PetscObject) dm), "Local integral:");CHKERRQ(ierr); 95573d901b8SMatthew G. Knepley for (f = 0; f < Nf; ++f) {ierr = PetscPrintf(PetscObjectComm((PetscObject) dm), " %g", integral[f]);CHKERRQ(ierr);} 95673d901b8SMatthew G. Knepley ierr = PetscPrintf(PetscObjectComm((PetscObject) dm), "\n");CHKERRQ(ierr); 95773d901b8SMatthew G. Knepley } 95873d901b8SMatthew G. Knepley ierr = DMRestoreLocalVector(dm, &localX);CHKERRQ(ierr); 95973d901b8SMatthew G. Knepley /* TODO: Allreduce for integral */ 96073d901b8SMatthew G. Knepley /*ierr = PetscLogEventEnd(DMPLEX_IntegralFEM,dm,0,0,0);CHKERRQ(ierr);*/ 96173d901b8SMatthew G. Knepley PetscFunctionReturn(0); 96273d901b8SMatthew G. Knepley } 96373d901b8SMatthew G. Knepley 96473d901b8SMatthew G. Knepley #undef __FUNCT__ 965d69c5d34SMatthew G. Knepley #define __FUNCT__ "DMPlexComputeInterpolatorFEM" 966d69c5d34SMatthew G. Knepley /*@ 967d69c5d34SMatthew G. Knepley DMPlexComputeInterpolatorFEM - Form the local portion of the interpolation matrix I from the coarse DM to the uniformly refined DM. 968d69c5d34SMatthew G. Knepley 969d69c5d34SMatthew G. Knepley Input Parameters: 970d69c5d34SMatthew G. Knepley + dmf - The fine mesh 971d69c5d34SMatthew G. Knepley . dmc - The coarse mesh 972d69c5d34SMatthew G. Knepley - user - The user context 973d69c5d34SMatthew G. Knepley 974d69c5d34SMatthew G. Knepley Output Parameter: 975934789fcSMatthew G. Knepley . In - The interpolation matrix 976d69c5d34SMatthew G. Knepley 977d69c5d34SMatthew G. Knepley Note: 978d69c5d34SMatthew G. Knepley The first member of the user context must be an FEMContext. 979d69c5d34SMatthew G. Knepley 980d69c5d34SMatthew G. Knepley We form the residual one batch of elements at a time. This allows us to offload work onto an accelerator, 981d69c5d34SMatthew G. Knepley like a GPU, or vectorize on a multicore machine. 982d69c5d34SMatthew G. Knepley 983d69c5d34SMatthew G. Knepley Level: developer 984d69c5d34SMatthew G. Knepley 985d69c5d34SMatthew G. Knepley .seealso: DMPlexComputeJacobianFEM() 986d69c5d34SMatthew G. Knepley @*/ 987934789fcSMatthew G. Knepley PetscErrorCode DMPlexComputeInterpolatorFEM(DM dmc, DM dmf, Mat In, void *user) 988d69c5d34SMatthew G. Knepley { 989d69c5d34SMatthew G. Knepley DM_Plex *mesh = (DM_Plex *) dmc->data; 990d69c5d34SMatthew G. Knepley const char *name = "Interpolator"; 9912764a2aaSMatthew G. Knepley PetscDS prob; 992d69c5d34SMatthew G. Knepley PetscFE *feRef; 993d69c5d34SMatthew G. Knepley PetscSection fsection, fglobalSection; 994d69c5d34SMatthew G. Knepley PetscSection csection, cglobalSection; 995d69c5d34SMatthew G. Knepley PetscScalar *elemMat; 996942a7a06SMatthew G. Knepley PetscInt dim, Nf, f, fieldI, fieldJ, offsetI, offsetJ, cStart, cEnd, c; 9970f2d7e86SMatthew G. Knepley PetscInt cTotDim, rTotDim = 0; 998d69c5d34SMatthew G. Knepley PetscErrorCode ierr; 999d69c5d34SMatthew G. Knepley 1000d69c5d34SMatthew G. Knepley PetscFunctionBegin; 1001d69c5d34SMatthew G. Knepley ierr = PetscLogEventBegin(DMPLEX_InterpolatorFEM,dmc,dmf,0,0);CHKERRQ(ierr); 1002c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dmf, &dim);CHKERRQ(ierr); 1003d69c5d34SMatthew G. Knepley ierr = DMGetDefaultSection(dmf, &fsection);CHKERRQ(ierr); 1004d69c5d34SMatthew G. Knepley ierr = DMGetDefaultGlobalSection(dmf, &fglobalSection);CHKERRQ(ierr); 1005d69c5d34SMatthew G. Knepley ierr = DMGetDefaultSection(dmc, &csection);CHKERRQ(ierr); 1006d69c5d34SMatthew G. Knepley ierr = DMGetDefaultGlobalSection(dmc, &cglobalSection);CHKERRQ(ierr); 1007d69c5d34SMatthew G. Knepley ierr = PetscSectionGetNumFields(fsection, &Nf);CHKERRQ(ierr); 1008d69c5d34SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dmc, 0, &cStart, &cEnd);CHKERRQ(ierr); 10092764a2aaSMatthew G. Knepley ierr = DMGetDS(dmf, &prob);CHKERRQ(ierr); 1010d69c5d34SMatthew G. Knepley ierr = PetscMalloc1(Nf,&feRef);CHKERRQ(ierr); 1011d69c5d34SMatthew G. Knepley for (f = 0; f < Nf; ++f) { 10120f2d7e86SMatthew G. Knepley PetscFE fe; 10130f2d7e86SMatthew G. Knepley PetscInt rNb, Nc; 1014d69c5d34SMatthew G. Knepley 10152764a2aaSMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, f, (PetscObject *) &fe);CHKERRQ(ierr); 10160f2d7e86SMatthew G. Knepley ierr = PetscFERefine(fe, &feRef[f]);CHKERRQ(ierr); 1017d69c5d34SMatthew G. Knepley ierr = PetscFEGetDimension(feRef[f], &rNb);CHKERRQ(ierr); 10180f2d7e86SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Nc);CHKERRQ(ierr); 10190f2d7e86SMatthew G. Knepley rTotDim += rNb*Nc; 1020d69c5d34SMatthew G. Knepley } 10212764a2aaSMatthew G. Knepley ierr = PetscDSGetTotalDimension(prob, &cTotDim);CHKERRQ(ierr); 10220f2d7e86SMatthew G. Knepley ierr = PetscMalloc1(rTotDim*cTotDim,&elemMat);CHKERRQ(ierr); 10230f2d7e86SMatthew G. Knepley ierr = PetscMemzero(elemMat, rTotDim*cTotDim * sizeof(PetscScalar));CHKERRQ(ierr); 1024d69c5d34SMatthew G. Knepley for (fieldI = 0, offsetI = 0; fieldI < Nf; ++fieldI) { 1025d69c5d34SMatthew G. Knepley PetscDualSpace Qref; 1026d69c5d34SMatthew G. Knepley PetscQuadrature f; 1027d69c5d34SMatthew G. Knepley const PetscReal *qpoints, *qweights; 1028d69c5d34SMatthew G. Knepley PetscReal *points; 1029d69c5d34SMatthew G. Knepley PetscInt npoints = 0, Nc, Np, fpdim, i, k, p, d; 1030d69c5d34SMatthew G. Knepley 1031d69c5d34SMatthew G. Knepley /* Compose points from all dual basis functionals */ 1032d69c5d34SMatthew G. Knepley ierr = PetscFEGetDualSpace(feRef[fieldI], &Qref);CHKERRQ(ierr); 10330f2d7e86SMatthew G. Knepley ierr = PetscFEGetNumComponents(feRef[fieldI], &Nc);CHKERRQ(ierr); 1034d69c5d34SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(Qref, &fpdim);CHKERRQ(ierr); 1035d69c5d34SMatthew G. Knepley for (i = 0; i < fpdim; ++i) { 1036d69c5d34SMatthew G. Knepley ierr = PetscDualSpaceGetFunctional(Qref, i, &f);CHKERRQ(ierr); 1037d69c5d34SMatthew G. Knepley ierr = PetscQuadratureGetData(f, NULL, &Np, NULL, NULL);CHKERRQ(ierr); 1038d69c5d34SMatthew G. Knepley npoints += Np; 1039d69c5d34SMatthew G. Knepley } 1040d69c5d34SMatthew G. Knepley ierr = PetscMalloc1(npoints*dim,&points);CHKERRQ(ierr); 1041d69c5d34SMatthew G. Knepley for (i = 0, k = 0; i < fpdim; ++i) { 1042d69c5d34SMatthew G. Knepley ierr = PetscDualSpaceGetFunctional(Qref, i, &f);CHKERRQ(ierr); 1043d69c5d34SMatthew G. Knepley ierr = PetscQuadratureGetData(f, NULL, &Np, &qpoints, NULL);CHKERRQ(ierr); 1044d69c5d34SMatthew G. Knepley for (p = 0; p < Np; ++p, ++k) for (d = 0; d < dim; ++d) points[k*dim+d] = qpoints[p*dim+d]; 1045d69c5d34SMatthew G. Knepley } 1046d69c5d34SMatthew G. Knepley 1047d69c5d34SMatthew G. Knepley for (fieldJ = 0, offsetJ = 0; fieldJ < Nf; ++fieldJ) { 10480f2d7e86SMatthew G. Knepley PetscFE fe; 1049d69c5d34SMatthew G. Knepley PetscReal *B; 105036a6d9c0SMatthew G. Knepley PetscInt NcJ, cpdim, j; 1051d69c5d34SMatthew G. Knepley 1052d69c5d34SMatthew G. Knepley /* Evaluate basis at points */ 10532764a2aaSMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, fieldJ, (PetscObject *) &fe);CHKERRQ(ierr); 10540f2d7e86SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &NcJ);CHKERRQ(ierr); 10550f2d7e86SMatthew G. Knepley ierr = PetscFEGetDimension(fe, &cpdim);CHKERRQ(ierr); 1056ffe73a53SMatthew G. Knepley /* For now, fields only interpolate themselves */ 1057ffe73a53SMatthew G. Knepley if (fieldI == fieldJ) { 10587c927364SMatthew G. Knepley if (Nc != NcJ) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Number of components in fine space field %d does not match coarse field %d", Nc, NcJ); 10590f2d7e86SMatthew G. Knepley ierr = PetscFEGetTabulation(fe, npoints, points, &B, NULL, NULL);CHKERRQ(ierr); 1060d69c5d34SMatthew G. Knepley for (i = 0, k = 0; i < fpdim; ++i) { 1061d69c5d34SMatthew G. Knepley ierr = PetscDualSpaceGetFunctional(Qref, i, &f);CHKERRQ(ierr); 1062d69c5d34SMatthew G. Knepley ierr = PetscQuadratureGetData(f, NULL, &Np, NULL, &qweights);CHKERRQ(ierr); 1063d69c5d34SMatthew G. Knepley for (p = 0; p < Np; ++p, ++k) { 106436a6d9c0SMatthew G. Knepley for (j = 0; j < cpdim; ++j) { 10650f2d7e86SMatthew G. Knepley for (c = 0; c < Nc; ++c) elemMat[(offsetI + i*Nc + c)*cTotDim + offsetJ + j*NcJ + c] += B[k*cpdim*NcJ+j*Nc+c]*qweights[p]; 106636a6d9c0SMatthew G. Knepley } 1067d69c5d34SMatthew G. Knepley } 1068d69c5d34SMatthew G. Knepley } 10690f2d7e86SMatthew G. Knepley ierr = PetscFERestoreTabulation(fe, npoints, points, &B, NULL, NULL);CHKERRQ(ierr);CHKERRQ(ierr); 1070ffe73a53SMatthew G. Knepley } 107136a6d9c0SMatthew G. Knepley offsetJ += cpdim*NcJ; 1072d69c5d34SMatthew G. Knepley } 1073d69c5d34SMatthew G. Knepley offsetI += fpdim*Nc; 1074549a8adaSMatthew G. Knepley ierr = PetscFree(points);CHKERRQ(ierr); 1075d69c5d34SMatthew G. Knepley } 10760f2d7e86SMatthew G. Knepley if (mesh->printFEM > 1) {ierr = DMPrintCellMatrix(0, name, rTotDim, cTotDim, elemMat);CHKERRQ(ierr);} 10777f5b169aSMatthew G. Knepley /* Preallocate matrix */ 10787f5b169aSMatthew G. Knepley { 10797f5b169aSMatthew G. Knepley PetscHashJK ht; 10807f5b169aSMatthew G. Knepley PetscLayout rLayout; 10817f5b169aSMatthew G. Knepley PetscInt *dnz, *onz, *cellCIndices, *cellFIndices; 10827f5b169aSMatthew G. Knepley PetscInt locRows, rStart, rEnd, cell, r; 10837f5b169aSMatthew G. Knepley 10847f5b169aSMatthew G. Knepley ierr = MatGetLocalSize(In, &locRows, NULL);CHKERRQ(ierr); 10857f5b169aSMatthew G. Knepley ierr = PetscLayoutCreate(PetscObjectComm((PetscObject) In), &rLayout);CHKERRQ(ierr); 10867f5b169aSMatthew G. Knepley ierr = PetscLayoutSetLocalSize(rLayout, locRows);CHKERRQ(ierr); 10877f5b169aSMatthew G. Knepley ierr = PetscLayoutSetBlockSize(rLayout, 1);CHKERRQ(ierr); 10887f5b169aSMatthew G. Knepley ierr = PetscLayoutSetUp(rLayout);CHKERRQ(ierr); 10897f5b169aSMatthew G. Knepley ierr = PetscLayoutGetRange(rLayout, &rStart, &rEnd);CHKERRQ(ierr); 10907f5b169aSMatthew G. Knepley ierr = PetscLayoutDestroy(&rLayout);CHKERRQ(ierr); 10917f5b169aSMatthew G. Knepley ierr = PetscCalloc4(locRows,&dnz,locRows,&onz,cTotDim,&cellCIndices,rTotDim,&cellFIndices);CHKERRQ(ierr); 10927f5b169aSMatthew G. Knepley ierr = PetscHashJKCreate(&ht);CHKERRQ(ierr); 10937f5b169aSMatthew G. Knepley for (cell = cStart; cell < cEnd; ++cell) { 10947f5b169aSMatthew G. Knepley ierr = DMPlexMatGetClosureIndicesRefined(dmf, fsection, fglobalSection, dmc, csection, cglobalSection, cell, cellCIndices, cellFIndices);CHKERRQ(ierr); 10957f5b169aSMatthew G. Knepley for (r = 0; r < rTotDim; ++r) { 10967f5b169aSMatthew G. Knepley PetscHashJKKey key; 10977f5b169aSMatthew G. Knepley PetscHashJKIter missing, iter; 10987f5b169aSMatthew G. Knepley 10997f5b169aSMatthew G. Knepley key.j = cellFIndices[r]; 11007f5b169aSMatthew G. Knepley if (key.j < 0) continue; 11017f5b169aSMatthew G. Knepley for (c = 0; c < cTotDim; ++c) { 11027f5b169aSMatthew G. Knepley key.k = cellCIndices[c]; 11037f5b169aSMatthew G. Knepley if (key.k < 0) continue; 11047f5b169aSMatthew G. Knepley ierr = PetscHashJKPut(ht, key, &missing, &iter);CHKERRQ(ierr); 11057f5b169aSMatthew G. Knepley if (missing) { 11067f5b169aSMatthew G. Knepley ierr = PetscHashJKSet(ht, iter, 1);CHKERRQ(ierr); 11077f5b169aSMatthew G. Knepley if ((key.k >= rStart) && (key.k < rEnd)) ++dnz[key.j-rStart]; 11087f5b169aSMatthew G. Knepley else ++onz[key.j-rStart]; 11097f5b169aSMatthew G. Knepley } 11107f5b169aSMatthew G. Knepley } 11117f5b169aSMatthew G. Knepley } 11127f5b169aSMatthew G. Knepley } 11137f5b169aSMatthew G. Knepley ierr = PetscHashJKDestroy(&ht);CHKERRQ(ierr); 11147f5b169aSMatthew G. Knepley ierr = MatXAIJSetPreallocation(In, 1, dnz, onz, NULL, NULL);CHKERRQ(ierr); 11157f5b169aSMatthew G. Knepley ierr = MatSetOption(In, MAT_NEW_NONZERO_ALLOCATION_ERR,PETSC_TRUE);CHKERRQ(ierr); 11167f5b169aSMatthew G. Knepley ierr = PetscFree4(dnz,onz,cellCIndices,cellFIndices);CHKERRQ(ierr); 11177f5b169aSMatthew G. Knepley } 11187f5b169aSMatthew G. Knepley /* Fill matrix */ 11197f5b169aSMatthew G. Knepley ierr = MatZeroEntries(In);CHKERRQ(ierr); 1120d69c5d34SMatthew G. Knepley for (c = cStart; c < cEnd; ++c) { 1121934789fcSMatthew G. Knepley ierr = DMPlexMatSetClosureRefined(dmf, fsection, fglobalSection, dmc, csection, cglobalSection, In, c, elemMat, INSERT_VALUES);CHKERRQ(ierr); 1122d69c5d34SMatthew G. Knepley } 1123549a8adaSMatthew G. Knepley for (f = 0; f < Nf; ++f) {ierr = PetscFEDestroy(&feRef[f]);CHKERRQ(ierr);} 1124d69c5d34SMatthew G. Knepley ierr = PetscFree(feRef);CHKERRQ(ierr); 1125549a8adaSMatthew G. Knepley ierr = PetscFree(elemMat);CHKERRQ(ierr); 1126934789fcSMatthew G. Knepley ierr = MatAssemblyBegin(In, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1127934789fcSMatthew G. Knepley ierr = MatAssemblyEnd(In, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1128d69c5d34SMatthew G. Knepley if (mesh->printFEM) { 1129d69c5d34SMatthew G. Knepley ierr = PetscPrintf(PETSC_COMM_WORLD, "%s:\n", name);CHKERRQ(ierr); 1130934789fcSMatthew G. Knepley ierr = MatChop(In, 1.0e-10);CHKERRQ(ierr); 1131934789fcSMatthew G. Knepley ierr = MatView(In, PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); 1132d69c5d34SMatthew G. Knepley } 1133d69c5d34SMatthew G. Knepley ierr = PetscLogEventEnd(DMPLEX_InterpolatorFEM,dmc,dmf,0,0);CHKERRQ(ierr); 1134d69c5d34SMatthew G. Knepley PetscFunctionReturn(0); 1135d69c5d34SMatthew G. Knepley } 11366c73c22cSMatthew G. Knepley 11376c73c22cSMatthew G. Knepley #undef __FUNCT__ 11387c927364SMatthew G. Knepley #define __FUNCT__ "DMPlexComputeInjectorFEM" 11397c927364SMatthew G. Knepley PetscErrorCode DMPlexComputeInjectorFEM(DM dmc, DM dmf, VecScatter *sc, void *user) 11407c927364SMatthew G. Knepley { 1141e9d4ef1bSMatthew G. Knepley PetscDS prob; 11427c927364SMatthew G. Knepley PetscFE *feRef; 11437c927364SMatthew G. Knepley Vec fv, cv; 11447c927364SMatthew G. Knepley IS fis, cis; 11457c927364SMatthew G. Knepley PetscSection fsection, fglobalSection, csection, cglobalSection; 11467c927364SMatthew G. Knepley PetscInt *cmap, *cellCIndices, *cellFIndices, *cindices, *findices; 11477c927364SMatthew G. Knepley PetscInt cTotDim, fTotDim = 0, Nf, f, field, cStart, cEnd, c, dim, d, startC, offsetC, offsetF, m; 11487c927364SMatthew G. Knepley PetscErrorCode ierr; 11497c927364SMatthew G. Knepley 11507c927364SMatthew G. Knepley PetscFunctionBegin; 115175a69067SMatthew G. Knepley ierr = PetscLogEventBegin(DMPLEX_InjectorFEM,dmc,dmf,0,0);CHKERRQ(ierr); 1152c73cfb54SMatthew G. Knepley ierr = DMGetDimension(dmf, &dim);CHKERRQ(ierr); 11537c927364SMatthew G. Knepley ierr = DMGetDefaultSection(dmf, &fsection);CHKERRQ(ierr); 11547c927364SMatthew G. Knepley ierr = DMGetDefaultGlobalSection(dmf, &fglobalSection);CHKERRQ(ierr); 11557c927364SMatthew G. Knepley ierr = DMGetDefaultSection(dmc, &csection);CHKERRQ(ierr); 11567c927364SMatthew G. Knepley ierr = DMGetDefaultGlobalSection(dmc, &cglobalSection);CHKERRQ(ierr); 11577c927364SMatthew G. Knepley ierr = PetscSectionGetNumFields(fsection, &Nf);CHKERRQ(ierr); 11587c927364SMatthew G. Knepley ierr = DMPlexGetHeightStratum(dmc, 0, &cStart, &cEnd);CHKERRQ(ierr); 1159e9d4ef1bSMatthew G. Knepley ierr = DMGetDS(dmc, &prob);CHKERRQ(ierr); 11607c927364SMatthew G. Knepley ierr = PetscMalloc1(Nf,&feRef);CHKERRQ(ierr); 11617c927364SMatthew G. Knepley for (f = 0; f < Nf; ++f) { 11627c927364SMatthew G. Knepley PetscFE fe; 11637c927364SMatthew G. Knepley PetscInt fNb, Nc; 11647c927364SMatthew G. Knepley 1165e9d4ef1bSMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, f, (PetscObject *) &fe);CHKERRQ(ierr); 11667c927364SMatthew G. Knepley ierr = PetscFERefine(fe, &feRef[f]);CHKERRQ(ierr); 11677c927364SMatthew G. Knepley ierr = PetscFEGetDimension(feRef[f], &fNb);CHKERRQ(ierr); 11687c927364SMatthew G. Knepley ierr = PetscFEGetNumComponents(fe, &Nc);CHKERRQ(ierr); 11697c927364SMatthew G. Knepley fTotDim += fNb*Nc; 11707c927364SMatthew G. Knepley } 1171e9d4ef1bSMatthew G. Knepley ierr = PetscDSGetTotalDimension(prob, &cTotDim);CHKERRQ(ierr); 11727c927364SMatthew G. Knepley ierr = PetscMalloc1(cTotDim,&cmap);CHKERRQ(ierr); 11737c927364SMatthew G. Knepley for (field = 0, offsetC = 0, offsetF = 0; field < Nf; ++field) { 11747c927364SMatthew G. Knepley PetscFE feC; 11757c927364SMatthew G. Knepley PetscDualSpace QF, QC; 11767c927364SMatthew G. Knepley PetscInt NcF, NcC, fpdim, cpdim; 11777c927364SMatthew G. Knepley 1178e9d4ef1bSMatthew G. Knepley ierr = PetscDSGetDiscretization(prob, field, (PetscObject *) &feC);CHKERRQ(ierr); 11797c927364SMatthew G. Knepley ierr = PetscFEGetNumComponents(feC, &NcC);CHKERRQ(ierr); 11807c927364SMatthew G. Knepley ierr = PetscFEGetNumComponents(feRef[field], &NcF);CHKERRQ(ierr); 11817c927364SMatthew G. Knepley if (NcF != NcC) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Number of components in fine space field %d does not match coarse field %d", NcF, NcC); 11827c927364SMatthew G. Knepley ierr = PetscFEGetDualSpace(feRef[field], &QF);CHKERRQ(ierr); 11837c927364SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(QF, &fpdim);CHKERRQ(ierr); 11847c927364SMatthew G. Knepley ierr = PetscFEGetDualSpace(feC, &QC);CHKERRQ(ierr); 11857c927364SMatthew G. Knepley ierr = PetscDualSpaceGetDimension(QC, &cpdim);CHKERRQ(ierr); 11867c927364SMatthew G. Knepley for (c = 0; c < cpdim; ++c) { 11877c927364SMatthew G. Knepley PetscQuadrature cfunc; 11887c927364SMatthew G. Knepley const PetscReal *cqpoints; 11897c927364SMatthew G. Knepley PetscInt NpC; 11907c927364SMatthew G. Knepley 11917c927364SMatthew G. Knepley ierr = PetscDualSpaceGetFunctional(QC, c, &cfunc);CHKERRQ(ierr); 11927c927364SMatthew G. Knepley ierr = PetscQuadratureGetData(cfunc, NULL, &NpC, &cqpoints, NULL);CHKERRQ(ierr); 11937c927364SMatthew G. Knepley if (NpC != 1) SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Do not know how to do injection for moments"); 11947c927364SMatthew G. Knepley for (f = 0; f < fpdim; ++f) { 11957c927364SMatthew G. Knepley PetscQuadrature ffunc; 11967c927364SMatthew G. Knepley const PetscReal *fqpoints; 11977c927364SMatthew G. Knepley PetscReal sum = 0.0; 11987c927364SMatthew G. Knepley PetscInt NpF, comp; 11997c927364SMatthew G. Knepley 12007c927364SMatthew G. Knepley ierr = PetscDualSpaceGetFunctional(QF, f, &ffunc);CHKERRQ(ierr); 12017c927364SMatthew G. Knepley ierr = PetscQuadratureGetData(ffunc, NULL, &NpF, &fqpoints, NULL);CHKERRQ(ierr); 12027c927364SMatthew G. Knepley if (NpC != NpF) continue; 12037c927364SMatthew G. Knepley for (d = 0; d < dim; ++d) sum += PetscAbsReal(cqpoints[d] - fqpoints[d]); 12047c927364SMatthew G. Knepley if (sum > 1.0e-9) continue; 12057c927364SMatthew G. Knepley for (comp = 0; comp < NcC; ++comp) { 12067c927364SMatthew G. Knepley cmap[(offsetC+c)*NcC+comp] = (offsetF+f)*NcF+comp; 12077c927364SMatthew G. Knepley } 12087c927364SMatthew G. Knepley break; 12097c927364SMatthew G. Knepley } 12107c927364SMatthew G. Knepley } 12117c927364SMatthew G. Knepley offsetC += cpdim*NcC; 12127c927364SMatthew G. Knepley offsetF += fpdim*NcF; 12137c927364SMatthew G. Knepley } 12147c927364SMatthew G. Knepley for (f = 0; f < Nf; ++f) {ierr = PetscFEDestroy(&feRef[f]);CHKERRQ(ierr);} 12157c927364SMatthew G. Knepley ierr = PetscFree(feRef);CHKERRQ(ierr); 12167c927364SMatthew G. Knepley 12177c927364SMatthew G. Knepley ierr = DMGetGlobalVector(dmf, &fv);CHKERRQ(ierr); 12187c927364SMatthew G. Knepley ierr = DMGetGlobalVector(dmc, &cv);CHKERRQ(ierr); 12197c927364SMatthew G. Knepley ierr = VecGetOwnershipRange(cv, &startC, NULL);CHKERRQ(ierr); 12207c927364SMatthew G. Knepley ierr = PetscSectionGetConstrainedStorageSize(cglobalSection, &m);CHKERRQ(ierr); 12217c927364SMatthew G. Knepley ierr = PetscMalloc2(cTotDim,&cellCIndices,fTotDim,&cellFIndices);CHKERRQ(ierr); 1222aa7da3c4SMatthew G. Knepley ierr = PetscMalloc1(m,&cindices);CHKERRQ(ierr); 1223aa7da3c4SMatthew G. Knepley ierr = PetscMalloc1(m,&findices);CHKERRQ(ierr); 12247c927364SMatthew G. Knepley for (d = 0; d < m; ++d) cindices[d] = findices[d] = -1; 12257c927364SMatthew G. Knepley for (c = cStart; c < cEnd; ++c) { 12267c927364SMatthew G. Knepley ierr = DMPlexMatGetClosureIndicesRefined(dmf, fsection, fglobalSection, dmc, csection, cglobalSection, c, cellCIndices, cellFIndices);CHKERRQ(ierr); 12277c927364SMatthew G. Knepley for (d = 0; d < cTotDim; ++d) { 12287c927364SMatthew G. Knepley if (cellCIndices[d] < 0) continue; 12297c927364SMatthew G. Knepley if ((findices[cellCIndices[d]-startC] >= 0) && (findices[cellCIndices[d]-startC] != cellFIndices[cmap[d]])) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_PLIB, "Coarse dof %d maps to both %d and %d", cindices[cellCIndices[d]-startC], findices[cellCIndices[d]-startC], cellFIndices[cmap[d]]); 12307c927364SMatthew G. Knepley cindices[cellCIndices[d]-startC] = cellCIndices[d]; 12317c927364SMatthew G. Knepley findices[cellCIndices[d]-startC] = cellFIndices[cmap[d]]; 12327c927364SMatthew G. Knepley } 12337c927364SMatthew G. Knepley } 12347c927364SMatthew G. Knepley ierr = PetscFree(cmap);CHKERRQ(ierr); 12357c927364SMatthew G. Knepley ierr = PetscFree2(cellCIndices,cellFIndices);CHKERRQ(ierr); 12367c927364SMatthew G. Knepley 12377c927364SMatthew G. Knepley ierr = ISCreateGeneral(PETSC_COMM_SELF, m, cindices, PETSC_OWN_POINTER, &cis);CHKERRQ(ierr); 12387c927364SMatthew G. Knepley ierr = ISCreateGeneral(PETSC_COMM_SELF, m, findices, PETSC_OWN_POINTER, &fis);CHKERRQ(ierr); 12397c927364SMatthew G. Knepley ierr = VecScatterCreate(cv, cis, fv, fis, sc);CHKERRQ(ierr); 12407c927364SMatthew G. Knepley ierr = ISDestroy(&cis);CHKERRQ(ierr); 12417c927364SMatthew G. Knepley ierr = ISDestroy(&fis);CHKERRQ(ierr); 12427c927364SMatthew G. Knepley ierr = DMRestoreGlobalVector(dmf, &fv);CHKERRQ(ierr); 12437c927364SMatthew G. Knepley ierr = DMRestoreGlobalVector(dmc, &cv);CHKERRQ(ierr); 124475a69067SMatthew G. Knepley ierr = PetscLogEventEnd(DMPLEX_InjectorFEM,dmc,dmf,0,0);CHKERRQ(ierr); 1245cb1e1211SMatthew G Knepley PetscFunctionReturn(0); 1246cb1e1211SMatthew G Knepley } 1247