1 #include <petsc/private/dmimpl.h> /*I "petscdm.h" I*/ 2 #include <petscds.h> 3 4 // Greatest common divisor of two nonnegative integers 5 PetscInt PetscGCD(PetscInt a, PetscInt b) 6 { 7 while (b != 0) { 8 PetscInt tmp = b; 9 b = a % b; 10 a = tmp; 11 } 12 return a; 13 } 14 15 PetscErrorCode DMCreateGlobalVector_Section_Private(DM dm, Vec *vec) 16 { 17 PetscSection gSection; 18 PetscInt localSize, bs, blockSize = -1, pStart, pEnd, p; 19 PetscInt in[2], out[2]; 20 21 PetscFunctionBegin; 22 PetscCall(DMGetGlobalSection(dm, &gSection)); 23 PetscCall(PetscSectionGetChart(gSection, &pStart, &pEnd)); 24 for (p = pStart; p < pEnd; ++p) { 25 PetscInt dof, cdof; 26 27 PetscCall(PetscSectionGetDof(gSection, p, &dof)); 28 PetscCall(PetscSectionGetConstraintDof(gSection, p, &cdof)); 29 30 if (dof - cdof > 0) { 31 if (blockSize < 0) { 32 /* set blockSize */ 33 blockSize = dof - cdof; 34 } else { 35 blockSize = PetscGCD(dof - cdof, blockSize); 36 } 37 } 38 } 39 40 // You cannot negate PETSC_INT_MIN 41 in[0] = blockSize < 0 ? -PETSC_INT_MAX : -blockSize; 42 in[1] = blockSize; 43 PetscCallMPI(MPIU_Allreduce(in, out, 2, MPIU_INT, MPI_MAX, PetscObjectComm((PetscObject)dm))); 44 /* -out[0] = min(blockSize), out[1] = max(blockSize) */ 45 if (-out[0] == out[1]) { 46 bs = out[1]; 47 } else bs = 1; 48 49 if (bs < 0) { /* Everyone was empty */ 50 blockSize = 1; 51 bs = 1; 52 } 53 54 PetscCall(PetscSectionGetConstrainedStorageSize(gSection, &localSize)); 55 PetscCheck(localSize % blockSize == 0, PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Mismatch between blocksize %" PetscInt_FMT " and local storage size %" PetscInt_FMT, blockSize, localSize); 56 PetscCall(VecCreate(PetscObjectComm((PetscObject)dm), vec)); 57 PetscCall(VecSetSizes(*vec, localSize, PETSC_DETERMINE)); 58 PetscCall(VecSetBlockSize(*vec, bs)); 59 PetscCall(VecSetType(*vec, dm->vectype)); 60 PetscCall(VecSetDM(*vec, dm)); 61 /* PetscCall(VecSetLocalToGlobalMapping(*vec, dm->ltogmap)); */ 62 PetscFunctionReturn(PETSC_SUCCESS); 63 } 64 65 PetscErrorCode DMCreateLocalVector_Section_Private(DM dm, Vec *vec) 66 { 67 PetscSection section; 68 PetscInt localSize, blockSize = -1, pStart, pEnd, p; 69 70 PetscFunctionBegin; 71 PetscCall(DMGetLocalSection(dm, §ion)); 72 PetscCall(PetscSectionGetChart(section, &pStart, &pEnd)); 73 for (p = pStart; p < pEnd; ++p) { 74 PetscInt dof; 75 76 PetscCall(PetscSectionGetDof(section, p, &dof)); 77 if ((blockSize < 0) && (dof > 0)) blockSize = dof; 78 if (dof > 0) blockSize = PetscGCD(dof, blockSize); 79 } 80 PetscCall(PetscSectionGetStorageSize(section, &localSize)); 81 PetscCall(VecCreate(PETSC_COMM_SELF, vec)); 82 PetscCall(VecSetSizes(*vec, localSize, localSize)); 83 PetscCall(VecSetBlockSize(*vec, PetscAbs(blockSize))); 84 PetscCall(VecSetType(*vec, dm->vectype)); 85 PetscCall(VecSetDM(*vec, dm)); 86 PetscFunctionReturn(PETSC_SUCCESS); 87 } 88 89 static PetscErrorCode PetscSectionSelectFields_Private(PetscSection s, PetscSection gs, PetscInt numFields, const PetscInt fields[], const PetscInt numComps[], const PetscInt comps[], IS *is) 90 { 91 PetscInt *subIndices; 92 PetscInt mbs, bs = 0, bsLocal[2], bsMinMax[2]; 93 PetscInt pStart, pEnd, Nc, subSize = 0, subOff = 0; 94 95 PetscFunctionBegin; 96 PetscCall(PetscSectionGetChart(gs, &pStart, &pEnd)); 97 if (numComps) { 98 for (PetscInt f = 0, off = 0; f < numFields; ++f) { 99 PetscInt Nc; 100 101 if (numComps[f] < 0) continue; 102 PetscCall(PetscSectionGetFieldComponents(s, f, &Nc)); 103 PetscCheck(numComps[f] <= Nc, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Field %" PetscInt_FMT ": Number of selected components %" PetscInt_FMT " > %" PetscInt_FMT " number of field components", f, numComps[f], Nc); 104 for (PetscInt c = 0; c < numComps[f]; ++c, ++off) PetscCheck(comps[off] < Nc, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Field %" PetscInt_FMT ": component %" PetscInt_FMT " not in [0, %" PetscInt_FMT ")", f, comps[off], Nc); 105 bs += numComps[f]; 106 } 107 } else { 108 for (PetscInt f = 0; f < numFields; ++f) { 109 PetscInt Nc; 110 111 PetscCall(PetscSectionGetFieldComponents(s, fields[f], &Nc)); 112 bs += Nc; 113 } 114 } 115 mbs = -1; /* multiple of block size not set */ 116 for (PetscInt p = pStart; p < pEnd; ++p) { 117 PetscInt gdof, pSubSize = 0; 118 119 PetscCall(PetscSectionGetDof(gs, p, &gdof)); 120 if (gdof > 0) { 121 PetscInt off = 0; 122 123 for (PetscInt f = 0; f < numFields; ++f) { 124 PetscInt fdof, fcdof, sfdof, sfcdof = 0; 125 126 PetscCall(PetscSectionGetFieldComponents(s, f, &Nc)); 127 PetscCall(PetscSectionGetFieldDof(s, p, fields[f], &fdof)); 128 PetscCall(PetscSectionGetFieldConstraintDof(s, p, fields[f], &fcdof)); 129 if (numComps && numComps[f] >= 0) { 130 const PetscInt *ind; 131 132 // Assume sets of dofs on points are of size Nc 133 PetscCheck(!(fdof % Nc), PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Number of components %" PetscInt_FMT " should evenly divide the dofs %" PetscInt_FMT " on point %" PetscInt_FMT, Nc, fdof, p); 134 sfdof = (fdof / Nc) * numComps[f]; 135 PetscCall(PetscSectionGetFieldConstraintIndices(s, p, fields[f], &ind)); 136 for (PetscInt i = 0; i < (fdof / Nc); ++i) { 137 for (PetscInt c = 0, fcc = 0; c < Nc; ++c) { 138 if (c == comps[off + fcc]) { 139 ++fcc; 140 ++sfcdof; 141 } 142 } 143 } 144 pSubSize += sfdof - sfcdof; 145 off += numComps[f]; 146 } else { 147 pSubSize += fdof - fcdof; 148 } 149 } 150 subSize += pSubSize; 151 if (pSubSize && pSubSize % bs) { 152 // Layout does not admit a pointwise block size -> set mbs to 0 153 mbs = 0; 154 } else if (pSubSize) { 155 if (mbs == -1) mbs = pSubSize / bs; 156 else mbs = PetscMin(mbs, pSubSize / bs); 157 } 158 } 159 } 160 161 // Must have same blocksize on all procs (some might have no points) 162 bsLocal[0] = mbs < 0 ? PETSC_INT_MAX : mbs; 163 bsLocal[1] = mbs; 164 PetscCall(PetscGlobalMinMaxInt(PetscObjectComm((PetscObject)gs), bsLocal, bsMinMax)); 165 if (bsMinMax[0] != bsMinMax[1]) { /* different multiple of block size -> set bs to 1 */ 166 bs = 1; 167 } else { /* same multiple */ 168 mbs = bsMinMax[0]; 169 bs *= mbs; 170 } 171 PetscCall(PetscMalloc1(subSize, &subIndices)); 172 for (PetscInt p = pStart; p < pEnd; ++p) { 173 PetscInt gdof, goff; 174 175 PetscCall(PetscSectionGetDof(gs, p, &gdof)); 176 if (gdof > 0) { 177 PetscInt off = 0; 178 179 PetscCall(PetscSectionGetOffset(gs, p, &goff)); 180 for (PetscInt f = 0; f < numFields; ++f) { 181 PetscInt fdof, fcdof, poff = 0; 182 183 /* Can get rid of this loop by storing field information in the global section */ 184 for (PetscInt f2 = 0; f2 < fields[f]; ++f2) { 185 PetscCall(PetscSectionGetFieldDof(s, p, f2, &fdof)); 186 PetscCall(PetscSectionGetFieldConstraintDof(s, p, f2, &fcdof)); 187 poff += fdof - fcdof; 188 } 189 PetscCall(PetscSectionGetFieldDof(s, p, fields[f], &fdof)); 190 PetscCall(PetscSectionGetFieldConstraintDof(s, p, fields[f], &fcdof)); 191 192 if (numComps && numComps[f] >= 0) { 193 const PetscInt *ind; 194 195 // Assume sets of dofs on points are of size Nc 196 PetscCall(PetscSectionGetFieldConstraintIndices(s, p, fields[f], &ind)); 197 for (PetscInt i = 0, fcoff = 0, pfoff = 0; i < (fdof / Nc); ++i) { 198 for (PetscInt c = 0, fcc = 0; c < Nc; ++c) { 199 const PetscInt k = i * Nc + c; 200 201 if (ind[fcoff] == k) { 202 ++fcoff; 203 continue; 204 } 205 if (c == comps[off + fcc]) { 206 ++fcc; 207 subIndices[subOff++] = goff + poff + pfoff; 208 } 209 ++pfoff; 210 } 211 } 212 off += numComps[f]; 213 } else { 214 for (PetscInt fc = 0; fc < fdof - fcdof; ++fc, ++subOff) subIndices[subOff] = goff + poff + fc; 215 } 216 } 217 } 218 } 219 PetscCheck(subSize == subOff, PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "The offset array size %" PetscInt_FMT " != %" PetscInt_FMT " the number of indices", subSize, subOff); 220 PetscCall(ISCreateGeneral(PetscObjectComm((PetscObject)gs), subSize, subIndices, PETSC_OWN_POINTER, is)); 221 if (bs > 1) { 222 // We need to check that the block size does not come from non-contiguous fields 223 PetscInt set = 1, rset = 1; 224 for (PetscInt i = 0; i < subSize; i += bs) { 225 for (PetscInt j = 0; j < bs; ++j) { 226 if (subIndices[i + j] != subIndices[i] + j) { 227 set = 0; 228 break; 229 } 230 } 231 } 232 PetscCallMPI(MPIU_Allreduce(&set, &rset, 1, MPIU_INT, MPI_PROD, PetscObjectComm((PetscObject)gs))); 233 if (rset) PetscCall(ISSetBlockSize(*is, bs)); 234 } 235 PetscFunctionReturn(PETSC_SUCCESS); 236 } 237 238 static PetscErrorCode DMSelectFields_Private(DM dm, PetscSection section, PetscInt numFields, const PetscInt fields[], const PetscInt numComps[], const PetscInt comps[], IS *is, DM *subdm) 239 { 240 PetscSection subsection; 241 PetscBool haveNull = PETSC_FALSE; 242 PetscInt nf = 0, of = 0; 243 244 PetscFunctionBegin; 245 if (numComps) { 246 const PetscInt field = fields[0]; 247 248 PetscCheck(numFields == 1, PETSC_COMM_SELF, PETSC_ERR_SUP, "We only support a single field for component selection right now"); 249 PetscCall(PetscSectionCreateComponentSubsection(section, numComps[field], comps, &subsection)); 250 PetscCall(DMSetLocalSection(*subdm, subsection)); 251 PetscCall(PetscSectionDestroy(&subsection)); 252 (*subdm)->nullspaceConstructors[field] = dm->nullspaceConstructors[field]; 253 if (dm->probs) { 254 PetscFV fv, fvNew; 255 PetscInt fnum[1] = {field}; 256 257 PetscCall(DMSetNumFields(*subdm, 1)); 258 PetscCall(DMGetField(dm, field, NULL, (PetscObject *)&fv)); 259 PetscCall(PetscFVClone(fv, &fvNew)); 260 PetscCall(PetscFVSetNumComponents(fvNew, numComps[0])); 261 PetscCall(DMSetField(*subdm, 0, NULL, (PetscObject)fvNew)); 262 PetscCall(PetscFVDestroy(&fvNew)); 263 PetscCall(DMCreateDS(*subdm)); 264 if (numComps[0] == 1 && is) { 265 PetscObject disc, space, pmat; 266 267 PetscCall(DMGetField(*subdm, field, NULL, &disc)); 268 PetscCall(PetscObjectQuery(disc, "nullspace", &space)); 269 if (space) PetscCall(PetscObjectCompose((PetscObject)*is, "nullspace", space)); 270 PetscCall(PetscObjectQuery(disc, "nearnullspace", &space)); 271 if (space) PetscCall(PetscObjectCompose((PetscObject)*is, "nearnullspace", space)); 272 PetscCall(PetscObjectQuery(disc, "pmat", &pmat)); 273 if (pmat) PetscCall(PetscObjectCompose((PetscObject)*is, "pmat", pmat)); 274 } 275 PetscCall(PetscDSCopyConstants(dm->probs[field].ds, (*subdm)->probs[0].ds)); 276 PetscCall(PetscDSCopyBoundary(dm->probs[field].ds, 1, fnum, (*subdm)->probs[0].ds)); 277 PetscCall(PetscDSSelectEquations(dm->probs[field].ds, 1, fnum, (*subdm)->probs[0].ds)); 278 } 279 if ((*subdm)->nullspaceConstructors[0] && is) { 280 MatNullSpace nullSpace; 281 282 PetscCall((*(*subdm)->nullspaceConstructors[0])(*subdm, 0, 0, &nullSpace)); 283 PetscCall(PetscObjectCompose((PetscObject)*is, "nullspace", (PetscObject)nullSpace)); 284 PetscCall(MatNullSpaceDestroy(&nullSpace)); 285 } 286 if (dm->coarseMesh) PetscCall(DMCreateSubDM(dm->coarseMesh, numFields, fields, NULL, &(*subdm)->coarseMesh)); 287 PetscFunctionReturn(PETSC_SUCCESS); 288 } 289 PetscCall(PetscSectionCreateSubsection(section, numFields, fields, &subsection)); 290 PetscCall(DMSetLocalSection(*subdm, subsection)); 291 PetscCall(PetscSectionDestroy(&subsection)); 292 for (PetscInt f = 0; f < numFields; ++f) { 293 (*subdm)->nullspaceConstructors[f] = dm->nullspaceConstructors[fields[f]]; 294 if ((*subdm)->nullspaceConstructors[f]) { 295 haveNull = PETSC_TRUE; 296 nf = f; 297 of = fields[f]; 298 } 299 } 300 if (dm->probs) { 301 PetscCall(DMSetNumFields(*subdm, numFields)); 302 for (PetscInt f = 0; f < numFields; ++f) { 303 PetscObject disc; 304 305 PetscCall(DMGetField(dm, fields[f], NULL, &disc)); 306 PetscCall(DMSetField(*subdm, f, NULL, disc)); 307 } 308 // TODO: if only FV, then cut down the components 309 PetscCall(DMCreateDS(*subdm)); 310 if (numFields == 1 && is) { 311 PetscObject disc, space, pmat; 312 313 PetscCall(DMGetField(*subdm, 0, NULL, &disc)); 314 PetscCall(PetscObjectQuery(disc, "nullspace", &space)); 315 if (space) PetscCall(PetscObjectCompose((PetscObject)*is, "nullspace", space)); 316 PetscCall(PetscObjectQuery(disc, "nearnullspace", &space)); 317 if (space) PetscCall(PetscObjectCompose((PetscObject)*is, "nearnullspace", space)); 318 PetscCall(PetscObjectQuery(disc, "pmat", &pmat)); 319 if (pmat) PetscCall(PetscObjectCompose((PetscObject)*is, "pmat", pmat)); 320 } 321 // Check if DSes record their DM fields 322 if (dm->probs[0].fields) { 323 PetscInt d, e; 324 325 for (d = 0, e = 0; d < dm->Nds && e < (*subdm)->Nds; ++d) { 326 const PetscInt Nf = dm->probs[d].ds->Nf; 327 const PetscInt *fld; 328 PetscInt f, g; 329 330 PetscCall(ISGetIndices(dm->probs[d].fields, &fld)); 331 for (f = 0; f < Nf; ++f) { 332 for (g = 0; g < numFields; ++g) 333 if (fld[f] == fields[g]) break; 334 if (g < numFields) break; 335 } 336 PetscCall(ISRestoreIndices(dm->probs[d].fields, &fld)); 337 if (f == Nf) continue; 338 PetscCall(PetscDSCopyConstants(dm->probs[d].ds, (*subdm)->probs[e].ds)); 339 PetscCall(PetscDSCopyBoundary(dm->probs[d].ds, numFields, fields, (*subdm)->probs[e].ds)); 340 // Translate DM fields to DS fields 341 { 342 IS infields, dsfields; 343 const PetscInt *fld, *ofld; 344 PetscInt *fidx; 345 PetscInt onf, nf; 346 347 PetscCall(ISCreateGeneral(PETSC_COMM_SELF, numFields, fields, PETSC_USE_POINTER, &infields)); 348 PetscCall(ISIntersect(infields, dm->probs[d].fields, &dsfields)); 349 PetscCall(ISDestroy(&infields)); 350 PetscCall(ISGetLocalSize(dsfields, &nf)); 351 PetscCheck(nf, PETSC_COMM_SELF, PETSC_ERR_PLIB, "DS cannot be supported on 0 fields"); 352 PetscCall(ISGetIndices(dsfields, &fld)); 353 PetscCall(ISGetLocalSize(dm->probs[d].fields, &onf)); 354 PetscCall(ISGetIndices(dm->probs[d].fields, &ofld)); 355 PetscCall(PetscMalloc1(nf, &fidx)); 356 for (PetscInt f = 0, g = 0; f < onf && g < nf; ++f) { 357 if (ofld[f] == fld[g]) fidx[g++] = f; 358 } 359 PetscCall(ISRestoreIndices(dm->probs[d].fields, &ofld)); 360 PetscCall(ISRestoreIndices(dsfields, &fld)); 361 PetscCall(ISDestroy(&dsfields)); 362 PetscCall(PetscDSSelectDiscretizations(dm->probs[0].ds, nf, fidx, PETSC_DETERMINE, PETSC_DETERMINE, (*subdm)->probs[0].ds)); 363 PetscCall(PetscDSSelectEquations(dm->probs[0].ds, nf, fidx, (*subdm)->probs[0].ds)); 364 PetscCall(PetscFree(fidx)); 365 } 366 ++e; 367 } 368 } else { 369 PetscCall(PetscDSCopyConstants(dm->probs[0].ds, (*subdm)->probs[0].ds)); 370 PetscCall(PetscDSCopyBoundary(dm->probs[0].ds, PETSC_DETERMINE, NULL, (*subdm)->probs[0].ds)); 371 PetscCall(PetscDSSelectDiscretizations(dm->probs[0].ds, numFields, fields, PETSC_DETERMINE, PETSC_DETERMINE, (*subdm)->probs[0].ds)); 372 PetscCall(PetscDSSelectEquations(dm->probs[0].ds, numFields, fields, (*subdm)->probs[0].ds)); 373 } 374 } 375 if (haveNull && is) { 376 MatNullSpace nullSpace; 377 378 PetscCall((*(*subdm)->nullspaceConstructors[nf])(*subdm, of, nf, &nullSpace)); 379 PetscCall(PetscObjectCompose((PetscObject)*is, "nullspace", (PetscObject)nullSpace)); 380 PetscCall(MatNullSpaceDestroy(&nullSpace)); 381 } 382 if (dm->coarseMesh) PetscCall(DMCreateSubDM(dm->coarseMesh, numFields, fields, NULL, &(*subdm)->coarseMesh)); 383 PetscFunctionReturn(PETSC_SUCCESS); 384 } 385 386 /*@ 387 DMCreateSectionSubDM - Returns an `IS` and `subDM` containing a `PetscSection` that encapsulates a subproblem defined by a subset of the fields in a `PetscSection` in the `DM`. 388 389 Not Collective 390 391 Input Parameters: 392 + dm - The `DM` object 393 . numFields - The number of fields to incorporate into `subdm` 394 . fields - The field numbers of the selected fields 395 . numComps - The number of components from each field to incorporate into `subdm`, or PETSC_DECIDE for all components 396 - comps - The component numbers of the selected fields (omitted for PTESC_DECIDE fields) 397 398 Output Parameters: 399 + is - The global indices for the subproblem or `NULL` 400 - subdm - The `DM` for the subproblem, which must already have be cloned from `dm` or `NULL` 401 402 Level: intermediate 403 404 Notes: 405 If `is` and `subdm` are both `NULL` this does nothing 406 407 .seealso: `DMCreateSubDM()`, `DMGetLocalSection()`, `DMPlexSetMigrationSF()`, `DMView()` 408 @*/ 409 PetscErrorCode DMCreateSectionSubDM(DM dm, PetscInt numFields, const PetscInt fields[], const PetscInt numComps[], const PetscInt comps[], IS *is, DM *subdm) 410 { 411 PetscSection section, sectionGlobal; 412 PetscInt Nf; 413 414 PetscFunctionBegin; 415 if (!numFields) PetscFunctionReturn(PETSC_SUCCESS); 416 PetscCall(DMGetLocalSection(dm, §ion)); 417 PetscCall(DMGetGlobalSection(dm, §ionGlobal)); 418 PetscCheck(section, PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Must set default section for DM before splitting fields"); 419 PetscCheck(sectionGlobal, PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Must set default global section for DM before splitting fields"); 420 PetscCall(PetscSectionGetNumFields(section, &Nf)); 421 PetscCheck(numFields <= Nf, PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Number of requested fields %" PetscInt_FMT " greater than number of DM fields %" PetscInt_FMT, numFields, Nf); 422 423 if (is) PetscCall(PetscSectionSelectFields_Private(section, sectionGlobal, numFields, fields, numComps, comps, is)); 424 if (subdm) PetscCall(DMSelectFields_Private(dm, section, numFields, fields, numComps, comps, is, subdm)); 425 PetscFunctionReturn(PETSC_SUCCESS); 426 } 427 428 /*@C 429 DMCreateSectionSuperDM - Returns an arrays of `IS` and a `DM` containing a `PetscSection` that encapsulates a superproblem defined by the array of `DM` and their `PetscSection` 430 431 Not Collective 432 433 Input Parameters: 434 + dms - The `DM` objects, the must all have the same topology; for example obtained with `DMClone()` 435 - len - The number of `DM` in `dms` 436 437 Output Parameters: 438 + is - The global indices for the subproblem, or `NULL` 439 - superdm - The `DM` for the superproblem, which must already have be cloned and contain the same topology as the `dms` 440 441 Level: intermediate 442 443 .seealso: `DMCreateSuperDM()`, `DMGetLocalSection()`, `DMPlexSetMigrationSF()`, `DMView()` 444 @*/ 445 PetscErrorCode DMCreateSectionSuperDM(DM dms[], PetscInt len, IS *is[], DM *superdm) 446 { 447 MPI_Comm comm; 448 PetscSection supersection, *sections, *sectionGlobals; 449 PetscInt *Nfs, Nf = 0, f, supf, oldf = -1, nullf = -1, i; 450 PetscBool haveNull = PETSC_FALSE; 451 452 PetscFunctionBegin; 453 PetscCall(PetscObjectGetComm((PetscObject)dms[0], &comm)); 454 /* Pull out local and global sections */ 455 PetscCall(PetscMalloc3(len, &Nfs, len, §ions, len, §ionGlobals)); 456 for (i = 0; i < len; ++i) { 457 PetscCall(DMGetLocalSection(dms[i], §ions[i])); 458 PetscCall(DMGetGlobalSection(dms[i], §ionGlobals[i])); 459 PetscCheck(sections[i], comm, PETSC_ERR_ARG_WRONG, "Must set default section for DM before splitting fields"); 460 PetscCheck(sectionGlobals[i], comm, PETSC_ERR_ARG_WRONG, "Must set default global section for DM before splitting fields"); 461 PetscCall(PetscSectionGetNumFields(sections[i], &Nfs[i])); 462 Nf += Nfs[i]; 463 } 464 /* Create the supersection */ 465 PetscCall(PetscSectionCreateSupersection(sections, len, &supersection)); 466 PetscCall(DMSetLocalSection(*superdm, supersection)); 467 /* Create ISes */ 468 if (is) { 469 PetscSection supersectionGlobal; 470 PetscInt bs = -1, startf = 0; 471 472 PetscCall(PetscMalloc1(len, is)); 473 PetscCall(DMGetGlobalSection(*superdm, &supersectionGlobal)); 474 for (i = 0; i < len; startf += Nfs[i], ++i) { 475 PetscInt *subIndices; 476 PetscInt subSize, subOff, pStart, pEnd, p, start, end, dummy; 477 478 PetscCall(PetscSectionGetChart(sectionGlobals[i], &pStart, &pEnd)); 479 PetscCall(PetscSectionGetConstrainedStorageSize(sectionGlobals[i], &subSize)); 480 PetscCall(PetscMalloc1(subSize, &subIndices)); 481 for (p = pStart, subOff = 0; p < pEnd; ++p) { 482 PetscInt gdof, gcdof, gtdof, d; 483 484 PetscCall(PetscSectionGetDof(sectionGlobals[i], p, &gdof)); 485 PetscCall(PetscSectionGetConstraintDof(sections[i], p, &gcdof)); 486 gtdof = gdof - gcdof; 487 if (gdof > 0 && gtdof) { 488 if (bs < 0) { 489 bs = gtdof; 490 } else if (bs != gtdof) { 491 bs = 1; 492 } 493 PetscCall(DMGetGlobalFieldOffset_Private(*superdm, p, startf, &start, &dummy)); 494 PetscCall(DMGetGlobalFieldOffset_Private(*superdm, p, startf + Nfs[i] - 1, &dummy, &end)); 495 PetscCheck(end - start == gtdof, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Invalid number of global dofs %" PetscInt_FMT " != %" PetscInt_FMT " for dm %" PetscInt_FMT " on point %" PetscInt_FMT, end - start, gtdof, i, p); 496 for (d = start; d < end; ++d, ++subOff) subIndices[subOff] = d; 497 } 498 } 499 PetscCall(ISCreateGeneral(comm, subSize, subIndices, PETSC_OWN_POINTER, &(*is)[i])); 500 /* Must have same blocksize on all procs (some might have no points) */ 501 { 502 PetscInt bs = -1, bsLocal[2], bsMinMax[2]; 503 504 bsLocal[0] = bs < 0 ? PETSC_INT_MAX : bs; 505 bsLocal[1] = bs; 506 PetscCall(PetscGlobalMinMaxInt(comm, bsLocal, bsMinMax)); 507 if (bsMinMax[0] != bsMinMax[1]) { 508 bs = 1; 509 } else { 510 bs = bsMinMax[0]; 511 } 512 PetscCall(ISSetBlockSize((*is)[i], bs)); 513 } 514 } 515 } 516 /* Preserve discretizations */ 517 if (len && dms[0]->probs) { 518 PetscCall(DMSetNumFields(*superdm, Nf)); 519 for (i = 0, supf = 0; i < len; ++i) { 520 for (f = 0; f < Nfs[i]; ++f, ++supf) { 521 PetscObject disc; 522 523 PetscCall(DMGetField(dms[i], f, NULL, &disc)); 524 PetscCall(DMSetField(*superdm, supf, NULL, disc)); 525 } 526 } 527 PetscCall(DMCreateDS(*superdm)); 528 } 529 /* Preserve nullspaces */ 530 for (i = 0, supf = 0; i < len; ++i) { 531 for (f = 0; f < Nfs[i]; ++f, ++supf) { 532 (*superdm)->nullspaceConstructors[supf] = dms[i]->nullspaceConstructors[f]; 533 if ((*superdm)->nullspaceConstructors[supf]) { 534 haveNull = PETSC_TRUE; 535 nullf = supf; 536 oldf = f; 537 } 538 } 539 } 540 /* Attach nullspace to IS */ 541 if (haveNull && is) { 542 MatNullSpace nullSpace; 543 544 PetscCall((*(*superdm)->nullspaceConstructors[nullf])(*superdm, oldf, nullf, &nullSpace)); 545 PetscCall(PetscObjectCompose((PetscObject)(*is)[nullf], "nullspace", (PetscObject)nullSpace)); 546 PetscCall(MatNullSpaceDestroy(&nullSpace)); 547 } 548 PetscCall(PetscSectionDestroy(&supersection)); 549 PetscCall(PetscFree3(Nfs, sections, sectionGlobals)); 550 PetscFunctionReturn(PETSC_SUCCESS); 551 } 552