1c4762a1bSJed Brown static char help[] = "Tests various DMPlex routines to construct, refine and distribute a mesh.\n\n"; 2c4762a1bSJed Brown 3c4762a1bSJed Brown #include <petscdmplex.h> 40a19bb7dSprj- #include <petscsf.h> 5c4762a1bSJed Brown 6c4762a1bSJed Brown enum {STAGE_LOAD, STAGE_DISTRIBUTE, STAGE_REFINE, STAGE_OVERLAP}; 7c4762a1bSJed Brown 8c4762a1bSJed Brown typedef struct { 9c4762a1bSJed Brown PetscLogEvent createMeshEvent; 10c4762a1bSJed Brown PetscLogStage stages[4]; 11c4762a1bSJed Brown /* Domain and mesh definition */ 12c4762a1bSJed Brown PetscInt dim; /* The topological mesh dimension */ 13c4762a1bSJed Brown PetscInt overlap; /* The cell overlap to use during partitioning */ 14c4762a1bSJed Brown PetscBool testp4est[2]; 15c4762a1bSJed Brown PetscBool redistribute; 16c4762a1bSJed Brown PetscBool final_ref; /* Run refinement at the end */ 17c4762a1bSJed Brown PetscBool final_diagnostics; /* Run diagnostics on the final mesh */ 18c4762a1bSJed Brown } AppCtx; 19c4762a1bSJed Brown 20c4762a1bSJed Brown PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options) 21c4762a1bSJed Brown { 22c4762a1bSJed Brown PetscErrorCode ierr; 23c4762a1bSJed Brown 24c4762a1bSJed Brown PetscFunctionBegin; 25c4762a1bSJed Brown options->dim = 2; 26c4762a1bSJed Brown options->overlap = 0; 27c4762a1bSJed Brown options->testp4est[0] = PETSC_FALSE; 28c4762a1bSJed Brown options->testp4est[1] = PETSC_FALSE; 29c4762a1bSJed Brown options->redistribute = PETSC_FALSE; 30c4762a1bSJed Brown options->final_ref = PETSC_FALSE; 31c4762a1bSJed Brown options->final_diagnostics = PETSC_TRUE; 32c4762a1bSJed Brown 33c4762a1bSJed Brown ierr = PetscOptionsBegin(comm, "", "Meshing Problem Options", "DMPLEX");CHKERRQ(ierr); 34c4762a1bSJed Brown ierr = PetscOptionsRangeInt("-dim", "The topological mesh dimension", "ex1.c", options->dim, &options->dim, NULL,1,3);CHKERRQ(ierr); 35c4762a1bSJed Brown ierr = PetscOptionsBoundedInt("-overlap", "The cell overlap for partitioning", "ex1.c", options->overlap, &options->overlap, NULL,0);CHKERRQ(ierr); 36c4762a1bSJed Brown ierr = PetscOptionsBool("-test_p4est_seq", "Test p4est with sequential base DM", "ex1.c", options->testp4est[0], &options->testp4est[0], NULL);CHKERRQ(ierr); 37c4762a1bSJed Brown ierr = PetscOptionsBool("-test_p4est_par", "Test p4est with parallel base DM", "ex1.c", options->testp4est[1], &options->testp4est[1], NULL);CHKERRQ(ierr); 38c4762a1bSJed Brown ierr = PetscOptionsBool("-test_redistribute", "Test redistribution", "ex1.c", options->redistribute, &options->redistribute, NULL);CHKERRQ(ierr); 39c4762a1bSJed Brown ierr = PetscOptionsBool("-final_ref", "Run uniform refinement on the final mesh", "ex1.c", options->final_ref, &options->final_ref, NULL);CHKERRQ(ierr); 40c4762a1bSJed Brown ierr = PetscOptionsBool("-final_diagnostics", "Run diagnostics on the final mesh", "ex1.c", options->final_diagnostics, &options->final_diagnostics, NULL);CHKERRQ(ierr); 41*1e1ea65dSPierre Jolivet ierr = PetscOptionsEnd();CHKERRQ(ierr); 42c4762a1bSJed Brown 43c4762a1bSJed Brown ierr = PetscLogEventRegister("CreateMesh", DM_CLASSID, &options->createMeshEvent);CHKERRQ(ierr); 44c4762a1bSJed Brown ierr = PetscLogStageRegister("MeshLoad", &options->stages[STAGE_LOAD]);CHKERRQ(ierr); 45c4762a1bSJed Brown ierr = PetscLogStageRegister("MeshDistribute", &options->stages[STAGE_DISTRIBUTE]);CHKERRQ(ierr); 46c4762a1bSJed Brown ierr = PetscLogStageRegister("MeshRefine", &options->stages[STAGE_REFINE]);CHKERRQ(ierr); 47c4762a1bSJed Brown ierr = PetscLogStageRegister("MeshOverlap", &options->stages[STAGE_OVERLAP]);CHKERRQ(ierr); 48c4762a1bSJed Brown PetscFunctionReturn(0); 49c4762a1bSJed Brown } 50c4762a1bSJed Brown 51c4762a1bSJed Brown PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm) 52c4762a1bSJed Brown { 53c4762a1bSJed Brown PetscInt dim = user->dim; 54c4762a1bSJed Brown PetscBool testp4est_seq = user->testp4est[0]; 55c4762a1bSJed Brown PetscBool testp4est_par = user->testp4est[1]; 56c4762a1bSJed Brown PetscMPIInt rank, size; 57db2bf62eSStefano Zampini PetscBool periodic; 58c4762a1bSJed Brown PetscErrorCode ierr; 59c4762a1bSJed Brown 60c4762a1bSJed Brown PetscFunctionBegin; 61c4762a1bSJed Brown ierr = PetscLogEventBegin(user->createMeshEvent,0,0,0,0);CHKERRQ(ierr); 62ffc4695bSBarry Smith ierr = MPI_Comm_rank(comm, &rank);CHKERRMPI(ierr); 63ffc4695bSBarry Smith ierr = MPI_Comm_size(comm, &size);CHKERRMPI(ierr); 64c4762a1bSJed Brown ierr = PetscLogStagePush(user->stages[STAGE_LOAD]);CHKERRQ(ierr); 6530602db0SMatthew G. Knepley ierr = DMCreate(comm, dm);CHKERRQ(ierr); 6630602db0SMatthew G. Knepley ierr = DMSetType(*dm, DMPLEX);CHKERRQ(ierr); 6730602db0SMatthew G. Knepley ierr = DMSetFromOptions(*dm);CHKERRQ(ierr); 68db2bf62eSStefano Zampini 69db2bf62eSStefano Zampini /* For topologically periodic meshes, we first localize coordinates, 70db2bf62eSStefano Zampini and then remove any information related with the 71db2bf62eSStefano Zampini automatic computation of localized vertices. 72db2bf62eSStefano Zampini This way, refinement operations and conversions to p4est 73db2bf62eSStefano Zampini will preserve the shape of the domain in physical space */ 74db2bf62eSStefano Zampini ierr = DMLocalizeCoordinates(*dm);CHKERRQ(ierr); 75db2bf62eSStefano Zampini ierr = DMGetPeriodicity(*dm, &periodic, NULL, NULL, NULL);CHKERRQ(ierr); 7630602db0SMatthew G. Knepley if (periodic) {ierr = DMSetPeriodicity(*dm, PETSC_TRUE, NULL, NULL, NULL);CHKERRQ(ierr);} 77db2bf62eSStefano Zampini 78c4762a1bSJed Brown ierr = DMViewFromOptions(*dm,NULL,"-init_dm_view");CHKERRQ(ierr); 79c4762a1bSJed Brown ierr = DMGetDimension(*dm, &dim);CHKERRQ(ierr); 80c4762a1bSJed Brown 81c4762a1bSJed Brown if (testp4est_seq) { 82c4762a1bSJed Brown #if defined(PETSC_HAVE_P4EST) 83c4762a1bSJed Brown DM dmConv = NULL; 84c4762a1bSJed Brown 8554fcfd0cSMatthew G. Knepley ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr); 8654fcfd0cSMatthew G. Knepley ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr); 8754fcfd0cSMatthew G. Knepley ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr); 8854fcfd0cSMatthew G. Knepley ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr); 8954fcfd0cSMatthew G. Knepley ierr = DMPlexCheckPointSF(*dm);CHKERRQ(ierr); 9054fcfd0cSMatthew G. Knepley ierr = DMPlexCheckInterfaceCones(*dm);CHKERRQ(ierr); 91c4762a1bSJed Brown ierr = DMPlexSetRefinementUniform(*dm, PETSC_TRUE);CHKERRQ(ierr); 9296ca5757SLisandro Dalcin ierr = DMPlexSetCellRefinerType(*dm, DM_REFINER_TO_BOX);CHKERRQ(ierr); 9354fcfd0cSMatthew G. Knepley ierr = DMRefine(*dm, PETSC_COMM_WORLD, &dmConv);CHKERRQ(ierr); 94c4762a1bSJed Brown if (dmConv) { 95c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 96c4762a1bSJed Brown *dm = dmConv; 97c4762a1bSJed Brown } 9854fcfd0cSMatthew G. Knepley ierr = DMViewFromOptions(*dm,NULL,"-initref_dm_view");CHKERRQ(ierr); 9954fcfd0cSMatthew G. Knepley ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr); 10054fcfd0cSMatthew G. Knepley ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr); 10154fcfd0cSMatthew G. Knepley ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr); 10254fcfd0cSMatthew G. Knepley ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr); 10354fcfd0cSMatthew G. Knepley ierr = DMPlexCheckPointSF(*dm);CHKERRQ(ierr); 10454fcfd0cSMatthew G. Knepley ierr = DMPlexCheckInterfaceCones(*dm);CHKERRQ(ierr); 105c4762a1bSJed Brown 106c4762a1bSJed Brown ierr = DMConvert(*dm,dim == 2 ? DMP4EST : DMP8EST,&dmConv);CHKERRQ(ierr); 107c4762a1bSJed Brown if (dmConv) { 108c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_seq_1_");CHKERRQ(ierr); 109c4762a1bSJed Brown ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr); 110c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 111c4762a1bSJed Brown *dm = dmConv; 112c4762a1bSJed Brown } 113c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_seq_1_");CHKERRQ(ierr); 114c4762a1bSJed Brown ierr = DMSetUp(*dm);CHKERRQ(ierr); 115c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr); 116c4762a1bSJed Brown ierr = DMConvert(*dm,DMPLEX,&dmConv);CHKERRQ(ierr); 117c4762a1bSJed Brown if (dmConv) { 118c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_seq_2_");CHKERRQ(ierr); 119c4762a1bSJed Brown ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr); 120c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 121c4762a1bSJed Brown *dm = dmConv; 122c4762a1bSJed Brown } 123c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_seq_2_");CHKERRQ(ierr); 124c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr); 125c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr); 126c4762a1bSJed Brown #else 127c4762a1bSJed Brown SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Recompile with --download-p4est"); 128c4762a1bSJed Brown #endif 129c4762a1bSJed Brown } 130c4762a1bSJed Brown 131c4762a1bSJed Brown ierr = PetscLogStagePop();CHKERRQ(ierr); 132c4762a1bSJed Brown if (!testp4est_seq) { 133c4762a1bSJed Brown ierr = PetscLogStagePush(user->stages[STAGE_DISTRIBUTE]);CHKERRQ(ierr); 134c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_pre_dist_view");CHKERRQ(ierr); 13530602db0SMatthew G. Knepley ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "dist_");CHKERRQ(ierr); 13630602db0SMatthew G. Knepley ierr = DMSetFromOptions(*dm);CHKERRQ(ierr); 13730602db0SMatthew G. Knepley ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr); 138c4762a1bSJed Brown ierr = PetscLogStagePop();CHKERRQ(ierr); 139c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-distributed_dm_view");CHKERRQ(ierr); 140c4762a1bSJed Brown } 141c4762a1bSJed Brown ierr = PetscLogStagePush(user->stages[STAGE_REFINE]);CHKERRQ(ierr); 14230602db0SMatthew G. Knepley ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "ref_");CHKERRQ(ierr); 143c4762a1bSJed Brown ierr = DMSetFromOptions(*dm);CHKERRQ(ierr); 14430602db0SMatthew G. Knepley ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr); 145c4762a1bSJed Brown ierr = PetscLogStagePop();CHKERRQ(ierr); 146c4762a1bSJed Brown 147c4762a1bSJed Brown if (testp4est_par) { 148c4762a1bSJed Brown #if defined(PETSC_HAVE_P4EST) 149c4762a1bSJed Brown DM dmConv = NULL; 150c4762a1bSJed Brown 15196ca5757SLisandro Dalcin ierr = DMViewFromOptions(*dm, NULL, "-dm_tobox_view");CHKERRQ(ierr); 152c4762a1bSJed Brown ierr = DMPlexSetRefinementUniform(*dm, PETSC_TRUE);CHKERRQ(ierr); 15396ca5757SLisandro Dalcin ierr = DMPlexSetCellRefinerType(*dm, DM_REFINER_TO_BOX);CHKERRQ(ierr); 15454fcfd0cSMatthew G. Knepley ierr = DMRefine(*dm, PETSC_COMM_WORLD, &dmConv);CHKERRQ(ierr); 155c4762a1bSJed Brown if (dmConv) { 156c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 157c4762a1bSJed Brown *dm = dmConv; 158c4762a1bSJed Brown } 15996ca5757SLisandro Dalcin ierr = DMViewFromOptions(*dm, NULL, "-dm_tobox_view");CHKERRQ(ierr); 16054fcfd0cSMatthew G. Knepley ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr); 16154fcfd0cSMatthew G. Knepley ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr); 16254fcfd0cSMatthew G. Knepley ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr); 16354fcfd0cSMatthew G. Knepley ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr); 16454fcfd0cSMatthew G. Knepley ierr = DMPlexCheckPointSF(*dm);CHKERRQ(ierr); 16554fcfd0cSMatthew G. Knepley ierr = DMPlexCheckInterfaceCones(*dm);CHKERRQ(ierr); 166c4762a1bSJed Brown 167c4762a1bSJed Brown ierr = DMConvert(*dm,dim == 2 ? DMP4EST : DMP8EST,&dmConv);CHKERRQ(ierr); 168c4762a1bSJed Brown if (dmConv) { 169c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_par_1_");CHKERRQ(ierr); 170c4762a1bSJed Brown ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr); 171c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 172c4762a1bSJed Brown *dm = dmConv; 173c4762a1bSJed Brown } 174c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_par_1_");CHKERRQ(ierr); 175c4762a1bSJed Brown ierr = DMSetUp(*dm);CHKERRQ(ierr); 176c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr); 177c4762a1bSJed Brown ierr = DMConvert(*dm, DMPLEX, &dmConv);CHKERRQ(ierr); 178c4762a1bSJed Brown if (dmConv) { 179c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_par_2_");CHKERRQ(ierr); 180c4762a1bSJed Brown ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr); 181c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 182c4762a1bSJed Brown *dm = dmConv; 183c4762a1bSJed Brown } 184c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_par_2_");CHKERRQ(ierr); 185c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr); 186c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr); 187c4762a1bSJed Brown #else 188c4762a1bSJed Brown SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Recompile with --download-p4est"); 189c4762a1bSJed Brown #endif 190c4762a1bSJed Brown } 191c4762a1bSJed Brown 192c4762a1bSJed Brown /* test redistribution of an already distributed mesh */ 193c4762a1bSJed Brown if (user->redistribute) { 194c4762a1bSJed Brown DM distributedMesh; 1950a19bb7dSprj- PetscSF sf; 1960a19bb7dSprj- PetscInt nranks; 197c4762a1bSJed Brown 198c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_pre_redist_view");CHKERRQ(ierr); 199c4762a1bSJed Brown ierr = DMPlexDistribute(*dm, 0, NULL, &distributedMesh);CHKERRQ(ierr); 200c4762a1bSJed Brown if (distributedMesh) { 2010a19bb7dSprj- ierr = DMGetPointSF(distributedMesh, &sf);CHKERRQ(ierr); 2020a19bb7dSprj- ierr = PetscSFSetUp(sf);CHKERRQ(ierr); 2030a19bb7dSprj- ierr = DMGetNeighbors(distributedMesh, &nranks, NULL);CHKERRQ(ierr); 204ffc4695bSBarry Smith ierr = MPI_Allreduce(MPI_IN_PLACE, &nranks, 1, MPIU_INT, MPI_MIN, PetscObjectComm((PetscObject)*dm));CHKERRMPI(ierr); 2050a19bb7dSprj- ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)*dm)), "Minimum number of neighbors: %D\n", nranks);CHKERRQ(ierr); 206c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 207c4762a1bSJed Brown *dm = distributedMesh; 208c4762a1bSJed Brown } 209c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_post_redist_view");CHKERRQ(ierr); 210c4762a1bSJed Brown } 211c4762a1bSJed Brown 212c4762a1bSJed Brown if (user->overlap) { 213c4762a1bSJed Brown DM overlapMesh = NULL; 214c4762a1bSJed Brown 215c4762a1bSJed Brown /* Add the overlap to refined mesh */ 216c4762a1bSJed Brown ierr = PetscLogStagePush(user->stages[STAGE_OVERLAP]);CHKERRQ(ierr); 217c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_pre_overlap_view");CHKERRQ(ierr); 218c4762a1bSJed Brown ierr = DMPlexDistributeOverlap(*dm, user->overlap, NULL, &overlapMesh);CHKERRQ(ierr); 219c4762a1bSJed Brown if (overlapMesh) { 220c4762a1bSJed Brown PetscInt overlap; 221c4762a1bSJed Brown ierr = DMPlexGetOverlap(overlapMesh, &overlap);CHKERRQ(ierr); 222c4762a1bSJed Brown ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD, "Overlap: %D\n", overlap);CHKERRQ(ierr); 223c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 224c4762a1bSJed Brown *dm = overlapMesh; 225c4762a1bSJed Brown } 226c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_post_overlap_view");CHKERRQ(ierr); 227c4762a1bSJed Brown ierr = PetscLogStagePop();CHKERRQ(ierr); 228c4762a1bSJed Brown } 229c4762a1bSJed Brown if (user->final_ref) { 230c4762a1bSJed Brown DM refinedMesh = NULL; 231c4762a1bSJed Brown 232c4762a1bSJed Brown ierr = DMPlexSetRefinementUniform(*dm, PETSC_TRUE);CHKERRQ(ierr); 233c4762a1bSJed Brown ierr = DMRefine(*dm, comm, &refinedMesh);CHKERRQ(ierr); 234c4762a1bSJed Brown if (refinedMesh) { 235c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 236c4762a1bSJed Brown *dm = refinedMesh; 237c4762a1bSJed Brown } 238c4762a1bSJed Brown } 239c4762a1bSJed Brown 240c4762a1bSJed Brown ierr = PetscObjectSetName((PetscObject) *dm, "Simplicial Mesh");CHKERRQ(ierr); 241c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr); 242c4762a1bSJed Brown if (user->final_diagnostics) { 243c4762a1bSJed Brown DMPlexInterpolatedFlag interpolated; 244c4762a1bSJed Brown PetscInt dim, depth; 245c4762a1bSJed Brown 246c4762a1bSJed Brown ierr = DMGetDimension(*dm, &dim);CHKERRQ(ierr); 247c4762a1bSJed Brown ierr = DMPlexGetDepth(*dm, &depth);CHKERRQ(ierr); 248c4762a1bSJed Brown ierr = DMPlexIsInterpolatedCollective(*dm, &interpolated);CHKERRQ(ierr); 249c4762a1bSJed Brown 250c4762a1bSJed Brown ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr); 251c4762a1bSJed Brown if (interpolated == DMPLEX_INTERPOLATED_FULL) { 252c4762a1bSJed Brown ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr); 253c4762a1bSJed Brown } 254c4762a1bSJed Brown ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr); 255c4762a1bSJed Brown ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr); 256c4762a1bSJed Brown } 257c4762a1bSJed Brown ierr = PetscLogEventEnd(user->createMeshEvent,0,0,0,0);CHKERRQ(ierr); 258c4762a1bSJed Brown PetscFunctionReturn(0); 259c4762a1bSJed Brown } 260c4762a1bSJed Brown 261c4762a1bSJed Brown int main(int argc, char **argv) 262c4762a1bSJed Brown { 26330602db0SMatthew G. Knepley DM dm; 26430602db0SMatthew G. Knepley AppCtx user; 265c4762a1bSJed Brown PetscErrorCode ierr; 266c4762a1bSJed Brown 267c4762a1bSJed Brown ierr = PetscInitialize(&argc, &argv, NULL, help);if (ierr) return ierr; 268c4762a1bSJed Brown ierr = ProcessOptions(PETSC_COMM_WORLD, &user);CHKERRQ(ierr); 26930602db0SMatthew G. Knepley ierr = CreateMesh(PETSC_COMM_WORLD, &user, &dm);CHKERRQ(ierr); 27030602db0SMatthew G. Knepley ierr = DMDestroy(&dm);CHKERRQ(ierr); 271c4762a1bSJed Brown ierr = PetscFinalize(); 272c4762a1bSJed Brown return ierr; 273c4762a1bSJed Brown } 274c4762a1bSJed Brown 275c4762a1bSJed Brown /*TEST 276c4762a1bSJed Brown 277c4762a1bSJed Brown # CTetGen 0-1 278c4762a1bSJed Brown test: 279c4762a1bSJed Brown suffix: 0 280c4762a1bSJed Brown requires: ctetgen 28130602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_interpolate 0 -ctetgen_verbose 4 -dm_view ascii::ascii_info_detail -info :~sys 282c4762a1bSJed Brown test: 283c4762a1bSJed Brown suffix: 1 284c4762a1bSJed Brown requires: ctetgen 28530602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_interpolate 0 -ctetgen_verbose 4 -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail -info :~sys 286c4762a1bSJed Brown 287c4762a1bSJed Brown # 2D LaTex and ASCII output 2-9 288c4762a1bSJed Brown test: 289c4762a1bSJed Brown suffix: 2 290c4762a1bSJed Brown requires: triangle 29130602db0SMatthew G. Knepley args: -dm_plex_interpolate 0 -dm_view ascii::ascii_latex 292c4762a1bSJed Brown test: 293c4762a1bSJed Brown suffix: 3 294c4762a1bSJed Brown requires: triangle 29530602db0SMatthew G. Knepley args: -ref_dm_refine 1 -dm_view ascii::ascii_info_detail 296c4762a1bSJed Brown test: 297c4762a1bSJed Brown suffix: 4 298c4762a1bSJed Brown requires: triangle 299c4762a1bSJed Brown nsize: 2 30030602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_info_detail 301c4762a1bSJed Brown test: 302c4762a1bSJed Brown suffix: 5 303c4762a1bSJed Brown requires: triangle 304c4762a1bSJed Brown nsize: 2 30530602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_latex 306c4762a1bSJed Brown test: 307c4762a1bSJed Brown suffix: 6 30830602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_simplex 0 -dm_view ascii::ascii_info_detail 309c4762a1bSJed Brown test: 310c4762a1bSJed Brown suffix: 7 31130602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_simplex 0 -ref_dm_refine 1 -dm_view ascii::ascii_info_detail 312c4762a1bSJed Brown test: 313c4762a1bSJed Brown suffix: 8 314c4762a1bSJed Brown nsize: 2 31530602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_latex 316c4762a1bSJed Brown 317c4762a1bSJed Brown # 1D ASCII output 31830602db0SMatthew G. Knepley testset: 31930602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 1 -dm_view ascii::ascii_info_detail -dm_plex_check_all 320c4762a1bSJed Brown test: 321c4762a1bSJed Brown suffix: 1d_0 32230602db0SMatthew G. Knepley args: 323c4762a1bSJed Brown test: 324c4762a1bSJed Brown suffix: 1d_1 32530602db0SMatthew G. Knepley args: -ref_dm_refine 2 326c4762a1bSJed Brown test: 327c4762a1bSJed Brown suffix: 1d_2 32830602db0SMatthew G. Knepley args: -dm_plex_box_faces 5 -dm_plex_box_bd periodic 329c4762a1bSJed Brown 330c4762a1bSJed Brown # Parallel refinement tests with overlap 331c4762a1bSJed Brown test: 332c4762a1bSJed Brown suffix: refine_overlap_1d 333c4762a1bSJed Brown nsize: 2 33430602db0SMatthew G. Knepley args: -dm_plex_dim 1 -dim 1 -dm_plex_box_faces 4 -dm_plex_box_faces 4 -ref_dm_refine 1 -overlap {{0 1 2}separate output} -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_info 335c4762a1bSJed Brown test: 336c4762a1bSJed Brown suffix: refine_overlap_2d 337c4762a1bSJed Brown requires: triangle 338c4762a1bSJed Brown nsize: {{2 8}separate output} 33930602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -overlap {{0 1 2}separate output} -dm_view ascii::ascii_info 340c4762a1bSJed Brown 341c4762a1bSJed Brown # Parallel simple partitioner tests 342c4762a1bSJed Brown test: 343c4762a1bSJed Brown suffix: part_simple_0 344c4762a1bSJed Brown requires: triangle 345c4762a1bSJed Brown nsize: 2 34630602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_interpolate 0 -dist_dm_distribute -petscpartitioner_type simple -dist_partition_view -dm_view ascii::ascii_info_detail 347c4762a1bSJed Brown test: 348c4762a1bSJed Brown suffix: part_simple_1 349c4762a1bSJed Brown requires: triangle 350c4762a1bSJed Brown nsize: 8 35130602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dist_partition_view -dm_view ascii::ascii_info_detail 352c4762a1bSJed Brown 353c4762a1bSJed Brown # Parallel partitioner tests 354c4762a1bSJed Brown test: 355c4762a1bSJed Brown suffix: part_parmetis_0 356c4762a1bSJed Brown requires: parmetis 357c4762a1bSJed Brown nsize: 2 35830602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type parmetis -dm_view -petscpartitioner_view -test_redistribute -dm_plex_csr_via_mat {{0 1}} -dm_pre_redist_view ::load_balance -dm_post_redist_view ::load_balance -petscpartitioner_view_graph 359c4762a1bSJed Brown test: 360c4762a1bSJed Brown suffix: part_ptscotch_0 361c4762a1bSJed Brown requires: ptscotch 362c4762a1bSJed Brown nsize: 2 36330602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dist_dm_distribute -petscpartitioner_type ptscotch -petscpartitioner_view -petscpartitioner_ptscotch_strategy quality -test_redistribute -dm_plex_csr_via_mat {{0 1}} -dm_pre_redist_view ::load_balance -dm_post_redist_view ::load_balance -petscpartitioner_view_graph 364c4762a1bSJed Brown test: 365c4762a1bSJed Brown suffix: part_ptscotch_1 366c4762a1bSJed Brown requires: ptscotch 367c4762a1bSJed Brown nsize: 8 36830602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type ptscotch -petscpartitioner_view -petscpartitioner_ptscotch_imbalance 0.1 369c4762a1bSJed Brown 370c4762a1bSJed Brown # CGNS reader tests 10-11 (need to find smaller test meshes) 371c4762a1bSJed Brown test: 372c4762a1bSJed Brown suffix: cgns_0 373c4762a1bSJed Brown requires: cgns 37430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/tut21.cgns -dm_view 375c4762a1bSJed Brown 376c4762a1bSJed Brown # Gmsh mesh reader tests 37730602db0SMatthew G. Knepley testset: 37830602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view 37930602db0SMatthew G. Knepley 380c4762a1bSJed Brown test: 381c4762a1bSJed Brown suffix: gmsh_0 382c4762a1bSJed Brown requires: !single 38330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 384c4762a1bSJed Brown test: 385c4762a1bSJed Brown suffix: gmsh_1 386c4762a1bSJed Brown requires: !single 38730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.msh 388c4762a1bSJed Brown test: 389c4762a1bSJed Brown suffix: gmsh_2 390c4762a1bSJed Brown requires: !single 39130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh 392c4762a1bSJed Brown test: 393c4762a1bSJed Brown suffix: gmsh_3 394c4762a1bSJed Brown nsize: 3 395c4762a1bSJed Brown requires: !single 39630602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.msh -dist_dm_distribute -petscpartitioner_type simple 397c4762a1bSJed Brown test: 398c4762a1bSJed Brown suffix: gmsh_4 399c4762a1bSJed Brown nsize: 3 400c4762a1bSJed Brown requires: !single 40130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dist_dm_distribute -petscpartitioner_type simple 402c4762a1bSJed Brown test: 403c4762a1bSJed Brown suffix: gmsh_5 404c4762a1bSJed Brown requires: !single 40530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_quad.msh 406c4762a1bSJed Brown # TODO: it seems the mesh is not a valid gmsh (inverted cell) 407c4762a1bSJed Brown test: 408c4762a1bSJed Brown suffix: gmsh_6 409c4762a1bSJed Brown requires: !single 41030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin_physnames.msh -final_diagnostics 0 411c4762a1bSJed Brown test: 412c4762a1bSJed Brown suffix: gmsh_7 41330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_view ::ascii_info_detail -dm_plex_check_all 414c4762a1bSJed Brown test: 415c4762a1bSJed Brown suffix: gmsh_8 41630602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh -dm_view ::ascii_info_detail -dm_plex_check_all 417c4762a1bSJed Brown testset: 41830602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic_bin.msh -dm_view ::ascii_info_detail -dm_plex_check_all 419c4762a1bSJed Brown test: 420c4762a1bSJed Brown suffix: gmsh_9 421c4762a1bSJed Brown test: 422c4762a1bSJed Brown suffix: gmsh_9_periodic_0 423c4762a1bSJed Brown args: -dm_plex_gmsh_periodic 0 424c4762a1bSJed Brown testset: 42530602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view ::ascii_info_detail -dm_plex_check_all 426c4762a1bSJed Brown test: 427c4762a1bSJed Brown suffix: gmsh_10 428c4762a1bSJed Brown test: 429c4762a1bSJed Brown suffix: gmsh_10_periodic_0 430c4762a1bSJed Brown args: -dm_plex_gmsh_periodic 0 431c4762a1bSJed Brown testset: 43230602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view ::ascii_info_detail -dm_plex_check_all -ref_dm_refine 1 433c4762a1bSJed Brown test: 434c4762a1bSJed Brown suffix: gmsh_11 435c4762a1bSJed Brown test: 436c4762a1bSJed Brown suffix: gmsh_11_periodic_0 437c4762a1bSJed Brown args: -dm_plex_gmsh_periodic 0 438c4762a1bSJed Brown # TODO: it seems the mesh is not a valid gmsh (inverted cell) 439c4762a1bSJed Brown test: 440c4762a1bSJed Brown suffix: gmsh_12 441c4762a1bSJed Brown nsize: 4 442c4762a1bSJed Brown requires: !single mpiio 44330602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin_physnames.msh -viewer_binary_mpiio -dist_dm_distribute -petscpartitioner_type simple -dm_view -final_diagnostics 0 444c4762a1bSJed Brown test: 445c4762a1bSJed Brown suffix: gmsh_13_hybs2t 446c4762a1bSJed Brown nsize: 4 44730602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh -dist_dm_distribute -petscpartitioner_type simple -dm_view -ref_dm_refine 1 -ref_dm_plex_cell_refiner tobox -dm_plex_check_all 448c4762a1bSJed Brown test: 449c4762a1bSJed Brown suffix: gmsh_14_ext 450c4762a1bSJed Brown requires: !single 45130602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude_layers 2 -dm_extrude_thickness 1.5 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dm_view -dm_plex_check_all 452c4762a1bSJed Brown test: 453c4762a1bSJed Brown suffix: gmsh_14_ext_s2t 454c4762a1bSJed Brown requires: !single 45530602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude_layers 2 -dm_extrude_thickness 1.5 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_cell_refiner tobox 456c4762a1bSJed Brown test: 457c4762a1bSJed Brown suffix: gmsh_15_hyb3d 45830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view -dm_plex_check_all 459c4762a1bSJed Brown test: 460c4762a1bSJed Brown suffix: gmsh_15_hyb3d_vtk 46130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view vtk: -dm_plex_gmsh_hybrid -dm_plex_check_all 462c4762a1bSJed Brown test: 463c4762a1bSJed Brown suffix: gmsh_15_hyb3d_s2t 46430602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_cell_refiner tobox 465c4762a1bSJed Brown test: 466c4762a1bSJed Brown suffix: gmsh_16_spheresurface 467c4762a1bSJed Brown nsize : 4 46830602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 469c4762a1bSJed Brown test: 470c4762a1bSJed Brown suffix: gmsh_16_spheresurface_s2t 471c4762a1bSJed Brown nsize : 4 47230602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -ref_dm_refine 1 -ref_dm_plex_cell_refiner tobox -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 473c4762a1bSJed Brown test: 474c4762a1bSJed Brown suffix: gmsh_16_spheresurface_extruded 475c4762a1bSJed Brown nsize : 4 47630602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude_layers 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 477c4762a1bSJed Brown test: 478c4762a1bSJed Brown suffix: gmsh_16_spheresurface_extruded_s2t 479c4762a1bSJed Brown nsize : 4 48030602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude_layers 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -ref_dm_refine 1 -ref_dm_plex_cell_refiner tobox -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 481c4762a1bSJed Brown test: 482c4762a1bSJed Brown suffix: gmsh_17_hyb3d_interp_ascii 48330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_hexwedge.msh -dm_view -dm_plex_check_all 484c4762a1bSJed Brown test: 485c4762a1bSJed Brown suffix: exodus_17_hyb3d_interp_ascii 486c4762a1bSJed Brown requires: exodusii 48730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_hexwedge.exo -dm_view -dm_plex_check_all 488c4762a1bSJed Brown 489c4762a1bSJed Brown # Legacy Gmsh v22/v40 ascii/binary reader tests 490c4762a1bSJed Brown testset: 491c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_legacy.out 49230602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all 493c4762a1bSJed Brown test: 494c4762a1bSJed Brown suffix: gmsh_3d_ascii_v22 49530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh2 496c4762a1bSJed Brown test: 497c4762a1bSJed Brown suffix: gmsh_3d_ascii_v40 49830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh4 499c4762a1bSJed Brown test: 500c4762a1bSJed Brown suffix: gmsh_3d_binary_v22 50130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary.msh2 502c4762a1bSJed Brown test: 503c4762a1bSJed Brown suffix: gmsh_3d_binary_v40 504c4762a1bSJed Brown requires: long64 50530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary.msh4 506c4762a1bSJed Brown 507c4762a1bSJed Brown # Gmsh v41 ascii/binary reader tests 508c4762a1bSJed Brown testset: # 32bit mesh, sequential 50930602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all 510c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_32.out 511c4762a1bSJed Brown test: 512c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_32 51330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-32.msh 514c4762a1bSJed Brown test: 515c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32 51630602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh 517c4762a1bSJed Brown test: 518c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32_mpiio 519c4762a1bSJed Brown requires: define(PETSC_HAVE_MPIIO) 52030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh -viewer_binary_mpiio 521c4762a1bSJed Brown testset: # 32bit mesh, parallel 52230602db0SMatthew G. Knepley args: -dm_coord_space 0 -dist_dm_distribute -petscpartitioner_type simple -dm_view ::ascii_info_detail -dm_plex_check_all 523c4762a1bSJed Brown nsize: 2 524c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_32_np2.out 525c4762a1bSJed Brown test: 526c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_32_np2 52730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-32.msh 528c4762a1bSJed Brown test: 529c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32_np2 53030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh 531c4762a1bSJed Brown test: 532c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32_np2_mpiio 533c4762a1bSJed Brown requires: define(PETSC_HAVE_MPIIO) 53430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh -viewer_binary_mpiio 535c4762a1bSJed Brown testset: # 64bit mesh, sequential 53630602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all 537c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_64.out 538c4762a1bSJed Brown test: 539c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_64 54030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-64.msh 541c4762a1bSJed Brown test: 542c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64 54330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh 544c4762a1bSJed Brown test: 545c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64_mpiio 546c4762a1bSJed Brown requires: define(PETSC_HAVE_MPIIO) 54730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh -viewer_binary_mpiio 548c4762a1bSJed Brown testset: # 64bit mesh, parallel 54930602db0SMatthew G. Knepley args: -dm_coord_space 0 -dist_dm_distribute -petscpartitioner_type simple -dm_view ::ascii_info_detail -dm_plex_check_all 550c4762a1bSJed Brown nsize: 2 551c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_64_np2.out 552c4762a1bSJed Brown test: 553c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_64_np2 55430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-64.msh 555c4762a1bSJed Brown test: 556c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64_np2 55730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh 558c4762a1bSJed Brown test: 559c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64_np2_mpiio 560c4762a1bSJed Brown requires: define(PETSC_HAVE_MPIIO) 56130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh -viewer_binary_mpiio 562c4762a1bSJed Brown 563c4762a1bSJed Brown # Fluent mesh reader tests 564c4762a1bSJed Brown # TODO: Geometry checks fail 565c4762a1bSJed Brown test: 566c4762a1bSJed Brown suffix: fluent_0 567c4762a1bSJed Brown requires: !complex 56830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.cas -dm_view -final_diagnostics 0 569c4762a1bSJed Brown test: 570c4762a1bSJed Brown suffix: fluent_1 571c4762a1bSJed Brown nsize: 3 572c4762a1bSJed Brown requires: !complex 57330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.cas -dist_dm_distribute -petscpartitioner_type simple -dm_view -final_diagnostics 0 574c4762a1bSJed Brown test: 575c4762a1bSJed Brown suffix: fluent_2 576c4762a1bSJed Brown requires: !complex 57730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cube_5tets_ascii.cas -dm_view -final_diagnostics 0 578c4762a1bSJed Brown test: 579c4762a1bSJed Brown suffix: fluent_3 580c4762a1bSJed Brown requires: !complex 581c4762a1bSJed Brown TODO: Fails on non-linux: fseek(), fileno() ? https://gitlab.com/petsc/petsc/merge_requests/2206#note_238166382 58230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cube_5tets.cas -dm_view -final_diagnostics 0 583c4762a1bSJed Brown 584c4762a1bSJed Brown # Med mesh reader tests, including parallel file reads 585c4762a1bSJed Brown test: 586c4762a1bSJed Brown suffix: med_0 587c4762a1bSJed Brown requires: med 58830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.med -dm_view 589c4762a1bSJed Brown test: 590c4762a1bSJed Brown suffix: med_1 591c4762a1bSJed Brown requires: med 592c4762a1bSJed Brown nsize: 3 59330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.med -dist_dm_distribute -petscpartitioner_type simple -dm_view 594c4762a1bSJed Brown test: 595c4762a1bSJed Brown suffix: med_2 596c4762a1bSJed Brown requires: med 59730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cylinder.med -dm_view 598c4762a1bSJed Brown test: 599c4762a1bSJed Brown suffix: med_3 600c4762a1bSJed Brown requires: med 601c4762a1bSJed Brown TODO: MED 602c4762a1bSJed Brown nsize: 3 60330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cylinder.med -dist_dm_distribute -petscpartitioner_type simple -dm_view 604c4762a1bSJed Brown 605c4762a1bSJed Brown # Test shape quality 606c4762a1bSJed Brown test: 607c4762a1bSJed Brown suffix: test_shape 608c4762a1bSJed Brown requires: ctetgen 60930602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dim 3 -dm_refine_hierarchy 3 -dm_plex_check_all -dm_plex_check_cell_shape 610c4762a1bSJed Brown 611c4762a1bSJed Brown # Test simplex to tensor conversion 612c4762a1bSJed Brown test: 613c4762a1bSJed Brown suffix: s2t2 614c4762a1bSJed Brown requires: triangle 61530602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -ref_dm_plex_cell_refiner tobox -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail 616c4762a1bSJed Brown 617c4762a1bSJed Brown test: 618c4762a1bSJed Brown suffix: s2t3 619c4762a1bSJed Brown requires: ctetgen 62030602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -ref_dm_refine 1 -ref_dm_plex_cell_refiner tobox -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail 621c4762a1bSJed Brown 62230602db0SMatthew G. Knepley # Test cylinder 62330602db0SMatthew G. Knepley testset: 62430602db0SMatthew G. Knepley args: -dm_plex_shape cylinder -dm_plex_check_all -dm_view 625c4762a1bSJed Brown test: 626c4762a1bSJed Brown suffix: cylinder 62730602db0SMatthew G. Knepley args: -ref_dm_refine 1 628c4762a1bSJed Brown test: 629c4762a1bSJed Brown suffix: cylinder_per 63061a622f3SMatthew G. Knepley args: -dm_plex_cylinder_bd periodic -ref_dm_refine 1 -ref_dm_refine_remap 0 631c4762a1bSJed Brown test: 632c4762a1bSJed Brown suffix: cylinder_wedge 63361a622f3SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_interpolate 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk: 634c4762a1bSJed Brown test: 635c4762a1bSJed Brown suffix: cylinder_wedge_int 636c4762a1bSJed Brown output_file: output/ex1_cylinder_wedge.out 63761a622f3SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk: 638c4762a1bSJed Brown 639c4762a1bSJed Brown test: 640c4762a1bSJed Brown suffix: box_2d 64130602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 2 -dm_plex_check_all -dm_view 642c4762a1bSJed Brown 643c4762a1bSJed Brown test: 644c4762a1bSJed Brown suffix: box_2d_per 64530602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 2 -dm_plex_check_all -dm_view 646c4762a1bSJed Brown 647c4762a1bSJed Brown test: 648c4762a1bSJed Brown suffix: box_2d_per_unint 64930602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_simplex 0 -dm_plex_interpolate 0 -dm_plex_box_faces 3,3 -dm_plex_box_faces 3,3 -dm_plex_check_all -dm_view ::ascii_info_detail 650c4762a1bSJed Brown 651c4762a1bSJed Brown test: 652c4762a1bSJed Brown suffix: box_3d 65330602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dim 3 -dm_plex_simplex 0 -ref_dm_refine 3 -dm_plex_check_all -dm_view 654c4762a1bSJed Brown 655c4762a1bSJed Brown test: 656c4762a1bSJed Brown requires: triangle 657c4762a1bSJed Brown suffix: box_wedge 65861a622f3SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_simplex 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk: -dm_plex_check_all 659c4762a1bSJed Brown 660c4762a1bSJed Brown testset: 661c4762a1bSJed Brown requires: triangle 66261a622f3SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_cell tensor_triangular_prism -dm_plex_box_faces 2,3,1 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_cell_refiner tobox 663c4762a1bSJed Brown test: 664c4762a1bSJed Brown suffix: box_wedge_s2t 665c4762a1bSJed Brown test: 666c4762a1bSJed Brown nsize: 3 66730602db0SMatthew G. Knepley args: -dist_dm_distribute -petscpartitioner_type simple 668c4762a1bSJed Brown suffix: box_wedge_s2t_parallel 669c4762a1bSJed Brown 670c4762a1bSJed Brown # Test GLVis output 67130602db0SMatthew G. Knepley testset: 67230602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_interpolate 0 673c4762a1bSJed Brown test: 674c4762a1bSJed Brown suffix: glvis_2d_tet 67530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_plex_gmsh_periodic 0 -dm_view glvis: 676c4762a1bSJed Brown test: 677c4762a1bSJed Brown suffix: glvis_2d_tet_per 67830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 0 679c4762a1bSJed Brown test: 680c4762a1bSJed Brown suffix: glvis_3d_tet 68130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_plex_gmsh_periodic 0 -dm_view glvis: 68230602db0SMatthew G. Knepley testset: 68330602db0SMatthew G. Knepley args: -dm_coord_space 0 68430602db0SMatthew G. Knepley test: 68530602db0SMatthew G. Knepley suffix: glvis_2d_tet_per_mfem 68630602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem -dm_view glvis: 68730602db0SMatthew G. Knepley test: 68830602db0SMatthew G. Knepley suffix: glvis_2d_quad 68930602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_view glvis: 69030602db0SMatthew G. Knepley test: 69130602db0SMatthew G. Knepley suffix: glvis_2d_quad_per 69230602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_plex_box_bd periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 69330602db0SMatthew G. Knepley test: 69430602db0SMatthew G. Knepley suffix: glvis_2d_quad_per_mfem 69530602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_plex_box_bd periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem 696c4762a1bSJed Brown test: 697c4762a1bSJed Brown suffix: glvis_3d_tet_per 69830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 699c4762a1bSJed Brown test: 700c4762a1bSJed Brown suffix: glvis_3d_tet_per_mfem 701c4762a1bSJed Brown TODO: broken 70230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -viewer_glvis_dm_plex_enable_mfem -dm_view glvis: 703c4762a1bSJed Brown test: 704c4762a1bSJed Brown suffix: glvis_3d_hex 70530602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_view glvis: 706c4762a1bSJed Brown test: 707c4762a1bSJed Brown suffix: glvis_3d_hex_per 70830602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_plex_box_bd periodic,periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 0 709c4762a1bSJed Brown test: 710c4762a1bSJed Brown suffix: glvis_3d_hex_per_mfem 71130602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_plex_box_bd periodic,periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem 71230602db0SMatthew G. Knepley test: 71330602db0SMatthew G. Knepley suffix: glvis_2d_hyb 71430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 71530602db0SMatthew G. Knepley test: 71630602db0SMatthew G. Knepley suffix: glvis_3d_hyb 71730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 71830602db0SMatthew G. Knepley test: 71930602db0SMatthew G. Knepley suffix: glvis_3d_hyb_s2t 72030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_3d_cube.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -ref_dm_refine 1 -ref_dm_plex_cell_refiner tobox -dm_plex_check_all 721c4762a1bSJed Brown 722c4762a1bSJed Brown # Test P4EST 723c4762a1bSJed Brown testset: 724c4762a1bSJed Brown requires: p4est 72530602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view -test_p4est_seq -conv_seq_2_dm_plex_check_all -conv_seq_1_dm_forest_minimum_refinement 1 726c4762a1bSJed Brown test: 727c4762a1bSJed Brown suffix: p4est_periodic 72830602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash 729c4762a1bSJed Brown test: 730c4762a1bSJed Brown suffix: p4est_periodic_3d 73130602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,none -dm_plex_box_faces 3,5,4 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash 732c4762a1bSJed Brown test: 733c4762a1bSJed Brown suffix: p4est_gmsh_periodic 73430602db0SMatthew G. Knepley args: -dm_coord_space 0 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh 735c4762a1bSJed Brown test: 736c4762a1bSJed Brown suffix: p4est_gmsh_surface 73730602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 738c4762a1bSJed Brown test: 739c4762a1bSJed Brown suffix: p4est_gmsh_surface_parallel 740c4762a1bSJed Brown nsize: 2 74130602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -petscpartitioner_type simple -dm_view ::load_balance 742c4762a1bSJed Brown test: 743c4762a1bSJed Brown suffix: p4est_hyb_2d 74430602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh 745c4762a1bSJed Brown test: 746c4762a1bSJed Brown suffix: p4est_hyb_3d 74730602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh 748c4762a1bSJed Brown test: 749c4762a1bSJed Brown requires: ctetgen 750c4762a1bSJed Brown suffix: p4est_s2t_bugfaces_3d 75130602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 0 -dm_plex_dim 3 -dm_plex_box_faces 1,1 752c4762a1bSJed Brown test: 753c4762a1bSJed Brown suffix: p4est_bug_overlapsf 754c4762a1bSJed Brown nsize: 3 75530602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 2,2,1 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple 756c4762a1bSJed Brown test: 757c4762a1bSJed Brown suffix: p4est_redistribute 758c4762a1bSJed Brown nsize: 3 75930602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 2,2,1 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple -test_redistribute -dm_plex_csr_via_mat {{0 1}} -dm_view ::load_balance 760c4762a1bSJed Brown test: 761c4762a1bSJed Brown suffix: p4est_gmsh_s2t_3d 76230602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 763c4762a1bSJed Brown test: 764c4762a1bSJed Brown suffix: p4est_gmsh_s2t_3d_hash 76530602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 1 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 766c4762a1bSJed Brown test: 767c4762a1bSJed Brown requires: long_runtime 768c4762a1bSJed Brown suffix: p4est_gmsh_periodic_3d 76930602db0SMatthew G. Knepley args: -dm_coord_space 0 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh 770c4762a1bSJed Brown 771c4762a1bSJed Brown testset: 772c4762a1bSJed Brown requires: p4est 773c4762a1bSJed Brown nsize: 6 77430602db0SMatthew G. Knepley args: -dm_coord_space 0 -test_p4est_par -conv_par_2_dm_plex_check_all -conv_par_1_dm_forest_minimum_refinement 1 -conv_par_1_dm_forest_partition_overlap 0 -dist_dm_distribute 775c4762a1bSJed Brown test: 77654fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 777c4762a1bSJed Brown suffix: p4est_par_periodic 77830602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash 779c4762a1bSJed Brown test: 78054fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 781c4762a1bSJed Brown suffix: p4est_par_periodic_3d 78230602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,periodic -dm_plex_box_faces 3,5,4 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash 783c4762a1bSJed Brown test: 78454fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 785c4762a1bSJed Brown suffix: p4est_par_gmsh_periodic 78630602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh 787c4762a1bSJed Brown test: 788c4762a1bSJed Brown suffix: p4est_par_gmsh_surface 78930602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 790c4762a1bSJed Brown test: 791c4762a1bSJed Brown suffix: p4est_par_gmsh_s2t_3d 79230602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 793c4762a1bSJed Brown test: 79454fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 795c4762a1bSJed Brown suffix: p4est_par_gmsh_s2t_3d_hash 79630602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 797c4762a1bSJed Brown test: 798c4762a1bSJed Brown requires: long_runtime 799c4762a1bSJed Brown suffix: p4est_par_gmsh_periodic_3d 80030602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh 801c4762a1bSJed Brown 802c4762a1bSJed Brown testset: 803c4762a1bSJed Brown requires: p4est 804c4762a1bSJed Brown nsize: 6 80530602db0SMatthew G. Knepley args: -dm_coord_space 0 -test_p4est_par -conv_par_2_dm_plex_check_all -conv_par_1_dm_forest_minimum_refinement 1 -conv_par_1_dm_forest_partition_overlap 1 -dist_dm_distribute -petscpartitioner_type simple 806c4762a1bSJed Brown test: 807c4762a1bSJed Brown suffix: p4est_par_ovl_periodic 80830602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash 809c4762a1bSJed Brown #TODO Mesh cell 201 is inverted, vol = 0. (FVM Volume. Is it correct? -> Diagnostics disabled) 810c4762a1bSJed Brown test: 811c4762a1bSJed Brown suffix: p4est_par_ovl_periodic_3d 81230602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,none -dm_plex_box_faces 3,5,4 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -final_diagnostics 0 813c4762a1bSJed Brown test: 814c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_periodic 81530602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh 816c4762a1bSJed Brown test: 817c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_surface 81830602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 819c4762a1bSJed Brown test: 820c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_s2t_3d 82130602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 822c4762a1bSJed Brown test: 823c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_s2t_3d_hash 82430602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 825c4762a1bSJed Brown test: 826c4762a1bSJed Brown requires: long_runtime 827c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_periodic_3d 82830602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh 829c4762a1bSJed Brown test: 830c4762a1bSJed Brown suffix: p4est_par_ovl_hyb_2d 83130602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh 832c4762a1bSJed Brown test: 833c4762a1bSJed Brown suffix: p4est_par_ovl_hyb_3d 83430602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh 835c4762a1bSJed Brown 836c4762a1bSJed Brown test: 837c4762a1bSJed Brown TODO: broken 838c4762a1bSJed Brown requires: p4est 839c4762a1bSJed Brown nsize: 2 840c4762a1bSJed Brown suffix: p4est_bug_labels_noovl 84130602db0SMatthew G. Knepley args: -test_p4est_seq -dm_plex_check_all -dm_forest_minimum_refinement 0 -dm_forest_partition_overlap 1 -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_forest_initial_refinement 0 -dm_forest_maximum_refinement 2 -dm_p4est_refine_pattern hash -dist_dm_distribute -petscpartitioner_type simple -dm_forest_print_label_error 842c4762a1bSJed Brown 843c4762a1bSJed Brown test: 844c4762a1bSJed Brown requires: p4est 845c4762a1bSJed Brown nsize: 2 846c4762a1bSJed Brown suffix: p4est_bug_distribute_overlap 84730602db0SMatthew G. Knepley args: -dm_coord_space 0 -test_p4est_seq -conv_seq_2_dm_plex_check_all -conv_seq_1_dm_forest_minimum_refinement 0 -conv_seq_1_dm_forest_partition_overlap 0 -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple -overlap 1 -dm_view ::load_balance 848c4762a1bSJed Brown args: -dm_post_overlap_view 849c4762a1bSJed Brown 850c4762a1bSJed Brown test: 851595782ffSMatthew G. Knepley suffix: ref_alfeld2d_0 852595782ffSMatthew G. Knepley requires: triangle 85330602db0SMatthew G. Knepley args: -dm_plex_box_faces 5,3 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_cell_refiner alfeld2d -final_diagnostics 854595782ffSMatthew G. Knepley test: 855595782ffSMatthew G. Knepley suffix: ref_alfeld3d_0 856595782ffSMatthew G. Knepley requires: ctetgen 85730602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_box_faces 5,1,1 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_cell_refiner alfeld3d -final_diagnostics 858595782ffSMatthew G. Knepley 85909c713e7SStefano Zampini # Boundary layer refiners 86009c713e7SStefano Zampini test: 86109c713e7SStefano Zampini suffix: ref_bl_1 86230602db0SMatthew G. Knepley args: -dm_plex_dim 1 -dm_plex_simplex 0 -dm_plex_box_faces 5,1 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_cell_refiner boundarylayer -dm_extrude_layers 2 -final_diagnostics -ref_dm_plex_refine_boundarylayer_splits 3 -dm_extrude_column_first {{0 1}} 86309c713e7SStefano Zampini test: 86409c713e7SStefano Zampini suffix: ref_bl_2_tri 86509c713e7SStefano Zampini requires: triangle 86630602db0SMatthew G. Knepley args: -dm_plex_box_faces 5,3 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_cell_refiner boundarylayer -dm_extrude_layers 3 -final_diagnostics -ref_dm_plex_refine_boundarylayer_splits 4 -dm_extrude_column_first {{0 1}} 86709c713e7SStefano Zampini test: 86809c713e7SStefano Zampini suffix: ref_bl_3_quad 86930602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 5,1 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_cell_refiner boundarylayer -dm_extrude_layers 3 -final_diagnostics -ref_dm_plex_refine_boundarylayer_splits 4 -dm_extrude_column_first {{0 1}} 87009c713e7SStefano Zampini test: 87109c713e7SStefano Zampini suffix: ref_bl_spheresurface_extruded 87209c713e7SStefano Zampini nsize : 4 87330602db0SMatthew G. Knepley args: -dm_extrude_layers 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple -dm_extrude_column_first {{0 1}separate output} -final_diagnostics -ref_dm_refine 1 -ref_dm_plex_cell_refiner boundarylayer -ref_dm_plex_refine_boundarylayer_splits 2 87409c713e7SStefano Zampini test: 87509c713e7SStefano Zampini suffix: ref_bl_3d_hyb 87609c713e7SStefano Zampini nsize : 4 87730602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_3d_cube.msh -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple -final_diagnostics -ref_dm_refine 1 -ref_dm_plex_cell_refiner boundarylayer -ref_dm_plex_refine_boundarylayer_splits 4 -ref_dm_plex_refine_boundarylayer_progression 3.1 8780e278f6aSMatthew G. Knepley 87930602db0SMatthew G. Knepley testset: 88030602db0SMatthew G. Knepley args: -dm_plex_shape sphere -dm_plex_check_all -dm_view 8810e278f6aSMatthew G. Knepley test: 8820e278f6aSMatthew G. Knepley suffix: sphere_0 88330602db0SMatthew G. Knepley args: 8840e278f6aSMatthew G. Knepley test: 8850e278f6aSMatthew G. Knepley suffix: sphere_1 88630602db0SMatthew G. Knepley args: -ref_dm_refine 2 8870e278f6aSMatthew G. Knepley test: 88868317524SMatthew G. Knepley suffix: sphere_2 88930602db0SMatthew G. Knepley args: -dm_plex_simplex 0 89068317524SMatthew G. Knepley test: 89168317524SMatthew G. Knepley suffix: sphere_3 89230602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 2 89368317524SMatthew G. Knepley 89468317524SMatthew G. Knepley test: 8950e278f6aSMatthew G. Knepley suffix: ball_0 8960e278f6aSMatthew G. Knepley requires: ctetgen 89730602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_shape ball -dm_plex_check_all -dm_view 8980e278f6aSMatthew G. Knepley 8990e278f6aSMatthew G. Knepley test: 9000e278f6aSMatthew G. Knepley suffix: ball_1 9010e278f6aSMatthew G. Knepley requires: ctetgen 90230602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_shape ball -bd_dm_refine 2 -dm_plex_check_all -dm_view 9030e278f6aSMatthew G. Knepley 904c4762a1bSJed Brown TEST*/ 905