xref: /petsc/src/dm/impls/plex/tests/ex1.c (revision 3fb88a6b54d0aa3dc7cfda3ddf10e715de1eb059)
1c4762a1bSJed Brown static char help[] = "Tests various DMPlex routines to construct, refine and distribute a mesh.\n\n";
2c4762a1bSJed Brown 
3c4762a1bSJed Brown #include <petscdmplex.h>
4012bc364SMatthew G. Knepley #include <petscdmplextransform.h>
50a19bb7dSprj- #include <petscsf.h>
6c4762a1bSJed Brown 
7c4762a1bSJed Brown enum {STAGE_LOAD, STAGE_DISTRIBUTE, STAGE_REFINE, STAGE_OVERLAP};
8c4762a1bSJed Brown 
9c4762a1bSJed Brown typedef struct {
10c4762a1bSJed Brown   PetscLogEvent createMeshEvent;
11c4762a1bSJed Brown   PetscLogStage stages[4];
12c4762a1bSJed Brown   /* Domain and mesh definition */
13c4762a1bSJed Brown   PetscInt      dim;                             /* The topological mesh dimension */
14c4762a1bSJed Brown   PetscInt      overlap;                         /* The cell overlap to use during partitioning */
15c4762a1bSJed Brown   PetscBool     testp4est[2];
16c4762a1bSJed Brown   PetscBool     redistribute;
17c4762a1bSJed Brown   PetscBool     final_ref;                       /* Run refinement at the end */
18c4762a1bSJed Brown   PetscBool     final_diagnostics;               /* Run diagnostics on the final mesh */
19c4762a1bSJed Brown } AppCtx;
20c4762a1bSJed Brown 
21c4762a1bSJed Brown PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options)
22c4762a1bSJed Brown {
23c4762a1bSJed Brown   PetscErrorCode ierr;
24c4762a1bSJed Brown 
25c4762a1bSJed Brown   PetscFunctionBegin;
26c4762a1bSJed Brown   options->dim               = 2;
27c4762a1bSJed Brown   options->overlap           = 0;
28c4762a1bSJed Brown   options->testp4est[0]      = PETSC_FALSE;
29c4762a1bSJed Brown   options->testp4est[1]      = PETSC_FALSE;
30c4762a1bSJed Brown   options->redistribute      = PETSC_FALSE;
31c4762a1bSJed Brown   options->final_ref         = PETSC_FALSE;
32c4762a1bSJed Brown   options->final_diagnostics = PETSC_TRUE;
33c4762a1bSJed Brown 
34c4762a1bSJed Brown   ierr = PetscOptionsBegin(comm, "", "Meshing Problem Options", "DMPLEX");CHKERRQ(ierr);
35c4762a1bSJed Brown   ierr = PetscOptionsRangeInt("-dim", "The topological mesh dimension", "ex1.c", options->dim, &options->dim, NULL,1,3);CHKERRQ(ierr);
36c4762a1bSJed Brown   ierr = PetscOptionsBoundedInt("-overlap", "The cell overlap for partitioning", "ex1.c", options->overlap, &options->overlap, NULL,0);CHKERRQ(ierr);
37c4762a1bSJed Brown   ierr = PetscOptionsBool("-test_p4est_seq", "Test p4est with sequential base DM", "ex1.c", options->testp4est[0], &options->testp4est[0], NULL);CHKERRQ(ierr);
38c4762a1bSJed Brown   ierr = PetscOptionsBool("-test_p4est_par", "Test p4est with parallel base DM", "ex1.c", options->testp4est[1], &options->testp4est[1], NULL);CHKERRQ(ierr);
39c4762a1bSJed Brown   ierr = PetscOptionsBool("-test_redistribute", "Test redistribution", "ex1.c", options->redistribute, &options->redistribute, NULL);CHKERRQ(ierr);
40c4762a1bSJed Brown   ierr = PetscOptionsBool("-final_ref", "Run uniform refinement on the final mesh", "ex1.c", options->final_ref, &options->final_ref, NULL);CHKERRQ(ierr);
41c4762a1bSJed Brown   ierr = PetscOptionsBool("-final_diagnostics", "Run diagnostics on the final mesh", "ex1.c", options->final_diagnostics, &options->final_diagnostics, NULL);CHKERRQ(ierr);
421e1ea65dSPierre Jolivet   ierr = PetscOptionsEnd();CHKERRQ(ierr);
43c4762a1bSJed Brown 
44c4762a1bSJed Brown   ierr = PetscLogEventRegister("CreateMesh", DM_CLASSID, &options->createMeshEvent);CHKERRQ(ierr);
45c4762a1bSJed Brown   ierr = PetscLogStageRegister("MeshLoad",       &options->stages[STAGE_LOAD]);CHKERRQ(ierr);
46c4762a1bSJed Brown   ierr = PetscLogStageRegister("MeshDistribute", &options->stages[STAGE_DISTRIBUTE]);CHKERRQ(ierr);
47c4762a1bSJed Brown   ierr = PetscLogStageRegister("MeshRefine",     &options->stages[STAGE_REFINE]);CHKERRQ(ierr);
48c4762a1bSJed Brown   ierr = PetscLogStageRegister("MeshOverlap",    &options->stages[STAGE_OVERLAP]);CHKERRQ(ierr);
49c4762a1bSJed Brown   PetscFunctionReturn(0);
50c4762a1bSJed Brown }
51c4762a1bSJed Brown 
52c4762a1bSJed Brown PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm)
53c4762a1bSJed Brown {
54c4762a1bSJed Brown   PetscInt       dim           = user->dim;
55c4762a1bSJed Brown   PetscBool      testp4est_seq = user->testp4est[0];
56c4762a1bSJed Brown   PetscBool      testp4est_par = user->testp4est[1];
57c4762a1bSJed Brown   PetscMPIInt    rank, size;
58db2bf62eSStefano Zampini   PetscBool      periodic;
59c4762a1bSJed Brown   PetscErrorCode ierr;
60c4762a1bSJed Brown 
61c4762a1bSJed Brown   PetscFunctionBegin;
62c4762a1bSJed Brown   ierr = PetscLogEventBegin(user->createMeshEvent,0,0,0,0);CHKERRQ(ierr);
63ffc4695bSBarry Smith   ierr = MPI_Comm_rank(comm, &rank);CHKERRMPI(ierr);
64ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm, &size);CHKERRMPI(ierr);
65c4762a1bSJed Brown   ierr = PetscLogStagePush(user->stages[STAGE_LOAD]);CHKERRQ(ierr);
6630602db0SMatthew G. Knepley   ierr = DMCreate(comm, dm);CHKERRQ(ierr);
6730602db0SMatthew G. Knepley   ierr = DMSetType(*dm, DMPLEX);CHKERRQ(ierr);
68e600fa54SMatthew G. Knepley   ierr = DMPlexDistributeSetDefault(*dm, PETSC_FALSE);CHKERRQ(ierr);
6930602db0SMatthew G. Knepley   ierr = DMSetFromOptions(*dm);CHKERRQ(ierr);
70db2bf62eSStefano Zampini 
71db2bf62eSStefano Zampini   /* For topologically periodic meshes, we first localize coordinates,
72db2bf62eSStefano Zampini      and then remove any information related with the
73db2bf62eSStefano Zampini      automatic computation of localized vertices.
74db2bf62eSStefano Zampini      This way, refinement operations and conversions to p4est
75db2bf62eSStefano Zampini      will preserve the shape of the domain in physical space */
76db2bf62eSStefano Zampini   ierr = DMLocalizeCoordinates(*dm);CHKERRQ(ierr);
77db2bf62eSStefano Zampini   ierr = DMGetPeriodicity(*dm, &periodic, NULL, NULL, NULL);CHKERRQ(ierr);
7830602db0SMatthew G. Knepley   if (periodic) {ierr = DMSetPeriodicity(*dm, PETSC_TRUE, NULL, NULL, NULL);CHKERRQ(ierr);}
79db2bf62eSStefano Zampini 
80c4762a1bSJed Brown   ierr = DMViewFromOptions(*dm,NULL,"-init_dm_view");CHKERRQ(ierr);
81c4762a1bSJed Brown   ierr = DMGetDimension(*dm, &dim);CHKERRQ(ierr);
82c4762a1bSJed Brown 
83c4762a1bSJed Brown   if (testp4est_seq) {
84c4762a1bSJed Brown #if defined(PETSC_HAVE_P4EST)
85c4762a1bSJed Brown     DM dmConv = NULL;
86c4762a1bSJed Brown 
8754fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr);
8854fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr);
8954fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr);
9054fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr);
9154fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckPointSF(*dm);CHKERRQ(ierr);
9254fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckInterfaceCones(*dm);CHKERRQ(ierr);
93c4762a1bSJed Brown     ierr = DMPlexSetRefinementUniform(*dm, PETSC_TRUE);CHKERRQ(ierr);
94012bc364SMatthew G. Knepley     ierr = DMPlexSetTransformType(*dm, DMPLEXREFINETOBOX);CHKERRQ(ierr);
9554fcfd0cSMatthew G. Knepley     ierr = DMRefine(*dm, PETSC_COMM_WORLD, &dmConv);CHKERRQ(ierr);
96012bc364SMatthew G. Knepley     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr);
97c4762a1bSJed Brown     if (dmConv) {
98c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
99c4762a1bSJed Brown       *dm  = dmConv;
100c4762a1bSJed Brown     }
10154fcfd0cSMatthew G. Knepley     ierr = DMViewFromOptions(*dm,NULL,"-initref_dm_view");CHKERRQ(ierr);
10254fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr);
10354fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr);
10454fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr);
10554fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr);
10654fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckPointSF(*dm);CHKERRQ(ierr);
10754fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckInterfaceCones(*dm);CHKERRQ(ierr);
108c4762a1bSJed Brown 
109c4762a1bSJed Brown     ierr = DMConvert(*dm,dim == 2 ? DMP4EST : DMP8EST,&dmConv);CHKERRQ(ierr);
110c4762a1bSJed Brown     if (dmConv) {
111c4762a1bSJed Brown       ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_seq_1_");CHKERRQ(ierr);
112c4762a1bSJed Brown       ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr);
113c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
114c4762a1bSJed Brown       *dm  = dmConv;
115c4762a1bSJed Brown     }
116c4762a1bSJed Brown     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_seq_1_");CHKERRQ(ierr);
117c4762a1bSJed Brown     ierr = DMSetUp(*dm);CHKERRQ(ierr);
118c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr);
119c4762a1bSJed Brown     ierr = DMConvert(*dm,DMPLEX,&dmConv);CHKERRQ(ierr);
120c4762a1bSJed Brown     if (dmConv) {
121c4762a1bSJed Brown       ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_seq_2_");CHKERRQ(ierr);
122e600fa54SMatthew G. Knepley       ierr = DMPlexDistributeSetDefault(dmConv, PETSC_FALSE);CHKERRQ(ierr);
123c4762a1bSJed Brown       ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr);
124c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
125c4762a1bSJed Brown       *dm  = dmConv;
126c4762a1bSJed Brown     }
127c4762a1bSJed Brown     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_seq_2_");CHKERRQ(ierr);
128c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr);
129c4762a1bSJed Brown     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr);
130c4762a1bSJed Brown #else
131c4762a1bSJed Brown     SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Recompile with --download-p4est");
132c4762a1bSJed Brown #endif
133c4762a1bSJed Brown   }
134c4762a1bSJed Brown 
135c4762a1bSJed Brown   ierr = PetscLogStagePop();CHKERRQ(ierr);
136c4762a1bSJed Brown   if (!testp4est_seq) {
137c4762a1bSJed Brown     ierr = PetscLogStagePush(user->stages[STAGE_DISTRIBUTE]);CHKERRQ(ierr);
138c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_pre_dist_view");CHKERRQ(ierr);
13930602db0SMatthew G. Knepley     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "dist_");CHKERRQ(ierr);
14030602db0SMatthew G. Knepley     ierr = DMSetFromOptions(*dm);CHKERRQ(ierr);
14130602db0SMatthew G. Knepley     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr);
142c4762a1bSJed Brown     ierr = PetscLogStagePop();CHKERRQ(ierr);
143c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-distributed_dm_view");CHKERRQ(ierr);
144c4762a1bSJed Brown   }
145c4762a1bSJed Brown   ierr = PetscLogStagePush(user->stages[STAGE_REFINE]);CHKERRQ(ierr);
14630602db0SMatthew G. Knepley   ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "ref_");CHKERRQ(ierr);
147c4762a1bSJed Brown   ierr = DMSetFromOptions(*dm);CHKERRQ(ierr);
14830602db0SMatthew G. Knepley   ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr);
149c4762a1bSJed Brown   ierr = PetscLogStagePop();CHKERRQ(ierr);
150c4762a1bSJed Brown 
151c4762a1bSJed Brown   if (testp4est_par) {
152c4762a1bSJed Brown #if defined(PETSC_HAVE_P4EST)
153c4762a1bSJed Brown     DM dmConv = NULL;
154c4762a1bSJed Brown 
15596ca5757SLisandro Dalcin     ierr = DMViewFromOptions(*dm, NULL, "-dm_tobox_view");CHKERRQ(ierr);
156c4762a1bSJed Brown     ierr = DMPlexSetRefinementUniform(*dm, PETSC_TRUE);CHKERRQ(ierr);
157012bc364SMatthew G. Knepley     ierr = DMPlexSetTransformType(*dm, DMPLEXREFINETOBOX);CHKERRQ(ierr);
15854fcfd0cSMatthew G. Knepley     ierr = DMRefine(*dm, PETSC_COMM_WORLD, &dmConv);CHKERRQ(ierr);
159012bc364SMatthew G. Knepley     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr);
160c4762a1bSJed Brown     if (dmConv) {
161c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
162c4762a1bSJed Brown       *dm  = dmConv;
163c4762a1bSJed Brown     }
16496ca5757SLisandro Dalcin     ierr = DMViewFromOptions(*dm, NULL, "-dm_tobox_view");CHKERRQ(ierr);
16554fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr);
16654fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr);
16754fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr);
16854fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr);
16954fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckPointSF(*dm);CHKERRQ(ierr);
17054fcfd0cSMatthew G. Knepley     ierr = DMPlexCheckInterfaceCones(*dm);CHKERRQ(ierr);
171c4762a1bSJed Brown 
172c4762a1bSJed Brown     ierr = DMConvert(*dm,dim == 2 ? DMP4EST : DMP8EST,&dmConv);CHKERRQ(ierr);
173c4762a1bSJed Brown     if (dmConv) {
174c4762a1bSJed Brown       ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_par_1_");CHKERRQ(ierr);
175c4762a1bSJed Brown       ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr);
176c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
177c4762a1bSJed Brown       *dm  = dmConv;
178c4762a1bSJed Brown     }
179c4762a1bSJed Brown     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_par_1_");CHKERRQ(ierr);
180c4762a1bSJed Brown     ierr = DMSetUp(*dm);CHKERRQ(ierr);
181c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr);
182c4762a1bSJed Brown     ierr = DMConvert(*dm, DMPLEX, &dmConv);CHKERRQ(ierr);
183c4762a1bSJed Brown     if (dmConv) {
184c4762a1bSJed Brown       ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_par_2_");CHKERRQ(ierr);
185e600fa54SMatthew G. Knepley       ierr = DMPlexDistributeSetDefault(dmConv, PETSC_FALSE);CHKERRQ(ierr);
186c4762a1bSJed Brown       ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr);
187c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
188c4762a1bSJed Brown       *dm  = dmConv;
189c4762a1bSJed Brown     }
190c4762a1bSJed Brown     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_par_2_");CHKERRQ(ierr);
191c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr);
192c4762a1bSJed Brown     ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr);
193c4762a1bSJed Brown #else
194c4762a1bSJed Brown     SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Recompile with --download-p4est");
195c4762a1bSJed Brown #endif
196c4762a1bSJed Brown   }
197c4762a1bSJed Brown 
198c4762a1bSJed Brown   /* test redistribution of an already distributed mesh */
199c4762a1bSJed Brown   if (user->redistribute) {
200c4762a1bSJed Brown     DM       distributedMesh;
2010a19bb7dSprj-     PetscSF  sf;
2020a19bb7dSprj-     PetscInt nranks;
203c4762a1bSJed Brown 
204c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_pre_redist_view");CHKERRQ(ierr);
205c4762a1bSJed Brown     ierr = DMPlexDistribute(*dm, 0, NULL, &distributedMesh);CHKERRQ(ierr);
206c4762a1bSJed Brown     if (distributedMesh) {
2070a19bb7dSprj-       ierr = DMGetPointSF(distributedMesh, &sf);CHKERRQ(ierr);
2080a19bb7dSprj-       ierr = PetscSFSetUp(sf);CHKERRQ(ierr);
2090a19bb7dSprj-       ierr = DMGetNeighbors(distributedMesh, &nranks, NULL);CHKERRQ(ierr);
210ffc4695bSBarry Smith       ierr = MPI_Allreduce(MPI_IN_PLACE, &nranks, 1, MPIU_INT, MPI_MIN, PetscObjectComm((PetscObject)*dm));CHKERRMPI(ierr);
2110a19bb7dSprj-       ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)*dm)), "Minimum number of neighbors: %D\n", nranks);CHKERRQ(ierr);
212c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
213c4762a1bSJed Brown       *dm  = distributedMesh;
214c4762a1bSJed Brown     }
215c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_post_redist_view");CHKERRQ(ierr);
216c4762a1bSJed Brown   }
217c4762a1bSJed Brown 
218c4762a1bSJed Brown   if (user->overlap) {
219c4762a1bSJed Brown     DM overlapMesh = NULL;
220c4762a1bSJed Brown 
221c4762a1bSJed Brown     /* Add the overlap to refined mesh */
222c4762a1bSJed Brown     ierr = PetscLogStagePush(user->stages[STAGE_OVERLAP]);CHKERRQ(ierr);
223c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_pre_overlap_view");CHKERRQ(ierr);
224c4762a1bSJed Brown     ierr = DMPlexDistributeOverlap(*dm, user->overlap, NULL, &overlapMesh);CHKERRQ(ierr);
225c4762a1bSJed Brown     if (overlapMesh) {
226c4762a1bSJed Brown       PetscInt overlap;
227c4762a1bSJed Brown       ierr = DMPlexGetOverlap(overlapMesh, &overlap);CHKERRQ(ierr);
228c4762a1bSJed Brown       ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD, "Overlap: %D\n", overlap);CHKERRQ(ierr);
229c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
230c4762a1bSJed Brown       *dm = overlapMesh;
231c4762a1bSJed Brown     }
232c4762a1bSJed Brown     ierr = DMViewFromOptions(*dm, NULL, "-dm_post_overlap_view");CHKERRQ(ierr);
233c4762a1bSJed Brown     ierr = PetscLogStagePop();CHKERRQ(ierr);
234c4762a1bSJed Brown   }
235c4762a1bSJed Brown   if (user->final_ref) {
236c4762a1bSJed Brown     DM refinedMesh = NULL;
237c4762a1bSJed Brown 
238c4762a1bSJed Brown     ierr = DMPlexSetRefinementUniform(*dm, PETSC_TRUE);CHKERRQ(ierr);
239c4762a1bSJed Brown     ierr = DMRefine(*dm, comm, &refinedMesh);CHKERRQ(ierr);
240c4762a1bSJed Brown     if (refinedMesh) {
241c4762a1bSJed Brown       ierr = DMDestroy(dm);CHKERRQ(ierr);
242c4762a1bSJed Brown       *dm  = refinedMesh;
243c4762a1bSJed Brown     }
244c4762a1bSJed Brown   }
245c4762a1bSJed Brown 
24652b05773SJed Brown   ierr = PetscObjectSetName((PetscObject) *dm, "Generated Mesh");CHKERRQ(ierr);
247c4762a1bSJed Brown   ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr);
248c4762a1bSJed Brown   if (user->final_diagnostics) {
249c4762a1bSJed Brown     DMPlexInterpolatedFlag interpolated;
250c4762a1bSJed Brown     PetscInt  dim, depth;
251c4762a1bSJed Brown 
252c4762a1bSJed Brown     ierr = DMGetDimension(*dm, &dim);CHKERRQ(ierr);
253c4762a1bSJed Brown     ierr = DMPlexGetDepth(*dm, &depth);CHKERRQ(ierr);
254c4762a1bSJed Brown     ierr = DMPlexIsInterpolatedCollective(*dm, &interpolated);CHKERRQ(ierr);
255c4762a1bSJed Brown 
256c4762a1bSJed Brown     ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr);
257c4762a1bSJed Brown     if (interpolated == DMPLEX_INTERPOLATED_FULL) {
258c4762a1bSJed Brown       ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr);
259c4762a1bSJed Brown     }
260c4762a1bSJed Brown     ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr);
261c4762a1bSJed Brown     ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr);
262c4762a1bSJed Brown   }
263c4762a1bSJed Brown   ierr = PetscLogEventEnd(user->createMeshEvent,0,0,0,0);CHKERRQ(ierr);
264c4762a1bSJed Brown   PetscFunctionReturn(0);
265c4762a1bSJed Brown }
266c4762a1bSJed Brown 
267c4762a1bSJed Brown int main(int argc, char **argv)
268c4762a1bSJed Brown {
26930602db0SMatthew G. Knepley   DM             dm;
27030602db0SMatthew G. Knepley   AppCtx         user;
271c4762a1bSJed Brown   PetscErrorCode ierr;
272c4762a1bSJed Brown 
273c4762a1bSJed Brown   ierr = PetscInitialize(&argc, &argv, NULL, help);if (ierr) return ierr;
274c4762a1bSJed Brown   ierr = ProcessOptions(PETSC_COMM_WORLD, &user);CHKERRQ(ierr);
27530602db0SMatthew G. Knepley   ierr = CreateMesh(PETSC_COMM_WORLD, &user, &dm);CHKERRQ(ierr);
27630602db0SMatthew G. Knepley   ierr = DMDestroy(&dm);CHKERRQ(ierr);
277c4762a1bSJed Brown   ierr = PetscFinalize();
278c4762a1bSJed Brown   return ierr;
279c4762a1bSJed Brown }
280c4762a1bSJed Brown 
281c4762a1bSJed Brown /*TEST
282c4762a1bSJed Brown 
283c4762a1bSJed Brown   # CTetGen 0-1
284c4762a1bSJed Brown   test:
285c4762a1bSJed Brown     suffix: 0
286c4762a1bSJed Brown     requires: ctetgen
28730602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_interpolate 0 -ctetgen_verbose 4 -dm_view ascii::ascii_info_detail -info :~sys
288c4762a1bSJed Brown   test:
289c4762a1bSJed Brown     suffix: 1
290c4762a1bSJed Brown     requires: ctetgen
29130602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_interpolate 0 -ctetgen_verbose 4 -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail -info :~sys
292c4762a1bSJed Brown 
293c4762a1bSJed Brown   # 2D LaTex and ASCII output 2-9
294c4762a1bSJed Brown   test:
295c4762a1bSJed Brown     suffix: 2
296c4762a1bSJed Brown     requires: triangle
29730602db0SMatthew G. Knepley     args: -dm_plex_interpolate 0 -dm_view ascii::ascii_latex
298c4762a1bSJed Brown   test:
299c4762a1bSJed Brown     suffix: 3
300c4762a1bSJed Brown     requires: triangle
30130602db0SMatthew G. Knepley     args: -ref_dm_refine 1 -dm_view ascii::ascii_info_detail
302c4762a1bSJed Brown   test:
303c4762a1bSJed Brown     suffix: 4
304c4762a1bSJed Brown     requires: triangle
305c4762a1bSJed Brown     nsize: 2
30630602db0SMatthew G. Knepley     args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_info_detail
307c4762a1bSJed Brown   test:
308c4762a1bSJed Brown     suffix: 5
309c4762a1bSJed Brown     requires: triangle
310c4762a1bSJed Brown     nsize: 2
31130602db0SMatthew G. Knepley     args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_latex
312c4762a1bSJed Brown   test:
313c4762a1bSJed Brown     suffix: 6
31430602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_simplex 0 -dm_view ascii::ascii_info_detail
315c4762a1bSJed Brown   test:
316c4762a1bSJed Brown     suffix: 7
31730602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_simplex 0 -ref_dm_refine 1 -dm_view ascii::ascii_info_detail
318c4762a1bSJed Brown   test:
319c4762a1bSJed Brown     suffix: 8
320c4762a1bSJed Brown     nsize: 2
32130602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_latex
322c4762a1bSJed Brown 
323c4762a1bSJed Brown   # 1D ASCII output
32430602db0SMatthew G. Knepley   testset:
32530602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 1 -dm_view ascii::ascii_info_detail -dm_plex_check_all
326c4762a1bSJed Brown     test:
327c4762a1bSJed Brown       suffix: 1d_0
32830602db0SMatthew G. Knepley       args:
329c4762a1bSJed Brown     test:
330c4762a1bSJed Brown       suffix: 1d_1
33130602db0SMatthew G. Knepley       args: -ref_dm_refine 2
332c4762a1bSJed Brown     test:
333c4762a1bSJed Brown       suffix: 1d_2
33430602db0SMatthew G. Knepley       args: -dm_plex_box_faces 5 -dm_plex_box_bd periodic
335c4762a1bSJed Brown 
336c4762a1bSJed Brown   # Parallel refinement tests with overlap
337c4762a1bSJed Brown   test:
338c4762a1bSJed Brown     suffix: refine_overlap_1d
339c4762a1bSJed Brown     nsize: 2
34030602db0SMatthew G. Knepley     args: -dm_plex_dim 1 -dim 1 -dm_plex_box_faces 4 -dm_plex_box_faces 4 -ref_dm_refine 1 -overlap {{0 1 2}separate output} -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_info
341c4762a1bSJed Brown   test:
342c4762a1bSJed Brown     suffix: refine_overlap_2d
343c4762a1bSJed Brown     requires: triangle
344c4762a1bSJed Brown     nsize: {{2 8}separate output}
34530602db0SMatthew G. Knepley     args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -overlap {{0 1 2}separate output} -dm_view ascii::ascii_info
346c4762a1bSJed Brown 
347d410b0cfSMatthew G. Knepley   # Parallel extrusion tests
348d410b0cfSMatthew G. Knepley   test:
349d410b0cfSMatthew G. Knepley     suffix: spheresurface_extruded
350d410b0cfSMatthew G. Knepley     nsize : 4
351d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_shape sphere -dm_extrude 3 -dist_dm_distribute -petscpartitioner_type simple \
352d410b0cfSMatthew G. Knepley           -dm_plex_check_all -dm_view ::ascii_info_detail -dm_plex_view_coord_system spherical
353d410b0cfSMatthew G. Knepley 
354d410b0cfSMatthew G. Knepley   test:
355d410b0cfSMatthew G. Knepley     suffix: spheresurface_extruded_symmetric
356d410b0cfSMatthew G. Knepley     nsize : 4
357d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_shape sphere -dm_extrude 3 -dm_plex_transform_extrude_symmetric -dist_dm_distribute -petscpartitioner_type simple \
358d410b0cfSMatthew G. Knepley           -dm_plex_check_all -dm_view ::ascii_info_detail -dm_plex_view_coord_system spherical
359d410b0cfSMatthew G. Knepley 
360c4762a1bSJed Brown   # Parallel simple partitioner tests
361c4762a1bSJed Brown   test:
362c4762a1bSJed Brown     suffix: part_simple_0
363c4762a1bSJed Brown     requires: triangle
364c4762a1bSJed Brown     nsize: 2
36530602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_interpolate 0 -dist_dm_distribute -petscpartitioner_type simple -dist_partition_view -dm_view ascii::ascii_info_detail
366c4762a1bSJed Brown   test:
367c4762a1bSJed Brown     suffix: part_simple_1
368c4762a1bSJed Brown     requires: triangle
369c4762a1bSJed Brown     nsize: 8
37030602db0SMatthew G. Knepley     args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dist_partition_view -dm_view ascii::ascii_info_detail
371c4762a1bSJed Brown 
372c4762a1bSJed Brown   # Parallel partitioner tests
373c4762a1bSJed Brown   test:
374c4762a1bSJed Brown     suffix: part_parmetis_0
375c4762a1bSJed Brown     requires: parmetis
376c4762a1bSJed Brown     nsize: 2
3775a107427SMatthew G. Knepley     args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type parmetis -dm_view -petscpartitioner_view -test_redistribute -dm_plex_csr_alg {{mat graph overlap}} -dm_pre_redist_view ::load_balance -dm_post_redist_view ::load_balance -petscpartitioner_view_graph
378c4762a1bSJed Brown   test:
379c4762a1bSJed Brown     suffix: part_ptscotch_0
380c4762a1bSJed Brown     requires: ptscotch
381c4762a1bSJed Brown     nsize: 2
3825a107427SMatthew G. Knepley     args: -dm_plex_simplex 0 -dist_dm_distribute -petscpartitioner_type ptscotch -petscpartitioner_view -petscpartitioner_ptscotch_strategy quality -test_redistribute -dm_plex_csr_alg {{mat graph overlap}} -dm_pre_redist_view ::load_balance -dm_post_redist_view ::load_balance -petscpartitioner_view_graph
383c4762a1bSJed Brown   test:
384c4762a1bSJed Brown     suffix: part_ptscotch_1
385c4762a1bSJed Brown     requires: ptscotch
386c4762a1bSJed Brown     nsize: 8
38730602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type ptscotch -petscpartitioner_view -petscpartitioner_ptscotch_imbalance 0.1
388c4762a1bSJed Brown 
389c4762a1bSJed Brown   # CGNS reader tests 10-11 (need to find smaller test meshes)
390c4762a1bSJed Brown   test:
391c4762a1bSJed Brown     suffix: cgns_0
392c4762a1bSJed Brown     requires: cgns
39330602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/tut21.cgns -dm_view
394c4762a1bSJed Brown 
395c4762a1bSJed Brown   # Gmsh mesh reader tests
39630602db0SMatthew G. Knepley   testset:
39730602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_view
39830602db0SMatthew G. Knepley 
399c4762a1bSJed Brown     test:
400c4762a1bSJed Brown       suffix: gmsh_0
401c4762a1bSJed Brown       requires: !single
40230602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
403c4762a1bSJed Brown     test:
404c4762a1bSJed Brown       suffix: gmsh_1
405c4762a1bSJed Brown       requires: !single
40630602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.msh
407c4762a1bSJed Brown     test:
408c4762a1bSJed Brown       suffix: gmsh_2
409c4762a1bSJed Brown       requires: !single
41030602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh
411c4762a1bSJed Brown     test:
412c4762a1bSJed Brown       suffix: gmsh_3
413c4762a1bSJed Brown       nsize: 3
414c4762a1bSJed Brown       requires: !single
41530602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.msh -dist_dm_distribute -petscpartitioner_type simple
416c4762a1bSJed Brown     test:
417c4762a1bSJed Brown       suffix: gmsh_4
418c4762a1bSJed Brown       nsize: 3
419c4762a1bSJed Brown       requires: !single
42030602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dist_dm_distribute -petscpartitioner_type simple
421c4762a1bSJed Brown     test:
422c4762a1bSJed Brown       suffix: gmsh_5
423c4762a1bSJed Brown       requires: !single
42430602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_quad.msh
425c4762a1bSJed Brown     # TODO: it seems the mesh is not a valid gmsh (inverted cell)
426c4762a1bSJed Brown     test:
427c4762a1bSJed Brown       suffix: gmsh_6
428c4762a1bSJed Brown       requires: !single
42930602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin_physnames.msh -final_diagnostics 0
430c4762a1bSJed Brown     test:
431c4762a1bSJed Brown       suffix: gmsh_7
43230602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_view ::ascii_info_detail -dm_plex_check_all
433c4762a1bSJed Brown     test:
434c4762a1bSJed Brown       suffix: gmsh_8
43530602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh -dm_view ::ascii_info_detail -dm_plex_check_all
436c4762a1bSJed Brown   testset:
43730602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic_bin.msh -dm_view ::ascii_info_detail -dm_plex_check_all
438c4762a1bSJed Brown     test:
439c4762a1bSJed Brown       suffix: gmsh_9
440c4762a1bSJed Brown     test:
441c4762a1bSJed Brown       suffix: gmsh_9_periodic_0
442c4762a1bSJed Brown       args: -dm_plex_gmsh_periodic 0
443c4762a1bSJed Brown   testset:
44430602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view ::ascii_info_detail -dm_plex_check_all
445c4762a1bSJed Brown     test:
446c4762a1bSJed Brown       suffix: gmsh_10
447c4762a1bSJed Brown     test:
448c4762a1bSJed Brown       suffix: gmsh_10_periodic_0
449c4762a1bSJed Brown       args: -dm_plex_gmsh_periodic 0
450c4762a1bSJed Brown   testset:
45130602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view ::ascii_info_detail -dm_plex_check_all -ref_dm_refine 1
452c4762a1bSJed Brown     test:
453c4762a1bSJed Brown       suffix: gmsh_11
454c4762a1bSJed Brown     test:
455c4762a1bSJed Brown       suffix: gmsh_11_periodic_0
456c4762a1bSJed Brown       args: -dm_plex_gmsh_periodic 0
457c4762a1bSJed Brown   # TODO: it seems the mesh is not a valid gmsh (inverted cell)
458c4762a1bSJed Brown   test:
459c4762a1bSJed Brown     suffix: gmsh_12
460c4762a1bSJed Brown     nsize: 4
461c4762a1bSJed Brown     requires: !single mpiio
46230602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin_physnames.msh -viewer_binary_mpiio -dist_dm_distribute -petscpartitioner_type simple -dm_view -final_diagnostics 0
463c4762a1bSJed Brown   test:
464c4762a1bSJed Brown     suffix: gmsh_13_hybs2t
465c4762a1bSJed Brown     nsize: 4
466012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh -dist_dm_distribute -petscpartitioner_type simple -dm_view -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all
467c4762a1bSJed Brown   test:
468c4762a1bSJed Brown     suffix: gmsh_14_ext
469c4762a1bSJed Brown     requires: !single
470d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_extrude 2 -dm_plex_transform_extrude_thickness 1.5 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dm_view -dm_plex_check_all
471c4762a1bSJed Brown   test:
472c4762a1bSJed Brown     suffix: gmsh_14_ext_s2t
473c4762a1bSJed Brown     requires: !single
474d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_extrude 2 -dm_plex_transform_extrude_thickness 1.5 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox
475c4762a1bSJed Brown   test:
476c4762a1bSJed Brown     suffix: gmsh_15_hyb3d
47730602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view -dm_plex_check_all
478c4762a1bSJed Brown   test:
479c4762a1bSJed Brown     suffix: gmsh_15_hyb3d_vtk
48030602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view vtk: -dm_plex_gmsh_hybrid -dm_plex_check_all
481c4762a1bSJed Brown   test:
482c4762a1bSJed Brown     suffix: gmsh_15_hyb3d_s2t
483012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox
484c4762a1bSJed Brown   test:
485c4762a1bSJed Brown     suffix: gmsh_16_spheresurface
486c4762a1bSJed Brown     nsize : 4
48730602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple
488c4762a1bSJed Brown   test:
489c4762a1bSJed Brown     suffix: gmsh_16_spheresurface_s2t
490c4762a1bSJed Brown     nsize : 4
491012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple
492c4762a1bSJed Brown   test:
493c4762a1bSJed Brown     suffix: gmsh_16_spheresurface_extruded
494c4762a1bSJed Brown     nsize : 4
495d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple
496c4762a1bSJed Brown   test:
497c4762a1bSJed Brown     suffix: gmsh_16_spheresurface_extruded_s2t
498c4762a1bSJed Brown     nsize : 4
499d410b0cfSMatthew G. Knepley     args: -dm_coord_space 0 -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple
500c4762a1bSJed Brown   test:
501c4762a1bSJed Brown     suffix: gmsh_17_hyb3d_interp_ascii
50230602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_hexwedge.msh -dm_view -dm_plex_check_all
503c4762a1bSJed Brown   test:
504c4762a1bSJed Brown     suffix: exodus_17_hyb3d_interp_ascii
505c4762a1bSJed Brown     requires: exodusii
50630602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_hexwedge.exo -dm_view -dm_plex_check_all
507c4762a1bSJed Brown 
508c4762a1bSJed Brown   # Legacy Gmsh v22/v40 ascii/binary reader tests
509c4762a1bSJed Brown   testset:
510c4762a1bSJed Brown     output_file: output/ex1_gmsh_3d_legacy.out
51130602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all
512c4762a1bSJed Brown     test:
513c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v22
51430602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh2
515c4762a1bSJed Brown     test:
516c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v40
51730602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh4
518c4762a1bSJed Brown     test:
519c4762a1bSJed Brown       suffix: gmsh_3d_binary_v22
52030602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary.msh2
521c4762a1bSJed Brown     test:
522c4762a1bSJed Brown       suffix: gmsh_3d_binary_v40
523c4762a1bSJed Brown       requires: long64
52430602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary.msh4
525c4762a1bSJed Brown 
526c4762a1bSJed Brown   # Gmsh v41 ascii/binary reader tests
527c4762a1bSJed Brown   testset: # 32bit mesh, sequential
52830602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all
529c4762a1bSJed Brown     output_file: output/ex1_gmsh_3d_32.out
530c4762a1bSJed Brown     test:
531c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v41_32
53230602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-32.msh
533c4762a1bSJed Brown     test:
534c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_32
53530602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh
536c4762a1bSJed Brown     test:
537c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_32_mpiio
538dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPIIO)
53930602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh -viewer_binary_mpiio
5408cd392daSMatthew G. Knepley   test:
5418cd392daSMatthew G. Knepley     suffix: gmsh_quad_8node
5428cd392daSMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-qua-8node.msh \
5438cd392daSMatthew G. Knepley           -dm_view -dm_plex_check_all
5448cd392daSMatthew G. Knepley   test:
5458cd392daSMatthew G. Knepley     suffix: gmsh_hex_20node
5468cd392daSMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-hex-20node.msh \
5478cd392daSMatthew G. Knepley           -dm_view -dm_plex_check_all
548c4762a1bSJed Brown   testset:  # 32bit mesh, parallel
54930602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dist_dm_distribute -petscpartitioner_type simple -dm_view ::ascii_info_detail -dm_plex_check_all
550c4762a1bSJed Brown     nsize: 2
551c4762a1bSJed Brown     output_file: output/ex1_gmsh_3d_32_np2.out
552c4762a1bSJed Brown     test:
553c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v41_32_np2
55430602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-32.msh
555c4762a1bSJed Brown     test:
556c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_32_np2
55730602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh
558c4762a1bSJed Brown     test:
559c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_32_np2_mpiio
560dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPIIO)
56130602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh -viewer_binary_mpiio
562c4762a1bSJed Brown   testset: # 64bit mesh, sequential
56330602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all
564c4762a1bSJed Brown     output_file: output/ex1_gmsh_3d_64.out
565c4762a1bSJed Brown     test:
566c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v41_64
56730602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-64.msh
568c4762a1bSJed Brown     test:
569c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_64
57030602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh
571c4762a1bSJed Brown     test:
572c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_64_mpiio
573dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPIIO)
57430602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh -viewer_binary_mpiio
575c4762a1bSJed Brown   testset:  # 64bit mesh, parallel
57630602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dist_dm_distribute -petscpartitioner_type simple -dm_view ::ascii_info_detail -dm_plex_check_all
577c4762a1bSJed Brown     nsize: 2
578c4762a1bSJed Brown     output_file: output/ex1_gmsh_3d_64_np2.out
579c4762a1bSJed Brown     test:
580c4762a1bSJed Brown       suffix: gmsh_3d_ascii_v41_64_np2
58130602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-64.msh
582c4762a1bSJed Brown     test:
583c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_64_np2
58430602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh
585c4762a1bSJed Brown     test:
586c4762a1bSJed Brown       suffix: gmsh_3d_binary_v41_64_np2_mpiio
587dfd57a17SPierre Jolivet       requires: defined(PETSC_HAVE_MPIIO)
58830602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh -viewer_binary_mpiio
589c4762a1bSJed Brown 
590c4762a1bSJed Brown   # Fluent mesh reader tests
591c4762a1bSJed Brown   # TODO: Geometry checks fail
592c4762a1bSJed Brown   test:
593c4762a1bSJed Brown     suffix: fluent_0
594c4762a1bSJed Brown     requires: !complex
59530602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.cas -dm_view -final_diagnostics 0
596c4762a1bSJed Brown   test:
597c4762a1bSJed Brown     suffix: fluent_1
598c4762a1bSJed Brown     nsize: 3
599c4762a1bSJed Brown     requires: !complex
60030602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.cas -dist_dm_distribute -petscpartitioner_type simple -dm_view -final_diagnostics 0
601c4762a1bSJed Brown   test:
602c4762a1bSJed Brown     suffix: fluent_2
603c4762a1bSJed Brown     requires: !complex
60430602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cube_5tets_ascii.cas -dm_view -final_diagnostics 0
605c4762a1bSJed Brown   test:
606c4762a1bSJed Brown     suffix: fluent_3
607c4762a1bSJed Brown     requires: !complex
608c4762a1bSJed Brown     TODO: Fails on non-linux: fseek(), fileno() ? https://gitlab.com/petsc/petsc/merge_requests/2206#note_238166382
60930602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cube_5tets.cas -dm_view -final_diagnostics 0
610c4762a1bSJed Brown 
611c4762a1bSJed Brown   # Med mesh reader tests, including parallel file reads
612c4762a1bSJed Brown   test:
613c4762a1bSJed Brown     suffix: med_0
614c4762a1bSJed Brown     requires: med
61530602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.med -dm_view
616c4762a1bSJed Brown   test:
617c4762a1bSJed Brown     suffix: med_1
618c4762a1bSJed Brown     requires: med
619c4762a1bSJed Brown     nsize: 3
62030602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.med -dist_dm_distribute -petscpartitioner_type simple -dm_view
621c4762a1bSJed Brown   test:
622c4762a1bSJed Brown     suffix: med_2
623c4762a1bSJed Brown     requires: med
62430602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cylinder.med -dm_view
625c4762a1bSJed Brown   test:
626c4762a1bSJed Brown     suffix: med_3
627c4762a1bSJed Brown     requires: med
628c4762a1bSJed Brown     TODO: MED
629c4762a1bSJed Brown     nsize: 3
63030602db0SMatthew G. Knepley     args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cylinder.med -dist_dm_distribute -petscpartitioner_type simple -dm_view
631c4762a1bSJed Brown 
632c4762a1bSJed Brown   # Test shape quality
633c4762a1bSJed Brown   test:
634c4762a1bSJed Brown     suffix: test_shape
635c4762a1bSJed Brown     requires: ctetgen
63630602db0SMatthew G. Knepley     args: -dm_plex_dim 3 -dim 3 -dm_refine_hierarchy 3 -dm_plex_check_all -dm_plex_check_cell_shape
637c4762a1bSJed Brown 
638c4762a1bSJed Brown   # Test simplex to tensor conversion
639c4762a1bSJed Brown   test:
640c4762a1bSJed Brown     suffix: s2t2
641c4762a1bSJed Brown     requires: triangle
642012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail
643c4762a1bSJed Brown 
644c4762a1bSJed Brown   test:
645c4762a1bSJed Brown     suffix: s2t3
646c4762a1bSJed Brown     requires: ctetgen
647012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail
648c4762a1bSJed Brown 
64930602db0SMatthew G. Knepley   # Test cylinder
65030602db0SMatthew G. Knepley   testset:
65130602db0SMatthew G. Knepley     args: -dm_plex_shape cylinder -dm_plex_check_all -dm_view
652c4762a1bSJed Brown     test:
653c4762a1bSJed Brown       suffix: cylinder
65430602db0SMatthew G. Knepley       args: -ref_dm_refine 1
655c4762a1bSJed Brown     test:
656c4762a1bSJed Brown       suffix: cylinder_per
65761a622f3SMatthew G. Knepley       args: -dm_plex_cylinder_bd periodic -ref_dm_refine 1 -ref_dm_refine_remap 0
658c4762a1bSJed Brown     test:
659c4762a1bSJed Brown       suffix: cylinder_wedge
66061a622f3SMatthew G. Knepley       args: -dm_coord_space 0 -dm_plex_interpolate 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk:
661c4762a1bSJed Brown     test:
662c4762a1bSJed Brown       suffix: cylinder_wedge_int
663c4762a1bSJed Brown       output_file: output/ex1_cylinder_wedge.out
66461a622f3SMatthew G. Knepley       args: -dm_coord_space 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk:
665c4762a1bSJed Brown 
666c4762a1bSJed Brown   test:
667c4762a1bSJed Brown     suffix: box_2d
66830602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -ref_dm_refine 2 -dm_plex_check_all -dm_view
669c4762a1bSJed Brown 
670c4762a1bSJed Brown   test:
671c4762a1bSJed Brown     suffix: box_2d_per
67230602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -ref_dm_refine 2 -dm_plex_check_all -dm_view
673c4762a1bSJed Brown 
674c4762a1bSJed Brown   test:
675c4762a1bSJed Brown     suffix: box_2d_per_unint
67630602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_simplex 0 -dm_plex_interpolate 0 -dm_plex_box_faces 3,3 -dm_plex_box_faces 3,3 -dm_plex_check_all -dm_view ::ascii_info_detail
677c4762a1bSJed Brown 
678c4762a1bSJed Brown   test:
679c4762a1bSJed Brown     suffix: box_3d
68030602db0SMatthew G. Knepley     args: -dm_plex_dim 3 -dim 3 -dm_plex_simplex 0 -ref_dm_refine 3 -dm_plex_check_all -dm_view
681c4762a1bSJed Brown 
682c4762a1bSJed Brown   test:
683c4762a1bSJed Brown     requires: triangle
684c4762a1bSJed Brown     suffix: box_wedge
68561a622f3SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_simplex 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk: -dm_plex_check_all
686c4762a1bSJed Brown 
687c4762a1bSJed Brown   testset:
688c4762a1bSJed Brown     requires: triangle
689012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_cell tensor_triangular_prism -dm_plex_box_faces 2,3,1 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox
690c4762a1bSJed Brown     test:
691c4762a1bSJed Brown       suffix: box_wedge_s2t
692c4762a1bSJed Brown     test:
693c4762a1bSJed Brown       nsize: 3
69430602db0SMatthew G. Knepley       args: -dist_dm_distribute -petscpartitioner_type simple
695c4762a1bSJed Brown       suffix: box_wedge_s2t_parallel
696c4762a1bSJed Brown 
697c4762a1bSJed Brown   # Test GLVis output
69830602db0SMatthew G. Knepley   testset:
69930602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_interpolate 0
700c4762a1bSJed Brown     test:
701c4762a1bSJed Brown       suffix: glvis_2d_tet
70230602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_plex_gmsh_periodic 0 -dm_view glvis:
703c4762a1bSJed Brown     test:
704c4762a1bSJed Brown       suffix: glvis_2d_tet_per
70530602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 0
706c4762a1bSJed Brown     test:
707c4762a1bSJed Brown       suffix: glvis_3d_tet
70830602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_plex_gmsh_periodic 0 -dm_view glvis:
70930602db0SMatthew G. Knepley   testset:
71030602db0SMatthew G. Knepley     args: -dm_coord_space 0
71130602db0SMatthew G. Knepley     test:
71230602db0SMatthew G. Knepley       suffix: glvis_2d_tet_per_mfem
71330602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem -dm_view glvis:
71430602db0SMatthew G. Knepley     test:
71530602db0SMatthew G. Knepley       suffix: glvis_2d_quad
71630602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_view glvis:
71730602db0SMatthew G. Knepley     test:
71830602db0SMatthew G. Knepley       suffix: glvis_2d_quad_per
71930602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_plex_box_bd periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary
72030602db0SMatthew G. Knepley     test:
72130602db0SMatthew G. Knepley       suffix: glvis_2d_quad_per_mfem
72230602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_plex_box_bd periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem
723c4762a1bSJed Brown     test:
724c4762a1bSJed Brown       suffix: glvis_3d_tet_per
72530602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary
726c4762a1bSJed Brown     test:
727c4762a1bSJed Brown       suffix: glvis_3d_tet_per_mfem
728c4762a1bSJed Brown       TODO: broken
72930602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -viewer_glvis_dm_plex_enable_mfem -dm_view glvis:
730c4762a1bSJed Brown     test:
731c4762a1bSJed Brown       suffix: glvis_3d_hex
73230602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_view glvis:
733c4762a1bSJed Brown     test:
734c4762a1bSJed Brown       suffix: glvis_3d_hex_per
73530602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_plex_box_bd periodic,periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 0
736c4762a1bSJed Brown     test:
737c4762a1bSJed Brown       suffix: glvis_3d_hex_per_mfem
73830602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_plex_box_bd periodic,periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem
73930602db0SMatthew G. Knepley     test:
74030602db0SMatthew G. Knepley       suffix: glvis_2d_hyb
74130602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary
74230602db0SMatthew G. Knepley     test:
74330602db0SMatthew G. Knepley       suffix: glvis_3d_hyb
74430602db0SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary
74530602db0SMatthew G. Knepley     test:
74630602db0SMatthew G. Knepley       suffix: glvis_3d_hyb_s2t
747012bc364SMatthew G. Knepley       args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_3d_cube.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all
748c4762a1bSJed Brown 
749c4762a1bSJed Brown   # Test P4EST
750c4762a1bSJed Brown   testset:
751c4762a1bSJed Brown     requires: p4est
75230602db0SMatthew G. Knepley     args: -dm_coord_space 0 -dm_view -test_p4est_seq -conv_seq_2_dm_plex_check_all -conv_seq_1_dm_forest_minimum_refinement 1
753c4762a1bSJed Brown     test:
754c4762a1bSJed Brown       suffix: p4est_periodic
75530602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash
756c4762a1bSJed Brown     test:
757c4762a1bSJed Brown       suffix: p4est_periodic_3d
75830602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,none -dm_plex_box_faces 3,5,4 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash
759c4762a1bSJed Brown     test:
760c4762a1bSJed Brown       suffix: p4est_gmsh_periodic
76130602db0SMatthew G. Knepley       args: -dm_coord_space 0 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh
762c4762a1bSJed Brown     test:
763c4762a1bSJed Brown       suffix: p4est_gmsh_surface
76430602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3
765c4762a1bSJed Brown     test:
766c4762a1bSJed Brown       suffix: p4est_gmsh_surface_parallel
767c4762a1bSJed Brown       nsize: 2
76830602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -petscpartitioner_type simple -dm_view ::load_balance
769c4762a1bSJed Brown     test:
770c4762a1bSJed Brown       suffix: p4est_hyb_2d
77130602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh
772c4762a1bSJed Brown     test:
773c4762a1bSJed Brown       suffix: p4est_hyb_3d
77430602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh
775c4762a1bSJed Brown     test:
776c4762a1bSJed Brown       requires: ctetgen
777c4762a1bSJed Brown       suffix: p4est_s2t_bugfaces_3d
77830602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 0 -dm_plex_dim 3 -dm_plex_box_faces 1,1
779c4762a1bSJed Brown     test:
780c4762a1bSJed Brown       suffix: p4est_bug_overlapsf
781c4762a1bSJed Brown       nsize: 3
78230602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 2,2,1 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple
783c4762a1bSJed Brown     test:
784c4762a1bSJed Brown       suffix: p4est_redistribute
785c4762a1bSJed Brown       nsize: 3
7865a107427SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 2,2,1 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple -test_redistribute -dm_plex_csr_alg {{mat graph overlap}} -dm_view ::load_balance
787c4762a1bSJed Brown     test:
788c4762a1bSJed Brown       suffix: p4est_gmsh_s2t_3d
78930602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
790c4762a1bSJed Brown     test:
791c4762a1bSJed Brown       suffix: p4est_gmsh_s2t_3d_hash
79230602db0SMatthew G. Knepley       args: -conv_seq_1_dm_forest_initial_refinement 1 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
793c4762a1bSJed Brown     test:
794c4762a1bSJed Brown       requires: long_runtime
795c4762a1bSJed Brown       suffix: p4est_gmsh_periodic_3d
79630602db0SMatthew G. Knepley       args: -dm_coord_space 0 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh
797c4762a1bSJed Brown 
798c4762a1bSJed Brown   testset:
799c4762a1bSJed Brown     requires: p4est
800c4762a1bSJed Brown     nsize: 6
80130602db0SMatthew G. Knepley     args: -dm_coord_space 0 -test_p4est_par -conv_par_2_dm_plex_check_all -conv_par_1_dm_forest_minimum_refinement 1 -conv_par_1_dm_forest_partition_overlap 0 -dist_dm_distribute
802c4762a1bSJed Brown     test:
80354fcfd0cSMatthew G. Knepley       TODO: interface cones do not conform
804c4762a1bSJed Brown       suffix: p4est_par_periodic
80530602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash
806c4762a1bSJed Brown     test:
80754fcfd0cSMatthew G. Knepley       TODO: interface cones do not conform
808c4762a1bSJed Brown       suffix: p4est_par_periodic_3d
80930602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,periodic -dm_plex_box_faces 3,5,4 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash
810c4762a1bSJed Brown     test:
81154fcfd0cSMatthew G. Knepley       TODO: interface cones do not conform
812c4762a1bSJed Brown       suffix: p4est_par_gmsh_periodic
81330602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh
814c4762a1bSJed Brown     test:
815c4762a1bSJed Brown       suffix: p4est_par_gmsh_surface
81630602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3
817c4762a1bSJed Brown     test:
818c4762a1bSJed Brown       suffix: p4est_par_gmsh_s2t_3d
81930602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
820c4762a1bSJed Brown     test:
82154fcfd0cSMatthew G. Knepley       TODO: interface cones do not conform
822c4762a1bSJed Brown       suffix: p4est_par_gmsh_s2t_3d_hash
82330602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 1 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
824c4762a1bSJed Brown     test:
825c4762a1bSJed Brown       requires: long_runtime
826c4762a1bSJed Brown       suffix: p4est_par_gmsh_periodic_3d
82730602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh
828c4762a1bSJed Brown 
829c4762a1bSJed Brown   testset:
830c4762a1bSJed Brown     requires: p4est
831c4762a1bSJed Brown     nsize: 6
83230602db0SMatthew G. Knepley     args: -dm_coord_space 0 -test_p4est_par -conv_par_2_dm_plex_check_all -conv_par_1_dm_forest_minimum_refinement 1 -conv_par_1_dm_forest_partition_overlap 1 -dist_dm_distribute -petscpartitioner_type simple
833c4762a1bSJed Brown     test:
834c4762a1bSJed Brown       suffix: p4est_par_ovl_periodic
83530602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash
836c4762a1bSJed Brown     #TODO Mesh cell 201 is inverted, vol = 0. (FVM Volume. Is it correct? -> Diagnostics disabled)
837c4762a1bSJed Brown     test:
838c4762a1bSJed Brown       suffix: p4est_par_ovl_periodic_3d
83930602db0SMatthew G. Knepley       args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,none -dm_plex_box_faces 3,5,4 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -final_diagnostics 0
840c4762a1bSJed Brown     test:
841c4762a1bSJed Brown       suffix: p4est_par_ovl_gmsh_periodic
84230602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh
843c4762a1bSJed Brown     test:
844c4762a1bSJed Brown       suffix: p4est_par_ovl_gmsh_surface
84530602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3
846c4762a1bSJed Brown     test:
847c4762a1bSJed Brown       suffix: p4est_par_ovl_gmsh_s2t_3d
84830602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
849c4762a1bSJed Brown     test:
850c4762a1bSJed Brown       suffix: p4est_par_ovl_gmsh_s2t_3d_hash
85130602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 1 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh
852c4762a1bSJed Brown     test:
853c4762a1bSJed Brown       requires: long_runtime
854c4762a1bSJed Brown       suffix: p4est_par_ovl_gmsh_periodic_3d
85530602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh
856c4762a1bSJed Brown     test:
857c4762a1bSJed Brown       suffix: p4est_par_ovl_hyb_2d
85830602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh
859c4762a1bSJed Brown     test:
860c4762a1bSJed Brown       suffix: p4est_par_ovl_hyb_3d
86130602db0SMatthew G. Knepley       args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh
862c4762a1bSJed Brown 
863c4762a1bSJed Brown   test:
864c4762a1bSJed Brown     TODO: broken
865c4762a1bSJed Brown     requires: p4est
866c4762a1bSJed Brown     nsize: 2
867c4762a1bSJed Brown     suffix: p4est_bug_labels_noovl
86830602db0SMatthew G. Knepley     args: -test_p4est_seq -dm_plex_check_all -dm_forest_minimum_refinement 0 -dm_forest_partition_overlap 1 -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_forest_initial_refinement 0 -dm_forest_maximum_refinement 2 -dm_p4est_refine_pattern hash -dist_dm_distribute -petscpartitioner_type simple -dm_forest_print_label_error
869c4762a1bSJed Brown 
870c4762a1bSJed Brown   test:
871c4762a1bSJed Brown     requires: p4est
872c4762a1bSJed Brown     nsize: 2
873c4762a1bSJed Brown     suffix: p4est_bug_distribute_overlap
87430602db0SMatthew G. Knepley     args: -dm_coord_space 0 -test_p4est_seq -conv_seq_2_dm_plex_check_all -conv_seq_1_dm_forest_minimum_refinement 0 -conv_seq_1_dm_forest_partition_overlap 0 -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple -overlap 1 -dm_view ::load_balance
875c4762a1bSJed Brown     args: -dm_post_overlap_view
876c4762a1bSJed Brown 
877c4762a1bSJed Brown   test:
878595782ffSMatthew G. Knepley     suffix: ref_alfeld2d_0
879595782ffSMatthew G. Knepley     requires: triangle
880012bc364SMatthew G. Knepley     args: -dm_plex_box_faces 5,3 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_alfeld -final_diagnostics
881595782ffSMatthew G. Knepley   test:
882595782ffSMatthew G. Knepley     suffix: ref_alfeld3d_0
883595782ffSMatthew G. Knepley     requires: ctetgen
884012bc364SMatthew G. Knepley     args: -dm_plex_dim 3 -dm_plex_box_faces 5,1,1 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_alfeld -final_diagnostics
885595782ffSMatthew G. Knepley 
88609c713e7SStefano Zampini   # Boundary layer refiners
88709c713e7SStefano Zampini   test:
88809c713e7SStefano Zampini     suffix: ref_bl_1
889d410b0cfSMatthew G. Knepley     args: -dm_plex_dim 1 -dm_plex_simplex 0 -dm_plex_box_faces 5,1 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 2 -final_diagnostics -ref_dm_plex_transform_bl_splits 3
89009c713e7SStefano Zampini   test:
89109c713e7SStefano Zampini     suffix: ref_bl_2_tri
89209c713e7SStefano Zampini     requires: triangle
893d410b0cfSMatthew G. Knepley     args: -dm_plex_box_faces 5,3 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 3 -final_diagnostics -ref_dm_plex_transform_bl_splits 4
89409c713e7SStefano Zampini   test:
89509c713e7SStefano Zampini     suffix: ref_bl_3_quad
896d410b0cfSMatthew G. Knepley     args: -dm_plex_simplex 0 -dm_plex_box_faces 5,1 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 3 -final_diagnostics -ref_dm_plex_transform_bl_splits 4
89709c713e7SStefano Zampini   test:
89809c713e7SStefano Zampini     suffix: ref_bl_spheresurface_extruded
89909c713e7SStefano Zampini     nsize : 4
900d410b0cfSMatthew G. Knepley     args: -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple -final_diagnostics -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -ref_dm_plex_transform_bl_splits 2
90109c713e7SStefano Zampini   test:
90209c713e7SStefano Zampini     suffix: ref_bl_3d_hyb
90309c713e7SStefano Zampini     nsize : 4
904012bc364SMatthew G. Knepley     args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_3d_cube.msh -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple -final_diagnostics -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -ref_dm_plex_transform_bl_splits 4 -ref_dm_plex_transform_bl_height_factor 3.1
9050e278f6aSMatthew G. Knepley 
90630602db0SMatthew G. Knepley   testset:
90730602db0SMatthew G. Knepley     args: -dm_plex_shape sphere -dm_plex_check_all -dm_view
9080e278f6aSMatthew G. Knepley     test:
9090e278f6aSMatthew G. Knepley       suffix: sphere_0
91030602db0SMatthew G. Knepley       args:
9110e278f6aSMatthew G. Knepley     test:
9120e278f6aSMatthew G. Knepley       suffix: sphere_1
91330602db0SMatthew G. Knepley       args: -ref_dm_refine 2
9140e278f6aSMatthew G. Knepley     test:
91568317524SMatthew G. Knepley       suffix: sphere_2
91630602db0SMatthew G. Knepley       args: -dm_plex_simplex 0
91768317524SMatthew G. Knepley     test:
91868317524SMatthew G. Knepley       suffix: sphere_3
91930602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -ref_dm_refine 2
92068317524SMatthew G. Knepley 
92168317524SMatthew G. Knepley   test:
9220e278f6aSMatthew G. Knepley     suffix: ball_0
9230e278f6aSMatthew G. Knepley     requires: ctetgen
92430602db0SMatthew G. Knepley     args: -dm_plex_dim 3 -dm_plex_shape ball -dm_plex_check_all -dm_view
9250e278f6aSMatthew G. Knepley 
9260e278f6aSMatthew G. Knepley   test:
9270e278f6aSMatthew G. Knepley     suffix: ball_1
9280e278f6aSMatthew G. Knepley     requires: ctetgen
92930602db0SMatthew G. Knepley     args: -dm_plex_dim 3 -dm_plex_shape ball -bd_dm_refine 2 -dm_plex_check_all -dm_view
9300e278f6aSMatthew G. Knepley 
931*3fb88a6bSJed Brown   test:
932*3fb88a6bSJed Brown     suffix: schwarz_p_extrude
933*3fb88a6bSJed Brown     args: -dm_plex_shape schwarz_p -dm_plex_tps_extent 1,1,1 -dm_plex_tps_layers 1 -dm_plex_tps_thickness .2 -dm_view
934c4762a1bSJed Brown TEST*/
935