xref: /petsc/src/dm/impls/plex/tests/ex35.c (revision 31d78bcd2b98084dc1368b20eb1129c8b9fb39fe)
142565d0bSMatthew G. Knepley static char help[] = "Exhaustive memory tracking for DMPlex.\n\n\n";
242565d0bSMatthew G. Knepley 
342565d0bSMatthew G. Knepley #include <petscdmplex.h>
442565d0bSMatthew G. Knepley 
EstimateMemory(DM dm,PetscLogDouble * est)5d71ae5a4SJacob Faibussowitsch static PetscErrorCode EstimateMemory(DM dm, PetscLogDouble *est)
6d71ae5a4SJacob Faibussowitsch {
742565d0bSMatthew G. Knepley   DMLabel  marker;
842565d0bSMatthew G. Knepley   PetscInt cdim, depth, d, pStart, pEnd, p, Nd[4] = {0, 0, 0, 0}, lsize = 0, rmem = 0, imem = 0;
942565d0bSMatthew G. Knepley   PetscInt coneSecMem = 0, coneMem = 0, supportSecMem = 0, supportMem = 0, labelMem = 0;
1042565d0bSMatthew G. Knepley 
1142565d0bSMatthew G. Knepley   PetscFunctionBeginUser;
129566063dSJacob Faibussowitsch   PetscCall(PetscPrintf(PETSC_COMM_SELF, "Memory Estimates\n"));
139566063dSJacob Faibussowitsch   PetscCall(DMGetCoordinateDim(dm, &cdim));
149566063dSJacob Faibussowitsch   PetscCall(DMPlexGetDepth(dm, &depth));
159566063dSJacob Faibussowitsch   PetscCall(DMPlexGetChart(dm, &pStart, &pEnd));
1642565d0bSMatthew G. Knepley   for (d = 0; d <= depth; ++d) {
1742565d0bSMatthew G. Knepley     PetscInt start, end;
1842565d0bSMatthew G. Knepley 
199566063dSJacob Faibussowitsch     PetscCall(DMPlexGetDepthStratum(dm, d, &start, &end));
2042565d0bSMatthew G. Knepley     Nd[d] = end - start;
2142565d0bSMatthew G. Knepley   }
2242565d0bSMatthew G. Knepley   /* Coordinates: 3 Nv reals + 2*Nv + 2*Nv ints */
2342565d0bSMatthew G. Knepley   rmem += cdim * Nd[0];
2442565d0bSMatthew G. Knepley   imem += 2 * Nd[0] + 2 * Nd[0];
2563a3b9bcSJacob Faibussowitsch   PetscCall(PetscPrintf(PETSC_COMM_SELF, "  Coordinate mem:  %" PetscInt_FMT " %" PetscInt_FMT "\n", (PetscInt)(cdim * Nd[0] * sizeof(PetscReal)), (PetscInt)(4 * Nd[0] * sizeof(PetscInt))));
2642565d0bSMatthew G. Knepley   /* Depth:       Nc+Nf+Ne+Nv ints */
2742565d0bSMatthew G. Knepley   for (d = 0; d <= depth; ++d) labelMem += Nd[d];
2842565d0bSMatthew G. Knepley   /* Cell Type:   Nc+Nf+Ne+Nv ints */
2942565d0bSMatthew G. Knepley   for (d = 0; d <= depth; ++d) labelMem += Nd[d];
3042565d0bSMatthew G. Knepley   /* Marker */
319566063dSJacob Faibussowitsch   PetscCall(DMGetLabel(dm, "marker", &marker));
329566063dSJacob Faibussowitsch   if (marker) PetscCall(DMLabelGetStratumSize(marker, 1, &lsize));
3342565d0bSMatthew G. Knepley   labelMem += lsize;
3463a3b9bcSJacob Faibussowitsch   PetscCall(PetscPrintf(PETSC_COMM_SELF, "  Label mem:       %" PetscInt_FMT "\n", (PetscInt)(labelMem * sizeof(PetscInt))));
3542565d0bSMatthew G. Knepley   //imem += labelMem;
3642565d0bSMatthew G. Knepley   /* Cones and Orientations:       4 Nc + 3 Nf + 2 Ne ints + (Nc+Nf+Ne) ints no separate orientation section */
3742565d0bSMatthew G. Knepley   for (d = 0; d <= depth; ++d) coneSecMem += 2 * Nd[d];
3842565d0bSMatthew G. Knepley   for (p = pStart; p < pEnd; ++p) {
3942565d0bSMatthew G. Knepley     PetscInt csize;
4042565d0bSMatthew G. Knepley 
419566063dSJacob Faibussowitsch     PetscCall(DMPlexGetConeSize(dm, p, &csize));
4242565d0bSMatthew G. Knepley     coneMem += csize;
4342565d0bSMatthew G. Knepley   }
4463a3b9bcSJacob Faibussowitsch   PetscCall(PetscPrintf(PETSC_COMM_SELF, "  Cone mem:        %" PetscInt_FMT " %" PetscInt_FMT " (%" PetscInt_FMT ")\n", (PetscInt)(coneMem * sizeof(PetscInt)), (PetscInt)(coneSecMem * sizeof(PetscInt)), (PetscInt)(coneMem * sizeof(PetscInt))));
4542565d0bSMatthew G. Knepley   imem += 2 * coneMem + coneSecMem;
4642565d0bSMatthew G. Knepley   /* Supports:       4 Nc + 3 Nf + 2 Ne ints + Nc+Nf+Ne ints */
4742565d0bSMatthew G. Knepley   for (d = 0; d <= depth; ++d) supportSecMem += 2 * Nd[d];
4842565d0bSMatthew G. Knepley   for (p = pStart; p < pEnd; ++p) {
4942565d0bSMatthew G. Knepley     PetscInt ssize;
5042565d0bSMatthew G. Knepley 
519566063dSJacob Faibussowitsch     PetscCall(DMPlexGetSupportSize(dm, p, &ssize));
5242565d0bSMatthew G. Knepley     supportMem += ssize;
5342565d0bSMatthew G. Knepley   }
5463a3b9bcSJacob Faibussowitsch   PetscCall(PetscPrintf(PETSC_COMM_SELF, "  Support mem:     %" PetscInt_FMT " %" PetscInt_FMT "\n", (PetscInt)(supportMem * sizeof(PetscInt)), (PetscInt)(supportSecMem * sizeof(PetscInt))));
5542565d0bSMatthew G. Knepley   imem += supportMem + supportSecMem;
5642565d0bSMatthew G. Knepley   *est = ((PetscLogDouble)imem) * sizeof(PetscInt) + ((PetscLogDouble)rmem) * sizeof(PetscReal);
5763a3b9bcSJacob Faibussowitsch   PetscCall(PetscPrintf(PETSC_COMM_WORLD, "  Estimated memory %" PetscInt_FMT "\n", (PetscInt)*est));
58*3ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
5942565d0bSMatthew G. Knepley }
6042565d0bSMatthew G. Knepley 
main(int argc,char ** argv)61d71ae5a4SJacob Faibussowitsch int main(int argc, char **argv)
62d71ae5a4SJacob Faibussowitsch {
6342565d0bSMatthew G. Knepley   DM             dm;
6442565d0bSMatthew G. Knepley   PetscBool      trace = PETSC_FALSE, checkMemory = PETSC_TRUE, auxMemory = PETSC_FALSE;
6542565d0bSMatthew G. Knepley   PetscLogDouble before, after, est                                       = 0, clean, max;
6642565d0bSMatthew G. Knepley 
67327415f7SBarry Smith   PetscFunctionBeginUser;
689566063dSJacob Faibussowitsch   PetscCall(PetscInitialize(&argc, &argv, NULL, help));
699566063dSJacob Faibussowitsch   PetscCall(PetscOptionsGetBool(NULL, NULL, "-trace", &trace, NULL));
709566063dSJacob Faibussowitsch   PetscCall(PetscOptionsGetBool(NULL, NULL, "-check_memory", &checkMemory, NULL));
719566063dSJacob Faibussowitsch   PetscCall(PetscOptionsGetBool(NULL, NULL, "-aux_memory", &auxMemory, NULL));
729566063dSJacob Faibussowitsch   PetscCall(PetscMemorySetGetMaximumUsage());
739566063dSJacob Faibussowitsch   PetscCall(PetscMallocGetCurrentUsage(&before));
749566063dSJacob Faibussowitsch   if (trace) PetscCall(PetscMallocTraceSet(NULL, PETSC_TRUE, 5000.));
759566063dSJacob Faibussowitsch   PetscCall(DMCreate(PETSC_COMM_WORLD, &dm));
769566063dSJacob Faibussowitsch   PetscCall(DMSetType(dm, DMPLEX));
779566063dSJacob Faibussowitsch   PetscCall(DMSetFromOptions(dm));
789566063dSJacob Faibussowitsch   if (trace) PetscCall(PetscMallocTraceSet(NULL, PETSC_FALSE, 5000));
799566063dSJacob Faibussowitsch   PetscCall(DMViewFromOptions(dm, NULL, "-dm_view"));
809566063dSJacob Faibussowitsch   PetscCall(PetscMallocGetCurrentUsage(&after));
819566063dSJacob Faibussowitsch   PetscCall(PetscMemoryGetMaximumUsage(&max));
829566063dSJacob Faibussowitsch   PetscCall(EstimateMemory(dm, &est));
839566063dSJacob Faibussowitsch   PetscCall(DMDestroy(&dm));
849566063dSJacob Faibussowitsch   PetscCall(PetscMallocGetCurrentUsage(&clean));
859566063dSJacob Faibussowitsch   PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Measured Memory\n"));
8642565d0bSMatthew G. Knepley   if (auxMemory) {
879371c9d4SSatish Balay     PetscCall(PetscPrintf(PETSC_COMM_WORLD, "  Initial memory         %" PetscInt_FMT "\n  Extra memory for build %" PetscInt_FMT "\n  Memory after destroy   %" PetscInt_FMT "\n", (PetscInt)before, (PetscInt)(max - after), (PetscInt)clean));
8842565d0bSMatthew G. Knepley   }
8942565d0bSMatthew G. Knepley   if (checkMemory) {
9063a3b9bcSJacob Faibussowitsch     PetscCall(PetscPrintf(PETSC_COMM_WORLD, "  Memory for mesh  %" PetscInt_FMT "\n", (PetscInt)(after - before)));
9163a3b9bcSJacob Faibussowitsch     PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Discrepancy %" PetscInt_FMT "\n", (PetscInt)PetscAbsReal(after - before - est)));
9242565d0bSMatthew G. Knepley   }
939566063dSJacob Faibussowitsch   PetscCall(PetscFinalize());
94b122ec5aSJacob Faibussowitsch   return 0;
9542565d0bSMatthew G. Knepley }
9642565d0bSMatthew G. Knepley 
9742565d0bSMatthew G. Knepley /*TEST
9842565d0bSMatthew G. Knepley   build:
99dfd57a17SPierre Jolivet     requires: !defined(PETSC_USE_64BIT_INDICES) double !complex !defined(PETSCTEST_VALGRIND)
10042565d0bSMatthew G. Knepley 
101a5b23f4aSJose E. Roman   # Memory checks cannot be included in tests because the allocated memory differs among environments
10242565d0bSMatthew G. Knepley   testset:
1036c2b77d5SStefano Zampini     requires: !defined(PETSC_HAVE_THREADSAFETY)
10442565d0bSMatthew G. Knepley     args: -malloc_requested_size -dm_plex_box_faces 5,5 -check_memory 0
10542565d0bSMatthew G. Knepley     test:
10642565d0bSMatthew G. Knepley       suffix: tri
10742565d0bSMatthew G. Knepley       requires: triangle
10830602db0SMatthew G. Knepley       args: -dm_plex_simplex 1 -dm_plex_interpolate 0
10942565d0bSMatthew G. Knepley 
11042565d0bSMatthew G. Knepley     test:
11142565d0bSMatthew G. Knepley       suffix: tri_interp
11242565d0bSMatthew G. Knepley       requires: triangle
11330602db0SMatthew G. Knepley       args: -dm_plex_simplex 1 -dm_plex_interpolate 1
11442565d0bSMatthew G. Knepley 
11542565d0bSMatthew G. Knepley     test:
11642565d0bSMatthew G. Knepley       suffix: quad
11730602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_interpolate 0
11842565d0bSMatthew G. Knepley 
11942565d0bSMatthew G. Knepley     test:
12042565d0bSMatthew G. Knepley       suffix: quad_interp
12130602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_interpolate 1
12242565d0bSMatthew G. Knepley 
12330602db0SMatthew G. Knepley   # Memory checks cannot be included in tests because the allocated memory differs among environments
12442565d0bSMatthew G. Knepley   testset:
1256c2b77d5SStefano Zampini     requires: !defined(PETSC_HAVE_THREADSAFETY)
12630602db0SMatthew G. Knepley     args: -malloc_requested_size -dm_plex_dim 3 -dm_plex_box_faces 5,5,5 -check_memory 0
127da87d8e5SMatthew G. Knepley 
128da87d8e5SMatthew G. Knepley     # Filter out label memory because tet mesher produce different surface meshes for different compilers
12942565d0bSMatthew G. Knepley     test:
13042565d0bSMatthew G. Knepley       suffix: tet
13142565d0bSMatthew G. Knepley       requires: ctetgen
132da87d8e5SMatthew G. Knepley       filter: grep -v "Label mem:"
13330602db0SMatthew G. Knepley       args: -dm_plex_simplex 1 -dm_plex_interpolate 0
13442565d0bSMatthew G. Knepley 
135da87d8e5SMatthew G. Knepley     # Filter out label memory because tet mesher produce different surface meshes for different compilers
13642565d0bSMatthew G. Knepley     test:
13742565d0bSMatthew G. Knepley       suffix: tet_interp
13842565d0bSMatthew G. Knepley       requires: ctetgen
139da87d8e5SMatthew G. Knepley       filter: grep -v "Label mem:"
14030602db0SMatthew G. Knepley       args: -dm_plex_simplex 1 -dm_plex_interpolate 1
14142565d0bSMatthew G. Knepley 
14242565d0bSMatthew G. Knepley     test:
14342565d0bSMatthew G. Knepley       suffix: hex
14430602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_interpolate 0
14542565d0bSMatthew G. Knepley 
14642565d0bSMatthew G. Knepley     test:
14742565d0bSMatthew G. Knepley       suffix: hex_interp
14830602db0SMatthew G. Knepley       args: -dm_plex_simplex 0 -dm_plex_interpolate 1
14942565d0bSMatthew G. Knepley TEST*/
150