1c4762a1bSJed Brown static char help[] = "Tests various DMPlex routines to construct, refine and distribute a mesh.\n\n"; 2c4762a1bSJed Brown 3c4762a1bSJed Brown #include <petscdmplex.h> 4012bc364SMatthew G. Knepley #include <petscdmplextransform.h> 50a19bb7dSprj- #include <petscsf.h> 6c4762a1bSJed Brown 7c4762a1bSJed Brown enum {STAGE_LOAD, STAGE_DISTRIBUTE, STAGE_REFINE, STAGE_OVERLAP}; 8c4762a1bSJed Brown 9c4762a1bSJed Brown typedef struct { 10c4762a1bSJed Brown PetscLogEvent createMeshEvent; 11c4762a1bSJed Brown PetscLogStage stages[4]; 12c4762a1bSJed Brown /* Domain and mesh definition */ 13c4762a1bSJed Brown PetscInt dim; /* The topological mesh dimension */ 14c4762a1bSJed Brown PetscInt overlap; /* The cell overlap to use during partitioning */ 15c4762a1bSJed Brown PetscBool testp4est[2]; 16c4762a1bSJed Brown PetscBool redistribute; 17c4762a1bSJed Brown PetscBool final_ref; /* Run refinement at the end */ 18c4762a1bSJed Brown PetscBool final_diagnostics; /* Run diagnostics on the final mesh */ 19c4762a1bSJed Brown } AppCtx; 20c4762a1bSJed Brown 21c4762a1bSJed Brown PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options) 22c4762a1bSJed Brown { 23c4762a1bSJed Brown PetscErrorCode ierr; 24c4762a1bSJed Brown 25c4762a1bSJed Brown PetscFunctionBegin; 26c4762a1bSJed Brown options->dim = 2; 27c4762a1bSJed Brown options->overlap = 0; 28c4762a1bSJed Brown options->testp4est[0] = PETSC_FALSE; 29c4762a1bSJed Brown options->testp4est[1] = PETSC_FALSE; 30c4762a1bSJed Brown options->redistribute = PETSC_FALSE; 31c4762a1bSJed Brown options->final_ref = PETSC_FALSE; 32c4762a1bSJed Brown options->final_diagnostics = PETSC_TRUE; 33c4762a1bSJed Brown 34c4762a1bSJed Brown ierr = PetscOptionsBegin(comm, "", "Meshing Problem Options", "DMPLEX");CHKERRQ(ierr); 35c4762a1bSJed Brown ierr = PetscOptionsRangeInt("-dim", "The topological mesh dimension", "ex1.c", options->dim, &options->dim, NULL,1,3);CHKERRQ(ierr); 36c4762a1bSJed Brown ierr = PetscOptionsBoundedInt("-overlap", "The cell overlap for partitioning", "ex1.c", options->overlap, &options->overlap, NULL,0);CHKERRQ(ierr); 37c4762a1bSJed Brown ierr = PetscOptionsBool("-test_p4est_seq", "Test p4est with sequential base DM", "ex1.c", options->testp4est[0], &options->testp4est[0], NULL);CHKERRQ(ierr); 38c4762a1bSJed Brown ierr = PetscOptionsBool("-test_p4est_par", "Test p4est with parallel base DM", "ex1.c", options->testp4est[1], &options->testp4est[1], NULL);CHKERRQ(ierr); 39c4762a1bSJed Brown ierr = PetscOptionsBool("-test_redistribute", "Test redistribution", "ex1.c", options->redistribute, &options->redistribute, NULL);CHKERRQ(ierr); 40c4762a1bSJed Brown ierr = PetscOptionsBool("-final_ref", "Run uniform refinement on the final mesh", "ex1.c", options->final_ref, &options->final_ref, NULL);CHKERRQ(ierr); 41c4762a1bSJed Brown ierr = PetscOptionsBool("-final_diagnostics", "Run diagnostics on the final mesh", "ex1.c", options->final_diagnostics, &options->final_diagnostics, NULL);CHKERRQ(ierr); 421e1ea65dSPierre Jolivet ierr = PetscOptionsEnd();CHKERRQ(ierr); 43c4762a1bSJed Brown 44c4762a1bSJed Brown ierr = PetscLogEventRegister("CreateMesh", DM_CLASSID, &options->createMeshEvent);CHKERRQ(ierr); 45c4762a1bSJed Brown ierr = PetscLogStageRegister("MeshLoad", &options->stages[STAGE_LOAD]);CHKERRQ(ierr); 46c4762a1bSJed Brown ierr = PetscLogStageRegister("MeshDistribute", &options->stages[STAGE_DISTRIBUTE]);CHKERRQ(ierr); 47c4762a1bSJed Brown ierr = PetscLogStageRegister("MeshRefine", &options->stages[STAGE_REFINE]);CHKERRQ(ierr); 48c4762a1bSJed Brown ierr = PetscLogStageRegister("MeshOverlap", &options->stages[STAGE_OVERLAP]);CHKERRQ(ierr); 49c4762a1bSJed Brown PetscFunctionReturn(0); 50c4762a1bSJed Brown } 51c4762a1bSJed Brown 52c4762a1bSJed Brown PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm) 53c4762a1bSJed Brown { 54c4762a1bSJed Brown PetscInt dim = user->dim; 55c4762a1bSJed Brown PetscBool testp4est_seq = user->testp4est[0]; 56c4762a1bSJed Brown PetscBool testp4est_par = user->testp4est[1]; 57c4762a1bSJed Brown PetscMPIInt rank, size; 58db2bf62eSStefano Zampini PetscBool periodic; 59c4762a1bSJed Brown PetscErrorCode ierr; 60c4762a1bSJed Brown 61c4762a1bSJed Brown PetscFunctionBegin; 62c4762a1bSJed Brown ierr = PetscLogEventBegin(user->createMeshEvent,0,0,0,0);CHKERRQ(ierr); 63ffc4695bSBarry Smith ierr = MPI_Comm_rank(comm, &rank);CHKERRMPI(ierr); 64ffc4695bSBarry Smith ierr = MPI_Comm_size(comm, &size);CHKERRMPI(ierr); 65c4762a1bSJed Brown ierr = PetscLogStagePush(user->stages[STAGE_LOAD]);CHKERRQ(ierr); 6630602db0SMatthew G. Knepley ierr = DMCreate(comm, dm);CHKERRQ(ierr); 6730602db0SMatthew G. Knepley ierr = DMSetType(*dm, DMPLEX);CHKERRQ(ierr); 68e600fa54SMatthew G. Knepley ierr = DMPlexDistributeSetDefault(*dm, PETSC_FALSE);CHKERRQ(ierr); 6930602db0SMatthew G. Knepley ierr = DMSetFromOptions(*dm);CHKERRQ(ierr); 70db2bf62eSStefano Zampini 71db2bf62eSStefano Zampini /* For topologically periodic meshes, we first localize coordinates, 72db2bf62eSStefano Zampini and then remove any information related with the 73db2bf62eSStefano Zampini automatic computation of localized vertices. 74db2bf62eSStefano Zampini This way, refinement operations and conversions to p4est 75db2bf62eSStefano Zampini will preserve the shape of the domain in physical space */ 76db2bf62eSStefano Zampini ierr = DMLocalizeCoordinates(*dm);CHKERRQ(ierr); 77db2bf62eSStefano Zampini ierr = DMGetPeriodicity(*dm, &periodic, NULL, NULL, NULL);CHKERRQ(ierr); 7830602db0SMatthew G. Knepley if (periodic) {ierr = DMSetPeriodicity(*dm, PETSC_TRUE, NULL, NULL, NULL);CHKERRQ(ierr);} 79db2bf62eSStefano Zampini 80c4762a1bSJed Brown ierr = DMViewFromOptions(*dm,NULL,"-init_dm_view");CHKERRQ(ierr); 81c4762a1bSJed Brown ierr = DMGetDimension(*dm, &dim);CHKERRQ(ierr); 82c4762a1bSJed Brown 83c4762a1bSJed Brown if (testp4est_seq) { 84c4762a1bSJed Brown #if defined(PETSC_HAVE_P4EST) 85c4762a1bSJed Brown DM dmConv = NULL; 86c4762a1bSJed Brown 8754fcfd0cSMatthew G. Knepley ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr); 8854fcfd0cSMatthew G. Knepley ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr); 8954fcfd0cSMatthew G. Knepley ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr); 9054fcfd0cSMatthew G. Knepley ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr); 9154fcfd0cSMatthew G. Knepley ierr = DMPlexCheckPointSF(*dm);CHKERRQ(ierr); 9254fcfd0cSMatthew G. Knepley ierr = DMPlexCheckInterfaceCones(*dm);CHKERRQ(ierr); 93c4762a1bSJed Brown ierr = DMPlexSetRefinementUniform(*dm, PETSC_TRUE);CHKERRQ(ierr); 94012bc364SMatthew G. Knepley ierr = DMPlexSetTransformType(*dm, DMPLEXREFINETOBOX);CHKERRQ(ierr); 9554fcfd0cSMatthew G. Knepley ierr = DMRefine(*dm, PETSC_COMM_WORLD, &dmConv);CHKERRQ(ierr); 96012bc364SMatthew G. Knepley ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr); 97c4762a1bSJed Brown if (dmConv) { 98c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 99c4762a1bSJed Brown *dm = dmConv; 100c4762a1bSJed Brown } 10154fcfd0cSMatthew G. Knepley ierr = DMViewFromOptions(*dm,NULL,"-initref_dm_view");CHKERRQ(ierr); 10254fcfd0cSMatthew G. Knepley ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr); 10354fcfd0cSMatthew G. Knepley ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr); 10454fcfd0cSMatthew G. Knepley ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr); 10554fcfd0cSMatthew G. Knepley ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr); 10654fcfd0cSMatthew G. Knepley ierr = DMPlexCheckPointSF(*dm);CHKERRQ(ierr); 10754fcfd0cSMatthew G. Knepley ierr = DMPlexCheckInterfaceCones(*dm);CHKERRQ(ierr); 108c4762a1bSJed Brown 109c4762a1bSJed Brown ierr = DMConvert(*dm,dim == 2 ? DMP4EST : DMP8EST,&dmConv);CHKERRQ(ierr); 110c4762a1bSJed Brown if (dmConv) { 111c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_seq_1_");CHKERRQ(ierr); 112c4762a1bSJed Brown ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr); 113c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 114c4762a1bSJed Brown *dm = dmConv; 115c4762a1bSJed Brown } 116c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_seq_1_");CHKERRQ(ierr); 117c4762a1bSJed Brown ierr = DMSetUp(*dm);CHKERRQ(ierr); 118c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr); 119c4762a1bSJed Brown ierr = DMConvert(*dm,DMPLEX,&dmConv);CHKERRQ(ierr); 120c4762a1bSJed Brown if (dmConv) { 121c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_seq_2_");CHKERRQ(ierr); 122e600fa54SMatthew G. Knepley ierr = DMPlexDistributeSetDefault(dmConv, PETSC_FALSE);CHKERRQ(ierr); 123c4762a1bSJed Brown ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr); 124c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 125c4762a1bSJed Brown *dm = dmConv; 126c4762a1bSJed Brown } 127c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_seq_2_");CHKERRQ(ierr); 128c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr); 129c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr); 130c4762a1bSJed Brown #else 131c4762a1bSJed Brown SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Recompile with --download-p4est"); 132c4762a1bSJed Brown #endif 133c4762a1bSJed Brown } 134c4762a1bSJed Brown 135c4762a1bSJed Brown ierr = PetscLogStagePop();CHKERRQ(ierr); 136c4762a1bSJed Brown if (!testp4est_seq) { 137c4762a1bSJed Brown ierr = PetscLogStagePush(user->stages[STAGE_DISTRIBUTE]);CHKERRQ(ierr); 138c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_pre_dist_view");CHKERRQ(ierr); 13930602db0SMatthew G. Knepley ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "dist_");CHKERRQ(ierr); 14030602db0SMatthew G. Knepley ierr = DMSetFromOptions(*dm);CHKERRQ(ierr); 14130602db0SMatthew G. Knepley ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr); 142c4762a1bSJed Brown ierr = PetscLogStagePop();CHKERRQ(ierr); 143c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-distributed_dm_view");CHKERRQ(ierr); 144c4762a1bSJed Brown } 145c4762a1bSJed Brown ierr = PetscLogStagePush(user->stages[STAGE_REFINE]);CHKERRQ(ierr); 14630602db0SMatthew G. Knepley ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "ref_");CHKERRQ(ierr); 147c4762a1bSJed Brown ierr = DMSetFromOptions(*dm);CHKERRQ(ierr); 14830602db0SMatthew G. Knepley ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr); 149c4762a1bSJed Brown ierr = PetscLogStagePop();CHKERRQ(ierr); 150c4762a1bSJed Brown 151c4762a1bSJed Brown if (testp4est_par) { 152c4762a1bSJed Brown #if defined(PETSC_HAVE_P4EST) 153c4762a1bSJed Brown DM dmConv = NULL; 154c4762a1bSJed Brown 15596ca5757SLisandro Dalcin ierr = DMViewFromOptions(*dm, NULL, "-dm_tobox_view");CHKERRQ(ierr); 156c4762a1bSJed Brown ierr = DMPlexSetRefinementUniform(*dm, PETSC_TRUE);CHKERRQ(ierr); 157012bc364SMatthew G. Knepley ierr = DMPlexSetTransformType(*dm, DMPLEXREFINETOBOX);CHKERRQ(ierr); 15854fcfd0cSMatthew G. Knepley ierr = DMRefine(*dm, PETSC_COMM_WORLD, &dmConv);CHKERRQ(ierr); 159012bc364SMatthew G. Knepley ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr); 160c4762a1bSJed Brown if (dmConv) { 161c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 162c4762a1bSJed Brown *dm = dmConv; 163c4762a1bSJed Brown } 16496ca5757SLisandro Dalcin ierr = DMViewFromOptions(*dm, NULL, "-dm_tobox_view");CHKERRQ(ierr); 16554fcfd0cSMatthew G. Knepley ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr); 16654fcfd0cSMatthew G. Knepley ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr); 16754fcfd0cSMatthew G. Knepley ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr); 16854fcfd0cSMatthew G. Knepley ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr); 16954fcfd0cSMatthew G. Knepley ierr = DMPlexCheckPointSF(*dm);CHKERRQ(ierr); 17054fcfd0cSMatthew G. Knepley ierr = DMPlexCheckInterfaceCones(*dm);CHKERRQ(ierr); 171c4762a1bSJed Brown 172c4762a1bSJed Brown ierr = DMConvert(*dm,dim == 2 ? DMP4EST : DMP8EST,&dmConv);CHKERRQ(ierr); 173c4762a1bSJed Brown if (dmConv) { 174c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_par_1_");CHKERRQ(ierr); 175c4762a1bSJed Brown ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr); 176c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 177c4762a1bSJed Brown *dm = dmConv; 178c4762a1bSJed Brown } 179c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_par_1_");CHKERRQ(ierr); 180c4762a1bSJed Brown ierr = DMSetUp(*dm);CHKERRQ(ierr); 181c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr); 182c4762a1bSJed Brown ierr = DMConvert(*dm, DMPLEX, &dmConv);CHKERRQ(ierr); 183c4762a1bSJed Brown if (dmConv) { 184c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) dmConv, "conv_par_2_");CHKERRQ(ierr); 185e600fa54SMatthew G. Knepley ierr = DMPlexDistributeSetDefault(dmConv, PETSC_FALSE);CHKERRQ(ierr); 186c4762a1bSJed Brown ierr = DMSetFromOptions(dmConv);CHKERRQ(ierr); 187c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 188c4762a1bSJed Brown *dm = dmConv; 189c4762a1bSJed Brown } 190c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, "conv_par_2_");CHKERRQ(ierr); 191c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr); 192c4762a1bSJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject) *dm, NULL);CHKERRQ(ierr); 193c4762a1bSJed Brown #else 194c4762a1bSJed Brown SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_SUP,"Recompile with --download-p4est"); 195c4762a1bSJed Brown #endif 196c4762a1bSJed Brown } 197c4762a1bSJed Brown 198c4762a1bSJed Brown /* test redistribution of an already distributed mesh */ 199c4762a1bSJed Brown if (user->redistribute) { 200c4762a1bSJed Brown DM distributedMesh; 2010a19bb7dSprj- PetscSF sf; 2020a19bb7dSprj- PetscInt nranks; 203c4762a1bSJed Brown 204c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_pre_redist_view");CHKERRQ(ierr); 205c4762a1bSJed Brown ierr = DMPlexDistribute(*dm, 0, NULL, &distributedMesh);CHKERRQ(ierr); 206c4762a1bSJed Brown if (distributedMesh) { 2070a19bb7dSprj- ierr = DMGetPointSF(distributedMesh, &sf);CHKERRQ(ierr); 2080a19bb7dSprj- ierr = PetscSFSetUp(sf);CHKERRQ(ierr); 2090a19bb7dSprj- ierr = DMGetNeighbors(distributedMesh, &nranks, NULL);CHKERRQ(ierr); 210ffc4695bSBarry Smith ierr = MPI_Allreduce(MPI_IN_PLACE, &nranks, 1, MPIU_INT, MPI_MIN, PetscObjectComm((PetscObject)*dm));CHKERRMPI(ierr); 2110a19bb7dSprj- ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)*dm)), "Minimum number of neighbors: %D\n", nranks);CHKERRQ(ierr); 212c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 213c4762a1bSJed Brown *dm = distributedMesh; 214c4762a1bSJed Brown } 215c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_post_redist_view");CHKERRQ(ierr); 216c4762a1bSJed Brown } 217c4762a1bSJed Brown 218c4762a1bSJed Brown if (user->overlap) { 219c4762a1bSJed Brown DM overlapMesh = NULL; 220c4762a1bSJed Brown 221c4762a1bSJed Brown /* Add the overlap to refined mesh */ 222c4762a1bSJed Brown ierr = PetscLogStagePush(user->stages[STAGE_OVERLAP]);CHKERRQ(ierr); 223c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_pre_overlap_view");CHKERRQ(ierr); 224c4762a1bSJed Brown ierr = DMPlexDistributeOverlap(*dm, user->overlap, NULL, &overlapMesh);CHKERRQ(ierr); 225c4762a1bSJed Brown if (overlapMesh) { 226c4762a1bSJed Brown PetscInt overlap; 227c4762a1bSJed Brown ierr = DMPlexGetOverlap(overlapMesh, &overlap);CHKERRQ(ierr); 228c4762a1bSJed Brown ierr = PetscViewerASCIIPrintf(PETSC_VIEWER_STDOUT_WORLD, "Overlap: %D\n", overlap);CHKERRQ(ierr); 229c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 230c4762a1bSJed Brown *dm = overlapMesh; 231c4762a1bSJed Brown } 232c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_post_overlap_view");CHKERRQ(ierr); 233c4762a1bSJed Brown ierr = PetscLogStagePop();CHKERRQ(ierr); 234c4762a1bSJed Brown } 235c4762a1bSJed Brown if (user->final_ref) { 236c4762a1bSJed Brown DM refinedMesh = NULL; 237c4762a1bSJed Brown 238c4762a1bSJed Brown ierr = DMPlexSetRefinementUniform(*dm, PETSC_TRUE);CHKERRQ(ierr); 239c4762a1bSJed Brown ierr = DMRefine(*dm, comm, &refinedMesh);CHKERRQ(ierr); 240c4762a1bSJed Brown if (refinedMesh) { 241c4762a1bSJed Brown ierr = DMDestroy(dm);CHKERRQ(ierr); 242c4762a1bSJed Brown *dm = refinedMesh; 243c4762a1bSJed Brown } 244c4762a1bSJed Brown } 245c4762a1bSJed Brown 24652b05773SJed Brown ierr = PetscObjectSetName((PetscObject) *dm, "Generated Mesh");CHKERRQ(ierr); 247c4762a1bSJed Brown ierr = DMViewFromOptions(*dm, NULL, "-dm_view");CHKERRQ(ierr); 248c4762a1bSJed Brown if (user->final_diagnostics) { 249c4762a1bSJed Brown DMPlexInterpolatedFlag interpolated; 250c4762a1bSJed Brown PetscInt dim, depth; 251c4762a1bSJed Brown 252c4762a1bSJed Brown ierr = DMGetDimension(*dm, &dim);CHKERRQ(ierr); 253c4762a1bSJed Brown ierr = DMPlexGetDepth(*dm, &depth);CHKERRQ(ierr); 254c4762a1bSJed Brown ierr = DMPlexIsInterpolatedCollective(*dm, &interpolated);CHKERRQ(ierr); 255c4762a1bSJed Brown 256c4762a1bSJed Brown ierr = DMPlexCheckSymmetry(*dm);CHKERRQ(ierr); 257c4762a1bSJed Brown if (interpolated == DMPLEX_INTERPOLATED_FULL) { 258c4762a1bSJed Brown ierr = DMPlexCheckFaces(*dm, 0);CHKERRQ(ierr); 259c4762a1bSJed Brown } 260c4762a1bSJed Brown ierr = DMPlexCheckSkeleton(*dm, 0);CHKERRQ(ierr); 261c4762a1bSJed Brown ierr = DMPlexCheckGeometry(*dm);CHKERRQ(ierr); 262c4762a1bSJed Brown } 263c4762a1bSJed Brown ierr = PetscLogEventEnd(user->createMeshEvent,0,0,0,0);CHKERRQ(ierr); 264c4762a1bSJed Brown PetscFunctionReturn(0); 265c4762a1bSJed Brown } 266c4762a1bSJed Brown 267c4762a1bSJed Brown int main(int argc, char **argv) 268c4762a1bSJed Brown { 26930602db0SMatthew G. Knepley DM dm; 27030602db0SMatthew G. Knepley AppCtx user; 271c4762a1bSJed Brown PetscErrorCode ierr; 272c4762a1bSJed Brown 273c4762a1bSJed Brown ierr = PetscInitialize(&argc, &argv, NULL, help);if (ierr) return ierr; 274c4762a1bSJed Brown ierr = ProcessOptions(PETSC_COMM_WORLD, &user);CHKERRQ(ierr); 27530602db0SMatthew G. Knepley ierr = CreateMesh(PETSC_COMM_WORLD, &user, &dm);CHKERRQ(ierr); 27630602db0SMatthew G. Knepley ierr = DMDestroy(&dm);CHKERRQ(ierr); 277c4762a1bSJed Brown ierr = PetscFinalize(); 278c4762a1bSJed Brown return ierr; 279c4762a1bSJed Brown } 280c4762a1bSJed Brown 281c4762a1bSJed Brown /*TEST 282c4762a1bSJed Brown 283c4762a1bSJed Brown # CTetGen 0-1 284c4762a1bSJed Brown test: 285c4762a1bSJed Brown suffix: 0 286c4762a1bSJed Brown requires: ctetgen 28730602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_interpolate 0 -ctetgen_verbose 4 -dm_view ascii::ascii_info_detail -info :~sys 288c4762a1bSJed Brown test: 289c4762a1bSJed Brown suffix: 1 290c4762a1bSJed Brown requires: ctetgen 29130602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_interpolate 0 -ctetgen_verbose 4 -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail -info :~sys 292c4762a1bSJed Brown 293c4762a1bSJed Brown # 2D LaTex and ASCII output 2-9 294c4762a1bSJed Brown test: 295c4762a1bSJed Brown suffix: 2 296c4762a1bSJed Brown requires: triangle 29730602db0SMatthew G. Knepley args: -dm_plex_interpolate 0 -dm_view ascii::ascii_latex 298c4762a1bSJed Brown test: 299c4762a1bSJed Brown suffix: 3 300c4762a1bSJed Brown requires: triangle 30130602db0SMatthew G. Knepley args: -ref_dm_refine 1 -dm_view ascii::ascii_info_detail 302c4762a1bSJed Brown test: 303c4762a1bSJed Brown suffix: 4 304c4762a1bSJed Brown requires: triangle 305c4762a1bSJed Brown nsize: 2 30630602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_info_detail 307c4762a1bSJed Brown test: 308c4762a1bSJed Brown suffix: 5 309c4762a1bSJed Brown requires: triangle 310c4762a1bSJed Brown nsize: 2 31130602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_latex 312c4762a1bSJed Brown test: 313c4762a1bSJed Brown suffix: 6 31430602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_simplex 0 -dm_view ascii::ascii_info_detail 315c4762a1bSJed Brown test: 316c4762a1bSJed Brown suffix: 7 31730602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_simplex 0 -ref_dm_refine 1 -dm_view ascii::ascii_info_detail 318c4762a1bSJed Brown test: 319c4762a1bSJed Brown suffix: 8 320c4762a1bSJed Brown nsize: 2 32130602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_latex 322c4762a1bSJed Brown 323c4762a1bSJed Brown # 1D ASCII output 32430602db0SMatthew G. Knepley testset: 32530602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 1 -dm_view ascii::ascii_info_detail -dm_plex_check_all 326c4762a1bSJed Brown test: 327c4762a1bSJed Brown suffix: 1d_0 32830602db0SMatthew G. Knepley args: 329c4762a1bSJed Brown test: 330c4762a1bSJed Brown suffix: 1d_1 33130602db0SMatthew G. Knepley args: -ref_dm_refine 2 332c4762a1bSJed Brown test: 333c4762a1bSJed Brown suffix: 1d_2 33430602db0SMatthew G. Knepley args: -dm_plex_box_faces 5 -dm_plex_box_bd periodic 335c4762a1bSJed Brown 336c4762a1bSJed Brown # Parallel refinement tests with overlap 337c4762a1bSJed Brown test: 338c4762a1bSJed Brown suffix: refine_overlap_1d 339c4762a1bSJed Brown nsize: 2 34030602db0SMatthew G. Knepley args: -dm_plex_dim 1 -dim 1 -dm_plex_box_faces 4 -dm_plex_box_faces 4 -ref_dm_refine 1 -overlap {{0 1 2}separate output} -dist_dm_distribute -petscpartitioner_type simple -dm_view ascii::ascii_info 341c4762a1bSJed Brown test: 342c4762a1bSJed Brown suffix: refine_overlap_2d 343c4762a1bSJed Brown requires: triangle 344c4762a1bSJed Brown nsize: {{2 8}separate output} 34530602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -overlap {{0 1 2}separate output} -dm_view ascii::ascii_info 346c4762a1bSJed Brown 347d410b0cfSMatthew G. Knepley # Parallel extrusion tests 348d410b0cfSMatthew G. Knepley test: 349d410b0cfSMatthew G. Knepley suffix: spheresurface_extruded 350d410b0cfSMatthew G. Knepley nsize : 4 351d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_shape sphere -dm_extrude 3 -dist_dm_distribute -petscpartitioner_type simple \ 352d410b0cfSMatthew G. Knepley -dm_plex_check_all -dm_view ::ascii_info_detail -dm_plex_view_coord_system spherical 353d410b0cfSMatthew G. Knepley 354d410b0cfSMatthew G. Knepley test: 355d410b0cfSMatthew G. Knepley suffix: spheresurface_extruded_symmetric 356d410b0cfSMatthew G. Knepley nsize : 4 357d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_shape sphere -dm_extrude 3 -dm_plex_transform_extrude_symmetric -dist_dm_distribute -petscpartitioner_type simple \ 358d410b0cfSMatthew G. Knepley -dm_plex_check_all -dm_view ::ascii_info_detail -dm_plex_view_coord_system spherical 359d410b0cfSMatthew G. Knepley 360c4762a1bSJed Brown # Parallel simple partitioner tests 361c4762a1bSJed Brown test: 362c4762a1bSJed Brown suffix: part_simple_0 363c4762a1bSJed Brown requires: triangle 364c4762a1bSJed Brown nsize: 2 36530602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_interpolate 0 -dist_dm_distribute -petscpartitioner_type simple -dist_partition_view -dm_view ascii::ascii_info_detail 366c4762a1bSJed Brown test: 367c4762a1bSJed Brown suffix: part_simple_1 368c4762a1bSJed Brown requires: triangle 369c4762a1bSJed Brown nsize: 8 37030602db0SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type simple -dist_partition_view -dm_view ascii::ascii_info_detail 371c4762a1bSJed Brown 372c4762a1bSJed Brown # Parallel partitioner tests 373c4762a1bSJed Brown test: 374c4762a1bSJed Brown suffix: part_parmetis_0 375c4762a1bSJed Brown requires: parmetis 376c4762a1bSJed Brown nsize: 2 3775a107427SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type parmetis -dm_view -petscpartitioner_view -test_redistribute -dm_plex_csr_alg {{mat graph overlap}} -dm_pre_redist_view ::load_balance -dm_post_redist_view ::load_balance -petscpartitioner_view_graph 378c4762a1bSJed Brown test: 379c4762a1bSJed Brown suffix: part_ptscotch_0 380c4762a1bSJed Brown requires: ptscotch 381c4762a1bSJed Brown nsize: 2 3825a107427SMatthew G. Knepley args: -dm_plex_simplex 0 -dist_dm_distribute -petscpartitioner_type ptscotch -petscpartitioner_view -petscpartitioner_ptscotch_strategy quality -test_redistribute -dm_plex_csr_alg {{mat graph overlap}} -dm_pre_redist_view ::load_balance -dm_post_redist_view ::load_balance -petscpartitioner_view_graph 383c4762a1bSJed Brown test: 384c4762a1bSJed Brown suffix: part_ptscotch_1 385c4762a1bSJed Brown requires: ptscotch 386c4762a1bSJed Brown nsize: 8 38730602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 1 -dist_dm_distribute -petscpartitioner_type ptscotch -petscpartitioner_view -petscpartitioner_ptscotch_imbalance 0.1 388c4762a1bSJed Brown 389c4762a1bSJed Brown # CGNS reader tests 10-11 (need to find smaller test meshes) 390c4762a1bSJed Brown test: 391c4762a1bSJed Brown suffix: cgns_0 392c4762a1bSJed Brown requires: cgns 39330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/tut21.cgns -dm_view 394c4762a1bSJed Brown 395c4762a1bSJed Brown # Gmsh mesh reader tests 39630602db0SMatthew G. Knepley testset: 39730602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view 39830602db0SMatthew G. Knepley 399c4762a1bSJed Brown test: 400c4762a1bSJed Brown suffix: gmsh_0 401c4762a1bSJed Brown requires: !single 40230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 403c4762a1bSJed Brown test: 404c4762a1bSJed Brown suffix: gmsh_1 405c4762a1bSJed Brown requires: !single 40630602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.msh 407c4762a1bSJed Brown test: 408c4762a1bSJed Brown suffix: gmsh_2 409c4762a1bSJed Brown requires: !single 41030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh 411c4762a1bSJed Brown test: 412c4762a1bSJed Brown suffix: gmsh_3 413c4762a1bSJed Brown nsize: 3 414c4762a1bSJed Brown requires: !single 41530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.msh -dist_dm_distribute -petscpartitioner_type simple 416c4762a1bSJed Brown test: 417c4762a1bSJed Brown suffix: gmsh_4 418c4762a1bSJed Brown nsize: 3 419c4762a1bSJed Brown requires: !single 42030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dist_dm_distribute -petscpartitioner_type simple 421c4762a1bSJed Brown test: 422c4762a1bSJed Brown suffix: gmsh_5 423c4762a1bSJed Brown requires: !single 42430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_quad.msh 425c4762a1bSJed Brown # TODO: it seems the mesh is not a valid gmsh (inverted cell) 426c4762a1bSJed Brown test: 427c4762a1bSJed Brown suffix: gmsh_6 428c4762a1bSJed Brown requires: !single 42930602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin_physnames.msh -final_diagnostics 0 430c4762a1bSJed Brown test: 431c4762a1bSJed Brown suffix: gmsh_7 43230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_view ::ascii_info_detail -dm_plex_check_all 433c4762a1bSJed Brown test: 434c4762a1bSJed Brown suffix: gmsh_8 43530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh -dm_view ::ascii_info_detail -dm_plex_check_all 436c4762a1bSJed Brown testset: 43730602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic_bin.msh -dm_view ::ascii_info_detail -dm_plex_check_all 438c4762a1bSJed Brown test: 439c4762a1bSJed Brown suffix: gmsh_9 440c4762a1bSJed Brown test: 441c4762a1bSJed Brown suffix: gmsh_9_periodic_0 442c4762a1bSJed Brown args: -dm_plex_gmsh_periodic 0 443c4762a1bSJed Brown testset: 44430602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view ::ascii_info_detail -dm_plex_check_all 445c4762a1bSJed Brown test: 446c4762a1bSJed Brown suffix: gmsh_10 447c4762a1bSJed Brown test: 448c4762a1bSJed Brown suffix: gmsh_10_periodic_0 449c4762a1bSJed Brown args: -dm_plex_gmsh_periodic 0 450c4762a1bSJed Brown testset: 45130602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view ::ascii_info_detail -dm_plex_check_all -ref_dm_refine 1 452c4762a1bSJed Brown test: 453c4762a1bSJed Brown suffix: gmsh_11 454c4762a1bSJed Brown test: 455c4762a1bSJed Brown suffix: gmsh_11_periodic_0 456c4762a1bSJed Brown args: -dm_plex_gmsh_periodic 0 457c4762a1bSJed Brown # TODO: it seems the mesh is not a valid gmsh (inverted cell) 458c4762a1bSJed Brown test: 459c4762a1bSJed Brown suffix: gmsh_12 460c4762a1bSJed Brown nsize: 4 461c4762a1bSJed Brown requires: !single mpiio 46230602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin_physnames.msh -viewer_binary_mpiio -dist_dm_distribute -petscpartitioner_type simple -dm_view -final_diagnostics 0 463c4762a1bSJed Brown test: 464c4762a1bSJed Brown suffix: gmsh_13_hybs2t 465c4762a1bSJed Brown nsize: 4 466012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh -dist_dm_distribute -petscpartitioner_type simple -dm_view -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all 467c4762a1bSJed Brown test: 468c4762a1bSJed Brown suffix: gmsh_14_ext 469c4762a1bSJed Brown requires: !single 470d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude 2 -dm_plex_transform_extrude_thickness 1.5 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dm_view -dm_plex_check_all 471c4762a1bSJed Brown test: 472c4762a1bSJed Brown suffix: gmsh_14_ext_s2t 473c4762a1bSJed Brown requires: !single 474d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude 2 -dm_plex_transform_extrude_thickness 1.5 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_bin.msh -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox 475c4762a1bSJed Brown test: 476c4762a1bSJed Brown suffix: gmsh_15_hyb3d 47730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view -dm_plex_check_all 478c4762a1bSJed Brown test: 479c4762a1bSJed Brown suffix: gmsh_15_hyb3d_vtk 48030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view vtk: -dm_plex_gmsh_hybrid -dm_plex_check_all 481c4762a1bSJed Brown test: 482c4762a1bSJed Brown suffix: gmsh_15_hyb3d_s2t 483012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox 484c4762a1bSJed Brown test: 485c4762a1bSJed Brown suffix: gmsh_16_spheresurface 486c4762a1bSJed Brown nsize : 4 48730602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 488c4762a1bSJed Brown test: 489c4762a1bSJed Brown suffix: gmsh_16_spheresurface_s2t 490c4762a1bSJed Brown nsize : 4 491012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 492c4762a1bSJed Brown test: 493c4762a1bSJed Brown suffix: gmsh_16_spheresurface_extruded 494c4762a1bSJed Brown nsize : 4 495d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 496c4762a1bSJed Brown test: 497c4762a1bSJed Brown suffix: gmsh_16_spheresurface_extruded_s2t 498c4762a1bSJed Brown nsize : 4 499d410b0cfSMatthew G. Knepley args: -dm_coord_space 0 -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple 500c4762a1bSJed Brown test: 501c4762a1bSJed Brown suffix: gmsh_17_hyb3d_interp_ascii 50230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_hexwedge.msh -dm_view -dm_plex_check_all 503c4762a1bSJed Brown test: 504c4762a1bSJed Brown suffix: exodus_17_hyb3d_interp_ascii 505c4762a1bSJed Brown requires: exodusii 50630602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_hexwedge.exo -dm_view -dm_plex_check_all 507c4762a1bSJed Brown 508c4762a1bSJed Brown # Legacy Gmsh v22/v40 ascii/binary reader tests 509c4762a1bSJed Brown testset: 510c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_legacy.out 51130602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all 512c4762a1bSJed Brown test: 513c4762a1bSJed Brown suffix: gmsh_3d_ascii_v22 51430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh2 515c4762a1bSJed Brown test: 516c4762a1bSJed Brown suffix: gmsh_3d_ascii_v40 51730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh4 518c4762a1bSJed Brown test: 519c4762a1bSJed Brown suffix: gmsh_3d_binary_v22 52030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary.msh2 521c4762a1bSJed Brown test: 522c4762a1bSJed Brown suffix: gmsh_3d_binary_v40 523c4762a1bSJed Brown requires: long64 52430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary.msh4 525c4762a1bSJed Brown 526c4762a1bSJed Brown # Gmsh v41 ascii/binary reader tests 527c4762a1bSJed Brown testset: # 32bit mesh, sequential 52830602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all 529c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_32.out 530c4762a1bSJed Brown test: 531c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_32 53230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-32.msh 533c4762a1bSJed Brown test: 534c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32 53530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh 536c4762a1bSJed Brown test: 537c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32_mpiio 538dfd57a17SPierre Jolivet requires: defined(PETSC_HAVE_MPIIO) 53930602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh -viewer_binary_mpiio 5408cd392daSMatthew G. Knepley test: 5418cd392daSMatthew G. Knepley suffix: gmsh_quad_8node 5428cd392daSMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-qua-8node.msh \ 5438cd392daSMatthew G. Knepley -dm_view -dm_plex_check_all 5448cd392daSMatthew G. Knepley test: 5458cd392daSMatthew G. Knepley suffix: gmsh_hex_20node 5468cd392daSMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-hex-20node.msh \ 5478cd392daSMatthew G. Knepley -dm_view -dm_plex_check_all 548c4762a1bSJed Brown testset: # 32bit mesh, parallel 54930602db0SMatthew G. Knepley args: -dm_coord_space 0 -dist_dm_distribute -petscpartitioner_type simple -dm_view ::ascii_info_detail -dm_plex_check_all 550c4762a1bSJed Brown nsize: 2 551c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_32_np2.out 552c4762a1bSJed Brown test: 553c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_32_np2 55430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-32.msh 555c4762a1bSJed Brown test: 556c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32_np2 55730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh 558c4762a1bSJed Brown test: 559c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_32_np2_mpiio 560dfd57a17SPierre Jolivet requires: defined(PETSC_HAVE_MPIIO) 56130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh -viewer_binary_mpiio 562c4762a1bSJed Brown testset: # 64bit mesh, sequential 56330602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view ::ascii_info_detail -dm_plex_check_all 564c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_64.out 565c4762a1bSJed Brown test: 566c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_64 56730602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-64.msh 568c4762a1bSJed Brown test: 569c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64 57030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh 571c4762a1bSJed Brown test: 572c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64_mpiio 573dfd57a17SPierre Jolivet requires: defined(PETSC_HAVE_MPIIO) 57430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh -viewer_binary_mpiio 575c4762a1bSJed Brown testset: # 64bit mesh, parallel 57630602db0SMatthew G. Knepley args: -dm_coord_space 0 -dist_dm_distribute -petscpartitioner_type simple -dm_view ::ascii_info_detail -dm_plex_check_all 577c4762a1bSJed Brown nsize: 2 578c4762a1bSJed Brown output_file: output/ex1_gmsh_3d_64_np2.out 579c4762a1bSJed Brown test: 580c4762a1bSJed Brown suffix: gmsh_3d_ascii_v41_64_np2 58130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-ascii-64.msh 582c4762a1bSJed Brown test: 583c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64_np2 58430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh 585c4762a1bSJed Brown test: 586c4762a1bSJed Brown suffix: gmsh_3d_binary_v41_64_np2_mpiio 587dfd57a17SPierre Jolivet requires: defined(PETSC_HAVE_MPIIO) 58830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh -viewer_binary_mpiio 589c4762a1bSJed Brown 590c4762a1bSJed Brown # Fluent mesh reader tests 591c4762a1bSJed Brown # TODO: Geometry checks fail 592c4762a1bSJed Brown test: 593c4762a1bSJed Brown suffix: fluent_0 594c4762a1bSJed Brown requires: !complex 59530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.cas -dm_view -final_diagnostics 0 596c4762a1bSJed Brown test: 597c4762a1bSJed Brown suffix: fluent_1 598c4762a1bSJed Brown nsize: 3 599c4762a1bSJed Brown requires: !complex 60030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.cas -dist_dm_distribute -petscpartitioner_type simple -dm_view -final_diagnostics 0 601c4762a1bSJed Brown test: 602c4762a1bSJed Brown suffix: fluent_2 603c4762a1bSJed Brown requires: !complex 60430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cube_5tets_ascii.cas -dm_view -final_diagnostics 0 605c4762a1bSJed Brown test: 606c4762a1bSJed Brown suffix: fluent_3 607c4762a1bSJed Brown requires: !complex 608c4762a1bSJed Brown TODO: Fails on non-linux: fseek(), fileno() ? https://gitlab.com/petsc/petsc/merge_requests/2206#note_238166382 60930602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cube_5tets.cas -dm_view -final_diagnostics 0 610c4762a1bSJed Brown 611c4762a1bSJed Brown # Med mesh reader tests, including parallel file reads 612c4762a1bSJed Brown test: 613c4762a1bSJed Brown suffix: med_0 614c4762a1bSJed Brown requires: med 61530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.med -dm_view 616c4762a1bSJed Brown test: 617c4762a1bSJed Brown suffix: med_1 618c4762a1bSJed Brown requires: med 619c4762a1bSJed Brown nsize: 3 62030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square.med -dist_dm_distribute -petscpartitioner_type simple -dm_view 621c4762a1bSJed Brown test: 622c4762a1bSJed Brown suffix: med_2 623c4762a1bSJed Brown requires: med 62430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cylinder.med -dm_view 625c4762a1bSJed Brown test: 626c4762a1bSJed Brown suffix: med_3 627c4762a1bSJed Brown requires: med 628c4762a1bSJed Brown TODO: MED 629c4762a1bSJed Brown nsize: 3 63030602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/cylinder.med -dist_dm_distribute -petscpartitioner_type simple -dm_view 631c4762a1bSJed Brown 632c4762a1bSJed Brown # Test shape quality 633c4762a1bSJed Brown test: 634c4762a1bSJed Brown suffix: test_shape 635c4762a1bSJed Brown requires: ctetgen 63630602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dim 3 -dm_refine_hierarchy 3 -dm_plex_check_all -dm_plex_check_cell_shape 637c4762a1bSJed Brown 638c4762a1bSJed Brown # Test simplex to tensor conversion 639c4762a1bSJed Brown test: 640c4762a1bSJed Brown suffix: s2t2 641c4762a1bSJed Brown requires: triangle 642012bc364SMatthew G. Knepley args: -dm_coord_space 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail 643c4762a1bSJed Brown 644c4762a1bSJed Brown test: 645c4762a1bSJed Brown suffix: s2t3 646c4762a1bSJed Brown requires: ctetgen 647012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_refine_volume_limit_pre 0.0625 -dm_view ascii::ascii_info_detail 648c4762a1bSJed Brown 64930602db0SMatthew G. Knepley # Test cylinder 65030602db0SMatthew G. Knepley testset: 65130602db0SMatthew G. Knepley args: -dm_plex_shape cylinder -dm_plex_check_all -dm_view 652c4762a1bSJed Brown test: 653c4762a1bSJed Brown suffix: cylinder 65430602db0SMatthew G. Knepley args: -ref_dm_refine 1 655c4762a1bSJed Brown test: 656c4762a1bSJed Brown suffix: cylinder_per 65761a622f3SMatthew G. Knepley args: -dm_plex_cylinder_bd periodic -ref_dm_refine 1 -ref_dm_refine_remap 0 658c4762a1bSJed Brown test: 659c4762a1bSJed Brown suffix: cylinder_wedge 66061a622f3SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_interpolate 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk: 661c4762a1bSJed Brown test: 662c4762a1bSJed Brown suffix: cylinder_wedge_int 663c4762a1bSJed Brown output_file: output/ex1_cylinder_wedge.out 66461a622f3SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk: 665c4762a1bSJed Brown 666c4762a1bSJed Brown test: 667c4762a1bSJed Brown suffix: box_2d 66830602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 2 -dm_plex_check_all -dm_view 669c4762a1bSJed Brown 670c4762a1bSJed Brown test: 671c4762a1bSJed Brown suffix: box_2d_per 67230602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 2 -dm_plex_check_all -dm_view 673c4762a1bSJed Brown 674c4762a1bSJed Brown test: 675c4762a1bSJed Brown suffix: box_2d_per_unint 67630602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_simplex 0 -dm_plex_interpolate 0 -dm_plex_box_faces 3,3 -dm_plex_box_faces 3,3 -dm_plex_check_all -dm_view ::ascii_info_detail 677c4762a1bSJed Brown 678c4762a1bSJed Brown test: 679c4762a1bSJed Brown suffix: box_3d 68030602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dim 3 -dm_plex_simplex 0 -ref_dm_refine 3 -dm_plex_check_all -dm_view 681c4762a1bSJed Brown 682c4762a1bSJed Brown test: 683c4762a1bSJed Brown requires: triangle 684c4762a1bSJed Brown suffix: box_wedge 68561a622f3SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dim 3 -dm_plex_simplex 0 -dm_plex_cell tensor_triangular_prism -dm_view vtk: -dm_plex_check_all 686c4762a1bSJed Brown 687c4762a1bSJed Brown testset: 688c4762a1bSJed Brown requires: triangle 689012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_cell tensor_triangular_prism -dm_plex_box_faces 2,3,1 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox 690c4762a1bSJed Brown test: 691c4762a1bSJed Brown suffix: box_wedge_s2t 692c4762a1bSJed Brown test: 693c4762a1bSJed Brown nsize: 3 69430602db0SMatthew G. Knepley args: -dist_dm_distribute -petscpartitioner_type simple 695c4762a1bSJed Brown suffix: box_wedge_s2t_parallel 696c4762a1bSJed Brown 697c4762a1bSJed Brown # Test GLVis output 69830602db0SMatthew G. Knepley testset: 69930602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_interpolate 0 700c4762a1bSJed Brown test: 701c4762a1bSJed Brown suffix: glvis_2d_tet 70230602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_plex_gmsh_periodic 0 -dm_view glvis: 703c4762a1bSJed Brown test: 704c4762a1bSJed Brown suffix: glvis_2d_tet_per 70530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 0 706c4762a1bSJed Brown test: 707c4762a1bSJed Brown suffix: glvis_3d_tet 70830602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_plex_gmsh_periodic 0 -dm_view glvis: 70930602db0SMatthew G. Knepley testset: 71030602db0SMatthew G. Knepley args: -dm_coord_space 0 71130602db0SMatthew G. Knepley test: 71230602db0SMatthew G. Knepley suffix: glvis_2d_tet_per_mfem 71330602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem -dm_view glvis: 71430602db0SMatthew G. Knepley test: 71530602db0SMatthew G. Knepley suffix: glvis_2d_quad 71630602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_view glvis: 71730602db0SMatthew G. Knepley test: 71830602db0SMatthew G. Knepley suffix: glvis_2d_quad_per 71930602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_plex_box_bd periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 72030602db0SMatthew G. Knepley test: 72130602db0SMatthew G. Knepley suffix: glvis_2d_quad_per_mfem 72230602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_plex_box_bd periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem 723c4762a1bSJed Brown test: 724c4762a1bSJed Brown suffix: glvis_3d_tet_per 72530602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 726c4762a1bSJed Brown test: 727c4762a1bSJed Brown suffix: glvis_3d_tet_per_mfem 728c4762a1bSJed Brown TODO: broken 72930602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh -viewer_glvis_dm_plex_enable_mfem -dm_view glvis: 730c4762a1bSJed Brown test: 731c4762a1bSJed Brown suffix: glvis_3d_hex 73230602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_view glvis: 733c4762a1bSJed Brown test: 734c4762a1bSJed Brown suffix: glvis_3d_hex_per 73530602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_plex_box_bd periodic,periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 0 736c4762a1bSJed Brown test: 737c4762a1bSJed Brown suffix: glvis_3d_hex_per_mfem 73830602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 3,3,3 -dm_plex_box_bd periodic,periodic,periodic -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -viewer_glvis_dm_plex_enable_mfem 73930602db0SMatthew G. Knepley test: 74030602db0SMatthew G. Knepley suffix: glvis_2d_hyb 74130602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 74230602db0SMatthew G. Knepley test: 74330602db0SMatthew G. Knepley suffix: glvis_3d_hyb 74430602db0SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary 74530602db0SMatthew G. Knepley test: 74630602db0SMatthew G. Knepley suffix: glvis_3d_hyb_s2t 747012bc364SMatthew G. Knepley args: -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_3d_cube.msh -dm_view glvis: -viewer_glvis_dm_plex_enable_boundary -ref_dm_refine 1 -ref_dm_plex_transform_type refine_tobox -dm_plex_check_all 748c4762a1bSJed Brown 749c4762a1bSJed Brown # Test P4EST 750c4762a1bSJed Brown testset: 751c4762a1bSJed Brown requires: p4est 75230602db0SMatthew G. Knepley args: -dm_coord_space 0 -dm_view -test_p4est_seq -conv_seq_2_dm_plex_check_all -conv_seq_1_dm_forest_minimum_refinement 1 753c4762a1bSJed Brown test: 754c4762a1bSJed Brown suffix: p4est_periodic 75530602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash 756c4762a1bSJed Brown test: 757c4762a1bSJed Brown suffix: p4est_periodic_3d 75830602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,none -dm_plex_box_faces 3,5,4 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash 759c4762a1bSJed Brown test: 760c4762a1bSJed Brown suffix: p4est_gmsh_periodic 76130602db0SMatthew G. Knepley args: -dm_coord_space 0 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh 762c4762a1bSJed Brown test: 763c4762a1bSJed Brown suffix: p4est_gmsh_surface 76430602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 765c4762a1bSJed Brown test: 766c4762a1bSJed Brown suffix: p4est_gmsh_surface_parallel 767c4762a1bSJed Brown nsize: 2 76830602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -petscpartitioner_type simple -dm_view ::load_balance 769c4762a1bSJed Brown test: 770c4762a1bSJed Brown suffix: p4est_hyb_2d 77130602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh 772c4762a1bSJed Brown test: 773c4762a1bSJed Brown suffix: p4est_hyb_3d 77430602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh 775c4762a1bSJed Brown test: 776c4762a1bSJed Brown requires: ctetgen 777c4762a1bSJed Brown suffix: p4est_s2t_bugfaces_3d 77830602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 0 -dm_plex_dim 3 -dm_plex_box_faces 1,1 779c4762a1bSJed Brown test: 780c4762a1bSJed Brown suffix: p4est_bug_overlapsf 781c4762a1bSJed Brown nsize: 3 78230602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 2,2,1 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple 783c4762a1bSJed Brown test: 784c4762a1bSJed Brown suffix: p4est_redistribute 785c4762a1bSJed Brown nsize: 3 7865a107427SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_faces 2,2,1 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple -test_redistribute -dm_plex_csr_alg {{mat graph overlap}} -dm_view ::load_balance 787c4762a1bSJed Brown test: 788c4762a1bSJed Brown suffix: p4est_gmsh_s2t_3d 78930602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 790c4762a1bSJed Brown test: 791c4762a1bSJed Brown suffix: p4est_gmsh_s2t_3d_hash 79230602db0SMatthew G. Knepley args: -conv_seq_1_dm_forest_initial_refinement 1 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 793c4762a1bSJed Brown test: 794c4762a1bSJed Brown requires: long_runtime 795c4762a1bSJed Brown suffix: p4est_gmsh_periodic_3d 79630602db0SMatthew G. Knepley args: -dm_coord_space 0 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 1 -conv_seq_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh 797c4762a1bSJed Brown 798c4762a1bSJed Brown testset: 799c4762a1bSJed Brown requires: p4est 800c4762a1bSJed Brown nsize: 6 80130602db0SMatthew G. Knepley args: -dm_coord_space 0 -test_p4est_par -conv_par_2_dm_plex_check_all -conv_par_1_dm_forest_minimum_refinement 1 -conv_par_1_dm_forest_partition_overlap 0 -dist_dm_distribute 802c4762a1bSJed Brown test: 80354fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 804c4762a1bSJed Brown suffix: p4est_par_periodic 80530602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash 806c4762a1bSJed Brown test: 80754fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 808c4762a1bSJed Brown suffix: p4est_par_periodic_3d 80930602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,periodic -dm_plex_box_faces 3,5,4 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash 810c4762a1bSJed Brown test: 81154fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 812c4762a1bSJed Brown suffix: p4est_par_gmsh_periodic 81330602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh 814c4762a1bSJed Brown test: 815c4762a1bSJed Brown suffix: p4est_par_gmsh_surface 81630602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 817c4762a1bSJed Brown test: 818c4762a1bSJed Brown suffix: p4est_par_gmsh_s2t_3d 81930602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 820c4762a1bSJed Brown test: 82154fcfd0cSMatthew G. Knepley TODO: interface cones do not conform 822c4762a1bSJed Brown suffix: p4est_par_gmsh_s2t_3d_hash 82330602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 824c4762a1bSJed Brown test: 825c4762a1bSJed Brown requires: long_runtime 826c4762a1bSJed Brown suffix: p4est_par_gmsh_periodic_3d 82730602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh 828c4762a1bSJed Brown 829c4762a1bSJed Brown testset: 830c4762a1bSJed Brown requires: p4est 831c4762a1bSJed Brown nsize: 6 83230602db0SMatthew G. Knepley args: -dm_coord_space 0 -test_p4est_par -conv_par_2_dm_plex_check_all -conv_par_1_dm_forest_minimum_refinement 1 -conv_par_1_dm_forest_partition_overlap 1 -dist_dm_distribute -petscpartitioner_type simple 833c4762a1bSJed Brown test: 834c4762a1bSJed Brown suffix: p4est_par_ovl_periodic 83530602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic -dm_plex_box_faces 3,5 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash 836c4762a1bSJed Brown #TODO Mesh cell 201 is inverted, vol = 0. (FVM Volume. Is it correct? -> Diagnostics disabled) 837c4762a1bSJed Brown test: 838c4762a1bSJed Brown suffix: p4est_par_ovl_periodic_3d 83930602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_simplex 0 -dm_plex_box_bd periodic,periodic,none -dm_plex_box_faces 3,5,4 -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -final_diagnostics 0 840c4762a1bSJed Brown test: 841c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_periodic 84230602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/square_periodic.msh 843c4762a1bSJed Brown test: 844c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_surface 84530602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 846c4762a1bSJed Brown test: 847c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_s2t_3d 84830602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 849c4762a1bSJed Brown test: 850c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_s2t_3d_hash 85130602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 1 -conv_par_1_dm_forest_maximum_refinement 2 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/doublet-tet.msh 852c4762a1bSJed Brown test: 853c4762a1bSJed Brown requires: long_runtime 854c4762a1bSJed Brown suffix: p4est_par_ovl_gmsh_periodic_3d 85530602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh 856c4762a1bSJed Brown test: 857c4762a1bSJed Brown suffix: p4est_par_ovl_hyb_2d 85830602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_triquad.msh 859c4762a1bSJed Brown test: 860c4762a1bSJed Brown suffix: p4est_par_ovl_hyb_3d 86130602db0SMatthew G. Knepley args: -conv_par_1_dm_forest_initial_refinement 0 -conv_par_1_dm_forest_maximum_refinement 1 -conv_par_1_dm_p4est_refine_pattern hash -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_tetwedge.msh 862c4762a1bSJed Brown 863c4762a1bSJed Brown test: 864c4762a1bSJed Brown TODO: broken 865c4762a1bSJed Brown requires: p4est 866c4762a1bSJed Brown nsize: 2 867c4762a1bSJed Brown suffix: p4est_bug_labels_noovl 86830602db0SMatthew G. Knepley args: -test_p4est_seq -dm_plex_check_all -dm_forest_minimum_refinement 0 -dm_forest_partition_overlap 1 -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -dm_forest_initial_refinement 0 -dm_forest_maximum_refinement 2 -dm_p4est_refine_pattern hash -dist_dm_distribute -petscpartitioner_type simple -dm_forest_print_label_error 869c4762a1bSJed Brown 870c4762a1bSJed Brown test: 871c4762a1bSJed Brown requires: p4est 872c4762a1bSJed Brown nsize: 2 873c4762a1bSJed Brown suffix: p4est_bug_distribute_overlap 87430602db0SMatthew G. Knepley args: -dm_coord_space 0 -test_p4est_seq -conv_seq_2_dm_plex_check_all -conv_seq_1_dm_forest_minimum_refinement 0 -conv_seq_1_dm_forest_partition_overlap 0 -dm_plex_simplex 0 -dm_plex_box_faces 3,3 -conv_seq_1_dm_forest_initial_refinement 0 -conv_seq_1_dm_forest_maximum_refinement 2 -conv_seq_1_dm_p4est_refine_pattern hash -petscpartitioner_type simple -overlap 1 -dm_view ::load_balance 875c4762a1bSJed Brown args: -dm_post_overlap_view 876c4762a1bSJed Brown 877c4762a1bSJed Brown test: 878595782ffSMatthew G. Knepley suffix: ref_alfeld2d_0 879595782ffSMatthew G. Knepley requires: triangle 880012bc364SMatthew G. Knepley args: -dm_plex_box_faces 5,3 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_alfeld -final_diagnostics 881595782ffSMatthew G. Knepley test: 882595782ffSMatthew G. Knepley suffix: ref_alfeld3d_0 883595782ffSMatthew G. Knepley requires: ctetgen 884012bc364SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_box_faces 5,1,1 -dm_view -dm_plex_check_all -ref_dm_refine 1 -ref_dm_plex_transform_type refine_alfeld -final_diagnostics 885595782ffSMatthew G. Knepley 88609c713e7SStefano Zampini # Boundary layer refiners 88709c713e7SStefano Zampini test: 88809c713e7SStefano Zampini suffix: ref_bl_1 889d410b0cfSMatthew G. Knepley args: -dm_plex_dim 1 -dm_plex_simplex 0 -dm_plex_box_faces 5,1 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 2 -final_diagnostics -ref_dm_plex_transform_bl_splits 3 89009c713e7SStefano Zampini test: 89109c713e7SStefano Zampini suffix: ref_bl_2_tri 89209c713e7SStefano Zampini requires: triangle 893d410b0cfSMatthew G. Knepley args: -dm_plex_box_faces 5,3 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 3 -final_diagnostics -ref_dm_plex_transform_bl_splits 4 89409c713e7SStefano Zampini test: 89509c713e7SStefano Zampini suffix: ref_bl_3_quad 896d410b0cfSMatthew G. Knepley args: -dm_plex_simplex 0 -dm_plex_box_faces 5,1 -dm_view -dm_plex_check_all 0 -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -dm_extrude 3 -final_diagnostics -ref_dm_plex_transform_bl_splits 4 89709c713e7SStefano Zampini test: 89809c713e7SStefano Zampini suffix: ref_bl_spheresurface_extruded 89909c713e7SStefano Zampini nsize : 4 900d410b0cfSMatthew G. Knepley args: -dm_extrude 3 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/surfacesphere_bin.msh -dm_plex_gmsh_spacedim 3 -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple -final_diagnostics -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -ref_dm_plex_transform_bl_splits 2 90109c713e7SStefano Zampini test: 90209c713e7SStefano Zampini suffix: ref_bl_3d_hyb 90309c713e7SStefano Zampini nsize : 4 904012bc364SMatthew G. Knepley args: -dm_coord_space 0 -dm_plex_filename ${wPETSC_DIR}/share/petsc/datafiles/meshes/hybrid_3d_cube.msh -dm_plex_check_all -dm_view -dist_dm_distribute -petscpartitioner_type simple -final_diagnostics -ref_dm_refine 1 -ref_dm_plex_transform_type refine_boundary_layer -ref_dm_plex_transform_bl_splits 4 -ref_dm_plex_transform_bl_height_factor 3.1 9050e278f6aSMatthew G. Knepley 90630602db0SMatthew G. Knepley testset: 90730602db0SMatthew G. Knepley args: -dm_plex_shape sphere -dm_plex_check_all -dm_view 9080e278f6aSMatthew G. Knepley test: 9090e278f6aSMatthew G. Knepley suffix: sphere_0 91030602db0SMatthew G. Knepley args: 9110e278f6aSMatthew G. Knepley test: 9120e278f6aSMatthew G. Knepley suffix: sphere_1 91330602db0SMatthew G. Knepley args: -ref_dm_refine 2 9140e278f6aSMatthew G. Knepley test: 91568317524SMatthew G. Knepley suffix: sphere_2 91630602db0SMatthew G. Knepley args: -dm_plex_simplex 0 91768317524SMatthew G. Knepley test: 91868317524SMatthew G. Knepley suffix: sphere_3 91930602db0SMatthew G. Knepley args: -dm_plex_simplex 0 -ref_dm_refine 2 92068317524SMatthew G. Knepley 92168317524SMatthew G. Knepley test: 9220e278f6aSMatthew G. Knepley suffix: ball_0 9230e278f6aSMatthew G. Knepley requires: ctetgen 92430602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_shape ball -dm_plex_check_all -dm_view 9250e278f6aSMatthew G. Knepley 9260e278f6aSMatthew G. Knepley test: 9270e278f6aSMatthew G. Knepley suffix: ball_1 9280e278f6aSMatthew G. Knepley requires: ctetgen 92930602db0SMatthew G. Knepley args: -dm_plex_dim 3 -dm_plex_shape ball -bd_dm_refine 2 -dm_plex_check_all -dm_view 9300e278f6aSMatthew G. Knepley 931*3fb88a6bSJed Brown test: 932*3fb88a6bSJed Brown suffix: schwarz_p_extrude 933*3fb88a6bSJed Brown args: -dm_plex_shape schwarz_p -dm_plex_tps_extent 1,1,1 -dm_plex_tps_layers 1 -dm_plex_tps_thickness .2 -dm_view 934c4762a1bSJed Brown TEST*/ 935