xref: /petsc/src/ksp/pc/impls/bddc/bddc.c (revision e569e4e1ca4d58babea6c7df0d5cfa10eaacd027)
153cdbc3dSStefano Zampini /* TODOLIST
2eb97c9d2SStefano Zampini 
3eb97c9d2SStefano Zampini    Solvers
4a0d3c3abSStefano Zampini    - Add support for cholesky for coarse solver (similar to local solvers)
5eb97c9d2SStefano Zampini    - Propagate ksp prefixes for solvers to mat objects?
6eb97c9d2SStefano Zampini 
7eb97c9d2SStefano Zampini    User interface
80f202f7eSStefano Zampini    - ** DM attached to pc?
9eb97c9d2SStefano Zampini 
10eb97c9d2SStefano Zampini    Debugging output
11b9b85e73SStefano Zampini    - * Better management of verbosity levels of debugging output
12eb97c9d2SStefano Zampini 
13eb97c9d2SStefano Zampini    Extra
14b9b85e73SStefano Zampini    - *** Is it possible to work with PCBDDCGraph on boundary indices only (less memory consumed)?
15eb97c9d2SStefano Zampini    - BDDC with MG framework?
16eb97c9d2SStefano Zampini 
17eb97c9d2SStefano Zampini    MATIS related operations contained in BDDC code
18eb97c9d2SStefano Zampini    - Provide general case for subassembling
19eb97c9d2SStefano Zampini 
2053cdbc3dSStefano Zampini */
210c7d97c5SJed Brown 
22ab5c6b0cSJed Brown #include <../src/ksp/pc/impls/bddc/bddc.h> /*I "petscpc.h" I*/  /* includes for fortran wrappers */
23ab5c6b0cSJed Brown #include <../src/ksp/pc/impls/bddc/bddcprivate.h>
243b03a366Sstefano_zampini #include <petscblaslapack.h>
25674ae819SStefano Zampini 
2643371fb9SStefano Zampini static PetscBool PCBDDCPackageInitialized = PETSC_FALSE;
2743371fb9SStefano Zampini 
28f3d41395Sstefano_zampini static PetscBool  cited = PETSC_FALSE;
29f3d41395Sstefano_zampini static const char citation[] =
30f3d41395Sstefano_zampini "@article{ZampiniPCBDDC,\n"
31f3d41395Sstefano_zampini "author = {Stefano Zampini},\n"
32f3d41395Sstefano_zampini "title = {{PCBDDC}: A Class of Robust Dual-Primal Methods in {PETS}c},\n"
33f3d41395Sstefano_zampini "journal = {SIAM Journal on Scientific Computing},\n"
34f3d41395Sstefano_zampini "volume = {38},\n"
35f3d41395Sstefano_zampini "number = {5},\n"
36f3d41395Sstefano_zampini "pages = {S282-S306},\n"
37f3d41395Sstefano_zampini "year = {2016},\n"
38f3d41395Sstefano_zampini "doi = {10.1137/15M1025785},\n"
39f3d41395Sstefano_zampini "URL = {http://dx.doi.org/10.1137/15M1025785},\n"
40f3d41395Sstefano_zampini "eprint = {http://dx.doi.org/10.1137/15M1025785}\n"
41f3d41395Sstefano_zampini "}\n";
42f3d41395Sstefano_zampini 
4343371fb9SStefano Zampini PetscLogEvent PC_BDDC_Topology[PETSC_PCBDDC_MAXLEVELS];
4443371fb9SStefano Zampini PetscLogEvent PC_BDDC_LocalSolvers[PETSC_PCBDDC_MAXLEVELS];
4543371fb9SStefano Zampini PetscLogEvent PC_BDDC_LocalWork[PETSC_PCBDDC_MAXLEVELS];
4643371fb9SStefano Zampini PetscLogEvent PC_BDDC_CorrectionSetUp[PETSC_PCBDDC_MAXLEVELS];
4743371fb9SStefano Zampini PetscLogEvent PC_BDDC_CoarseSetUp[PETSC_PCBDDC_MAXLEVELS];
4843371fb9SStefano Zampini PetscLogEvent PC_BDDC_CoarseSolver[PETSC_PCBDDC_MAXLEVELS];
4943371fb9SStefano Zampini PetscLogEvent PC_BDDC_AdaptiveSetUp[PETSC_PCBDDC_MAXLEVELS];
5043371fb9SStefano Zampini PetscLogEvent PC_BDDC_Scaling[PETSC_PCBDDC_MAXLEVELS];
5143371fb9SStefano Zampini PetscLogEvent PC_BDDC_Schurs[PETSC_PCBDDC_MAXLEVELS];
5243371fb9SStefano Zampini 
530369aaf7SStefano Zampini PetscErrorCode PCApply_BDDC(PC,Vec,Vec);
540369aaf7SStefano Zampini 
554416b707SBarry Smith PetscErrorCode PCSetFromOptions_BDDC(PetscOptionItems *PetscOptionsObject,PC pc)
560c7d97c5SJed Brown {
570c7d97c5SJed Brown   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
58*e569e4e1SStefano Zampini   PetscInt       nt,i;
590c7d97c5SJed Brown   PetscErrorCode ierr;
600c7d97c5SJed Brown 
610c7d97c5SJed Brown   PetscFunctionBegin;
62e55864a3SBarry Smith   ierr = PetscOptionsHead(PetscOptionsObject,"BDDC options");CHKERRQ(ierr);
638eeda7d8SStefano Zampini   /* Verbose debugging */
64a13144ffSStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_check_level","Verbose output for PCBDDC (intended for debug)","none",pcbddc->dbg_flag,&pcbddc->dbg_flag,NULL);CHKERRQ(ierr);
65a13144ffSStefano Zampini   /* Approximate solvers */
66c7017625SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_dirichlet_approximate","Inform PCBDDC that we are using approximate Dirichlet solvers","none",pcbddc->NullSpace_corr[0],&pcbddc->NullSpace_corr[0],NULL);CHKERRQ(ierr);
67c7017625SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_dirichlet_approximate_scale","Inform PCBDDC that we need to scale the Dirichlet solve","none",pcbddc->NullSpace_corr[1],&pcbddc->NullSpace_corr[1],NULL);CHKERRQ(ierr);
68c7017625SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_neumann_approximate","Inform PCBDDC that we are using approximate Neumann solvers","none",pcbddc->NullSpace_corr[2],&pcbddc->NullSpace_corr[2],NULL);CHKERRQ(ierr);
69c7017625SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_neumann_approximate_scale","Inform PCBDDC that we need to scale the Neumann solve","none",pcbddc->NullSpace_corr[3],&pcbddc->NullSpace_corr[3],NULL);CHKERRQ(ierr);
706b78500eSPatrick Sanan   /* Primal space customization */
7108a5cf49SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_local_mat_graph","Use or not adjacency graph of local mat for interface analysis","none",pcbddc->use_local_adj,&pcbddc->use_local_adj,NULL);CHKERRQ(ierr);
72be12c134Sstefano_zampini   ierr = PetscOptionsInt("-pc_bddc_graph_maxcount","Maximum number of shared subdomains for a connected component","none",pcbddc->graphmaxcount,&pcbddc->graphmaxcount,NULL);CHKERRQ(ierr);
731c7a958bSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_corner_selection","Activates face-based corner selection","none",pcbddc->corner_selection,&pcbddc->corner_selection,NULL);CHKERRQ(ierr);
748eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_vertices","Use or not corner dofs in coarse space","none",pcbddc->use_vertices,&pcbddc->use_vertices,NULL);CHKERRQ(ierr);
758eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_edges","Use or not edge constraints in coarse space","none",pcbddc->use_edges,&pcbddc->use_edges,NULL);CHKERRQ(ierr);
768eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_faces","Use or not face constraints in coarse space","none",pcbddc->use_faces,&pcbddc->use_faces,NULL);CHKERRQ(ierr);
7714f95afaSStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_vertex_size","Connected components smaller or equal to vertex size will be considered as primal vertices","none",pcbddc->vertex_size,&pcbddc->vertex_size,NULL);CHKERRQ(ierr);
786661aa1dSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_true_nnsp","Use near null space attached to the matrix without modifications","none",pcbddc->use_nnsp_true,&pcbddc->use_nnsp_true,NULL);CHKERRQ(ierr);
7914f95afaSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_qr_single","Use QR factorization for single constraints on cc (QR is always used when multiple constraints are present)","none",pcbddc->use_qr_single,&pcbddc->use_qr_single,NULL);CHKERRQ(ierr);
808eeda7d8SStefano Zampini   /* Change of basis */
81b9b85e73SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_change_of_basis","Use or not internal change of basis on local edge nodes","none",pcbddc->use_change_of_basis,&pcbddc->use_change_of_basis,NULL);CHKERRQ(ierr);
82b9b85e73SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_change_on_faces","Use or not internal change of basis on local face nodes","none",pcbddc->use_change_on_faces,&pcbddc->use_change_on_faces,NULL);CHKERRQ(ierr);
83674ae819SStefano Zampini   if (!pcbddc->use_change_of_basis) {
84674ae819SStefano Zampini     pcbddc->use_change_on_faces = PETSC_FALSE;
85674ae819SStefano Zampini   }
868eeda7d8SStefano Zampini   /* Switch between M_2 (default) and M_3 preconditioners (as defined by C. Dohrmann in the ref. article) */
878eeda7d8SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_switch_static","Switch on static condensation ops around the interface preconditioner","none",pcbddc->switch_static,&pcbddc->switch_static,NULL);CHKERRQ(ierr);
88*e569e4e1SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_coarse_eqs_per_proc","Target number of equations per process for coarse problem redistribution (significant only at the coarsest level)","none",pcbddc->coarse_eqs_per_proc,&pcbddc->coarse_eqs_per_proc,NULL);CHKERRQ(ierr);
89*e569e4e1SStefano Zampini   i    = pcbddc->coarsening_ratio;
90*e569e4e1SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_coarsening_ratio","Set coarsening ratio used in multilevel coarsening","PCBDDCSetCoarseningRatio",i,&i,NULL);CHKERRQ(ierr);
91*e569e4e1SStefano Zampini   ierr = PCBDDCSetCoarseningRatio(pc,i);CHKERRQ(ierr);
92*e569e4e1SStefano Zampini   i    = pcbddc->max_levels;
93*e569e4e1SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_levels","Set maximum number of levels for multilevel","PCBDDCSetLevels",i,&i,NULL);CHKERRQ(ierr);
94*e569e4e1SStefano Zampini   ierr = PCBDDCSetLevels(pc,i);CHKERRQ(ierr);
95*e569e4e1SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_coarse_eqs_limit","Set maximum number of equations on coarsest grid to aim for","none",pcbddc->coarse_eqs_limit,&pcbddc->coarse_eqs_limit,NULL);CHKERRQ(ierr);
96323d395dSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_coarse_estimates","Use estimated eigenvalues for coarse problem","none",pcbddc->use_coarse_estimates,&pcbddc->use_coarse_estimates,NULL);CHKERRQ(ierr);
97674ae819SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_use_deluxe_scaling","Use deluxe scaling for BDDC","none",pcbddc->use_deluxe_scaling,&pcbddc->use_deluxe_scaling,NULL);CHKERRQ(ierr);
98b96c3477SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_schur_rebuild","Whether or not the interface graph for Schur principal minors has to be rebuilt (i.e. define the interface without any adjacency)","none",pcbddc->sub_schurs_rebuild,&pcbddc->sub_schurs_rebuild,NULL);CHKERRQ(ierr);
99b96c3477SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_schur_layers","Number of dofs' layers for the computation of principal minors (i.e. -1 uses all dofs)","none",pcbddc->sub_schurs_layers,&pcbddc->sub_schurs_layers,NULL);CHKERRQ(ierr);
100b96c3477SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_schur_use_useradj","Whether or not the CSR graph specified by the user should be used for computing successive layers (default is to use adj of local mat)","none",pcbddc->sub_schurs_use_useradj,&pcbddc->sub_schurs_use_useradj,NULL);CHKERRQ(ierr);
101683d3df6SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_schur_exact","Whether or not to use the exact Schur complement instead of the reduced one (which excludes size 1 cc)","none",pcbddc->sub_schurs_exact_schur,&pcbddc->sub_schurs_exact_schur,NULL);CHKERRQ(ierr);
102bf3a8328SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_deluxe_zerorows","Zero rows and columns of deluxe operators associated with primal dofs","none",pcbddc->deluxe_zerorows,&pcbddc->deluxe_zerorows,NULL);CHKERRQ(ierr);
103839e9adbSstefano_zampini   ierr = PetscOptionsBool("-pc_bddc_deluxe_singlemat","Collapse deluxe operators","none",pcbddc->deluxe_singlemat,&pcbddc->deluxe_singlemat,NULL);CHKERRQ(ierr);
104bf3a8328SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_adaptive_userdefined","Use user-defined constraints (should be attached via MatSetNearNullSpace to pmat) in addition to those adaptively generated","none",pcbddc->adaptive_userdefined,&pcbddc->adaptive_userdefined,NULL);CHKERRQ(ierr);
105bd2a564bSStefano Zampini   nt   = 2;
106bd2a564bSStefano Zampini   ierr = PetscOptionsRealArray("-pc_bddc_adaptive_threshold","Thresholds to be used for adaptive selection of constraints","none",pcbddc->adaptive_threshold,&nt,NULL);CHKERRQ(ierr);
107bd2a564bSStefano Zampini   if (nt == 1) pcbddc->adaptive_threshold[1] = pcbddc->adaptive_threshold[0];
10808122e43SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_adaptive_nmin","Minimum number of constraints per connected components","none",pcbddc->adaptive_nmin,&pcbddc->adaptive_nmin,NULL);CHKERRQ(ierr);
10908122e43SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_adaptive_nmax","Maximum number of constraints per connected components","none",pcbddc->adaptive_nmax,&pcbddc->adaptive_nmax,NULL);CHKERRQ(ierr);
1103301b35fSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_symmetric","Symmetric computation of primal basis functions","none",pcbddc->symmetric_primal,&pcbddc->symmetric_primal,NULL);CHKERRQ(ierr);
111b0c7d250SStefano Zampini   ierr = PetscOptionsInt("-pc_bddc_coarse_adj","Number of processors where to map the coarse adjacency list","none",pcbddc->coarse_adj_red,&pcbddc->coarse_adj_red,NULL);CHKERRQ(ierr);
112b3afcdbeSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_benign_trick","Apply the benign subspace trick to saddle point problems with discontinuous pressures","none",pcbddc->benign_saddle_point,&pcbddc->benign_saddle_point,NULL);CHKERRQ(ierr);
113e9627c49SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_benign_change","Compute the pressure change of basis explicitly","none",pcbddc->benign_change_explicit,&pcbddc->benign_change_explicit,NULL);CHKERRQ(ierr);
11427b6a85dSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_benign_compute_correction","Compute the benign correction during PreSolve","none",pcbddc->benign_compute_correction,&pcbddc->benign_compute_correction,NULL);CHKERRQ(ierr);
115a198735bSStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_nonetflux","Automatic computation of no-net-flux quadrature weights","none",pcbddc->compute_nonetflux,&pcbddc->compute_nonetflux,NULL);CHKERRQ(ierr);
1164f1b2e48SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_detect_disconnected","Detects disconnected subdomains","none",pcbddc->detect_disconnected,&pcbddc->detect_disconnected,NULL);CHKERRQ(ierr);
1178361f951SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_detect_disconnected_filter","Filters out small entries in the local matrix when detecting disconnected subdomains","none",pcbddc->detect_disconnected_filter,&pcbddc->detect_disconnected_filter,NULL);CHKERRQ(ierr);
11870c64980SStefano Zampini   ierr = PetscOptionsBool("-pc_bddc_eliminate_dirichlet","Whether or not we want to eliminate dirichlet dofs during presolve","none",pcbddc->eliminate_dirdofs,&pcbddc->eliminate_dirdofs,NULL);CHKERRQ(ierr);
1190c7d97c5SJed Brown   ierr = PetscOptionsTail();CHKERRQ(ierr);
1200c7d97c5SJed Brown   PetscFunctionReturn(0);
1210c7d97c5SJed Brown }
1226b78500eSPatrick Sanan 
1236b78500eSPatrick Sanan static PetscErrorCode PCView_BDDC(PC pc,PetscViewer viewer)
1246b78500eSPatrick Sanan {
1256b78500eSPatrick Sanan   PC_BDDC              *pcbddc = (PC_BDDC*)pc->data;
126e9627c49SStefano Zampini   PC_IS                *pcis = (PC_IS*)pc->data;
1276b78500eSPatrick Sanan   PetscErrorCode       ierr;
12871783a16SStefano Zampini   PetscBool            isascii;
129e9627c49SStefano Zampini   PetscSubcomm         subcomm;
130e9627c49SStefano Zampini   PetscViewer          subviewer;
1316b78500eSPatrick Sanan 
1326b78500eSPatrick Sanan   PetscFunctionBegin;
1336b78500eSPatrick Sanan   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&isascii);CHKERRQ(ierr);
1346b78500eSPatrick Sanan   /* ASCII viewer */
1356b78500eSPatrick Sanan   if (isascii) {
1364b2aedd3SStefano Zampini     PetscMPIInt   color,rank,size;
137fbad9177SStefano Zampini     PetscInt64    loc[7],gsum[6],gmax[6],gmin[6],totbenign;
138e9627c49SStefano Zampini     PetscScalar   interface_size;
139e9627c49SStefano Zampini     PetscReal     ratio1=0.,ratio2=0.;
140e9627c49SStefano Zampini     Vec           counter;
1416b78500eSPatrick Sanan 
142b74ba07aSstefano_zampini     if (!pc->setupcalled) {
143b74ba07aSstefano_zampini       ierr = PetscViewerASCIIPrintf(viewer,"  Partial information available: preconditioner has not been setup yet\n");CHKERRQ(ierr);
144b74ba07aSstefano_zampini     }
145efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Use verbose output: %D\n",pcbddc->dbg_flag);CHKERRQ(ierr);
1466f0c0a6aSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Use user-defined CSR: %d\n",!!pcbddc->mat_graph->nvtxs_csr);CHKERRQ(ierr);
1476f0c0a6aSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Use local mat graph: %d\n",pcbddc->use_local_adj && !pcbddc->mat_graph->nvtxs_csr);CHKERRQ(ierr);
148e9627c49SStefano Zampini     if (pcbddc->mat_graph->twodim) {
149efd4aadfSBarry Smith       ierr = PetscViewerASCIIPrintf(viewer,"  Connectivity graph topological dimension: 2\n");CHKERRQ(ierr);
150e9627c49SStefano Zampini     } else {
151efd4aadfSBarry Smith       ierr = PetscViewerASCIIPrintf(viewer,"  Connectivity graph topological dimension: 3\n");CHKERRQ(ierr);
152e9627c49SStefano Zampini     }
153aefa1729SStefano Zampini     if (pcbddc->graphmaxcount != PETSC_MAX_INT) {
154efd4aadfSBarry Smith       ierr = PetscViewerASCIIPrintf(viewer,"  Graph max count: %D\n",pcbddc->graphmaxcount);CHKERRQ(ierr);
155aefa1729SStefano Zampini     }
15650e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Use vertices: %d (vertex size %D)\n",pcbddc->use_vertices,pcbddc->vertex_size);CHKERRQ(ierr);
157efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Use edges: %d\n",pcbddc->use_edges);CHKERRQ(ierr);
158efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Use faces: %d\n",pcbddc->use_faces);CHKERRQ(ierr);
159efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Use true near null space: %d\n",pcbddc->use_nnsp_true);CHKERRQ(ierr);
160efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Use QR for single constraints on cc: %d\n",pcbddc->use_qr_single);CHKERRQ(ierr);
161efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Use change of basis on local edge nodes: %d\n",pcbddc->use_change_of_basis);CHKERRQ(ierr);
162efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Use change of basis on local face nodes: %d\n",pcbddc->use_change_on_faces);CHKERRQ(ierr);
163efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  User defined change of basis matrix: %d\n",!!pcbddc->user_ChangeOfBasisMatrix);CHKERRQ(ierr);
164efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Has change of basis matrix: %d\n",!!pcbddc->ChangeOfBasisMatrix);CHKERRQ(ierr);
165efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Eliminate dirichlet boundary dofs: %d\n",pcbddc->eliminate_dirdofs);CHKERRQ(ierr);
166efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Switch on static condensation ops around the interface preconditioner: %d\n",pcbddc->switch_static);CHKERRQ(ierr);
167efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Use exact dirichlet trick: %d\n",pcbddc->use_exact_dirichlet_trick);CHKERRQ(ierr);
16850e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Multilevel max levels: %D\n",pcbddc->max_levels);CHKERRQ(ierr);
16950e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Multilevel coarsening ratio: %D\n",pcbddc->coarsening_ratio);CHKERRQ(ierr);
170efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Use estimated eigs for coarse problem: %d\n",pcbddc->use_coarse_estimates);CHKERRQ(ierr);
171efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Use deluxe scaling: %d\n",pcbddc->use_deluxe_scaling);CHKERRQ(ierr);
172efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Use deluxe zerorows: %d\n",pcbddc->deluxe_zerorows);CHKERRQ(ierr);
173efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Use deluxe singlemat: %d\n",pcbddc->deluxe_singlemat);CHKERRQ(ierr);
174efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Rebuild interface graph for Schur principal minors: %d\n",pcbddc->sub_schurs_rebuild);CHKERRQ(ierr);
17550e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Number of dofs' layers for the computation of principal minors: %D\n",pcbddc->sub_schurs_layers);CHKERRQ(ierr);
176efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Use user CSR graph to compute successive layers: %d\n",pcbddc->sub_schurs_use_useradj);CHKERRQ(ierr);
177bd2a564bSStefano Zampini     if (pcbddc->adaptive_threshold[1] != pcbddc->adaptive_threshold[0]) {
178bd2a564bSStefano Zampini       ierr = PetscViewerASCIIPrintf(viewer,"  Adaptive constraint selection thresholds (active %d, userdefined %d): %g,%g\n",pcbddc->adaptive_selection,pcbddc->adaptive_userdefined,pcbddc->adaptive_threshold[0],pcbddc->adaptive_threshold[1]);CHKERRQ(ierr);
179bd2a564bSStefano Zampini     } else {
180bd2a564bSStefano Zampini       ierr = PetscViewerASCIIPrintf(viewer,"  Adaptive constraint selection threshold (active %d, userdefined %d): %g\n",pcbddc->adaptive_selection,pcbddc->adaptive_userdefined,pcbddc->adaptive_threshold[0]);CHKERRQ(ierr);
181bd2a564bSStefano Zampini     }
18250e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Min constraints / connected component: %D\n",pcbddc->adaptive_nmin);CHKERRQ(ierr);
18350e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Max constraints / connected component: %D\n",pcbddc->adaptive_nmax);CHKERRQ(ierr);
184efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Invert exact Schur complement for adaptive selection: %d\n",pcbddc->sub_schurs_exact_schur);CHKERRQ(ierr);
185efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Symmetric computation of primal basis functions: %d\n",pcbddc->symmetric_primal);CHKERRQ(ierr);
18650e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Num. Procs. to map coarse adjacency list: %D\n",pcbddc->coarse_adj_red);CHKERRQ(ierr);
18750e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Coarse eqs per proc (significant at the coarsest level): %D\n",pcbddc->coarse_eqs_per_proc);CHKERRQ(ierr);
1888361f951SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Detect disconnected: %d (filter %d)\n",pcbddc->detect_disconnected,pcbddc->detect_disconnected_filter);CHKERRQ(ierr);
189efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Benign subspace trick: %d (change explicit %d)\n",pcbddc->benign_saddle_point,pcbddc->benign_change_explicit);CHKERRQ(ierr);
190efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"  Benign subspace trick is active: %d\n",pcbddc->benign_have_null);CHKERRQ(ierr);
19115579a77SStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Algebraic computation of no-net-flux: %d\n",pcbddc->compute_nonetflux);CHKERRQ(ierr);
192b74ba07aSstefano_zampini     if (!pc->setupcalled) PetscFunctionReturn(0);
1936b78500eSPatrick Sanan 
194fbad9177SStefano Zampini     /* compute interface size */
195e9627c49SStefano Zampini     ierr = VecSet(pcis->vec1_B,1.0);CHKERRQ(ierr);
196e9627c49SStefano Zampini     ierr = MatCreateVecs(pc->pmat,&counter,0);CHKERRQ(ierr);
197e9627c49SStefano Zampini     ierr = VecSet(counter,0.0);CHKERRQ(ierr);
198e9627c49SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,counter,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
199e9627c49SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_B,pcis->vec1_B,counter,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
200e9627c49SStefano Zampini     ierr = VecSum(counter,&interface_size);CHKERRQ(ierr);
201e9627c49SStefano Zampini     ierr = VecDestroy(&counter);CHKERRQ(ierr);
202fbad9177SStefano Zampini 
203fbad9177SStefano Zampini     /* compute some statistics on the domain decomposition */
204e9627c49SStefano Zampini     gsum[0] = 1;
205fbad9177SStefano Zampini     gsum[1] = gsum[2] = gsum[3] = gsum[4] = gsum[5] = 0;
206e9627c49SStefano Zampini     loc[0]  = !!pcis->n;
207e9627c49SStefano Zampini     loc[1]  = pcis->n - pcis->n_B;
208e9627c49SStefano Zampini     loc[2]  = pcis->n_B;
209e9627c49SStefano Zampini     loc[3]  = pcbddc->local_primal_size;
210345ecf6cSStefano Zampini     loc[4]  = pcis->n;
211fbad9177SStefano Zampini     loc[5]  = pcbddc->n_local_subs > 0 ? pcbddc->n_local_subs : (pcis->n ? 1 : 0);
212fbad9177SStefano Zampini     loc[6]  = pcbddc->benign_n;
213fbad9177SStefano Zampini     ierr = MPI_Reduce(loc,gsum,6,MPIU_INT64,MPI_SUM,0,PetscObjectComm((PetscObject)pc));CHKERRQ(ierr);
214fbad9177SStefano Zampini     if (!loc[0]) loc[1] = loc[2] = loc[3] = loc[4] = loc[5] = -1;
215fbad9177SStefano Zampini     ierr = MPI_Reduce(loc,gmax,6,MPIU_INT64,MPI_MAX,0,PetscObjectComm((PetscObject)pc));CHKERRQ(ierr);
216fbad9177SStefano Zampini     if (!loc[0]) loc[1] = loc[2] = loc[3] = loc[4] = loc[5] = PETSC_MAX_INT;
217fbad9177SStefano Zampini     ierr = MPI_Reduce(loc,gmin,6,MPIU_INT64,MPI_MIN,0,PetscObjectComm((PetscObject)pc));CHKERRQ(ierr);
218fbad9177SStefano Zampini     ierr = MPI_Reduce(&loc[6],&totbenign,1,MPIU_INT64,MPI_SUM,0,PetscObjectComm((PetscObject)pc));CHKERRQ(ierr);
219e9627c49SStefano Zampini     if (pcbddc->coarse_size) {
220e9627c49SStefano Zampini       ratio1 = pc->pmat->rmap->N/(1.*pcbddc->coarse_size);
221e9627c49SStefano Zampini       ratio2 = PetscRealPart(interface_size)/pcbddc->coarse_size;
222e9627c49SStefano Zampini     }
223efd4aadfSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"********************************** STATISTICS AT LEVEL %d **********************************\n",pcbddc->current_level);CHKERRQ(ierr);
22450e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Global dofs sizes: all %D interface %D coarse %D\n",pc->pmat->rmap->N,(PetscInt)PetscRealPart(interface_size),pcbddc->coarse_size);CHKERRQ(ierr);
22550e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Coarsening ratios: all/coarse %D interface/coarse %D\n",(PetscInt)ratio1,(PetscInt)ratio2);CHKERRQ(ierr);
22650e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Active processes : %D\n",(PetscInt)gsum[0]);CHKERRQ(ierr);
22750e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Total subdomains : %D\n",(PetscInt)gsum[5]);CHKERRQ(ierr);
228345ecf6cSStefano Zampini     if (pcbddc->benign_have_null) {
22950e0721cSStefano Zampini       ierr = PetscViewerASCIIPrintf(viewer,"  Benign subs      : %D\n",(PetscInt)totbenign);CHKERRQ(ierr);
230345ecf6cSStefano Zampini     }
23150e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Dofs type        :\tMIN\tMAX\tMEAN\n");CHKERRQ(ierr);
23250e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Interior  dofs   :\t%D\t%D\t%D\n",(PetscInt)gmin[1],(PetscInt)gmax[1],(PetscInt)(gsum[1]/gsum[0]));CHKERRQ(ierr);
23350e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Interface dofs   :\t%D\t%D\t%D\n",(PetscInt)gmin[2],(PetscInt)gmax[2],(PetscInt)(gsum[2]/gsum[0]));CHKERRQ(ierr);
23450e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Primal    dofs   :\t%D\t%D\t%D\n",(PetscInt)gmin[3],(PetscInt)gmax[3],(PetscInt)(gsum[3]/gsum[0]));CHKERRQ(ierr);
23550e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Local     dofs   :\t%D\t%D\t%D\n",(PetscInt)gmin[4],(PetscInt)gmax[4],(PetscInt)(gsum[4]/gsum[0]));CHKERRQ(ierr);
23650e0721cSStefano Zampini     ierr = PetscViewerASCIIPrintf(viewer,"  Local     subs   :\t%D\t%D\n"    ,(PetscInt)gmin[5],(PetscInt)gmax[5]);CHKERRQ(ierr);
23715579a77SStefano Zampini     ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
23815579a77SStefano Zampini 
23915579a77SStefano Zampini     ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)pc),&rank);CHKERRQ(ierr);
24015579a77SStefano Zampini 
24115579a77SStefano Zampini     /* local solvers */
24215579a77SStefano Zampini     ierr = PetscViewerGetSubViewer(viewer,PetscObjectComm((PetscObject)pcbddc->ksp_D),&subviewer);CHKERRQ(ierr);
24315579a77SStefano Zampini     if (!rank) {
24415579a77SStefano Zampini       ierr = PetscViewerASCIIPrintf(subviewer,"--- Interior solver (rank 0)\n");CHKERRQ(ierr);
24515579a77SStefano Zampini       ierr = PetscViewerASCIIPushTab(subviewer);CHKERRQ(ierr);
24615579a77SStefano Zampini       ierr = KSPView(pcbddc->ksp_D,subviewer);CHKERRQ(ierr);
24715579a77SStefano Zampini       ierr = PetscViewerASCIIPopTab(subviewer);CHKERRQ(ierr);
24815579a77SStefano Zampini       ierr = PetscViewerASCIIPrintf(subviewer,"--- Correction solver (rank 0)\n");CHKERRQ(ierr);
24915579a77SStefano Zampini       ierr = PetscViewerASCIIPushTab(subviewer);CHKERRQ(ierr);
25015579a77SStefano Zampini       ierr = KSPView(pcbddc->ksp_R,subviewer);CHKERRQ(ierr);
25115579a77SStefano Zampini       ierr = PetscViewerASCIIPopTab(subviewer);CHKERRQ(ierr);
25215579a77SStefano Zampini       ierr = PetscViewerFlush(subviewer);CHKERRQ(ierr);
25315579a77SStefano Zampini     }
25415579a77SStefano Zampini     ierr = PetscViewerRestoreSubViewer(viewer,PetscObjectComm((PetscObject)pcbddc->ksp_D),&subviewer);CHKERRQ(ierr);
25527b6a85dSStefano Zampini     ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
256e9627c49SStefano Zampini 
257fbad9177SStefano Zampini     /* the coarse problem can be handled by a different communicator */
258e9627c49SStefano Zampini     if (pcbddc->coarse_ksp) color = 1;
259e9627c49SStefano Zampini     else color = 0;
2604b2aedd3SStefano Zampini     ierr = MPI_Comm_size(PetscObjectComm((PetscObject)pc),&size);CHKERRQ(ierr);
261e9627c49SStefano Zampini     ierr = PetscSubcommCreate(PetscObjectComm((PetscObject)pc),&subcomm);CHKERRQ(ierr);
2624b2aedd3SStefano Zampini     ierr = PetscSubcommSetNumber(subcomm,PetscMin(size,2));CHKERRQ(ierr);
263e9627c49SStefano Zampini     ierr = PetscSubcommSetTypeGeneral(subcomm,color,rank);CHKERRQ(ierr);
264e9627c49SStefano Zampini     ierr = PetscViewerGetSubViewer(viewer,PetscSubcommChild(subcomm),&subviewer);CHKERRQ(ierr);
265e9627c49SStefano Zampini     if (color == 1) {
26615579a77SStefano Zampini       ierr = PetscViewerASCIIPrintf(subviewer,"--- Coarse solver\n");CHKERRQ(ierr);
26715579a77SStefano Zampini       ierr = PetscViewerASCIIPushTab(subviewer);CHKERRQ(ierr);
268e9627c49SStefano Zampini       ierr = KSPView(pcbddc->coarse_ksp,subviewer);CHKERRQ(ierr);
26915579a77SStefano Zampini       ierr = PetscViewerASCIIPopTab(subviewer);CHKERRQ(ierr);
270e9627c49SStefano Zampini       ierr = PetscViewerFlush(subviewer);CHKERRQ(ierr);
271e9627c49SStefano Zampini     }
272e9627c49SStefano Zampini     ierr = PetscViewerRestoreSubViewer(viewer,PetscSubcommChild(subcomm),&subviewer);CHKERRQ(ierr);
273e9627c49SStefano Zampini     ierr = PetscSubcommDestroy(&subcomm);CHKERRQ(ierr);
274e9627c49SStefano Zampini     ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
275e9627c49SStefano Zampini   }
2766b78500eSPatrick Sanan   PetscFunctionReturn(0);
2776b78500eSPatrick Sanan }
278a13144ffSStefano Zampini 
2791e0482f5SStefano Zampini static PetscErrorCode PCBDDCSetDiscreteGradient_BDDC(PC pc, Mat G, PetscInt order, PetscInt field, PetscBool global, PetscBool conforming)
280a13144ffSStefano Zampini {
281a13144ffSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
282a13144ffSStefano Zampini   PetscErrorCode ierr;
283a13144ffSStefano Zampini 
284a13144ffSStefano Zampini   PetscFunctionBegin;
285a13144ffSStefano Zampini   ierr = PetscObjectReference((PetscObject)G);CHKERRQ(ierr);
286a13144ffSStefano Zampini   ierr = MatDestroy(&pcbddc->discretegradient);CHKERRQ(ierr);
287a13144ffSStefano Zampini   pcbddc->discretegradient = G;
288a13144ffSStefano Zampini   pcbddc->nedorder         = order > 0 ? order : -order;
289495a2a07SStefano Zampini   pcbddc->nedfield         = field;
2901e0482f5SStefano Zampini   pcbddc->nedglobal        = global;
2911e0482f5SStefano Zampini   pcbddc->conforming       = conforming;
292a13144ffSStefano Zampini   PetscFunctionReturn(0);
293a13144ffSStefano Zampini }
294a13144ffSStefano Zampini 
295a13144ffSStefano Zampini /*@
296a13144ffSStefano Zampini  PCBDDCSetDiscreteGradient - Sets the discrete gradient
297a13144ffSStefano Zampini 
298a13144ffSStefano Zampini    Collective on PC
299a13144ffSStefano Zampini 
300a13144ffSStefano Zampini    Input Parameters:
301a13144ffSStefano Zampini +  pc         - the preconditioning context
302a13144ffSStefano Zampini .  G          - the discrete gradient matrix (should be in AIJ format)
303a13144ffSStefano Zampini .  order      - the order of the Nedelec space (1 for the lowest order)
304495a2a07SStefano Zampini .  field      - the field id of the Nedelec dofs (not used if the fields have not been specified)
3051e0482f5SStefano Zampini .  global     - the type of global ordering for the rows of G
306a13144ffSStefano Zampini -  conforming - whether the mesh is conforming or not
307a13144ffSStefano Zampini 
308a13144ffSStefano Zampini    Level: advanced
309a13144ffSStefano Zampini 
31095452b02SPatrick Sanan    Notes:
31195452b02SPatrick Sanan     The discrete gradient matrix G is used to analyze the subdomain edges, and it should not contain any zero entry.
312495a2a07SStefano Zampini           For variable order spaces, the order should be set to zero.
3131e0482f5SStefano Zampini           If global is true, the rows of G should be given in global ordering for the whole dofs;
3141e0482f5SStefano Zampini           if false, the ordering should be global for the Nedelec field.
3151e0482f5SStefano Zampini           In the latter case, it should hold gid[i] < gid[j] iff geid[i] < geid[j], with gid the global orderding for all the dofs
3161e0482f5SStefano Zampini           and geid the one for the Nedelec field.
317a13144ffSStefano Zampini 
318495a2a07SStefano Zampini .seealso: PCBDDC,PCBDDCSetDofsSplitting(),PCBDDCSetDofsSplittingLocal()
319a13144ffSStefano Zampini @*/
3201e0482f5SStefano Zampini PetscErrorCode PCBDDCSetDiscreteGradient(PC pc, Mat G, PetscInt order, PetscInt field, PetscBool global, PetscBool conforming)
321a13144ffSStefano Zampini {
322a13144ffSStefano Zampini   PetscErrorCode ierr;
323a13144ffSStefano Zampini 
324a13144ffSStefano Zampini   PetscFunctionBegin;
325a13144ffSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
326a13144ffSStefano Zampini   PetscValidHeaderSpecific(G,MAT_CLASSID,2);
327a13144ffSStefano Zampini   PetscValidLogicalCollectiveInt(pc,order,3);
3281e0482f5SStefano Zampini   PetscValidLogicalCollectiveInt(pc,field,4);
3291e0482f5SStefano Zampini   PetscValidLogicalCollectiveBool(pc,global,5);
3301e0482f5SStefano Zampini   PetscValidLogicalCollectiveBool(pc,conforming,6);
3311e0482f5SStefano Zampini   PetscCheckSameComm(pc,1,G,2);
3321e0482f5SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDiscreteGradient_C",(PC,Mat,PetscInt,PetscInt,PetscBool,PetscBool),(pc,G,order,field,global,conforming));CHKERRQ(ierr);
333a13144ffSStefano Zampini   PetscFunctionReturn(0);
334a13144ffSStefano Zampini }
335a13144ffSStefano Zampini 
3368ae0ca82SStefano Zampini static PetscErrorCode PCBDDCSetDivergenceMat_BDDC(PC pc, Mat divudotp, PetscBool trans, IS vl2l)
337a198735bSStefano Zampini {
338a198735bSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
339a198735bSStefano Zampini   PetscErrorCode ierr;
3406b78500eSPatrick Sanan 
341a198735bSStefano Zampini   PetscFunctionBegin;
342a198735bSStefano Zampini   ierr = PetscObjectReference((PetscObject)divudotp);CHKERRQ(ierr);
343a198735bSStefano Zampini   ierr = MatDestroy(&pcbddc->divudotp);CHKERRQ(ierr);
344a198735bSStefano Zampini   pcbddc->divudotp = divudotp;
3458ae0ca82SStefano Zampini   pcbddc->divudotp_trans = trans;
346a198735bSStefano Zampini   pcbddc->compute_nonetflux = PETSC_TRUE;
347a198735bSStefano Zampini   if (vl2l) {
348a198735bSStefano Zampini     ierr = PetscObjectReference((PetscObject)vl2l);CHKERRQ(ierr);
349fa23a32eSStefano Zampini     ierr = ISDestroy(&pcbddc->divudotp_vl2l);CHKERRQ(ierr);
350a198735bSStefano Zampini     pcbddc->divudotp_vl2l = vl2l;
351a198735bSStefano Zampini   }
352a198735bSStefano Zampini   PetscFunctionReturn(0);
353a198735bSStefano Zampini }
3543d996552SStefano Zampini 
355a198735bSStefano Zampini /*@
356a198735bSStefano Zampini  PCBDDCSetDivergenceMat - Sets the linear operator representing \int_\Omega \div {\bf u} \cdot p dx
357a198735bSStefano Zampini 
358a198735bSStefano Zampini    Collective on PC
359a198735bSStefano Zampini 
360a198735bSStefano Zampini    Input Parameters:
361a198735bSStefano Zampini +  pc - the preconditioning context
362a198735bSStefano Zampini .  divudotp - the matrix (must be of type MATIS)
3638ae0ca82SStefano Zampini .  trans - if trans if false (resp. true), then pressures are in the test (trial) space and velocities are in the trial (test) space.
36405a3bf82SStefano Zampini -  vl2l - optional index set describing the local (wrt the local matrix in divudotp) to local (wrt the local matrix in the preconditioning matrix) map for the velocities
365a198735bSStefano Zampini 
366a198735bSStefano Zampini    Level: advanced
367a198735bSStefano Zampini 
36895452b02SPatrick Sanan    Notes:
36995452b02SPatrick Sanan     This auxiliary matrix is used to compute quadrature weights representing the net-flux across subdomain boundaries
37005a3bf82SStefano Zampini           If vl2l is NULL, the local ordering for velocities in divudotp should match that of the preconditioning matrix
371a198735bSStefano Zampini 
372a198735bSStefano Zampini .seealso: PCBDDC
373a198735bSStefano Zampini @*/
3748ae0ca82SStefano Zampini PetscErrorCode PCBDDCSetDivergenceMat(PC pc, Mat divudotp, PetscBool trans, IS vl2l)
375a198735bSStefano Zampini {
376a198735bSStefano Zampini   PetscBool      ismatis;
377a198735bSStefano Zampini   PetscErrorCode ierr;
378a198735bSStefano Zampini 
379a198735bSStefano Zampini   PetscFunctionBegin;
380a198735bSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
381a198735bSStefano Zampini   PetscValidHeaderSpecific(divudotp,MAT_CLASSID,2);
382a198735bSStefano Zampini   PetscCheckSameComm(pc,1,divudotp,2);
3838ae0ca82SStefano Zampini   PetscValidLogicalCollectiveBool(pc,trans,3);
3848ae0ca82SStefano Zampini   if (vl2l) PetscValidHeaderSpecific(divudotp,IS_CLASSID,4);
385a198735bSStefano Zampini   ierr = PetscObjectTypeCompare((PetscObject)divudotp,MATIS,&ismatis);CHKERRQ(ierr);
386a198735bSStefano Zampini   if (!ismatis) SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_ARG_WRONG,"Divergence matrix needs to be of type MATIS");
3878ae0ca82SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDivergenceMat_C",(PC,Mat,PetscBool,IS),(pc,divudotp,trans,vl2l));CHKERRQ(ierr);
388a198735bSStefano Zampini   PetscFunctionReturn(0);
389a198735bSStefano Zampini }
3902d505d7fSStefano Zampini 
3911dd7afcfSStefano Zampini static PetscErrorCode PCBDDCSetChangeOfBasisMat_BDDC(PC pc, Mat change, PetscBool interior)
392b9b85e73SStefano Zampini {
393b9b85e73SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
394b9b85e73SStefano Zampini   PetscErrorCode ierr;
395b9b85e73SStefano Zampini 
396b9b85e73SStefano Zampini   PetscFunctionBegin;
397b9b85e73SStefano Zampini   ierr = PetscObjectReference((PetscObject)change);CHKERRQ(ierr);
39856282151SStefano Zampini   ierr = MatDestroy(&pcbddc->user_ChangeOfBasisMatrix);CHKERRQ(ierr);
399b9b85e73SStefano Zampini   pcbddc->user_ChangeOfBasisMatrix = change;
4001dd7afcfSStefano Zampini   pcbddc->change_interior = interior;
401b9b85e73SStefano Zampini   PetscFunctionReturn(0);
402b9b85e73SStefano Zampini }
403b9b85e73SStefano Zampini /*@
404906d46d4SStefano Zampini  PCBDDCSetChangeOfBasisMat - Set user defined change of basis for dofs
405b9b85e73SStefano Zampini 
406b9b85e73SStefano Zampini    Collective on PC
407b9b85e73SStefano Zampini 
408b9b85e73SStefano Zampini    Input Parameters:
409b9b85e73SStefano Zampini +  pc - the preconditioning context
4101dd7afcfSStefano Zampini .  change - the change of basis matrix
4111dd7afcfSStefano Zampini -  interior - whether or not the change of basis modifies interior dofs
412b9b85e73SStefano Zampini 
413b9b85e73SStefano Zampini    Level: intermediate
414b9b85e73SStefano Zampini 
415b9b85e73SStefano Zampini    Notes:
416b9b85e73SStefano Zampini 
417b9b85e73SStefano Zampini .seealso: PCBDDC
418b9b85e73SStefano Zampini @*/
4191dd7afcfSStefano Zampini PetscErrorCode PCBDDCSetChangeOfBasisMat(PC pc, Mat change, PetscBool interior)
420b9b85e73SStefano Zampini {
421b9b85e73SStefano Zampini   PetscErrorCode ierr;
422b9b85e73SStefano Zampini 
423b9b85e73SStefano Zampini   PetscFunctionBegin;
424b9b85e73SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
425b9b85e73SStefano Zampini   PetscValidHeaderSpecific(change,MAT_CLASSID,2);
426906d46d4SStefano Zampini   PetscCheckSameComm(pc,1,change,2);
427906d46d4SStefano Zampini   if (pc->mat) {
428906d46d4SStefano Zampini     PetscInt rows_c,cols_c,rows,cols;
429906d46d4SStefano Zampini     ierr = MatGetSize(pc->mat,&rows,&cols);CHKERRQ(ierr);
430906d46d4SStefano Zampini     ierr = MatGetSize(change,&rows_c,&cols_c);CHKERRQ(ierr);
431e0fe2d75SToby Isaac     if (rows_c != rows) SETERRQ2(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Invalid number of rows for change of basis matrix! %D != %D",rows_c,rows);
432e0fe2d75SToby Isaac     if (cols_c != cols) SETERRQ2(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Invalid number of columns for change of basis matrix! %D != %D",cols_c,cols);
433906d46d4SStefano Zampini     ierr = MatGetLocalSize(pc->mat,&rows,&cols);CHKERRQ(ierr);
434906d46d4SStefano Zampini     ierr = MatGetLocalSize(change,&rows_c,&cols_c);CHKERRQ(ierr);
435e0fe2d75SToby Isaac     if (rows_c != rows) SETERRQ2(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Invalid number of local rows for change of basis matrix! %D != %D",rows_c,rows);
436e0fe2d75SToby Isaac     if (cols_c != cols) SETERRQ2(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Invalid number of local columns for change of basis matrix! %D != %D",cols_c,cols);
437906d46d4SStefano Zampini   }
4381dd7afcfSStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetChangeOfBasisMat_C",(PC,Mat,PetscBool),(pc,change,interior));CHKERRQ(ierr);
439b9b85e73SStefano Zampini   PetscFunctionReturn(0);
440b9b85e73SStefano Zampini }
4412d505d7fSStefano Zampini 
44230368db7SStefano Zampini static PetscErrorCode PCBDDCSetPrimalVerticesIS_BDDC(PC pc, IS PrimalVertices)
44330368db7SStefano Zampini {
44430368db7SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
44556282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
44630368db7SStefano Zampini   PetscErrorCode ierr;
44730368db7SStefano Zampini 
44830368db7SStefano Zampini   PetscFunctionBegin;
44956282151SStefano Zampini   ierr = PetscObjectReference((PetscObject)PrimalVertices);CHKERRQ(ierr);
45056282151SStefano Zampini   if (pcbddc->user_primal_vertices) {
45156282151SStefano Zampini     ierr = ISEqual(PrimalVertices,pcbddc->user_primal_vertices,&isequal);CHKERRQ(ierr);
45256282151SStefano Zampini   }
45330368db7SStefano Zampini   ierr = ISDestroy(&pcbddc->user_primal_vertices);CHKERRQ(ierr);
45430368db7SStefano Zampini   ierr = ISDestroy(&pcbddc->user_primal_vertices_local);CHKERRQ(ierr);
45530368db7SStefano Zampini   pcbddc->user_primal_vertices = PrimalVertices;
45656282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
45730368db7SStefano Zampini   PetscFunctionReturn(0);
45830368db7SStefano Zampini }
459ab8c8b98SStefano Zampini 
46030368db7SStefano Zampini /*@
46130368db7SStefano Zampini  PCBDDCSetPrimalVerticesIS - Set additional user defined primal vertices in PCBDDC
46230368db7SStefano Zampini 
46330368db7SStefano Zampini    Collective
46430368db7SStefano Zampini 
46530368db7SStefano Zampini    Input Parameters:
46630368db7SStefano Zampini +  pc - the preconditioning context
46730368db7SStefano Zampini -  PrimalVertices - index set of primal vertices in global numbering (can be empty)
46830368db7SStefano Zampini 
46930368db7SStefano Zampini    Level: intermediate
47030368db7SStefano Zampini 
47130368db7SStefano Zampini    Notes:
47230368db7SStefano Zampini      Any process can list any global node
47330368db7SStefano Zampini 
47430368db7SStefano Zampini .seealso: PCBDDC
47530368db7SStefano Zampini @*/
47630368db7SStefano Zampini PetscErrorCode PCBDDCSetPrimalVerticesIS(PC pc, IS PrimalVertices)
47730368db7SStefano Zampini {
47830368db7SStefano Zampini   PetscErrorCode ierr;
47930368db7SStefano Zampini 
48030368db7SStefano Zampini   PetscFunctionBegin;
48130368db7SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
48230368db7SStefano Zampini   PetscValidHeaderSpecific(PrimalVertices,IS_CLASSID,2);
48330368db7SStefano Zampini   PetscCheckSameComm(pc,1,PrimalVertices,2);
48430368db7SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetPrimalVerticesIS_C",(PC,IS),(pc,PrimalVertices));CHKERRQ(ierr);
48530368db7SStefano Zampini   PetscFunctionReturn(0);
48630368db7SStefano Zampini }
4872d505d7fSStefano Zampini 
488674ae819SStefano Zampini static PetscErrorCode PCBDDCSetPrimalVerticesLocalIS_BDDC(PC pc, IS PrimalVertices)
489674ae819SStefano Zampini {
490674ae819SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
49156282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
492674ae819SStefano Zampini   PetscErrorCode ierr;
4931e6b0712SBarry Smith 
494674ae819SStefano Zampini   PetscFunctionBegin;
49556282151SStefano Zampini   ierr = PetscObjectReference((PetscObject)PrimalVertices);CHKERRQ(ierr);
49656282151SStefano Zampini   if (pcbddc->user_primal_vertices_local) {
49756282151SStefano Zampini     ierr = ISEqual(PrimalVertices,pcbddc->user_primal_vertices_local,&isequal);CHKERRQ(ierr);
49856282151SStefano Zampini   }
499674ae819SStefano Zampini   ierr = ISDestroy(&pcbddc->user_primal_vertices);CHKERRQ(ierr);
50030368db7SStefano Zampini   ierr = ISDestroy(&pcbddc->user_primal_vertices_local);CHKERRQ(ierr);
50130368db7SStefano Zampini   pcbddc->user_primal_vertices_local = PrimalVertices;
50256282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
503674ae819SStefano Zampini   PetscFunctionReturn(0);
504674ae819SStefano Zampini }
505674ae819SStefano Zampini /*@
50628509bceSStefano Zampini  PCBDDCSetPrimalVerticesLocalIS - Set additional user defined primal vertices in PCBDDC
507674ae819SStefano Zampini 
50817eb1463SStefano Zampini    Collective
509674ae819SStefano Zampini 
510674ae819SStefano Zampini    Input Parameters:
511674ae819SStefano Zampini +  pc - the preconditioning context
51217eb1463SStefano Zampini -  PrimalVertices - index set of primal vertices in local numbering (can be empty)
513674ae819SStefano Zampini 
514674ae819SStefano Zampini    Level: intermediate
515674ae819SStefano Zampini 
516674ae819SStefano Zampini    Notes:
517674ae819SStefano Zampini 
518674ae819SStefano Zampini .seealso: PCBDDC
519674ae819SStefano Zampini @*/
520674ae819SStefano Zampini PetscErrorCode PCBDDCSetPrimalVerticesLocalIS(PC pc, IS PrimalVertices)
521674ae819SStefano Zampini {
522674ae819SStefano Zampini   PetscErrorCode ierr;
523674ae819SStefano Zampini 
524674ae819SStefano Zampini   PetscFunctionBegin;
525674ae819SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
526674ae819SStefano Zampini   PetscValidHeaderSpecific(PrimalVertices,IS_CLASSID,2);
52717eb1463SStefano Zampini   PetscCheckSameComm(pc,1,PrimalVertices,2);
528674ae819SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetPrimalVerticesLocalIS_C",(PC,IS),(pc,PrimalVertices));CHKERRQ(ierr);
529674ae819SStefano Zampini   PetscFunctionReturn(0);
530674ae819SStefano Zampini }
5312d505d7fSStefano Zampini 
5324fad6a16SStefano Zampini static PetscErrorCode PCBDDCSetCoarseningRatio_BDDC(PC pc,PetscInt k)
5334fad6a16SStefano Zampini {
5344fad6a16SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
5354fad6a16SStefano Zampini 
5364fad6a16SStefano Zampini   PetscFunctionBegin;
5374fad6a16SStefano Zampini   pcbddc->coarsening_ratio = k;
5384fad6a16SStefano Zampini   PetscFunctionReturn(0);
5394fad6a16SStefano Zampini }
5401e6b0712SBarry Smith 
5414fad6a16SStefano Zampini /*@
54228509bceSStefano Zampini  PCBDDCSetCoarseningRatio - Set coarsening ratio used in multilevel
5434fad6a16SStefano Zampini 
5444fad6a16SStefano Zampini    Logically collective on PC
5454fad6a16SStefano Zampini 
5464fad6a16SStefano Zampini    Input Parameters:
5474fad6a16SStefano Zampini +  pc - the preconditioning context
54828509bceSStefano Zampini -  k - coarsening ratio (H/h at the coarser level)
5494fad6a16SStefano Zampini 
5500f202f7eSStefano Zampini    Options Database Keys:
5510f202f7eSStefano Zampini .    -pc_bddc_coarsening_ratio
5524fad6a16SStefano Zampini 
5534fad6a16SStefano Zampini    Level: intermediate
5544fad6a16SStefano Zampini 
5554fad6a16SStefano Zampini    Notes:
5560f202f7eSStefano Zampini      Approximatively k subdomains at the finer level will be aggregated into a single subdomain at the coarser level
5574fad6a16SStefano Zampini 
5580f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetLevels()
5594fad6a16SStefano Zampini @*/
5604fad6a16SStefano Zampini PetscErrorCode PCBDDCSetCoarseningRatio(PC pc,PetscInt k)
5614fad6a16SStefano Zampini {
5624fad6a16SStefano Zampini   PetscErrorCode ierr;
5634fad6a16SStefano Zampini 
5644fad6a16SStefano Zampini   PetscFunctionBegin;
5654fad6a16SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
5662b510759SStefano Zampini   PetscValidLogicalCollectiveInt(pc,k,2);
5674fad6a16SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetCoarseningRatio_C",(PC,PetscInt),(pc,k));CHKERRQ(ierr);
5684fad6a16SStefano Zampini   PetscFunctionReturn(0);
5694fad6a16SStefano Zampini }
5702b510759SStefano Zampini 
571b8ffe317SStefano Zampini /* The following functions (PCBDDCSetUseExactDirichlet PCBDDCSetLevel) are not public */
572b8ffe317SStefano Zampini static PetscErrorCode PCBDDCSetUseExactDirichlet_BDDC(PC pc,PetscBool flg)
573b8ffe317SStefano Zampini {
574b8ffe317SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
575b8ffe317SStefano Zampini 
576b8ffe317SStefano Zampini   PetscFunctionBegin;
57785c4d303SStefano Zampini   pcbddc->use_exact_dirichlet_trick = flg;
578b8ffe317SStefano Zampini   PetscFunctionReturn(0);
579b8ffe317SStefano Zampini }
580b8ffe317SStefano Zampini 
581b8ffe317SStefano Zampini PetscErrorCode PCBDDCSetUseExactDirichlet(PC pc,PetscBool flg)
5822b510759SStefano Zampini {
5832b510759SStefano Zampini   PetscErrorCode ierr;
5842b510759SStefano Zampini 
5852b510759SStefano Zampini   PetscFunctionBegin;
5862b510759SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
587b8ffe317SStefano Zampini   PetscValidLogicalCollectiveBool(pc,flg,2);
588b8ffe317SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetUseExactDirichlet_C",(PC,PetscBool),(pc,flg));CHKERRQ(ierr);
5892b510759SStefano Zampini   PetscFunctionReturn(0);
5902b510759SStefano Zampini }
5911e6b0712SBarry Smith 
5922b510759SStefano Zampini static PetscErrorCode PCBDDCSetLevel_BDDC(PC pc,PetscInt level)
5934fad6a16SStefano Zampini {
5944fad6a16SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
5954fad6a16SStefano Zampini 
5964fad6a16SStefano Zampini   PetscFunctionBegin;
5972b510759SStefano Zampini   pcbddc->current_level = level;
5984fad6a16SStefano Zampini   PetscFunctionReturn(0);
5994fad6a16SStefano Zampini }
6001e6b0712SBarry Smith 
601b8ffe317SStefano Zampini PetscErrorCode PCBDDCSetLevel(PC pc,PetscInt level)
602b8ffe317SStefano Zampini {
603b8ffe317SStefano Zampini   PetscErrorCode ierr;
604b8ffe317SStefano Zampini 
605b8ffe317SStefano Zampini   PetscFunctionBegin;
606b8ffe317SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
607b8ffe317SStefano Zampini   PetscValidLogicalCollectiveInt(pc,level,2);
608b8ffe317SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetLevel_C",(PC,PetscInt),(pc,level));CHKERRQ(ierr);
609b8ffe317SStefano Zampini   PetscFunctionReturn(0);
610b8ffe317SStefano Zampini }
611b8ffe317SStefano Zampini 
6122b510759SStefano Zampini static PetscErrorCode PCBDDCSetLevels_BDDC(PC pc,PetscInt levels)
6132b510759SStefano Zampini {
6142b510759SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
6152b510759SStefano Zampini 
6162b510759SStefano Zampini   PetscFunctionBegin;
617*e569e4e1SStefano Zampini   if (levels > PETSC_PCBDDC_MAXLEVELS-1) SETERRQ1(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Maximum number of additional levels for BDDC is %d\n",PETSC_PCBDDC_MAXLEVELS-1);
6182b510759SStefano Zampini   pcbddc->max_levels = levels;
6192b510759SStefano Zampini   PetscFunctionReturn(0);
6202b510759SStefano Zampini }
6212b510759SStefano Zampini 
6224fad6a16SStefano Zampini /*@
62337ebbdf7SStefano Zampini  PCBDDCSetLevels - Sets the maximum number of additional levels allowed for multilevel BDDC
6244fad6a16SStefano Zampini 
6254fad6a16SStefano Zampini    Logically collective on PC
6264fad6a16SStefano Zampini 
6274fad6a16SStefano Zampini    Input Parameters:
6284fad6a16SStefano Zampini +  pc - the preconditioning context
62937ebbdf7SStefano Zampini -  levels - the maximum number of levels
6304fad6a16SStefano Zampini 
6310f202f7eSStefano Zampini    Options Database Keys:
6320f202f7eSStefano Zampini .    -pc_bddc_levels
6334fad6a16SStefano Zampini 
6344fad6a16SStefano Zampini    Level: intermediate
6354fad6a16SStefano Zampini 
6364fad6a16SStefano Zampini    Notes:
63737ebbdf7SStefano Zampini      The default value is 0, that gives the classical two-levels BDDC
6384fad6a16SStefano Zampini 
6390f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetCoarseningRatio()
6404fad6a16SStefano Zampini @*/
6412b510759SStefano Zampini PetscErrorCode PCBDDCSetLevels(PC pc,PetscInt levels)
6424fad6a16SStefano Zampini {
6434fad6a16SStefano Zampini   PetscErrorCode ierr;
6444fad6a16SStefano Zampini 
6454fad6a16SStefano Zampini   PetscFunctionBegin;
6464fad6a16SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
6472b510759SStefano Zampini   PetscValidLogicalCollectiveInt(pc,levels,2);
6482b510759SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetLevels_C",(PC,PetscInt),(pc,levels));CHKERRQ(ierr);
6494fad6a16SStefano Zampini   PetscFunctionReturn(0);
6504fad6a16SStefano Zampini }
6511e6b0712SBarry Smith 
6523b03a366Sstefano_zampini static PetscErrorCode PCBDDCSetDirichletBoundaries_BDDC(PC pc,IS DirichletBoundaries)
6533b03a366Sstefano_zampini {
6543b03a366Sstefano_zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
65556282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
6563b03a366Sstefano_zampini   PetscErrorCode ierr;
6573b03a366Sstefano_zampini 
6583b03a366Sstefano_zampini   PetscFunctionBegin;
65956282151SStefano Zampini   ierr = PetscObjectReference((PetscObject)DirichletBoundaries);CHKERRQ(ierr);
66056282151SStefano Zampini   if (pcbddc->DirichletBoundaries) {
66156282151SStefano Zampini     ierr = ISEqual(DirichletBoundaries,pcbddc->DirichletBoundaries,&isequal);CHKERRQ(ierr);
66256282151SStefano Zampini   }
663785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
664785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->DirichletBoundariesLocal);CHKERRQ(ierr);
6653b03a366Sstefano_zampini   ierr = ISDestroy(&pcbddc->DirichletBoundaries);CHKERRQ(ierr);
66636e030ebSStefano Zampini   pcbddc->DirichletBoundaries = DirichletBoundaries;
66756282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
6683b03a366Sstefano_zampini   PetscFunctionReturn(0);
6693b03a366Sstefano_zampini }
6701e6b0712SBarry Smith 
6713b03a366Sstefano_zampini /*@
67228509bceSStefano Zampini  PCBDDCSetDirichletBoundaries - Set IS defining Dirichlet boundaries for the global problem.
6733b03a366Sstefano_zampini 
674785d1243SStefano Zampini    Collective
6753b03a366Sstefano_zampini 
6763b03a366Sstefano_zampini    Input Parameters:
6773b03a366Sstefano_zampini +  pc - the preconditioning context
678785d1243SStefano Zampini -  DirichletBoundaries - parallel IS defining the Dirichlet boundaries
6793b03a366Sstefano_zampini 
6803b03a366Sstefano_zampini    Level: intermediate
6813b03a366Sstefano_zampini 
6820f202f7eSStefano Zampini    Notes:
6830f202f7eSStefano Zampini      Provide the information if you used MatZeroRows/Columns routines. Any process can list any global node
6843b03a366Sstefano_zampini 
6850f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetDirichletBoundariesLocal(), MatZeroRows(), MatZeroRowsColumns()
6863b03a366Sstefano_zampini @*/
6873b03a366Sstefano_zampini PetscErrorCode PCBDDCSetDirichletBoundaries(PC pc,IS DirichletBoundaries)
6883b03a366Sstefano_zampini {
6893b03a366Sstefano_zampini   PetscErrorCode ierr;
6903b03a366Sstefano_zampini 
6913b03a366Sstefano_zampini   PetscFunctionBegin;
6923b03a366Sstefano_zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
693674ae819SStefano Zampini   PetscValidHeaderSpecific(DirichletBoundaries,IS_CLASSID,2);
694785d1243SStefano Zampini   PetscCheckSameComm(pc,1,DirichletBoundaries,2);
6953b03a366Sstefano_zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDirichletBoundaries_C",(PC,IS),(pc,DirichletBoundaries));CHKERRQ(ierr);
6963b03a366Sstefano_zampini   PetscFunctionReturn(0);
6973b03a366Sstefano_zampini }
6981e6b0712SBarry Smith 
69982ba6b80SStefano Zampini static PetscErrorCode PCBDDCSetDirichletBoundariesLocal_BDDC(PC pc,IS DirichletBoundaries)
7003b03a366Sstefano_zampini {
7013b03a366Sstefano_zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
70256282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
7033b03a366Sstefano_zampini   PetscErrorCode ierr;
7043b03a366Sstefano_zampini 
7053b03a366Sstefano_zampini   PetscFunctionBegin;
70656282151SStefano Zampini   ierr = PetscObjectReference((PetscObject)DirichletBoundaries);CHKERRQ(ierr);
70756282151SStefano Zampini   if (pcbddc->DirichletBoundariesLocal) {
70856282151SStefano Zampini     ierr = ISEqual(DirichletBoundaries,pcbddc->DirichletBoundariesLocal,&isequal);CHKERRQ(ierr);
70956282151SStefano Zampini   }
710785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
711785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->DirichletBoundariesLocal);CHKERRQ(ierr);
7123b03a366Sstefano_zampini   ierr = ISDestroy(&pcbddc->DirichletBoundaries);CHKERRQ(ierr);
713785d1243SStefano Zampini   pcbddc->DirichletBoundariesLocal = DirichletBoundaries;
71456282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
7153b03a366Sstefano_zampini   PetscFunctionReturn(0);
7163b03a366Sstefano_zampini }
7173b03a366Sstefano_zampini 
7183b03a366Sstefano_zampini /*@
71982ba6b80SStefano Zampini  PCBDDCSetDirichletBoundariesLocal - Set IS defining Dirichlet boundaries for the global problem in local ordering.
7203b03a366Sstefano_zampini 
721785d1243SStefano Zampini    Collective
7223b03a366Sstefano_zampini 
7233b03a366Sstefano_zampini    Input Parameters:
7243b03a366Sstefano_zampini +  pc - the preconditioning context
72582ba6b80SStefano Zampini -  DirichletBoundaries - parallel IS defining the Dirichlet boundaries (in local ordering)
7263b03a366Sstefano_zampini 
7273b03a366Sstefano_zampini    Level: intermediate
7283b03a366Sstefano_zampini 
7293b03a366Sstefano_zampini    Notes:
7303b03a366Sstefano_zampini 
7310f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetDirichletBoundaries(), MatZeroRows(), MatZeroRowsColumns()
7323b03a366Sstefano_zampini @*/
73382ba6b80SStefano Zampini PetscErrorCode PCBDDCSetDirichletBoundariesLocal(PC pc,IS DirichletBoundaries)
7343b03a366Sstefano_zampini {
7353b03a366Sstefano_zampini   PetscErrorCode ierr;
7363b03a366Sstefano_zampini 
7373b03a366Sstefano_zampini   PetscFunctionBegin;
7383b03a366Sstefano_zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
7393b03a366Sstefano_zampini   PetscValidHeaderSpecific(DirichletBoundaries,IS_CLASSID,2);
74082ba6b80SStefano Zampini   PetscCheckSameComm(pc,1,DirichletBoundaries,2);
74182ba6b80SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDirichletBoundariesLocal_C",(PC,IS),(pc,DirichletBoundaries));CHKERRQ(ierr);
7423b03a366Sstefano_zampini   PetscFunctionReturn(0);
7433b03a366Sstefano_zampini }
7443b03a366Sstefano_zampini 
74553cdbc3dSStefano Zampini static PetscErrorCode PCBDDCSetNeumannBoundaries_BDDC(PC pc,IS NeumannBoundaries)
7460c7d97c5SJed Brown {
7470c7d97c5SJed Brown   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
74856282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
74953cdbc3dSStefano Zampini   PetscErrorCode ierr;
7500c7d97c5SJed Brown 
7510c7d97c5SJed Brown   PetscFunctionBegin;
75256282151SStefano Zampini   ierr = PetscObjectReference((PetscObject)NeumannBoundaries);CHKERRQ(ierr);
75356282151SStefano Zampini   if (pcbddc->NeumannBoundaries) {
75456282151SStefano Zampini     ierr = ISEqual(NeumannBoundaries,pcbddc->NeumannBoundaries,&isequal);CHKERRQ(ierr);
75556282151SStefano Zampini   }
756785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
757785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->NeumannBoundariesLocal);CHKERRQ(ierr);
75853cdbc3dSStefano Zampini   ierr = ISDestroy(&pcbddc->NeumannBoundaries);CHKERRQ(ierr);
75936e030ebSStefano Zampini   pcbddc->NeumannBoundaries = NeumannBoundaries;
76056282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
7610c7d97c5SJed Brown   PetscFunctionReturn(0);
7620c7d97c5SJed Brown }
7631e6b0712SBarry Smith 
76457527edcSJed Brown /*@
76528509bceSStefano Zampini  PCBDDCSetNeumannBoundaries - Set IS defining Neumann boundaries for the global problem.
76657527edcSJed Brown 
767785d1243SStefano Zampini    Collective
76857527edcSJed Brown 
76957527edcSJed Brown    Input Parameters:
77057527edcSJed Brown +  pc - the preconditioning context
771785d1243SStefano Zampini -  NeumannBoundaries - parallel IS defining the Neumann boundaries
77257527edcSJed Brown 
77357527edcSJed Brown    Level: intermediate
77457527edcSJed Brown 
7750f202f7eSStefano Zampini    Notes:
7760f202f7eSStefano Zampini      Any process can list any global node
77757527edcSJed Brown 
7780f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetNeumannBoundariesLocal()
77957527edcSJed Brown @*/
78053cdbc3dSStefano Zampini PetscErrorCode PCBDDCSetNeumannBoundaries(PC pc,IS NeumannBoundaries)
7810c7d97c5SJed Brown {
7820c7d97c5SJed Brown   PetscErrorCode ierr;
7830c7d97c5SJed Brown 
7840c7d97c5SJed Brown   PetscFunctionBegin;
7850c7d97c5SJed Brown   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
786674ae819SStefano Zampini   PetscValidHeaderSpecific(NeumannBoundaries,IS_CLASSID,2);
787785d1243SStefano Zampini   PetscCheckSameComm(pc,1,NeumannBoundaries,2);
78853cdbc3dSStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetNeumannBoundaries_C",(PC,IS),(pc,NeumannBoundaries));CHKERRQ(ierr);
78953cdbc3dSStefano Zampini   PetscFunctionReturn(0);
79053cdbc3dSStefano Zampini }
7911e6b0712SBarry Smith 
79282ba6b80SStefano Zampini static PetscErrorCode PCBDDCSetNeumannBoundariesLocal_BDDC(PC pc,IS NeumannBoundaries)
7930c7d97c5SJed Brown {
7940c7d97c5SJed Brown   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
79556282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
7960c7d97c5SJed Brown   PetscErrorCode ierr;
7970c7d97c5SJed Brown 
7980c7d97c5SJed Brown   PetscFunctionBegin;
79956282151SStefano Zampini   ierr = PetscObjectReference((PetscObject)NeumannBoundaries);CHKERRQ(ierr);
80056282151SStefano Zampini   if (pcbddc->NeumannBoundariesLocal) {
80156282151SStefano Zampini     ierr = ISEqual(NeumannBoundaries,pcbddc->NeumannBoundariesLocal,&isequal);CHKERRQ(ierr);
80256282151SStefano Zampini   }
803785d1243SStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
804785d1243SStefano Zampini   ierr = ISDestroy(&pcbddc->NeumannBoundariesLocal);CHKERRQ(ierr);
8050c7d97c5SJed Brown   ierr = ISDestroy(&pcbddc->NeumannBoundaries);CHKERRQ(ierr);
806785d1243SStefano Zampini   pcbddc->NeumannBoundariesLocal = NeumannBoundaries;
80756282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
8080c7d97c5SJed Brown   PetscFunctionReturn(0);
8090c7d97c5SJed Brown }
8100c7d97c5SJed Brown 
8110c7d97c5SJed Brown /*@
81282ba6b80SStefano Zampini  PCBDDCSetNeumannBoundariesLocal - Set IS defining Neumann boundaries for the global problem in local ordering.
8130c7d97c5SJed Brown 
814785d1243SStefano Zampini    Collective
8150c7d97c5SJed Brown 
8160c7d97c5SJed Brown    Input Parameters:
8170c7d97c5SJed Brown +  pc - the preconditioning context
81882ba6b80SStefano Zampini -  NeumannBoundaries - parallel IS defining the subdomain part of Neumann boundaries (in local ordering)
8190c7d97c5SJed Brown 
8200c7d97c5SJed Brown    Level: intermediate
8210c7d97c5SJed Brown 
8220c7d97c5SJed Brown    Notes:
8230c7d97c5SJed Brown 
8240f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCSetNeumannBoundaries()
8250c7d97c5SJed Brown @*/
82682ba6b80SStefano Zampini PetscErrorCode PCBDDCSetNeumannBoundariesLocal(PC pc,IS NeumannBoundaries)
8270c7d97c5SJed Brown {
8280c7d97c5SJed Brown   PetscErrorCode ierr;
8290c7d97c5SJed Brown 
8300c7d97c5SJed Brown   PetscFunctionBegin;
8310c7d97c5SJed Brown   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
8320c7d97c5SJed Brown   PetscValidHeaderSpecific(NeumannBoundaries,IS_CLASSID,2);
83382ba6b80SStefano Zampini   PetscCheckSameComm(pc,1,NeumannBoundaries,2);
83482ba6b80SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetNeumannBoundariesLocal_C",(PC,IS),(pc,NeumannBoundaries));CHKERRQ(ierr);
83553cdbc3dSStefano Zampini   PetscFunctionReturn(0);
83653cdbc3dSStefano Zampini }
83753cdbc3dSStefano Zampini 
838da1bb401SStefano Zampini static PetscErrorCode PCBDDCGetDirichletBoundaries_BDDC(PC pc,IS *DirichletBoundaries)
839da1bb401SStefano Zampini {
840da1bb401SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
841da1bb401SStefano Zampini 
842da1bb401SStefano Zampini   PetscFunctionBegin;
843da1bb401SStefano Zampini   *DirichletBoundaries = pcbddc->DirichletBoundaries;
844da1bb401SStefano Zampini   PetscFunctionReturn(0);
845da1bb401SStefano Zampini }
8461e6b0712SBarry Smith 
847da1bb401SStefano Zampini /*@
848785d1243SStefano Zampini  PCBDDCGetDirichletBoundaries - Get parallel IS for Dirichlet boundaries
849da1bb401SStefano Zampini 
850785d1243SStefano Zampini    Collective
851785d1243SStefano Zampini 
852785d1243SStefano Zampini    Input Parameters:
853785d1243SStefano Zampini .  pc - the preconditioning context
854785d1243SStefano Zampini 
855785d1243SStefano Zampini    Output Parameters:
856785d1243SStefano Zampini .  DirichletBoundaries - index set defining the Dirichlet boundaries
857785d1243SStefano Zampini 
858785d1243SStefano Zampini    Level: intermediate
859785d1243SStefano Zampini 
8600f202f7eSStefano Zampini    Notes:
8610f202f7eSStefano Zampini      The IS returned (if any) is the same passed in earlier by the user with PCBDDCSetDirichletBoundaries
862785d1243SStefano Zampini 
863785d1243SStefano Zampini .seealso: PCBDDC
864785d1243SStefano Zampini @*/
865785d1243SStefano Zampini PetscErrorCode PCBDDCGetDirichletBoundaries(PC pc,IS *DirichletBoundaries)
866785d1243SStefano Zampini {
867785d1243SStefano Zampini   PetscErrorCode ierr;
868785d1243SStefano Zampini 
869785d1243SStefano Zampini   PetscFunctionBegin;
870785d1243SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
871785d1243SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetDirichletBoundaries_C",(PC,IS*),(pc,DirichletBoundaries));CHKERRQ(ierr);
872785d1243SStefano Zampini   PetscFunctionReturn(0);
873785d1243SStefano Zampini }
874785d1243SStefano Zampini 
875785d1243SStefano Zampini static PetscErrorCode PCBDDCGetDirichletBoundariesLocal_BDDC(PC pc,IS *DirichletBoundaries)
876785d1243SStefano Zampini {
877785d1243SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
878785d1243SStefano Zampini 
879785d1243SStefano Zampini   PetscFunctionBegin;
880785d1243SStefano Zampini   *DirichletBoundaries = pcbddc->DirichletBoundariesLocal;
881785d1243SStefano Zampini   PetscFunctionReturn(0);
882785d1243SStefano Zampini }
883785d1243SStefano Zampini 
884da1bb401SStefano Zampini /*@
88582ba6b80SStefano Zampini  PCBDDCGetDirichletBoundariesLocal - Get parallel IS for Dirichlet boundaries (in local ordering)
886da1bb401SStefano Zampini 
887785d1243SStefano Zampini    Collective
888da1bb401SStefano Zampini 
889da1bb401SStefano Zampini    Input Parameters:
89028509bceSStefano Zampini .  pc - the preconditioning context
891da1bb401SStefano Zampini 
892da1bb401SStefano Zampini    Output Parameters:
89328509bceSStefano Zampini .  DirichletBoundaries - index set defining the subdomain part of Dirichlet boundaries
894da1bb401SStefano Zampini 
895da1bb401SStefano Zampini    Level: intermediate
896da1bb401SStefano Zampini 
897da1bb401SStefano Zampini    Notes:
8980f202f7eSStefano Zampini      The IS returned could be the same passed in earlier by the user (if provided with PCBDDCSetDirichletBoundariesLocal) or a global-to-local map of the global IS (if provided with PCBDDCSetDirichletBoundaries).
8990f202f7eSStefano Zampini           In the latter case, the IS will be available after PCSetUp.
900da1bb401SStefano Zampini 
901da1bb401SStefano Zampini .seealso: PCBDDC
902da1bb401SStefano Zampini @*/
90382ba6b80SStefano Zampini PetscErrorCode PCBDDCGetDirichletBoundariesLocal(PC pc,IS *DirichletBoundaries)
904da1bb401SStefano Zampini {
905da1bb401SStefano Zampini   PetscErrorCode ierr;
906da1bb401SStefano Zampini 
907da1bb401SStefano Zampini   PetscFunctionBegin;
908da1bb401SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
90982ba6b80SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetDirichletBoundariesLocal_C",(PC,IS*),(pc,DirichletBoundaries));CHKERRQ(ierr);
910da1bb401SStefano Zampini   PetscFunctionReturn(0);
911da1bb401SStefano Zampini }
9121e6b0712SBarry Smith 
91353cdbc3dSStefano Zampini static PetscErrorCode PCBDDCGetNeumannBoundaries_BDDC(PC pc,IS *NeumannBoundaries)
91453cdbc3dSStefano Zampini {
91553cdbc3dSStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
91653cdbc3dSStefano Zampini 
91753cdbc3dSStefano Zampini   PetscFunctionBegin;
91853cdbc3dSStefano Zampini   *NeumannBoundaries = pcbddc->NeumannBoundaries;
91953cdbc3dSStefano Zampini   PetscFunctionReturn(0);
92053cdbc3dSStefano Zampini }
9211e6b0712SBarry Smith 
92253cdbc3dSStefano Zampini /*@
923785d1243SStefano Zampini  PCBDDCGetNeumannBoundaries - Get parallel IS for Neumann boundaries
92453cdbc3dSStefano Zampini 
925785d1243SStefano Zampini    Collective
926785d1243SStefano Zampini 
927785d1243SStefano Zampini    Input Parameters:
928785d1243SStefano Zampini .  pc - the preconditioning context
929785d1243SStefano Zampini 
930785d1243SStefano Zampini    Output Parameters:
931785d1243SStefano Zampini .  NeumannBoundaries - index set defining the Neumann boundaries
932785d1243SStefano Zampini 
933785d1243SStefano Zampini    Level: intermediate
934785d1243SStefano Zampini 
9350f202f7eSStefano Zampini    Notes:
9360f202f7eSStefano Zampini      The IS returned (if any) is the same passed in earlier by the user with PCBDDCSetNeumannBoundaries
937785d1243SStefano Zampini 
938785d1243SStefano Zampini .seealso: PCBDDC
939785d1243SStefano Zampini @*/
940785d1243SStefano Zampini PetscErrorCode PCBDDCGetNeumannBoundaries(PC pc,IS *NeumannBoundaries)
941785d1243SStefano Zampini {
942785d1243SStefano Zampini   PetscErrorCode ierr;
943785d1243SStefano Zampini 
944785d1243SStefano Zampini   PetscFunctionBegin;
945785d1243SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
946785d1243SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetNeumannBoundaries_C",(PC,IS*),(pc,NeumannBoundaries));CHKERRQ(ierr);
947785d1243SStefano Zampini   PetscFunctionReturn(0);
948785d1243SStefano Zampini }
949785d1243SStefano Zampini 
950785d1243SStefano Zampini static PetscErrorCode PCBDDCGetNeumannBoundariesLocal_BDDC(PC pc,IS *NeumannBoundaries)
951785d1243SStefano Zampini {
952785d1243SStefano Zampini   PC_BDDC  *pcbddc = (PC_BDDC*)pc->data;
953785d1243SStefano Zampini 
954785d1243SStefano Zampini   PetscFunctionBegin;
955785d1243SStefano Zampini   *NeumannBoundaries = pcbddc->NeumannBoundariesLocal;
956785d1243SStefano Zampini   PetscFunctionReturn(0);
957785d1243SStefano Zampini }
958785d1243SStefano Zampini 
95953cdbc3dSStefano Zampini /*@
96082ba6b80SStefano Zampini  PCBDDCGetNeumannBoundariesLocal - Get parallel IS for Neumann boundaries (in local ordering)
96153cdbc3dSStefano Zampini 
962785d1243SStefano Zampini    Collective
96353cdbc3dSStefano Zampini 
96453cdbc3dSStefano Zampini    Input Parameters:
96528509bceSStefano Zampini .  pc - the preconditioning context
96653cdbc3dSStefano Zampini 
96753cdbc3dSStefano Zampini    Output Parameters:
96828509bceSStefano Zampini .  NeumannBoundaries - index set defining the subdomain part of Neumann boundaries
96953cdbc3dSStefano Zampini 
97053cdbc3dSStefano Zampini    Level: intermediate
97153cdbc3dSStefano Zampini 
97253cdbc3dSStefano Zampini    Notes:
9730f202f7eSStefano Zampini      The IS returned could be the same passed in earlier by the user (if provided with PCBDDCSetNeumannBoundariesLocal) or a global-to-local map of the global IS (if provided with PCBDDCSetNeumannBoundaries).
9740f202f7eSStefano Zampini           In the latter case, the IS will be available after PCSetUp.
97553cdbc3dSStefano Zampini 
97653cdbc3dSStefano Zampini .seealso: PCBDDC
97753cdbc3dSStefano Zampini @*/
97882ba6b80SStefano Zampini PetscErrorCode PCBDDCGetNeumannBoundariesLocal(PC pc,IS *NeumannBoundaries)
97953cdbc3dSStefano Zampini {
98053cdbc3dSStefano Zampini   PetscErrorCode ierr;
98153cdbc3dSStefano Zampini 
98253cdbc3dSStefano Zampini   PetscFunctionBegin;
98353cdbc3dSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
98482ba6b80SStefano Zampini   ierr = PetscUseMethod(pc,"PCBDDCGetNeumannBoundariesLocal_C",(PC,IS*),(pc,NeumannBoundaries));CHKERRQ(ierr);
9850c7d97c5SJed Brown   PetscFunctionReturn(0);
9860c7d97c5SJed Brown }
9871e6b0712SBarry Smith 
9881a83f524SJed Brown static PetscErrorCode PCBDDCSetLocalAdjacencyGraph_BDDC(PC pc, PetscInt nvtxs,const PetscInt xadj[],const PetscInt adjncy[], PetscCopyMode copymode)
98936e030ebSStefano Zampini {
99036e030ebSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
991da1bb401SStefano Zampini   PCBDDCGraph    mat_graph = pcbddc->mat_graph;
99256282151SStefano Zampini   PetscBool      same_data = PETSC_FALSE;
993da1bb401SStefano Zampini   PetscErrorCode ierr;
99436e030ebSStefano Zampini 
99536e030ebSStefano Zampini   PetscFunctionBegin;
9968687889aSStefano Zampini   if (!nvtxs) {
99704194a47SStefano Zampini     if (copymode == PETSC_OWN_POINTER) {
99804194a47SStefano Zampini       ierr = PetscFree(xadj);CHKERRQ(ierr);
99904194a47SStefano Zampini       ierr = PetscFree(adjncy);CHKERRQ(ierr);
100004194a47SStefano Zampini     }
10018687889aSStefano Zampini     ierr = PCBDDCGraphResetCSR(mat_graph);CHKERRQ(ierr);
10028687889aSStefano Zampini     PetscFunctionReturn(0);
10038687889aSStefano Zampini   }
100466da6bd7Sstefano_zampini   if (mat_graph->nvtxs == nvtxs && mat_graph->freecsr) { /* we own the data */
100556282151SStefano Zampini     if (mat_graph->xadj == xadj && mat_graph->adjncy == adjncy) same_data = PETSC_TRUE;
100656282151SStefano Zampini     if (!same_data && mat_graph->xadj[nvtxs] == xadj[nvtxs]) {
10072d505d7fSStefano Zampini       ierr = PetscMemcmp(xadj,mat_graph->xadj,(nvtxs+1)*sizeof(PetscInt),&same_data);CHKERRQ(ierr);
10082d505d7fSStefano Zampini       if (same_data) {
10092d505d7fSStefano Zampini         ierr = PetscMemcmp(adjncy,mat_graph->adjncy,xadj[nvtxs]*sizeof(PetscInt),&same_data);CHKERRQ(ierr);
10102d505d7fSStefano Zampini       }
101156282151SStefano Zampini     }
101256282151SStefano Zampini   }
101356282151SStefano Zampini   if (!same_data) {
1014674ae819SStefano Zampini     /* free old CSR */
1015674ae819SStefano Zampini     ierr = PCBDDCGraphResetCSR(mat_graph);CHKERRQ(ierr);
1016674ae819SStefano Zampini     /* get CSR into graph structure */
1017da1bb401SStefano Zampini     if (copymode == PETSC_COPY_VALUES) {
1018854ce69bSBarry Smith       ierr = PetscMalloc1(nvtxs+1,&mat_graph->xadj);CHKERRQ(ierr);
1019785e854fSJed Brown       ierr = PetscMalloc1(xadj[nvtxs],&mat_graph->adjncy);CHKERRQ(ierr);
1020674ae819SStefano Zampini       ierr = PetscMemcpy(mat_graph->xadj,xadj,(nvtxs+1)*sizeof(PetscInt));CHKERRQ(ierr);
1021674ae819SStefano Zampini       ierr = PetscMemcpy(mat_graph->adjncy,adjncy,xadj[nvtxs]*sizeof(PetscInt));CHKERRQ(ierr);
1022a1dbd327SStefano Zampini       mat_graph->freecsr = PETSC_TRUE;
1023da1bb401SStefano Zampini     } else if (copymode == PETSC_OWN_POINTER) {
10241a83f524SJed Brown       mat_graph->xadj    = (PetscInt*)xadj;
10251a83f524SJed Brown       mat_graph->adjncy  = (PetscInt*)adjncy;
1026a1dbd327SStefano Zampini       mat_graph->freecsr = PETSC_TRUE;
1027a1dbd327SStefano Zampini     } else if (copymode == PETSC_USE_POINTER) {
1028a1dbd327SStefano Zampini       mat_graph->xadj    = (PetscInt*)xadj;
1029a1dbd327SStefano Zampini       mat_graph->adjncy  = (PetscInt*)adjncy;
1030a1dbd327SStefano Zampini       mat_graph->freecsr = PETSC_FALSE;
1031e0fe2d75SToby Isaac     } else SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Unsupported copy mode %D",copymode);
1032575ad6abSStefano Zampini     mat_graph->nvtxs_csr = nvtxs;
103356282151SStefano Zampini     pcbddc->recompute_topography = PETSC_TRUE;
103456282151SStefano Zampini   }
103536e030ebSStefano Zampini   PetscFunctionReturn(0);
103636e030ebSStefano Zampini }
10371e6b0712SBarry Smith 
103836e030ebSStefano Zampini /*@
103954fffbccSStefano Zampini  PCBDDCSetLocalAdjacencyGraph - Set adjacency structure (CSR graph) of the local degrees of freedom.
104036e030ebSStefano Zampini 
104136e030ebSStefano Zampini    Not collective
104236e030ebSStefano Zampini 
104336e030ebSStefano Zampini    Input Parameters:
104454fffbccSStefano Zampini +  pc - the preconditioning context.
104554fffbccSStefano Zampini .  nvtxs - number of local vertices of the graph (i.e., the number of local dofs).
104654fffbccSStefano Zampini .  xadj, adjncy - the connectivity of the dofs in CSR format.
104754fffbccSStefano Zampini -  copymode - supported modes are PETSC_COPY_VALUES, PETSC_USE_POINTER or PETSC_OWN_POINTER.
104836e030ebSStefano Zampini 
104936e030ebSStefano Zampini    Level: intermediate
105036e030ebSStefano Zampini 
105195452b02SPatrick Sanan    Notes:
105295452b02SPatrick Sanan     A dof is considered connected with all local dofs if xadj[dof+1]-xadj[dof] == 1 and adjncy[xadj[dof]] is negative.
105336e030ebSStefano Zampini 
105428509bceSStefano Zampini .seealso: PCBDDC,PetscCopyMode
105536e030ebSStefano Zampini @*/
10561a83f524SJed Brown PetscErrorCode PCBDDCSetLocalAdjacencyGraph(PC pc,PetscInt nvtxs,const PetscInt xadj[],const PetscInt adjncy[], PetscCopyMode copymode)
105736e030ebSStefano Zampini {
1058575ad6abSStefano Zampini   void (*f)(void) = 0;
105936e030ebSStefano Zampini   PetscErrorCode ierr;
106036e030ebSStefano Zampini 
106136e030ebSStefano Zampini   PetscFunctionBegin;
106236e030ebSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
10638687889aSStefano Zampini   if (nvtxs) {
1064674ae819SStefano Zampini     PetscValidIntPointer(xadj,3);
10651633d1f0SStefano Zampini     if (xadj[nvtxs]) PetscValidIntPointer(adjncy,4);
10668687889aSStefano Zampini   }
10671a83f524SJed Brown   ierr = PetscTryMethod(pc,"PCBDDCSetLocalAdjacencyGraph_C",(PC,PetscInt,const PetscInt[],const PetscInt[],PetscCopyMode),(pc,nvtxs,xadj,adjncy,copymode));CHKERRQ(ierr);
1068575ad6abSStefano Zampini   /* free arrays if PCBDDC is not the PC type */
1069575ad6abSStefano Zampini   ierr = PetscObjectQueryFunction((PetscObject)pc,"PCBDDCSetLocalAdjacencyGraph_C",&f);CHKERRQ(ierr);
1070575ad6abSStefano Zampini   if (!f && copymode == PETSC_OWN_POINTER) {
1071575ad6abSStefano Zampini     ierr = PetscFree(xadj);CHKERRQ(ierr);
1072575ad6abSStefano Zampini     ierr = PetscFree(adjncy);CHKERRQ(ierr);
1073da1bb401SStefano Zampini   }
107436e030ebSStefano Zampini   PetscFunctionReturn(0);
107536e030ebSStefano Zampini }
10761e6b0712SBarry Smith 
107763602bcaSStefano Zampini static PetscErrorCode PCBDDCSetDofsSplittingLocal_BDDC(PC pc,PetscInt n_is, IS ISForDofs[])
107863602bcaSStefano Zampini {
107963602bcaSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
108063602bcaSStefano Zampini   PetscInt       i;
108156282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
108263602bcaSStefano Zampini   PetscErrorCode ierr;
108363602bcaSStefano Zampini 
108463602bcaSStefano Zampini   PetscFunctionBegin;
108556282151SStefano Zampini   if (pcbddc->n_ISForDofsLocal == n_is) {
108656282151SStefano Zampini     for (i=0;i<n_is;i++) {
108756282151SStefano Zampini       PetscBool isequalt;
108856282151SStefano Zampini       ierr = ISEqual(ISForDofs[i],pcbddc->ISForDofsLocal[i],&isequalt);CHKERRQ(ierr);
108956282151SStefano Zampini       if (!isequalt) break;
109056282151SStefano Zampini     }
109156282151SStefano Zampini     if (i == n_is) isequal = PETSC_TRUE;
109256282151SStefano Zampini   }
109356282151SStefano Zampini   for (i=0;i<n_is;i++) {
109456282151SStefano Zampini     ierr = PetscObjectReference((PetscObject)ISForDofs[i]);CHKERRQ(ierr);
109556282151SStefano Zampini   }
109663602bcaSStefano Zampini   /* Destroy ISes if they were already set */
109763602bcaSStefano Zampini   for (i=0;i<pcbddc->n_ISForDofsLocal;i++) {
109863602bcaSStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofsLocal[i]);CHKERRQ(ierr);
109963602bcaSStefano Zampini   }
110063602bcaSStefano Zampini   ierr = PetscFree(pcbddc->ISForDofsLocal);CHKERRQ(ierr);
110163602bcaSStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
110263602bcaSStefano Zampini   for (i=0;i<pcbddc->n_ISForDofs;i++) {
110363602bcaSStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofs[i]);CHKERRQ(ierr);
110463602bcaSStefano Zampini   }
110563602bcaSStefano Zampini   ierr = PetscFree(pcbddc->ISForDofs);CHKERRQ(ierr);
110663602bcaSStefano Zampini   pcbddc->n_ISForDofs = 0;
110763602bcaSStefano Zampini   /* allocate space then set */
1108d02579f5SStefano Zampini   if (n_is) {
1109d02579f5SStefano Zampini     ierr = PetscMalloc1(n_is,&pcbddc->ISForDofsLocal);CHKERRQ(ierr);
1110d02579f5SStefano Zampini   }
111163602bcaSStefano Zampini   for (i=0;i<n_is;i++) {
111263602bcaSStefano Zampini     pcbddc->ISForDofsLocal[i] = ISForDofs[i];
111363602bcaSStefano Zampini   }
111463602bcaSStefano Zampini   pcbddc->n_ISForDofsLocal = n_is;
111563602bcaSStefano Zampini   if (n_is) pcbddc->user_provided_isfordofs = PETSC_TRUE;
111656282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
111763602bcaSStefano Zampini   PetscFunctionReturn(0);
111863602bcaSStefano Zampini }
111963602bcaSStefano Zampini 
112063602bcaSStefano Zampini /*@
112163602bcaSStefano Zampini  PCBDDCSetDofsSplittingLocal - Set index sets defining fields of the local subdomain matrix
112263602bcaSStefano Zampini 
112363602bcaSStefano Zampini    Collective
112463602bcaSStefano Zampini 
112563602bcaSStefano Zampini    Input Parameters:
112663602bcaSStefano Zampini +  pc - the preconditioning context
11270f202f7eSStefano Zampini .  n_is - number of index sets defining the fields
11280f202f7eSStefano Zampini -  ISForDofs - array of IS describing the fields in local ordering
112963602bcaSStefano Zampini 
113063602bcaSStefano Zampini    Level: intermediate
113163602bcaSStefano Zampini 
11320f202f7eSStefano Zampini    Notes:
11330f202f7eSStefano Zampini      n_is should be the same among processes. Not all nodes need to be listed: unlisted nodes will belong to the complement field.
113463602bcaSStefano Zampini 
113563602bcaSStefano Zampini .seealso: PCBDDC
113663602bcaSStefano Zampini @*/
113763602bcaSStefano Zampini PetscErrorCode PCBDDCSetDofsSplittingLocal(PC pc,PetscInt n_is, IS ISForDofs[])
113863602bcaSStefano Zampini {
113963602bcaSStefano Zampini   PetscInt       i;
114063602bcaSStefano Zampini   PetscErrorCode ierr;
114163602bcaSStefano Zampini 
114263602bcaSStefano Zampini   PetscFunctionBegin;
114363602bcaSStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
114463602bcaSStefano Zampini   PetscValidLogicalCollectiveInt(pc,n_is,2);
114563602bcaSStefano Zampini   for (i=0;i<n_is;i++) {
114663602bcaSStefano Zampini     PetscCheckSameComm(pc,1,ISForDofs[i],3);
114763602bcaSStefano Zampini     PetscValidHeaderSpecific(ISForDofs[i],IS_CLASSID,3);
114863602bcaSStefano Zampini   }
1149e71e7a71SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDofsSplittingLocal_C",(PC,PetscInt,IS[]),(pc,n_is,ISForDofs));CHKERRQ(ierr);
115063602bcaSStefano Zampini   PetscFunctionReturn(0);
115163602bcaSStefano Zampini }
115263602bcaSStefano Zampini 
11539c0446d6SStefano Zampini static PetscErrorCode PCBDDCSetDofsSplitting_BDDC(PC pc,PetscInt n_is, IS ISForDofs[])
11549c0446d6SStefano Zampini {
11559c0446d6SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
11569c0446d6SStefano Zampini   PetscInt       i;
115756282151SStefano Zampini   PetscBool      isequal = PETSC_FALSE;
11589c0446d6SStefano Zampini   PetscErrorCode ierr;
11599c0446d6SStefano Zampini 
11609c0446d6SStefano Zampini   PetscFunctionBegin;
116156282151SStefano Zampini   if (pcbddc->n_ISForDofs == n_is) {
116256282151SStefano Zampini     for (i=0;i<n_is;i++) {
116356282151SStefano Zampini       PetscBool isequalt;
116456282151SStefano Zampini       ierr = ISEqual(ISForDofs[i],pcbddc->ISForDofs[i],&isequalt);CHKERRQ(ierr);
116556282151SStefano Zampini       if (!isequalt) break;
116656282151SStefano Zampini     }
116756282151SStefano Zampini     if (i == n_is) isequal = PETSC_TRUE;
116856282151SStefano Zampini   }
116956282151SStefano Zampini   for (i=0;i<n_is;i++) {
117056282151SStefano Zampini     ierr = PetscObjectReference((PetscObject)ISForDofs[i]);CHKERRQ(ierr);
117156282151SStefano Zampini   }
1172da1bb401SStefano Zampini   /* Destroy ISes if they were already set */
11739c0446d6SStefano Zampini   for (i=0;i<pcbddc->n_ISForDofs;i++) {
11749c0446d6SStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofs[i]);CHKERRQ(ierr);
11759c0446d6SStefano Zampini   }
1176d11ae9bbSstefano_zampini   ierr = PetscFree(pcbddc->ISForDofs);CHKERRQ(ierr);
117763602bcaSStefano Zampini   /* last user setting takes precendence -> destroy any other customization */
117863602bcaSStefano Zampini   for (i=0;i<pcbddc->n_ISForDofsLocal;i++) {
117963602bcaSStefano Zampini     ierr = ISDestroy(&pcbddc->ISForDofsLocal[i]);CHKERRQ(ierr);
118063602bcaSStefano Zampini   }
118163602bcaSStefano Zampini   ierr = PetscFree(pcbddc->ISForDofsLocal);CHKERRQ(ierr);
118263602bcaSStefano Zampini   pcbddc->n_ISForDofsLocal = 0;
1183da1bb401SStefano Zampini   /* allocate space then set */
1184d02579f5SStefano Zampini   if (n_is) {
1185785e854fSJed Brown     ierr = PetscMalloc1(n_is,&pcbddc->ISForDofs);CHKERRQ(ierr);
1186d02579f5SStefano Zampini   }
11879c0446d6SStefano Zampini   for (i=0;i<n_is;i++) {
1188da1bb401SStefano Zampini     pcbddc->ISForDofs[i] = ISForDofs[i];
11899c0446d6SStefano Zampini   }
11909c0446d6SStefano Zampini   pcbddc->n_ISForDofs = n_is;
119163602bcaSStefano Zampini   if (n_is) pcbddc->user_provided_isfordofs = PETSC_TRUE;
119256282151SStefano Zampini   if (!isequal) pcbddc->recompute_topography = PETSC_TRUE;
11939c0446d6SStefano Zampini   PetscFunctionReturn(0);
11949c0446d6SStefano Zampini }
11951e6b0712SBarry Smith 
11969c0446d6SStefano Zampini /*@
119763602bcaSStefano Zampini  PCBDDCSetDofsSplitting - Set index sets defining fields of the global matrix
11989c0446d6SStefano Zampini 
119963602bcaSStefano Zampini    Collective
12009c0446d6SStefano Zampini 
12019c0446d6SStefano Zampini    Input Parameters:
12029c0446d6SStefano Zampini +  pc - the preconditioning context
12030f202f7eSStefano Zampini .  n_is - number of index sets defining the fields
12040f202f7eSStefano Zampini -  ISForDofs - array of IS describing the fields in global ordering
12059c0446d6SStefano Zampini 
12069c0446d6SStefano Zampini    Level: intermediate
12079c0446d6SStefano Zampini 
12080f202f7eSStefano Zampini    Notes:
12090f202f7eSStefano Zampini      Any process can list any global node. Not all nodes need to be listed: unlisted nodes will belong to the complement field.
12109c0446d6SStefano Zampini 
12119c0446d6SStefano Zampini .seealso: PCBDDC
12129c0446d6SStefano Zampini @*/
12139c0446d6SStefano Zampini PetscErrorCode PCBDDCSetDofsSplitting(PC pc,PetscInt n_is, IS ISForDofs[])
12149c0446d6SStefano Zampini {
12152b510759SStefano Zampini   PetscInt       i;
12169c0446d6SStefano Zampini   PetscErrorCode ierr;
12179c0446d6SStefano Zampini 
12189c0446d6SStefano Zampini   PetscFunctionBegin;
12199c0446d6SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
122063602bcaSStefano Zampini   PetscValidLogicalCollectiveInt(pc,n_is,2);
12212b510759SStefano Zampini   for (i=0;i<n_is;i++) {
122263602bcaSStefano Zampini     PetscValidHeaderSpecific(ISForDofs[i],IS_CLASSID,3);
1223a011d5a7Sstefano_zampini     PetscCheckSameComm(pc,1,ISForDofs[i],3);
12242b510759SStefano Zampini   }
12259c0446d6SStefano Zampini   ierr = PetscTryMethod(pc,"PCBDDCSetDofsSplitting_C",(PC,PetscInt,IS[]),(pc,n_is,ISForDofs));CHKERRQ(ierr);
12269c0446d6SStefano Zampini   PetscFunctionReturn(0);
12279c0446d6SStefano Zampini }
1228906d46d4SStefano Zampini 
1229534831adSStefano Zampini /*
1230534831adSStefano Zampini    PCPreSolve_BDDC - Changes the right hand side and (if necessary) the initial
1231534831adSStefano Zampini                      guess if a transformation of basis approach has been selected.
12329c0446d6SStefano Zampini 
1233534831adSStefano Zampini    Input Parameter:
1234534831adSStefano Zampini +  pc - the preconditioner contex
1235534831adSStefano Zampini 
1236534831adSStefano Zampini    Application Interface Routine: PCPreSolve()
1237534831adSStefano Zampini 
1238534831adSStefano Zampini    Notes:
1239534831adSStefano Zampini      The interface routine PCPreSolve() is not usually called directly by
1240534831adSStefano Zampini    the user, but instead is called by KSPSolve().
1241534831adSStefano Zampini */
1242534831adSStefano Zampini static PetscErrorCode PCPreSolve_BDDC(PC pc, KSP ksp, Vec rhs, Vec x)
1243534831adSStefano Zampini {
1244534831adSStefano Zampini   PetscErrorCode ierr;
1245534831adSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
1246534831adSStefano Zampini   PC_IS          *pcis = (PC_IS*)(pc->data);
12473972b0daSStefano Zampini   Vec            used_vec;
124827b6a85dSStefano Zampini   PetscBool      save_rhs = PETSC_TRUE, benign_correction_computed;
1249534831adSStefano Zampini 
1250534831adSStefano Zampini   PetscFunctionBegin;
12511f4df5f7SStefano Zampini   /* if we are working with CG, one dirichlet solve can be avoided during Krylov iterations */
125285c4d303SStefano Zampini   if (ksp) {
12531f4df5f7SStefano Zampini     PetscBool iscg, isgroppcg, ispipecg, ispipecgrr;
125485c4d303SStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)ksp,KSPCG,&iscg);CHKERRQ(ierr);
125527b6a85dSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)ksp,KSPGROPPCG,&isgroppcg);CHKERRQ(ierr);
125627b6a85dSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)ksp,KSPPIPECG,&ispipecg);CHKERRQ(ierr);
1257f94e96cbSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)ksp,KSPPIPECGRR,&ispipecgrr);CHKERRQ(ierr);
12581f4df5f7SStefano Zampini     if (pcbddc->benign_apply_coarse_only || pcbddc->switch_static || (!iscg && !isgroppcg && !ispipecg && !ispipecgrr)) {
125985c4d303SStefano Zampini       ierr = PCBDDCSetUseExactDirichlet(pc,PETSC_FALSE);CHKERRQ(ierr);
126085c4d303SStefano Zampini     }
126185c4d303SStefano Zampini   }
1262fc17d649SStefano Zampini   if (pcbddc->benign_apply_coarse_only || pcbddc->switch_static) {
1263fc17d649SStefano Zampini     ierr = PCBDDCSetUseExactDirichlet(pc,PETSC_FALSE);CHKERRQ(ierr);
1264fc17d649SStefano Zampini   }
12651f4df5f7SStefano Zampini 
126685c4d303SStefano Zampini   /* Creates parallel work vectors used in presolve */
126762a6ff1dSStefano Zampini   if (!pcbddc->original_rhs) {
126862a6ff1dSStefano Zampini     ierr = VecDuplicate(pcis->vec1_global,&pcbddc->original_rhs);CHKERRQ(ierr);
126962a6ff1dSStefano Zampini   }
127062a6ff1dSStefano Zampini   if (!pcbddc->temp_solution) {
127162a6ff1dSStefano Zampini     ierr = VecDuplicate(pcis->vec1_global,&pcbddc->temp_solution);CHKERRQ(ierr);
127262a6ff1dSStefano Zampini   }
12738d00608fSStefano Zampini 
127427b6a85dSStefano Zampini   pcbddc->temp_solution_used = PETSC_FALSE;
12753972b0daSStefano Zampini   if (x) {
12763972b0daSStefano Zampini     ierr = PetscObjectReference((PetscObject)x);CHKERRQ(ierr);
12773972b0daSStefano Zampini     used_vec = x;
12788d00608fSStefano Zampini   } else { /* it can only happen when calling PCBDDCMatFETIDPGetRHS */
12793972b0daSStefano Zampini     ierr = PetscObjectReference((PetscObject)pcbddc->temp_solution);CHKERRQ(ierr);
12803972b0daSStefano Zampini     used_vec = pcbddc->temp_solution;
12813972b0daSStefano Zampini     ierr = VecSet(used_vec,0.0);CHKERRQ(ierr);
128227b6a85dSStefano Zampini     pcbddc->temp_solution_used = PETSC_TRUE;
1283266e20e9SStefano Zampini     ierr = VecCopy(rhs,pcbddc->original_rhs);CHKERRQ(ierr);
1284266e20e9SStefano Zampini     save_rhs = PETSC_FALSE;
1285266e20e9SStefano Zampini     pcbddc->eliminate_dirdofs = PETSC_TRUE;
12863972b0daSStefano Zampini   }
12878efcfb23SStefano Zampini 
12888efcfb23SStefano Zampini   /* hack into ksp data structure since PCPreSolve comes earlier than setting to zero the guess in src/ksp/ksp/interface/itfunc.c */
12893972b0daSStefano Zampini   if (ksp) {
1290a0cb1b98SStefano Zampini     /* store the flag for the initial guess since it will be restored back during PCPostSolve_BDDC */
12918efcfb23SStefano Zampini     ierr = KSPGetInitialGuessNonzero(ksp,&pcbddc->ksp_guess_nonzero);CHKERRQ(ierr);
12928efcfb23SStefano Zampini     if (!pcbddc->ksp_guess_nonzero) {
12933972b0daSStefano Zampini       ierr = VecSet(used_vec,0.0);CHKERRQ(ierr);
12943972b0daSStefano Zampini     }
12953972b0daSStefano Zampini   }
12963308cffdSStefano Zampini 
12978d00608fSStefano Zampini   pcbddc->rhs_change = PETSC_FALSE;
12983972b0daSStefano Zampini   /* Take into account zeroed rows -> change rhs and store solution removed */
129970c64980SStefano Zampini   if (rhs && pcbddc->eliminate_dirdofs) {
13003975b054SStefano Zampini     IS dirIS = NULL;
13013975b054SStefano Zampini 
1302a07ea27aSStefano Zampini     /* DirichletBoundariesLocal may not be consistent among neighbours; gets a dirichlet dofs IS from graph (may be cached) */
13033975b054SStefano Zampini     ierr = PCBDDCGraphGetDirichletDofs(pcbddc->mat_graph,&dirIS);CHKERRQ(ierr);
13043975b054SStefano Zampini     if (dirIS) {
1305906d46d4SStefano Zampini       Mat_IS            *matis = (Mat_IS*)pc->pmat->data;
1306785d1243SStefano Zampini       PetscInt          dirsize,i,*is_indices;
13072b095fd8SStefano Zampini       PetscScalar       *array_x;
13082b095fd8SStefano Zampini       const PetscScalar *array_diagonal;
1309785d1243SStefano Zampini 
13103972b0daSStefano Zampini       ierr = MatGetDiagonal(pc->pmat,pcis->vec1_global);CHKERRQ(ierr);
13113972b0daSStefano Zampini       ierr = VecPointwiseDivide(pcis->vec1_global,rhs,pcis->vec1_global);CHKERRQ(ierr);
1312e176bc59SStefano Zampini       ierr = VecScatterBegin(matis->rctx,pcis->vec1_global,pcis->vec2_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1313e176bc59SStefano Zampini       ierr = VecScatterEnd(matis->rctx,pcis->vec1_global,pcis->vec2_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1314e176bc59SStefano Zampini       ierr = VecScatterBegin(matis->rctx,used_vec,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1315e176bc59SStefano Zampini       ierr = VecScatterEnd(matis->rctx,used_vec,pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
131682ba6b80SStefano Zampini       ierr = ISGetLocalSize(dirIS,&dirsize);CHKERRQ(ierr);
13173972b0daSStefano Zampini       ierr = VecGetArray(pcis->vec1_N,&array_x);CHKERRQ(ierr);
13182b095fd8SStefano Zampini       ierr = VecGetArrayRead(pcis->vec2_N,&array_diagonal);CHKERRQ(ierr);
13193972b0daSStefano Zampini       ierr = ISGetIndices(dirIS,(const PetscInt**)&is_indices);CHKERRQ(ierr);
13202fa5cd67SKarl Rupp       for (i=0; i<dirsize; i++) array_x[is_indices[i]] = array_diagonal[is_indices[i]];
13213972b0daSStefano Zampini       ierr = ISRestoreIndices(dirIS,(const PetscInt**)&is_indices);CHKERRQ(ierr);
13222b095fd8SStefano Zampini       ierr = VecRestoreArrayRead(pcis->vec2_N,&array_diagonal);CHKERRQ(ierr);
13233972b0daSStefano Zampini       ierr = VecRestoreArray(pcis->vec1_N,&array_x);CHKERRQ(ierr);
1324e176bc59SStefano Zampini       ierr = VecScatterBegin(matis->rctx,pcis->vec1_N,used_vec,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1325e176bc59SStefano Zampini       ierr = VecScatterEnd(matis->rctx,pcis->vec1_N,used_vec,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
13268d00608fSStefano Zampini       pcbddc->rhs_change = PETSC_TRUE;
13271b968477SStefano Zampini       ierr = ISDestroy(&dirIS);CHKERRQ(ierr);
13288efcfb23SStefano Zampini     }
1329a07ea27aSStefano Zampini   }
1330b76ba322SStefano Zampini 
13318efcfb23SStefano Zampini   /* remove the computed solution or the initial guess from the rhs */
13328d00608fSStefano Zampini   if (pcbddc->rhs_change || (ksp && pcbddc->ksp_guess_nonzero) ) {
133327b6a85dSStefano Zampini     /* save the original rhs */
133427b6a85dSStefano Zampini     if (save_rhs) {
133527b6a85dSStefano Zampini       ierr = VecSwap(rhs,pcbddc->original_rhs);CHKERRQ(ierr);
133627b6a85dSStefano Zampini       save_rhs = PETSC_FALSE;
13378d00608fSStefano Zampini     }
13388d00608fSStefano Zampini     pcbddc->rhs_change = PETSC_TRUE;
13393972b0daSStefano Zampini     ierr = VecScale(used_vec,-1.0);CHKERRQ(ierr);
134027b6a85dSStefano Zampini     ierr = MatMultAdd(pc->mat,used_vec,pcbddc->original_rhs,rhs);CHKERRQ(ierr);
13413972b0daSStefano Zampini     ierr = VecScale(used_vec,-1.0);CHKERRQ(ierr);
13428efcfb23SStefano Zampini     ierr = VecCopy(used_vec,pcbddc->temp_solution);CHKERRQ(ierr);
134327b6a85dSStefano Zampini     pcbddc->temp_solution_used = PETSC_TRUE;
13447acc28cbSStefano Zampini     if (ksp) {
13457acc28cbSStefano Zampini       ierr = KSPSetInitialGuessNonzero(ksp,PETSC_FALSE);CHKERRQ(ierr);
13467acc28cbSStefano Zampini     }
13473308cffdSStefano Zampini   }
13488efcfb23SStefano Zampini   ierr = VecDestroy(&used_vec);CHKERRQ(ierr);
1349b76ba322SStefano Zampini 
1350fc17d649SStefano Zampini   /* compute initial vector in benign space if needed
135127b6a85dSStefano Zampini      and remove non-benign solution from the rhs */
135227b6a85dSStefano Zampini   benign_correction_computed = PETSC_FALSE;
1353c69e9cc1SStefano Zampini   if (rhs && pcbddc->benign_compute_correction && (pcbddc->benign_have_null || pcbddc->benign_apply_coarse_only)) {
13541f4df5f7SStefano Zampini     /* compute u^*_h using ideas similar to those in Xuemin Tu's PhD thesis (see Section 4.8.1)
13551f4df5f7SStefano Zampini        Recursively apply BDDC in the multilevel case */
13560369aaf7SStefano Zampini     if (!pcbddc->benign_vec) {
13570369aaf7SStefano Zampini       ierr = VecDuplicate(rhs,&pcbddc->benign_vec);CHKERRQ(ierr);
13580369aaf7SStefano Zampini     }
1359c69e9cc1SStefano Zampini     /* keep applying coarse solver unless we no longer have benign subdomains */
1360c69e9cc1SStefano Zampini     pcbddc->benign_apply_coarse_only = pcbddc->benign_have_null ? PETSC_TRUE : PETSC_FALSE;
136127b6a85dSStefano Zampini     if (!pcbddc->benign_skip_correction) {
13621dd7afcfSStefano Zampini       ierr = PCApply_BDDC(pc,rhs,pcbddc->benign_vec);CHKERRQ(ierr);
13633bca92a6SStefano Zampini       benign_correction_computed = PETSC_TRUE;
13641f4df5f7SStefano Zampini       if (pcbddc->temp_solution_used) {
13651f4df5f7SStefano Zampini         ierr = VecAXPY(pcbddc->temp_solution,1.0,pcbddc->benign_vec);CHKERRQ(ierr);
13661f4df5f7SStefano Zampini       }
13671f4df5f7SStefano Zampini       ierr = VecScale(pcbddc->benign_vec,-1.0);CHKERRQ(ierr);
136827b6a85dSStefano Zampini       /* store the original rhs if not done earlier */
136927b6a85dSStefano Zampini       if (save_rhs) {
137027b6a85dSStefano Zampini         ierr = VecSwap(rhs,pcbddc->original_rhs);CHKERRQ(ierr);
137192e3dcfbSStefano Zampini       }
137227b6a85dSStefano Zampini       if (pcbddc->rhs_change) {
13730369aaf7SStefano Zampini         ierr = MatMultAdd(pc->mat,pcbddc->benign_vec,rhs,rhs);CHKERRQ(ierr);
137427b6a85dSStefano Zampini       } else {
137527b6a85dSStefano Zampini         ierr = MatMultAdd(pc->mat,pcbddc->benign_vec,pcbddc->original_rhs,rhs);CHKERRQ(ierr);
137627b6a85dSStefano Zampini       }
13770369aaf7SStefano Zampini       pcbddc->rhs_change = PETSC_TRUE;
137827b6a85dSStefano Zampini     }
137927b6a85dSStefano Zampini     pcbddc->benign_apply_coarse_only = PETSC_FALSE;
13800369aaf7SStefano Zampini   }
13812d4c4fecSStefano Zampini 
13822d4c4fecSStefano Zampini   /* dbg output */
1383a198735bSStefano Zampini   if (pcbddc->dbg_flag && benign_correction_computed) {
13841f4df5f7SStefano Zampini     Vec v;
1385c69e9cc1SStefano Zampini 
13861f4df5f7SStefano Zampini     ierr = VecDuplicate(pcis->vec1_global,&v);CHKERRQ(ierr);
1387c69e9cc1SStefano Zampini     if (pcbddc->ChangeOfBasisMatrix) {
13881f4df5f7SStefano Zampini       ierr = MatMultTranspose(pcbddc->ChangeOfBasisMatrix,rhs,v);CHKERRQ(ierr);
1389c69e9cc1SStefano Zampini     } else {
1390c69e9cc1SStefano Zampini       ierr = VecCopy(rhs,v);CHKERRQ(ierr);
1391c69e9cc1SStefano Zampini     }
13921f4df5f7SStefano Zampini     ierr = PCBDDCBenignGetOrSetP0(pc,v,PETSC_TRUE);CHKERRQ(ierr);
1393e0fe2d75SToby Isaac     ierr = PetscViewerASCIIPrintf(pcbddc->dbg_viewer,"LEVEL %D: is the correction benign?\n",pcbddc->current_level);CHKERRQ(ierr);
1394c69e9cc1SStefano Zampini     ierr = PetscScalarView(pcbddc->benign_n,pcbddc->benign_p0,pcbddc->dbg_viewer);CHKERRQ(ierr);
1395c69e9cc1SStefano Zampini     ierr = PetscViewerFlush(pcbddc->dbg_viewer);CHKERRQ(ierr);
13961f4df5f7SStefano Zampini     ierr = VecDestroy(&v);CHKERRQ(ierr);
13971f4df5f7SStefano Zampini   }
13980369aaf7SStefano Zampini 
13990369aaf7SStefano Zampini   /* set initial guess if using PCG */
14008ae0ca82SStefano Zampini   pcbddc->exact_dirichlet_trick_app = PETSC_FALSE;
14010369aaf7SStefano Zampini   if (x && pcbddc->use_exact_dirichlet_trick) {
14020369aaf7SStefano Zampini     ierr = VecSet(x,0.0);CHKERRQ(ierr);
14031dd7afcfSStefano Zampini     if (pcbddc->ChangeOfBasisMatrix && pcbddc->change_interior) {
140427b6a85dSStefano Zampini       if (benign_correction_computed) { /* we have already saved the changed rhs */
14051dd7afcfSStefano Zampini         ierr = VecLockPop(pcis->vec1_global);CHKERRQ(ierr);
14061dd7afcfSStefano Zampini       } else {
14071dd7afcfSStefano Zampini         ierr = MatMultTranspose(pcbddc->ChangeOfBasisMatrix,rhs,pcis->vec1_global);CHKERRQ(ierr);
14081dd7afcfSStefano Zampini       }
14091dd7afcfSStefano Zampini       ierr = VecScatterBegin(pcis->global_to_D,pcis->vec1_global,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
14101dd7afcfSStefano Zampini       ierr = VecScatterEnd(pcis->global_to_D,pcis->vec1_global,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
14111dd7afcfSStefano Zampini     } else {
14120369aaf7SStefano Zampini       ierr = VecScatterBegin(pcis->global_to_D,rhs,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
14130369aaf7SStefano Zampini       ierr = VecScatterEnd(pcis->global_to_D,rhs,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
14141dd7afcfSStefano Zampini     }
14150369aaf7SStefano Zampini     ierr = KSPSolve(pcbddc->ksp_D,pcis->vec1_D,pcis->vec2_D);CHKERRQ(ierr);
14161dd7afcfSStefano Zampini     if (pcbddc->ChangeOfBasisMatrix && pcbddc->change_interior) {
14171dd7afcfSStefano Zampini       ierr = VecSet(pcis->vec1_global,0.);CHKERRQ(ierr);
14181dd7afcfSStefano Zampini       ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,pcis->vec1_global,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
14191dd7afcfSStefano Zampini       ierr = VecScatterEnd(pcis->global_to_D,pcis->vec2_D,pcis->vec1_global,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
14201dd7afcfSStefano Zampini       ierr = MatMult(pcbddc->ChangeOfBasisMatrix,pcis->vec1_global,x);CHKERRQ(ierr);
14211dd7afcfSStefano Zampini     } else {
14220369aaf7SStefano Zampini       ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,x,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
14230369aaf7SStefano Zampini       ierr = VecScatterEnd(pcis->global_to_D,pcis->vec2_D,x,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
14241dd7afcfSStefano Zampini     }
14250369aaf7SStefano Zampini     if (ksp) {
14260369aaf7SStefano Zampini       ierr = KSPSetInitialGuessNonzero(ksp,PETSC_TRUE);CHKERRQ(ierr);
14270369aaf7SStefano Zampini     }
14288ae0ca82SStefano Zampini     pcbddc->exact_dirichlet_trick_app = PETSC_TRUE;
1429266e20e9SStefano Zampini   } else if (pcbddc->ChangeOfBasisMatrix && pcbddc->change_interior && benign_correction_computed && pcbddc->use_exact_dirichlet_trick) {
1430266e20e9SStefano Zampini     ierr = VecLockPop(pcis->vec1_global);CHKERRQ(ierr);
14310369aaf7SStefano Zampini   }
1432534831adSStefano Zampini   PetscFunctionReturn(0);
1433534831adSStefano Zampini }
1434906d46d4SStefano Zampini 
1435534831adSStefano Zampini /*
1436534831adSStefano Zampini    PCPostSolve_BDDC - Changes the computed solution if a transformation of basis
1437534831adSStefano Zampini                      approach has been selected. Also, restores rhs to its original state.
1438534831adSStefano Zampini 
1439534831adSStefano Zampini    Input Parameter:
1440534831adSStefano Zampini +  pc - the preconditioner contex
1441534831adSStefano Zampini 
1442534831adSStefano Zampini    Application Interface Routine: PCPostSolve()
1443534831adSStefano Zampini 
1444534831adSStefano Zampini    Notes:
1445534831adSStefano Zampini      The interface routine PCPostSolve() is not usually called directly by
1446534831adSStefano Zampini      the user, but instead is called by KSPSolve().
1447534831adSStefano Zampini */
1448534831adSStefano Zampini static PetscErrorCode PCPostSolve_BDDC(PC pc, KSP ksp, Vec rhs, Vec x)
1449534831adSStefano Zampini {
1450534831adSStefano Zampini   PetscErrorCode ierr;
1451534831adSStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
1452534831adSStefano Zampini 
1453534831adSStefano Zampini   PetscFunctionBegin;
14543972b0daSStefano Zampini   /* add solution removed in presolve */
14556bcfc461SStefano Zampini   if (x && pcbddc->rhs_change) {
145627b6a85dSStefano Zampini     if (pcbddc->temp_solution_used) {
14573425bc38SStefano Zampini       ierr = VecAXPY(x,1.0,pcbddc->temp_solution);CHKERRQ(ierr);
1458af140850Sstefano_zampini     } else if (pcbddc->benign_compute_correction && pcbddc->benign_vec) {
145927b6a85dSStefano Zampini       ierr = VecAXPY(x,-1.0,pcbddc->benign_vec);CHKERRQ(ierr);
14603425bc38SStefano Zampini     }
1461af140850Sstefano_zampini     /* restore to original state (not for FETI-DP) */
1462af140850Sstefano_zampini     if (ksp) pcbddc->temp_solution_used = PETSC_FALSE;
146327b6a85dSStefano Zampini   }
146427b6a85dSStefano Zampini 
1465266e20e9SStefano Zampini   /* restore rhs to its original state (not needed for FETI-DP) */
14668d00608fSStefano Zampini   if (rhs && pcbddc->rhs_change) {
146727b6a85dSStefano Zampini     ierr = VecSwap(rhs,pcbddc->original_rhs);CHKERRQ(ierr);
14688d00608fSStefano Zampini     pcbddc->rhs_change = PETSC_FALSE;
1469af140850Sstefano_zampini   }
14708efcfb23SStefano Zampini   /* restore ksp guess state */
14718efcfb23SStefano Zampini   if (ksp) {
14728efcfb23SStefano Zampini     ierr = KSPSetInitialGuessNonzero(ksp,pcbddc->ksp_guess_nonzero);CHKERRQ(ierr);
14738ae0ca82SStefano Zampini     /* reset flag for exact dirichlet trick */
14748ae0ca82SStefano Zampini     pcbddc->exact_dirichlet_trick_app = PETSC_FALSE;
1475af140850Sstefano_zampini   }
1476534831adSStefano Zampini   PetscFunctionReturn(0);
1477534831adSStefano Zampini }
1478af140850Sstefano_zampini 
14790c7d97c5SJed Brown /*
14800c7d97c5SJed Brown    PCSetUp_BDDC - Prepares for the use of the BDDC preconditioner
14810c7d97c5SJed Brown                   by setting data structures and options.
14820c7d97c5SJed Brown 
14830c7d97c5SJed Brown    Input Parameter:
148453cdbc3dSStefano Zampini +  pc - the preconditioner context
14850c7d97c5SJed Brown 
14860c7d97c5SJed Brown    Application Interface Routine: PCSetUp()
14870c7d97c5SJed Brown 
14880c7d97c5SJed Brown    Notes:
14890c7d97c5SJed Brown      The interface routine PCSetUp() is not usually called directly by
14900c7d97c5SJed Brown      the user, but instead is called by PCApply() if necessary.
14910c7d97c5SJed Brown */
149253cdbc3dSStefano Zampini PetscErrorCode PCSetUp_BDDC(PC pc)
14930c7d97c5SJed Brown {
14940c7d97c5SJed Brown   PC_BDDC*        pcbddc = (PC_BDDC*)pc->data;
1495c703fcc7SStefano Zampini   PCBDDCSubSchurs sub_schurs;
14965e8657edSStefano Zampini   Mat_IS*         matis;
149708122e43SStefano Zampini   MatNullSpace    nearnullspace;
149835509ce9Sstefano_zampini   Mat             lA;
149935509ce9Sstefano_zampini   IS              lP,zerodiag = NULL;
150091e8d312SStefano Zampini   PetscInt        nrows,ncols;
150186bfa4cfSStefano Zampini   PetscMPIInt     size;
1502c703fcc7SStefano Zampini   PetscBool       computesubschurs;
15038de1fae6SStefano Zampini   PetscBool       computeconstraintsmatrix;
15045e8657edSStefano Zampini   PetscBool       new_nearnullspace_provided,ismatis;
1505c703fcc7SStefano Zampini   PetscErrorCode  ierr;
15060c7d97c5SJed Brown 
15070c7d97c5SJed Brown   PetscFunctionBegin;
15085e8657edSStefano Zampini   ierr = PetscObjectTypeCompare((PetscObject)pc->pmat,MATIS,&ismatis);CHKERRQ(ierr);
15096c4ed002SBarry Smith   if (!ismatis) SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_ARG_WRONG,"PCBDDC preconditioner requires matrix of type MATIS");
151091e8d312SStefano Zampini   ierr = MatGetSize(pc->pmat,&nrows,&ncols);CHKERRQ(ierr);
15116c4ed002SBarry Smith   if (nrows != ncols) SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"PCBDDC preconditioner requires a square preconditioning matrix");
151286bfa4cfSStefano Zampini   ierr = MPI_Comm_size(PetscObjectComm((PetscObject)pc),&size);CHKERRQ(ierr);
151386bfa4cfSStefano Zampini 
15145e8657edSStefano Zampini   matis = (Mat_IS*)pc->pmat->data;
1515f4ddd8eeSStefano Zampini   /* the following lines of code should be replaced by a better logic between PCIS, PCNN, PCBDDC and other future nonoverlapping preconditioners */
15163b03a366Sstefano_zampini   /* For BDDC we need to define a local "Neumann" problem different to that defined in PCISSetup
151771582508SStefano Zampini      Also, BDDC builds its own KSP for the Dirichlet problem */
1518a485753aSstefano_zampini   if (!pc->setupcalled || pc->flag == DIFFERENT_NONZERO_PATTERN) pcbddc->recompute_topography = PETSC_TRUE;
1519c83e1ba7SStefano Zampini   if (pcbddc->recompute_topography) {
1520c83e1ba7SStefano Zampini     pcbddc->graphanalyzed    = PETSC_FALSE;
1521c83e1ba7SStefano Zampini     computeconstraintsmatrix = PETSC_TRUE;
1522c83e1ba7SStefano Zampini   } else {
15238de1fae6SStefano Zampini     computeconstraintsmatrix = PETSC_FALSE;
1524c83e1ba7SStefano Zampini   }
1525b087196eSStefano Zampini 
1526b087196eSStefano Zampini   /* check parameters' compatibility */
1527b7ab4a40SStefano Zampini   if (!pcbddc->use_deluxe_scaling) pcbddc->deluxe_zerorows = PETSC_FALSE;
1528bd2a564bSStefano Zampini   pcbddc->adaptive_selection   = (PetscBool)(pcbddc->adaptive_threshold[0] != 0.0 || pcbddc->adaptive_threshold[1] != 0.0);
152986bfa4cfSStefano Zampini   pcbddc->use_deluxe_scaling   = (PetscBool)(pcbddc->use_deluxe_scaling && size > 1);
153086bfa4cfSStefano Zampini   pcbddc->adaptive_selection   = (PetscBool)(pcbddc->adaptive_selection && size > 1);
1531bf3a8328SStefano Zampini   pcbddc->adaptive_userdefined = (PetscBool)(pcbddc->adaptive_selection && pcbddc->adaptive_userdefined);
1532862806e4SStefano Zampini   if (pcbddc->adaptive_selection) pcbddc->use_faces = PETSC_TRUE;
1533862806e4SStefano Zampini 
15345a95e1ceSStefano Zampini   computesubschurs = (PetscBool)(pcbddc->adaptive_selection || pcbddc->use_deluxe_scaling);
153516909a7fSStefano Zampini   if (pcbddc->switch_static) {
153616909a7fSStefano Zampini     PetscBool ismatis;
1537d9869140SStefano Zampini 
153816909a7fSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)pc->mat,MATIS,&ismatis);CHKERRQ(ierr);
153916909a7fSStefano Zampini     if (!ismatis) SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"When the static switch is one, the iteration matrix should be of type MATIS");
154016909a7fSStefano Zampini   }
154116909a7fSStefano Zampini 
154271582508SStefano Zampini   /* activate all connected components if the netflux has been requested */
1543bb05f991SStefano Zampini   if (pcbddc->compute_nonetflux) {
1544bb05f991SStefano Zampini     pcbddc->use_vertices = PETSC_TRUE;
1545bb05f991SStefano Zampini     pcbddc->use_edges    = PETSC_TRUE;
1546bb05f991SStefano Zampini     pcbddc->use_faces    = PETSC_TRUE;
1547bb05f991SStefano Zampini   }
1548bb05f991SStefano Zampini 
1549f4ddd8eeSStefano Zampini   /* Get stdout for dbg */
155070cf5478SStefano Zampini   if (pcbddc->dbg_flag) {
155170cf5478SStefano Zampini     if (!pcbddc->dbg_viewer) {
155258a03d70SStefano Zampini       pcbddc->dbg_viewer = PETSC_VIEWER_STDOUT_(PetscObjectComm((PetscObject)pc));
1553f4ddd8eeSStefano Zampini     }
1554d9869140SStefano Zampini     ierr = PetscViewerASCIIPushSynchronized(pcbddc->dbg_viewer);CHKERRQ(ierr);
155558a03d70SStefano Zampini     ierr = PetscViewerASCIIAddTab(pcbddc->dbg_viewer,2*pcbddc->current_level);CHKERRQ(ierr);
1556f4ddd8eeSStefano Zampini   }
1557f4ddd8eeSStefano Zampini 
1558c703fcc7SStefano Zampini   /* process topology information */
155943371fb9SStefano Zampini   ierr = PetscLogEventBegin(PC_BDDC_Topology[pcbddc->current_level],pc,0,0,0);CHKERRQ(ierr);
156071582508SStefano Zampini   if (pcbddc->recompute_topography) {
156171582508SStefano Zampini     ierr = PCBDDCComputeLocalTopologyInfo(pc);CHKERRQ(ierr);
1562c703fcc7SStefano Zampini     if (pcbddc->discretegradient) {
1563a13144ffSStefano Zampini       ierr = PCBDDCNedelecSupport(pc);CHKERRQ(ierr);
1564a13144ffSStefano Zampini     }
1565c703fcc7SStefano Zampini   }
1566a13144ffSStefano Zampini 
1567c703fcc7SStefano Zampini   /* change basis if requested by the user */
15685e8657edSStefano Zampini   if (pcbddc->user_ChangeOfBasisMatrix) {
15695e8657edSStefano Zampini     /* use_change_of_basis flag is used to automatically compute a change of basis from constraints */
15705e8657edSStefano Zampini     pcbddc->use_change_of_basis = PETSC_FALSE;
15715e8657edSStefano Zampini     ierr = PCBDDCComputeLocalMatrix(pc,pcbddc->user_ChangeOfBasisMatrix);CHKERRQ(ierr);
15725e8657edSStefano Zampini   } else {
1573b96c3477SStefano Zampini     ierr = MatDestroy(&pcbddc->local_mat);CHKERRQ(ierr);
15745e8657edSStefano Zampini     ierr = PetscObjectReference((PetscObject)matis->A);CHKERRQ(ierr);
15755e8657edSStefano Zampini     pcbddc->local_mat = matis->A;
1576d16cbb6bSStefano Zampini   }
1577d16cbb6bSStefano Zampini 
15784f1b2e48SStefano Zampini   /*
1579c703fcc7SStefano Zampini      Compute change of basis on local pressures (aka zerodiag dofs) with the benign trick
15804f1b2e48SStefano Zampini      This should come earlier then PCISSetUp for extracting the correct subdomain matrices
15814f1b2e48SStefano Zampini   */
15821dd7afcfSStefano Zampini   ierr = PCBDDCBenignShellMat(pc,PETSC_TRUE);CHKERRQ(ierr);
1583d16cbb6bSStefano Zampini   if (pcbddc->benign_saddle_point) {
15849f47a83aSStefano Zampini     PC_IS* pcis = (PC_IS*)pc->data;
15859f47a83aSStefano Zampini 
158605b28244SStefano Zampini     if (pcbddc->user_ChangeOfBasisMatrix || pcbddc->use_change_of_basis || !computesubschurs) pcbddc->benign_change_explicit = PETSC_TRUE;
1587669cc0f4SStefano Zampini     /* detect local saddle point and change the basis in pcbddc->local_mat (TODO: reuse case) */
1588339f8db1SStefano Zampini     ierr = PCBDDCBenignDetectSaddlePoint(pc,&zerodiag);CHKERRQ(ierr);
1589a3df083aSStefano Zampini     /* pop B0 mat from local mat */
1590c263805aSStefano Zampini     ierr = PCBDDCBenignPopOrPushB0(pc,PETSC_TRUE);CHKERRQ(ierr);
15911dd7afcfSStefano Zampini     /* give pcis a hint to not reuse submatrices during PCISCreate */
15921dd7afcfSStefano Zampini     if (pc->flag == SAME_NONZERO_PATTERN && pcis->reusesubmatrices == PETSC_TRUE) {
15931dd7afcfSStefano Zampini       if (pcbddc->benign_n && (pcbddc->benign_change_explicit || pcbddc->dbg_flag)) {
15941dd7afcfSStefano Zampini         pcis->reusesubmatrices = PETSC_FALSE;
15951dd7afcfSStefano Zampini       } else {
1596a3df083aSStefano Zampini         pcis->reusesubmatrices = PETSC_TRUE;
15971dd7afcfSStefano Zampini       }
1598a3df083aSStefano Zampini     } else {
15999f47a83aSStefano Zampini       pcis->reusesubmatrices = PETSC_FALSE;
1600674ae819SStefano Zampini     }
1601a3df083aSStefano Zampini   }
160227b6a85dSStefano Zampini 
16038037d520SStefano Zampini   /* propagate relevant information */
160406a4e24aSStefano Zampini   if (matis->A->symmetric_set) {
160506a4e24aSStefano Zampini     ierr = MatSetOption(pcbddc->local_mat,MAT_SYMMETRIC,matis->A->symmetric);CHKERRQ(ierr);
160606a4e24aSStefano Zampini   }
160706a4e24aSStefano Zampini   if (matis->A->spd_set) {
160806a4e24aSStefano Zampini     ierr = MatSetOption(pcbddc->local_mat,MAT_SPD,matis->A->spd);CHKERRQ(ierr);
160906a4e24aSStefano Zampini   }
1610e496cd5dSStefano Zampini 
16115e8657edSStefano Zampini   /* Set up all the "iterative substructuring" common block without computing solvers */
16125e8657edSStefano Zampini   {
16135e8657edSStefano Zampini     Mat temp_mat;
16145e8657edSStefano Zampini 
16155e8657edSStefano Zampini     temp_mat = matis->A;
16165e8657edSStefano Zampini     matis->A = pcbddc->local_mat;
1617d9869140SStefano Zampini     ierr = PCISSetUp(pc,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr);
16185e8657edSStefano Zampini     pcbddc->local_mat = matis->A;
16195e8657edSStefano Zampini     matis->A = temp_mat;
16205e8657edSStefano Zampini   }
1621684f6988SStefano Zampini 
162281d14e9dSStefano Zampini   /* Analyze interface */
162364ac59b8SStefano Zampini   if (!pcbddc->graphanalyzed) {
1624674ae819SStefano Zampini     ierr = PCBDDCAnalyzeInterface(pc);CHKERRQ(ierr);
16258de1fae6SStefano Zampini     computeconstraintsmatrix = PETSC_TRUE;
1626345ecf6cSStefano Zampini     if (pcbddc->adaptive_selection && !pcbddc->use_deluxe_scaling && !pcbddc->mat_graph->twodim) {
16274247aa23Sstefano_zampini       SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Cannot compute the adaptive primal space for a problem with 3D edges without deluxe scaling");
1628345ecf6cSStefano Zampini     }
1629a198735bSStefano Zampini     if (pcbddc->compute_nonetflux) {
1630669cc0f4SStefano Zampini       MatNullSpace nnfnnsp;
1631669cc0f4SStefano Zampini 
163221ef3d20SStefano Zampini       if (!pcbddc->divudotp) SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"Missing divudotp operator");
16338ae0ca82SStefano Zampini       ierr = PCBDDCComputeNoNetFlux(pc->pmat,pcbddc->divudotp,pcbddc->divudotp_trans,pcbddc->divudotp_vl2l,pcbddc->mat_graph,&nnfnnsp);CHKERRQ(ierr);
163471582508SStefano Zampini       /* TODO what if a nearnullspace is already attached? */
16358037d520SStefano Zampini       if (nnfnnsp) {
1636669cc0f4SStefano Zampini         ierr = MatSetNearNullSpace(pc->pmat,nnfnnsp);CHKERRQ(ierr);
1637669cc0f4SStefano Zampini         ierr = MatNullSpaceDestroy(&nnfnnsp);CHKERRQ(ierr);
1638669cc0f4SStefano Zampini       }
1639674ae819SStefano Zampini     }
16408037d520SStefano Zampini   }
164143371fb9SStefano Zampini   ierr = PetscLogEventEnd(PC_BDDC_Topology[pcbddc->current_level],pc,0,0,0);CHKERRQ(ierr);
1642fb8d54d4SStefano Zampini 
16435408967cSStefano Zampini   /* check existence of a divergence free extension, i.e.
16445408967cSStefano Zampini      b(v_I,p_0) = 0 for all v_I (raise error if not).
16455408967cSStefano Zampini      Also, check that PCBDDCBenignGetOrSetP0 works */
1646ff1f7e73Sstefano_zampini   if (pcbddc->benign_saddle_point && pcbddc->dbg_flag > 1) {
16475408967cSStefano Zampini     ierr = PCBDDCBenignCheck(pc,zerodiag);CHKERRQ(ierr);
164809f581a4SStefano Zampini   }
16494f1b2e48SStefano Zampini   ierr = ISDestroy(&zerodiag);CHKERRQ(ierr);
165006f24817SStefano Zampini 
1651b96c3477SStefano Zampini   /* Setup local dirichlet solver ksp_D and sub_schurs solvers */
1652c703fcc7SStefano Zampini   if (computesubschurs && pcbddc->recompute_topography) {
165308122e43SStefano Zampini     ierr = PCBDDCInitSubSchurs(pc);CHKERRQ(ierr);
1654b1b3d7a2SStefano Zampini   }
16559d54b7f4SStefano Zampini   /* SetUp Scaling operator (scaling matrices could be needed in SubSchursSetUp)*/
16569d54b7f4SStefano Zampini   if (!pcbddc->use_deluxe_scaling) {
16579d54b7f4SStefano Zampini     ierr = PCBDDCScalingSetUp(pc);CHKERRQ(ierr);
16589d54b7f4SStefano Zampini   }
1659c703fcc7SStefano Zampini 
1660c703fcc7SStefano Zampini   /* finish setup solvers and do adaptive selection of constraints */
1661b334f244SStefano Zampini   sub_schurs = pcbddc->sub_schurs;
1662b334f244SStefano Zampini   if (sub_schurs && sub_schurs->schur_explicit) {
16632070dbb6SStefano Zampini     if (computesubschurs) {
166408122e43SStefano Zampini       ierr = PCBDDCSetUpSubSchurs(pc);CHKERRQ(ierr);
16652070dbb6SStefano Zampini     }
1666d5574798SStefano Zampini     ierr = PCBDDCSetUpLocalSolvers(pc,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr);
1667d5574798SStefano Zampini   } else {
1668d5574798SStefano Zampini     ierr = PCBDDCSetUpLocalSolvers(pc,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr);
16692070dbb6SStefano Zampini     if (computesubschurs) {
1670d5574798SStefano Zampini       ierr = PCBDDCSetUpSubSchurs(pc);CHKERRQ(ierr);
1671d5574798SStefano Zampini     }
16722070dbb6SStefano Zampini   }
167308122e43SStefano Zampini   if (pcbddc->adaptive_selection) {
167408122e43SStefano Zampini     ierr = PCBDDCAdaptiveSelection(pc);CHKERRQ(ierr);
16758de1fae6SStefano Zampini     computeconstraintsmatrix = PETSC_TRUE;
1676b7eb3628SStefano Zampini   }
1677684f6988SStefano Zampini 
1678f4ddd8eeSStefano Zampini   /* infer if NullSpace object attached to Mat via MatSetNearNullSpace has changed */
1679fb8d54d4SStefano Zampini   new_nearnullspace_provided = PETSC_FALSE;
1680f4ddd8eeSStefano Zampini   ierr = MatGetNearNullSpace(pc->pmat,&nearnullspace);CHKERRQ(ierr);
1681f4ddd8eeSStefano Zampini   if (pcbddc->onearnullspace) { /* already used nearnullspace */
1682f4ddd8eeSStefano Zampini     if (!nearnullspace) { /* near null space attached to mat has been destroyed */
1683f4ddd8eeSStefano Zampini       new_nearnullspace_provided = PETSC_TRUE;
1684f4ddd8eeSStefano Zampini     } else {
1685f4ddd8eeSStefano Zampini       /* determine if the two nullspaces are different (should be lightweight) */
1686f4ddd8eeSStefano Zampini       if (nearnullspace != pcbddc->onearnullspace) {
1687f4ddd8eeSStefano Zampini         new_nearnullspace_provided = PETSC_TRUE;
1688165b64e2SStefano Zampini       } else { /* maybe the user has changed the content of the nearnullspace so check vectors ObjectStateId */
1689f4ddd8eeSStefano Zampini         PetscInt         i;
1690165b64e2SStefano Zampini         const Vec        *nearnullvecs;
1691165b64e2SStefano Zampini         PetscObjectState state;
1692165b64e2SStefano Zampini         PetscInt         nnsp_size;
1693165b64e2SStefano Zampini         ierr = MatNullSpaceGetVecs(nearnullspace,NULL,&nnsp_size,&nearnullvecs);CHKERRQ(ierr);
1694f4ddd8eeSStefano Zampini         for (i=0;i<nnsp_size;i++) {
1695f4ddd8eeSStefano Zampini           ierr = PetscObjectStateGet((PetscObject)nearnullvecs[i],&state);CHKERRQ(ierr);
1696165b64e2SStefano Zampini           if (pcbddc->onearnullvecs_state[i] != state) {
1697f4ddd8eeSStefano Zampini             new_nearnullspace_provided = PETSC_TRUE;
1698f4ddd8eeSStefano Zampini             break;
1699f4ddd8eeSStefano Zampini           }
1700f4ddd8eeSStefano Zampini         }
1701f4ddd8eeSStefano Zampini       }
1702f4ddd8eeSStefano Zampini     }
1703f4ddd8eeSStefano Zampini   } else {
1704f4ddd8eeSStefano Zampini     if (!nearnullspace) { /* both nearnullspaces are null */
1705f4ddd8eeSStefano Zampini       new_nearnullspace_provided = PETSC_FALSE;
1706f4ddd8eeSStefano Zampini     } else { /* nearnullspace attached later */
1707f4ddd8eeSStefano Zampini       new_nearnullspace_provided = PETSC_TRUE;
1708f4ddd8eeSStefano Zampini     }
1709f4ddd8eeSStefano Zampini   }
1710f4ddd8eeSStefano Zampini 
1711f4ddd8eeSStefano Zampini   /* Setup constraints and related work vectors */
1712727cdba6SStefano Zampini   /* reset primal space flags */
171343371fb9SStefano Zampini   ierr = PetscLogEventBegin(PC_BDDC_LocalWork[pcbddc->current_level],pc,0,0,0);CHKERRQ(ierr);
1714f4ddd8eeSStefano Zampini   pcbddc->new_primal_space = PETSC_FALSE;
1715727cdba6SStefano Zampini   pcbddc->new_primal_space_local = PETSC_FALSE;
17168de1fae6SStefano Zampini   if (computeconstraintsmatrix || new_nearnullspace_provided) {
1717727cdba6SStefano Zampini     /* It also sets the primal space flags */
1718674ae819SStefano Zampini     ierr = PCBDDCConstraintsSetUp(pc);CHKERRQ(ierr);
17199543d0ffSStefano Zampini   }
1720e7b262bdSStefano Zampini   /* Allocate needed local vectors (which depends on quantities defined during ConstraintsSetUp) */
1721f4ddd8eeSStefano Zampini   ierr = PCBDDCSetUpLocalWorkVectors(pc);CHKERRQ(ierr);
17225e8657edSStefano Zampini 
17235e8657edSStefano Zampini   if (pcbddc->use_change_of_basis) {
17245e8657edSStefano Zampini     PC_IS *pcis = (PC_IS*)(pc->data);
17255e8657edSStefano Zampini 
17265e8657edSStefano Zampini     ierr = PCBDDCComputeLocalMatrix(pc,pcbddc->ChangeOfBasisMatrix);CHKERRQ(ierr);
17274f1b2e48SStefano Zampini     if (pcbddc->benign_change) {
17281dd7afcfSStefano Zampini       ierr = MatDestroy(&pcbddc->benign_B0);CHKERRQ(ierr);
1729c263805aSStefano Zampini       /* pop B0 from pcbddc->local_mat */
1730c263805aSStefano Zampini       ierr = PCBDDCBenignPopOrPushB0(pc,PETSC_TRUE);CHKERRQ(ierr);
1731c263805aSStefano Zampini     }
17325e8657edSStefano Zampini     /* get submatrices */
17335e8657edSStefano Zampini     ierr = MatDestroy(&pcis->A_IB);CHKERRQ(ierr);
17345e8657edSStefano Zampini     ierr = MatDestroy(&pcis->A_BI);CHKERRQ(ierr);
17355e8657edSStefano Zampini     ierr = MatDestroy(&pcis->A_BB);CHKERRQ(ierr);
17367dae84e0SHong Zhang     ierr = MatCreateSubMatrix(pcbddc->local_mat,pcis->is_B_local,pcis->is_B_local,MAT_INITIAL_MATRIX,&pcis->A_BB);CHKERRQ(ierr);
17377dae84e0SHong Zhang     ierr = MatCreateSubMatrix(pcbddc->local_mat,pcis->is_I_local,pcis->is_B_local,MAT_INITIAL_MATRIX,&pcis->A_IB);CHKERRQ(ierr);
17387dae84e0SHong Zhang     ierr = MatCreateSubMatrix(pcbddc->local_mat,pcis->is_B_local,pcis->is_I_local,MAT_INITIAL_MATRIX,&pcis->A_BI);CHKERRQ(ierr);
17393975b054SStefano Zampini     /* set flag in pcis to not reuse submatrices during PCISCreate */
17403975b054SStefano Zampini     pcis->reusesubmatrices = PETSC_FALSE;
17419c6a02ceSStefano Zampini   } else if (!pcbddc->user_ChangeOfBasisMatrix && !pcbddc->benign_change) {
1742b96c3477SStefano Zampini     ierr = MatDestroy(&pcbddc->local_mat);CHKERRQ(ierr);
17435e8657edSStefano Zampini     ierr = PetscObjectReference((PetscObject)matis->A);CHKERRQ(ierr);
17445e8657edSStefano Zampini     pcbddc->local_mat = matis->A;
17455e8657edSStefano Zampini   }
174635509ce9Sstefano_zampini 
174735509ce9Sstefano_zampini   /* interface pressure block row for B_C */
174835509ce9Sstefano_zampini   ierr = PetscObjectQuery((PetscObject)pc,"__KSPFETIDP_lP" ,(PetscObject*)&lP);CHKERRQ(ierr);
174935509ce9Sstefano_zampini   ierr = PetscObjectQuery((PetscObject)pc,"__KSPFETIDP_lA" ,(PetscObject*)&lA);CHKERRQ(ierr);
175035509ce9Sstefano_zampini   if (lA && lP) {
175135509ce9Sstefano_zampini     PC_IS*    pcis = (PC_IS*)pc->data;
175235509ce9Sstefano_zampini     Mat       B_BI,B_BB,Bt_BI,Bt_BB;
175335509ce9Sstefano_zampini     PetscBool issym;
175435509ce9Sstefano_zampini     ierr = MatIsSymmetric(lA,PETSC_SMALL,&issym);CHKERRQ(ierr);
17556cc1294bSstefano_zampini     if (issym) {
17567dae84e0SHong Zhang       ierr = MatCreateSubMatrix(lA,lP,pcis->is_I_local,MAT_INITIAL_MATRIX,&B_BI);CHKERRQ(ierr);
17577dae84e0SHong Zhang       ierr = MatCreateSubMatrix(lA,lP,pcis->is_B_local,MAT_INITIAL_MATRIX,&B_BB);CHKERRQ(ierr);
175835509ce9Sstefano_zampini       ierr = MatCreateTranspose(B_BI,&Bt_BI);CHKERRQ(ierr);
175935509ce9Sstefano_zampini       ierr = MatCreateTranspose(B_BB,&Bt_BB);CHKERRQ(ierr);
176035509ce9Sstefano_zampini     } else {
17617dae84e0SHong Zhang       ierr = MatCreateSubMatrix(lA,lP,pcis->is_I_local,MAT_INITIAL_MATRIX,&B_BI);CHKERRQ(ierr);
17627dae84e0SHong Zhang       ierr = MatCreateSubMatrix(lA,lP,pcis->is_B_local,MAT_INITIAL_MATRIX,&B_BB);CHKERRQ(ierr);
17637dae84e0SHong Zhang       ierr = MatCreateSubMatrix(lA,pcis->is_I_local,lP,MAT_INITIAL_MATRIX,&Bt_BI);CHKERRQ(ierr);
17647dae84e0SHong Zhang       ierr = MatCreateSubMatrix(lA,pcis->is_B_local,lP,MAT_INITIAL_MATRIX,&Bt_BB);CHKERRQ(ierr);
176535509ce9Sstefano_zampini     }
176635509ce9Sstefano_zampini     ierr = PetscObjectCompose((PetscObject)pc,"__KSPFETIDP_B_BI",(PetscObject)B_BI);CHKERRQ(ierr);
176735509ce9Sstefano_zampini     ierr = PetscObjectCompose((PetscObject)pc,"__KSPFETIDP_B_BB",(PetscObject)B_BB);CHKERRQ(ierr);
176835509ce9Sstefano_zampini     ierr = PetscObjectCompose((PetscObject)pc,"__KSPFETIDP_Bt_BI",(PetscObject)Bt_BI);CHKERRQ(ierr);
176935509ce9Sstefano_zampini     ierr = PetscObjectCompose((PetscObject)pc,"__KSPFETIDP_Bt_BB",(PetscObject)Bt_BB);CHKERRQ(ierr);
177035509ce9Sstefano_zampini     ierr = MatDestroy(&B_BI);CHKERRQ(ierr);
177135509ce9Sstefano_zampini     ierr = MatDestroy(&B_BB);CHKERRQ(ierr);
177235509ce9Sstefano_zampini     ierr = MatDestroy(&Bt_BI);CHKERRQ(ierr);
177335509ce9Sstefano_zampini     ierr = MatDestroy(&Bt_BB);CHKERRQ(ierr);
177435509ce9Sstefano_zampini   }
177543371fb9SStefano Zampini   ierr = PetscLogEventEnd(PC_BDDC_LocalWork[pcbddc->current_level],pc,0,0,0);CHKERRQ(ierr);
177635509ce9Sstefano_zampini 
1777b96c3477SStefano Zampini   /* SetUp coarse and local Neumann solvers */
177899cc7994SStefano Zampini   ierr = PCBDDCSetUpSolvers(pc);CHKERRQ(ierr);
1779b96c3477SStefano Zampini   /* SetUp Scaling operator */
17809d54b7f4SStefano Zampini   if (pcbddc->use_deluxe_scaling) {
1781674ae819SStefano Zampini     ierr = PCBDDCScalingSetUp(pc);CHKERRQ(ierr);
17820c7d97c5SJed Brown   }
1783c703fcc7SStefano Zampini 
17841dd7afcfSStefano Zampini   /* mark topography as done */
178556282151SStefano Zampini   pcbddc->recompute_topography = PETSC_FALSE;
17860369aaf7SStefano Zampini 
17871dd7afcfSStefano Zampini   /* wrap pcis->A_IB and pcis->A_BI if we did not change explicitly the variables on the pressures */
17881dd7afcfSStefano Zampini   ierr = PCBDDCBenignShellMat(pc,PETSC_FALSE);CHKERRQ(ierr);
17891dd7afcfSStefano Zampini 
179058a03d70SStefano Zampini   if (pcbddc->dbg_flag) {
179158a03d70SStefano Zampini     ierr = PetscViewerASCIISubtractTab(pcbddc->dbg_viewer,2*pcbddc->current_level);CHKERRQ(ierr);
1792d9869140SStefano Zampini     ierr = PetscViewerASCIIPopSynchronized(pcbddc->dbg_viewer);CHKERRQ(ierr);
17932b510759SStefano Zampini   }
17940c7d97c5SJed Brown   PetscFunctionReturn(0);
17950c7d97c5SJed Brown }
17960c7d97c5SJed Brown 
17970c7d97c5SJed Brown /*
179850efa1b5SStefano Zampini    PCApply_BDDC - Applies the BDDC operator to a vector.
17990c7d97c5SJed Brown 
18000c7d97c5SJed Brown    Input Parameters:
18010f202f7eSStefano Zampini +  pc - the preconditioner context
18020f202f7eSStefano Zampini -  r - input vector (global)
18030c7d97c5SJed Brown 
18040c7d97c5SJed Brown    Output Parameter:
18050c7d97c5SJed Brown .  z - output vector (global)
18060c7d97c5SJed Brown 
18070c7d97c5SJed Brown    Application Interface Routine: PCApply()
18080c7d97c5SJed Brown  */
180953cdbc3dSStefano Zampini PetscErrorCode PCApply_BDDC(PC pc,Vec r,Vec z)
18100c7d97c5SJed Brown {
18110c7d97c5SJed Brown   PC_IS             *pcis = (PC_IS*)(pc->data);
18120c7d97c5SJed Brown   PC_BDDC           *pcbddc = (PC_BDDC*)(pc->data);
1813b097fa66SStefano Zampini   PetscInt          n_B = pcis->n_B, n_D = pcis->n - n_B;
18140c7d97c5SJed Brown   PetscErrorCode    ierr;
18153b03a366Sstefano_zampini   const PetscScalar one = 1.0;
18163b03a366Sstefano_zampini   const PetscScalar m_one = -1.0;
18172617d88aSStefano Zampini   const PetscScalar zero = 0.0;
18180c7d97c5SJed Brown 
18190c7d97c5SJed Brown /* This code is similar to that provided in nn.c for PCNN
18200c7d97c5SJed Brown    NN interface preconditioner changed to BDDC
1821b097fa66SStefano Zampini    Added support for M_3 preconditioner in the reference article (code is active if pcbddc->switch_static == PETSC_TRUE) */
18220c7d97c5SJed Brown 
18230c7d97c5SJed Brown   PetscFunctionBegin;
1824f3d41395Sstefano_zampini   ierr = PetscCitationsRegister(citation,&cited);CHKERRQ(ierr);
18251dd7afcfSStefano Zampini   if (pcbddc->ChangeOfBasisMatrix) {
18261dd7afcfSStefano Zampini     Vec swap;
182727b6a85dSStefano Zampini 
182827b6a85dSStefano Zampini     ierr = MatMultTranspose(pcbddc->ChangeOfBasisMatrix,r,pcbddc->work_change);CHKERRQ(ierr);
18291dd7afcfSStefano Zampini     swap = pcbddc->work_change;
18301dd7afcfSStefano Zampini     pcbddc->work_change = r;
18311dd7afcfSStefano Zampini     r = swap;
18321dd7afcfSStefano Zampini     /* save rhs so that we don't need to apply the change of basis for the exact dirichlet trick in PreSolve */
18339cc2a9b1Sstefano_zampini     if (pcbddc->benign_apply_coarse_only && pcbddc->use_exact_dirichlet_trick && pcbddc->change_interior) {
18341dd7afcfSStefano Zampini       ierr = VecCopy(r,pcis->vec1_global);CHKERRQ(ierr);
18351dd7afcfSStefano Zampini       ierr = VecLockPush(pcis->vec1_global);CHKERRQ(ierr);
18361dd7afcfSStefano Zampini     }
18371dd7afcfSStefano Zampini   }
183827b6a85dSStefano Zampini   if (pcbddc->benign_have_null) { /* get p0 from r */
1839015636ebSStefano Zampini     ierr = PCBDDCBenignGetOrSetP0(pc,r,PETSC_TRUE);CHKERRQ(ierr);
1840efc2fbd9SStefano Zampini   }
18418ae0ca82SStefano Zampini   if (!pcbddc->exact_dirichlet_trick_app && !pcbddc->benign_apply_coarse_only) {
1842b097fa66SStefano Zampini     ierr = VecCopy(r,z);CHKERRQ(ierr);
18430c7d97c5SJed Brown     /* First Dirichlet solve */
18440c7d97c5SJed Brown     ierr = VecScatterBegin(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
18450c7d97c5SJed Brown     ierr = VecScatterEnd(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
18460c7d97c5SJed Brown     /*
18470c7d97c5SJed Brown       Assembling right hand side for BDDC operator
1848b097fa66SStefano Zampini       - pcis->vec1_D for the Dirichlet part (if needed, i.e. pcbddc->switch_static == PETSC_TRUE)
1849674ae819SStefano Zampini       - pcis->vec1_B the interface part of the global vector z
18500c7d97c5SJed Brown     */
1851b097fa66SStefano Zampini     if (n_D) {
1852b097fa66SStefano Zampini       ierr = KSPSolve(pcbddc->ksp_D,pcis->vec1_D,pcis->vec2_D);CHKERRQ(ierr);
18530c7d97c5SJed Brown       ierr = VecScale(pcis->vec2_D,m_one);CHKERRQ(ierr);
185416909a7fSStefano Zampini       if (pcbddc->switch_static) {
185516909a7fSStefano Zampini         Mat_IS *matis = (Mat_IS*)(pc->mat->data);
185616909a7fSStefano Zampini 
185716909a7fSStefano Zampini         ierr = VecSet(pcis->vec1_N,0.);CHKERRQ(ierr);
185816909a7fSStefano Zampini         ierr = VecScatterBegin(pcis->N_to_D,pcis->vec2_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
185916909a7fSStefano Zampini         ierr = VecScatterEnd(pcis->N_to_D,pcis->vec2_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
186016909a7fSStefano Zampini         if (!pcbddc->switch_static_change) {
186116909a7fSStefano Zampini           ierr = MatMult(matis->A,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
186216909a7fSStefano Zampini         } else {
186316909a7fSStefano Zampini           ierr = MatMult(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
186416909a7fSStefano Zampini           ierr = MatMult(matis->A,pcis->vec2_N,pcis->vec1_N);CHKERRQ(ierr);
186516909a7fSStefano Zampini           ierr = MatMultTranspose(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
186616909a7fSStefano Zampini         }
186716909a7fSStefano Zampini         ierr = VecScatterBegin(pcis->N_to_D,pcis->vec2_N,pcis->vec1_D,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
186816909a7fSStefano Zampini         ierr = VecScatterEnd(pcis->N_to_D,pcis->vec2_N,pcis->vec1_D,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
186916909a7fSStefano Zampini         ierr = VecScatterBegin(pcis->N_to_B,pcis->vec2_N,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
187016909a7fSStefano Zampini         ierr = VecScatterEnd(pcis->N_to_B,pcis->vec2_N,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
187116909a7fSStefano Zampini       } else {
1872b097fa66SStefano Zampini         ierr = MatMult(pcis->A_BI,pcis->vec2_D,pcis->vec1_B);CHKERRQ(ierr);
187316909a7fSStefano Zampini       }
1874b097fa66SStefano Zampini     } else {
1875b097fa66SStefano Zampini       ierr = VecSet(pcis->vec1_B,zero);CHKERRQ(ierr);
1876b097fa66SStefano Zampini     }
18770c7d97c5SJed Brown     ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
18780c7d97c5SJed Brown     ierr = VecScatterEnd(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1879674ae819SStefano Zampini     ierr = PCBDDCScalingRestriction(pc,z,pcis->vec1_B);CHKERRQ(ierr);
1880b76ba322SStefano Zampini   } else {
18814fee134fSStefano Zampini     if (!pcbddc->benign_apply_coarse_only) {
1882674ae819SStefano Zampini       ierr = PCBDDCScalingRestriction(pc,r,pcis->vec1_B);CHKERRQ(ierr);
1883b76ba322SStefano Zampini     }
18844fee134fSStefano Zampini   }
1885b76ba322SStefano Zampini 
18862617d88aSStefano Zampini   /* Apply interface preconditioner
18872617d88aSStefano Zampini      input/output vecs: pcis->vec1_B and pcis->vec1_D */
1888dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(pc,PETSC_FALSE);CHKERRQ(ierr);
18892617d88aSStefano Zampini 
1890674ae819SStefano Zampini   /* Apply transpose of partition of unity operator */
1891674ae819SStefano Zampini   ierr = PCBDDCScalingExtension(pc,pcis->vec1_B,z);CHKERRQ(ierr);
18920c7d97c5SJed Brown 
18933b03a366Sstefano_zampini   /* Second Dirichlet solve and assembling of output */
18940c7d97c5SJed Brown   ierr = VecScatterBegin(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
18950c7d97c5SJed Brown   ierr = VecScatterEnd(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1896b097fa66SStefano Zampini   if (n_B) {
189716909a7fSStefano Zampini     if (pcbddc->switch_static) {
189816909a7fSStefano Zampini       Mat_IS *matis = (Mat_IS*)(pc->mat->data);
189916909a7fSStefano Zampini 
190016909a7fSStefano Zampini       ierr = VecScatterBegin(pcis->N_to_D,pcis->vec1_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
190116909a7fSStefano Zampini       ierr = VecScatterEnd(pcis->N_to_D,pcis->vec1_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
190216909a7fSStefano Zampini       ierr = VecScatterBegin(pcis->N_to_B,pcis->vec1_B,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
190316909a7fSStefano Zampini       ierr = VecScatterEnd(pcis->N_to_B,pcis->vec1_B,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
190416909a7fSStefano Zampini       if (!pcbddc->switch_static_change) {
190516909a7fSStefano Zampini         ierr = MatMult(matis->A,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
190616909a7fSStefano Zampini       } else {
190716909a7fSStefano Zampini         ierr = MatMult(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
190816909a7fSStefano Zampini         ierr = MatMult(matis->A,pcis->vec2_N,pcis->vec1_N);CHKERRQ(ierr);
190916909a7fSStefano Zampini         ierr = MatMultTranspose(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
191016909a7fSStefano Zampini       }
191116909a7fSStefano Zampini       ierr = VecScatterBegin(pcis->N_to_D,pcis->vec2_N,pcis->vec3_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
191216909a7fSStefano Zampini       ierr = VecScatterEnd(pcis->N_to_D,pcis->vec2_N,pcis->vec3_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
191316909a7fSStefano Zampini     } else {
19140c7d97c5SJed Brown       ierr = MatMult(pcis->A_IB,pcis->vec1_B,pcis->vec3_D);CHKERRQ(ierr);
191516909a7fSStefano Zampini     }
191616909a7fSStefano Zampini   } else if (pcbddc->switch_static) { /* n_B is zero */
191716909a7fSStefano Zampini     Mat_IS *matis = (Mat_IS*)(pc->mat->data);
191816909a7fSStefano Zampini 
191916909a7fSStefano Zampini     if (!pcbddc->switch_static_change) {
192016909a7fSStefano Zampini       ierr = MatMult(matis->A,pcis->vec1_D,pcis->vec3_D);CHKERRQ(ierr);
192116909a7fSStefano Zampini     } else {
192216909a7fSStefano Zampini       ierr = MatMult(pcbddc->switch_static_change,pcis->vec1_D,pcis->vec1_N);CHKERRQ(ierr);
192316909a7fSStefano Zampini       ierr = MatMult(matis->A,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
192416909a7fSStefano Zampini       ierr = MatMultTranspose(pcbddc->switch_static_change,pcis->vec2_N,pcis->vec3_D);CHKERRQ(ierr);
192516909a7fSStefano Zampini     }
1926b097fa66SStefano Zampini   }
1927df187020SStefano Zampini   ierr = KSPSolve(pcbddc->ksp_D,pcis->vec3_D,pcis->vec4_D);CHKERRQ(ierr);
1928efc2fbd9SStefano Zampini 
19298ae0ca82SStefano Zampini   if (!pcbddc->exact_dirichlet_trick_app && !pcbddc->benign_apply_coarse_only) {
1930b097fa66SStefano Zampini     if (pcbddc->switch_static) {
1931b097fa66SStefano Zampini       ierr = VecAXPBYPCZ(pcis->vec2_D,m_one,one,m_one,pcis->vec4_D,pcis->vec1_D);CHKERRQ(ierr);
1932b097fa66SStefano Zampini     } else {
1933b097fa66SStefano Zampini       ierr = VecAXPBY(pcis->vec2_D,m_one,m_one,pcis->vec4_D);CHKERRQ(ierr);
1934b097fa66SStefano Zampini     }
19350c7d97c5SJed Brown     ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
19360c7d97c5SJed Brown     ierr = VecScatterEnd(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1937b097fa66SStefano Zampini   } else {
1938b097fa66SStefano Zampini     if (pcbddc->switch_static) {
1939b097fa66SStefano Zampini       ierr = VecAXPBY(pcis->vec4_D,one,m_one,pcis->vec1_D);CHKERRQ(ierr);
1940b097fa66SStefano Zampini     } else {
1941b097fa66SStefano Zampini       ierr = VecScale(pcis->vec4_D,m_one);CHKERRQ(ierr);
1942b097fa66SStefano Zampini     }
1943b097fa66SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_D,pcis->vec4_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1944b097fa66SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_D,pcis->vec4_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
1945b097fa66SStefano Zampini   }
194627b6a85dSStefano Zampini   if (pcbddc->benign_have_null) { /* set p0 (computed in PCBDDCApplyInterface) */
19471dd7afcfSStefano Zampini     if (pcbddc->benign_apply_coarse_only) {
19481dd7afcfSStefano Zampini       ierr = PetscMemzero(pcbddc->benign_p0,pcbddc->benign_n*sizeof(PetscScalar));CHKERRQ(ierr);
19491dd7afcfSStefano Zampini     }
1950015636ebSStefano Zampini     ierr = PCBDDCBenignGetOrSetP0(pc,z,PETSC_FALSE);CHKERRQ(ierr);
1951efc2fbd9SStefano Zampini   }
19521f4df5f7SStefano Zampini 
19531dd7afcfSStefano Zampini   if (pcbddc->ChangeOfBasisMatrix) {
1954f913dca9SStefano Zampini     pcbddc->work_change = r;
19551dd7afcfSStefano Zampini     ierr = VecCopy(z,pcbddc->work_change);CHKERRQ(ierr);
19561dd7afcfSStefano Zampini     ierr = MatMult(pcbddc->ChangeOfBasisMatrix,pcbddc->work_change,z);CHKERRQ(ierr);
19571dd7afcfSStefano Zampini   }
19580c7d97c5SJed Brown   PetscFunctionReturn(0);
19590c7d97c5SJed Brown }
196050efa1b5SStefano Zampini 
196150efa1b5SStefano Zampini /*
196250efa1b5SStefano Zampini    PCApplyTranspose_BDDC - Applies the transpose of the BDDC operator to a vector.
196350efa1b5SStefano Zampini 
196450efa1b5SStefano Zampini    Input Parameters:
19650f202f7eSStefano Zampini +  pc - the preconditioner context
19660f202f7eSStefano Zampini -  r - input vector (global)
196750efa1b5SStefano Zampini 
196850efa1b5SStefano Zampini    Output Parameter:
196950efa1b5SStefano Zampini .  z - output vector (global)
197050efa1b5SStefano Zampini 
197150efa1b5SStefano Zampini    Application Interface Routine: PCApplyTranspose()
197250efa1b5SStefano Zampini  */
197350efa1b5SStefano Zampini PetscErrorCode PCApplyTranspose_BDDC(PC pc,Vec r,Vec z)
197450efa1b5SStefano Zampini {
197550efa1b5SStefano Zampini   PC_IS             *pcis = (PC_IS*)(pc->data);
197650efa1b5SStefano Zampini   PC_BDDC           *pcbddc = (PC_BDDC*)(pc->data);
1977b097fa66SStefano Zampini   PetscInt          n_B = pcis->n_B, n_D = pcis->n - n_B;
197850efa1b5SStefano Zampini   PetscErrorCode    ierr;
197950efa1b5SStefano Zampini   const PetscScalar one = 1.0;
198050efa1b5SStefano Zampini   const PetscScalar m_one = -1.0;
198150efa1b5SStefano Zampini   const PetscScalar zero = 0.0;
198250efa1b5SStefano Zampini 
198350efa1b5SStefano Zampini   PetscFunctionBegin;
1984f3d41395Sstefano_zampini   ierr = PetscCitationsRegister(citation,&cited);CHKERRQ(ierr);
19851dd7afcfSStefano Zampini   if (pcbddc->ChangeOfBasisMatrix) {
19861dd7afcfSStefano Zampini     Vec swap;
198727b6a85dSStefano Zampini 
198827b6a85dSStefano Zampini     ierr = MatMultTranspose(pcbddc->ChangeOfBasisMatrix,r,pcbddc->work_change);CHKERRQ(ierr);
19891dd7afcfSStefano Zampini     swap = pcbddc->work_change;
19901dd7afcfSStefano Zampini     pcbddc->work_change = r;
19911dd7afcfSStefano Zampini     r = swap;
199227b6a85dSStefano Zampini     /* save rhs so that we don't need to apply the change of basis for the exact dirichlet trick in PreSolve */
19938ae0ca82SStefano Zampini     if (pcbddc->benign_apply_coarse_only && pcbddc->exact_dirichlet_trick_app && pcbddc->change_interior) {
199427b6a85dSStefano Zampini       ierr = VecCopy(r,pcis->vec1_global);CHKERRQ(ierr);
199527b6a85dSStefano Zampini       ierr = VecLockPush(pcis->vec1_global);CHKERRQ(ierr);
19961dd7afcfSStefano Zampini     }
199727b6a85dSStefano Zampini   }
199827b6a85dSStefano Zampini   if (pcbddc->benign_have_null) { /* get p0 from r */
1999537c1cdfSStefano Zampini     ierr = PCBDDCBenignGetOrSetP0(pc,r,PETSC_TRUE);CHKERRQ(ierr);
2000537c1cdfSStefano Zampini   }
20018ae0ca82SStefano Zampini   if (!pcbddc->exact_dirichlet_trick_app && !pcbddc->benign_apply_coarse_only) {
2002b097fa66SStefano Zampini     ierr = VecCopy(r,z);CHKERRQ(ierr);
200350efa1b5SStefano Zampini     /* First Dirichlet solve */
200450efa1b5SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
200550efa1b5SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_D,r,pcis->vec1_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
200650efa1b5SStefano Zampini     /*
200750efa1b5SStefano Zampini       Assembling right hand side for BDDC operator
2008b097fa66SStefano Zampini       - pcis->vec1_D for the Dirichlet part (if needed, i.e. pcbddc->switch_static == PETSC_TRUE)
200950efa1b5SStefano Zampini       - pcis->vec1_B the interface part of the global vector z
201050efa1b5SStefano Zampini     */
2011b097fa66SStefano Zampini     if (n_D) {
2012b097fa66SStefano Zampini       ierr = KSPSolveTranspose(pcbddc->ksp_D,pcis->vec1_D,pcis->vec2_D);CHKERRQ(ierr);
201350efa1b5SStefano Zampini       ierr = VecScale(pcis->vec2_D,m_one);CHKERRQ(ierr);
201416909a7fSStefano Zampini       if (pcbddc->switch_static) {
201516909a7fSStefano Zampini         Mat_IS *matis = (Mat_IS*)(pc->mat->data);
201616909a7fSStefano Zampini 
201716909a7fSStefano Zampini         ierr = VecSet(pcis->vec1_N,0.);CHKERRQ(ierr);
201816909a7fSStefano Zampini         ierr = VecScatterBegin(pcis->N_to_D,pcis->vec2_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
201916909a7fSStefano Zampini         ierr = VecScatterEnd(pcis->N_to_D,pcis->vec2_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
202016909a7fSStefano Zampini         if (!pcbddc->switch_static_change) {
202116909a7fSStefano Zampini           ierr = MatMultTranspose(matis->A,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
202216909a7fSStefano Zampini         } else {
202316909a7fSStefano Zampini           ierr = MatMult(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
202416909a7fSStefano Zampini           ierr = MatMultTranspose(matis->A,pcis->vec2_N,pcis->vec1_N);CHKERRQ(ierr);
202516909a7fSStefano Zampini           ierr = MatMultTranspose(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
202616909a7fSStefano Zampini         }
202716909a7fSStefano Zampini         ierr = VecScatterBegin(pcis->N_to_D,pcis->vec2_N,pcis->vec1_D,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
202816909a7fSStefano Zampini         ierr = VecScatterEnd(pcis->N_to_D,pcis->vec2_N,pcis->vec1_D,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
202916909a7fSStefano Zampini         ierr = VecScatterBegin(pcis->N_to_B,pcis->vec2_N,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
203016909a7fSStefano Zampini         ierr = VecScatterEnd(pcis->N_to_B,pcis->vec2_N,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
203116909a7fSStefano Zampini       } else {
2032b097fa66SStefano Zampini         ierr = MatMultTranspose(pcis->A_IB,pcis->vec2_D,pcis->vec1_B);CHKERRQ(ierr);
203316909a7fSStefano Zampini       }
2034b097fa66SStefano Zampini     } else {
2035b097fa66SStefano Zampini       ierr = VecSet(pcis->vec1_B,zero);CHKERRQ(ierr);
2036b097fa66SStefano Zampini     }
203750efa1b5SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
203850efa1b5SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_B,pcis->vec1_B,z,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
203950efa1b5SStefano Zampini     ierr = PCBDDCScalingRestriction(pc,z,pcis->vec1_B);CHKERRQ(ierr);
204050efa1b5SStefano Zampini   } else {
204150efa1b5SStefano Zampini     ierr = PCBDDCScalingRestriction(pc,r,pcis->vec1_B);CHKERRQ(ierr);
204250efa1b5SStefano Zampini   }
204350efa1b5SStefano Zampini 
204450efa1b5SStefano Zampini   /* Apply interface preconditioner
204550efa1b5SStefano Zampini      input/output vecs: pcis->vec1_B and pcis->vec1_D */
2046dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(pc,PETSC_TRUE);CHKERRQ(ierr);
204750efa1b5SStefano Zampini 
204850efa1b5SStefano Zampini   /* Apply transpose of partition of unity operator */
204950efa1b5SStefano Zampini   ierr = PCBDDCScalingExtension(pc,pcis->vec1_B,z);CHKERRQ(ierr);
205050efa1b5SStefano Zampini 
205150efa1b5SStefano Zampini   /* Second Dirichlet solve and assembling of output */
205250efa1b5SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
205350efa1b5SStefano Zampini   ierr = VecScatterEnd(pcis->global_to_B,z,pcis->vec1_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2054b097fa66SStefano Zampini   if (n_B) {
205516909a7fSStefano Zampini     if (pcbddc->switch_static) {
205616909a7fSStefano Zampini       Mat_IS *matis = (Mat_IS*)(pc->mat->data);
205716909a7fSStefano Zampini 
205816909a7fSStefano Zampini       ierr = VecScatterBegin(pcis->N_to_D,pcis->vec1_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
205916909a7fSStefano Zampini       ierr = VecScatterEnd(pcis->N_to_D,pcis->vec1_D,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
206016909a7fSStefano Zampini       ierr = VecScatterBegin(pcis->N_to_B,pcis->vec1_B,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
206116909a7fSStefano Zampini       ierr = VecScatterEnd(pcis->N_to_B,pcis->vec1_B,pcis->vec1_N,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
206216909a7fSStefano Zampini       if (!pcbddc->switch_static_change) {
206316909a7fSStefano Zampini         ierr = MatMultTranspose(matis->A,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
206416909a7fSStefano Zampini       } else {
206516909a7fSStefano Zampini         ierr = MatMult(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
206616909a7fSStefano Zampini         ierr = MatMultTranspose(matis->A,pcis->vec2_N,pcis->vec1_N);CHKERRQ(ierr);
206716909a7fSStefano Zampini         ierr = MatMultTranspose(pcbddc->switch_static_change,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
206816909a7fSStefano Zampini       }
206916909a7fSStefano Zampini       ierr = VecScatterBegin(pcis->N_to_D,pcis->vec2_N,pcis->vec3_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
207016909a7fSStefano Zampini       ierr = VecScatterEnd(pcis->N_to_D,pcis->vec2_N,pcis->vec3_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
207116909a7fSStefano Zampini     } else {
207250efa1b5SStefano Zampini       ierr = MatMultTranspose(pcis->A_BI,pcis->vec1_B,pcis->vec3_D);CHKERRQ(ierr);
207316909a7fSStefano Zampini     }
207416909a7fSStefano Zampini   } else if (pcbddc->switch_static) { /* n_B is zero */
207516909a7fSStefano Zampini     Mat_IS *matis = (Mat_IS*)(pc->mat->data);
207616909a7fSStefano Zampini 
207716909a7fSStefano Zampini     if (!pcbddc->switch_static_change) {
207816909a7fSStefano Zampini       ierr = MatMultTranspose(matis->A,pcis->vec1_D,pcis->vec3_D);CHKERRQ(ierr);
207916909a7fSStefano Zampini     } else {
208016909a7fSStefano Zampini       ierr = MatMult(pcbddc->switch_static_change,pcis->vec1_D,pcis->vec1_N);CHKERRQ(ierr);
208116909a7fSStefano Zampini       ierr = MatMultTranspose(matis->A,pcis->vec1_N,pcis->vec2_N);CHKERRQ(ierr);
208216909a7fSStefano Zampini       ierr = MatMultTranspose(pcbddc->switch_static_change,pcis->vec2_N,pcis->vec3_D);CHKERRQ(ierr);
208316909a7fSStefano Zampini     }
2084b097fa66SStefano Zampini   }
2085b0147a47SStefano Zampini   ierr = KSPSolveTranspose(pcbddc->ksp_D,pcis->vec3_D,pcis->vec4_D);CHKERRQ(ierr);
20868ae0ca82SStefano Zampini   if (!pcbddc->exact_dirichlet_trick_app && !pcbddc->benign_apply_coarse_only) {
2087b097fa66SStefano Zampini     if (pcbddc->switch_static) {
2088b097fa66SStefano Zampini       ierr = VecAXPBYPCZ(pcis->vec2_D,m_one,one,m_one,pcis->vec4_D,pcis->vec1_D);CHKERRQ(ierr);
2089b097fa66SStefano Zampini     } else {
2090b097fa66SStefano Zampini       ierr = VecAXPBY(pcis->vec2_D,m_one,m_one,pcis->vec4_D);CHKERRQ(ierr);
2091b097fa66SStefano Zampini     }
209250efa1b5SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
209350efa1b5SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_D,pcis->vec2_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2094b097fa66SStefano Zampini   } else {
2095b097fa66SStefano Zampini     if (pcbddc->switch_static) {
2096b097fa66SStefano Zampini       ierr = VecAXPBY(pcis->vec4_D,one,m_one,pcis->vec1_D);CHKERRQ(ierr);
2097b097fa66SStefano Zampini     } else {
2098b097fa66SStefano Zampini       ierr = VecScale(pcis->vec4_D,m_one);CHKERRQ(ierr);
2099b097fa66SStefano Zampini     }
2100b097fa66SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_D,pcis->vec4_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2101b097fa66SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_D,pcis->vec4_D,z,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2102b097fa66SStefano Zampini   }
210327b6a85dSStefano Zampini   if (pcbddc->benign_have_null) { /* set p0 (computed in PCBDDCApplyInterface) */
2104537c1cdfSStefano Zampini     ierr = PCBDDCBenignGetOrSetP0(pc,z,PETSC_FALSE);CHKERRQ(ierr);
2105537c1cdfSStefano Zampini   }
21061dd7afcfSStefano Zampini   if (pcbddc->ChangeOfBasisMatrix) {
2107f913dca9SStefano Zampini     pcbddc->work_change = r;
21081dd7afcfSStefano Zampini     ierr = VecCopy(z,pcbddc->work_change);CHKERRQ(ierr);
21091dd7afcfSStefano Zampini     ierr = MatMult(pcbddc->ChangeOfBasisMatrix,pcbddc->work_change,z);CHKERRQ(ierr);
21101dd7afcfSStefano Zampini   }
211150efa1b5SStefano Zampini   PetscFunctionReturn(0);
211250efa1b5SStefano Zampini }
2113674ae819SStefano Zampini 
21149326c5c6Sstefano_zampini PetscErrorCode PCReset_BDDC(PC pc)
2115da1bb401SStefano Zampini {
2116da1bb401SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
21179326c5c6Sstefano_zampini   PC_IS          *pcis = (PC_IS*)pc->data;
21189326c5c6Sstefano_zampini   KSP            kspD,kspR,kspC;
2119da1bb401SStefano Zampini   PetscErrorCode ierr;
2120da1bb401SStefano Zampini 
2121da1bb401SStefano Zampini   PetscFunctionBegin;
2122674ae819SStefano Zampini   /* free BDDC custom data  */
2123674ae819SStefano Zampini   ierr = PCBDDCResetCustomization(pc);CHKERRQ(ierr);
2124674ae819SStefano Zampini   /* destroy objects related to topography */
2125674ae819SStefano Zampini   ierr = PCBDDCResetTopography(pc);CHKERRQ(ierr);
212634a97f8cSStefano Zampini   /* destroy objects for scaling operator */
2127674ae819SStefano Zampini   ierr = PCBDDCScalingDestroy(pc);CHKERRQ(ierr);
2128674ae819SStefano Zampini   /* free solvers stuff */
2129674ae819SStefano Zampini   ierr = PCBDDCResetSolvers(pc);CHKERRQ(ierr);
213062a6ff1dSStefano Zampini   /* free global vectors needed in presolve */
213162a6ff1dSStefano Zampini   ierr = VecDestroy(&pcbddc->temp_solution);CHKERRQ(ierr);
213262a6ff1dSStefano Zampini   ierr = VecDestroy(&pcbddc->original_rhs);CHKERRQ(ierr);
21331dd7afcfSStefano Zampini   /* free data created by PCIS */
21341dd7afcfSStefano Zampini   ierr = PCISDestroy(pc);CHKERRQ(ierr);
21359326c5c6Sstefano_zampini 
21369326c5c6Sstefano_zampini   /* restore defaults */
21379326c5c6Sstefano_zampini   kspD = pcbddc->ksp_D;
21389326c5c6Sstefano_zampini   kspR = pcbddc->ksp_R;
21399326c5c6Sstefano_zampini   kspC = pcbddc->coarse_ksp;
21409326c5c6Sstefano_zampini   ierr = PetscMemzero(pc->data,sizeof(*pcbddc));CHKERRQ(ierr);
21419326c5c6Sstefano_zampini   pcis->n_neigh                     = -1;
21429326c5c6Sstefano_zampini   pcis->scaling_factor              = 1.0;
21439326c5c6Sstefano_zampini   pcis->reusesubmatrices            = PETSC_TRUE;
21449326c5c6Sstefano_zampini   pcbddc->use_local_adj             = PETSC_TRUE;
21459326c5c6Sstefano_zampini   pcbddc->use_vertices              = PETSC_TRUE;
21469326c5c6Sstefano_zampini   pcbddc->use_edges                 = PETSC_TRUE;
21479326c5c6Sstefano_zampini   pcbddc->symmetric_primal          = PETSC_TRUE;
21489326c5c6Sstefano_zampini   pcbddc->vertex_size               = 1;
21499326c5c6Sstefano_zampini   pcbddc->recompute_topography      = PETSC_TRUE;
21509326c5c6Sstefano_zampini   pcbddc->coarse_size               = -1;
21519326c5c6Sstefano_zampini   pcbddc->use_exact_dirichlet_trick = PETSC_TRUE;
21529326c5c6Sstefano_zampini   pcbddc->coarsening_ratio          = 8;
21539326c5c6Sstefano_zampini   pcbddc->coarse_eqs_per_proc       = 1;
21549326c5c6Sstefano_zampini   pcbddc->benign_compute_correction = PETSC_TRUE;
21559326c5c6Sstefano_zampini   pcbddc->nedfield                  = -1;
21569326c5c6Sstefano_zampini   pcbddc->nedglobal                 = PETSC_TRUE;
21579326c5c6Sstefano_zampini   pcbddc->graphmaxcount             = PETSC_MAX_INT;
21589326c5c6Sstefano_zampini   pcbddc->sub_schurs_layers         = -1;
21599326c5c6Sstefano_zampini   pcbddc->ksp_D                     = kspD;
21609326c5c6Sstefano_zampini   pcbddc->ksp_R                     = kspR;
21619326c5c6Sstefano_zampini   pcbddc->coarse_ksp                = kspC;
21629326c5c6Sstefano_zampini   PetscFunctionReturn(0);
21639326c5c6Sstefano_zampini }
21649326c5c6Sstefano_zampini 
21659326c5c6Sstefano_zampini PetscErrorCode PCDestroy_BDDC(PC pc)
21669326c5c6Sstefano_zampini {
21679326c5c6Sstefano_zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
21689326c5c6Sstefano_zampini   PetscErrorCode ierr;
21699326c5c6Sstefano_zampini 
21709326c5c6Sstefano_zampini   PetscFunctionBegin;
21719326c5c6Sstefano_zampini   ierr = PCReset_BDDC(pc);CHKERRQ(ierr);
21729326c5c6Sstefano_zampini   ierr = KSPDestroy(&pcbddc->ksp_D);CHKERRQ(ierr);
21739326c5c6Sstefano_zampini   ierr = KSPDestroy(&pcbddc->ksp_R);CHKERRQ(ierr);
21749326c5c6Sstefano_zampini   ierr = KSPDestroy(&pcbddc->coarse_ksp);CHKERRQ(ierr);
2175a13144ffSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDiscreteGradient_C",NULL);CHKERRQ(ierr);
2176a198735bSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDivergenceMat_C",NULL);CHKERRQ(ierr);
2177906d46d4SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetChangeOfBasisMat_C",NULL);CHKERRQ(ierr);
2178674ae819SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetPrimalVerticesLocalIS_C",NULL);CHKERRQ(ierr);
217930368db7SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetPrimalVerticesIS_C",NULL);CHKERRQ(ierr);
2180bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetCoarseningRatio_C",NULL);CHKERRQ(ierr);
21812b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevel_C",NULL);CHKERRQ(ierr);
2182b8ffe317SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetUseExactDirichlet_C",NULL);CHKERRQ(ierr);
21832b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevels_C",NULL);CHKERRQ(ierr);
2184bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundaries_C",NULL);CHKERRQ(ierr);
218582ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundariesLocal_C",NULL);CHKERRQ(ierr);
2186bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundaries_C",NULL);CHKERRQ(ierr);
218782ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundariesLocal_C",NULL);CHKERRQ(ierr);
2188bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundaries_C",NULL);CHKERRQ(ierr);
218982ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundariesLocal_C",NULL);CHKERRQ(ierr);
2190bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundaries_C",NULL);CHKERRQ(ierr);
2191785d1243SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundariesLocal_C",NULL);CHKERRQ(ierr);
2192bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplitting_C",NULL);CHKERRQ(ierr);
219363602bcaSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplittingLocal_C",NULL);CHKERRQ(ierr);
2194bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLocalAdjacencyGraph_C",NULL);CHKERRQ(ierr);
2195bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCCreateFETIDPOperators_C",NULL);CHKERRQ(ierr);
2196bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetRHS_C",NULL);CHKERRQ(ierr);
2197bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetSolution_C",NULL);CHKERRQ(ierr);
2198a06fd7f2SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCPreSolveChangeRHS_C",NULL);CHKERRQ(ierr);
2199ab8c8b98SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCSetCoordinates_C",NULL);CHKERRQ(ierr);
2200674ae819SStefano Zampini   ierr = PetscFree(pc->data);CHKERRQ(ierr);
2201da1bb401SStefano Zampini   PetscFunctionReturn(0);
2202da1bb401SStefano Zampini }
22031e6b0712SBarry Smith 
2204ab8c8b98SStefano Zampini static PetscErrorCode PCSetCoordinates_BDDC(PC pc, PetscInt dim, PetscInt nloc, PetscReal *coords)
2205ab8c8b98SStefano Zampini {
2206ab8c8b98SStefano Zampini   PC_BDDC        *pcbddc = (PC_BDDC*)pc->data;
2207ab8c8b98SStefano Zampini   PCBDDCGraph    mat_graph = pcbddc->mat_graph;
2208ab8c8b98SStefano Zampini   PetscErrorCode ierr;
2209ab8c8b98SStefano Zampini 
2210ab8c8b98SStefano Zampini   PetscFunctionBegin;
2211ab8c8b98SStefano Zampini   ierr = PetscFree(mat_graph->coords);CHKERRQ(ierr);
2212ab8c8b98SStefano Zampini   ierr = PetscMalloc1(nloc*dim,&mat_graph->coords);CHKERRQ(ierr);
2213ab8c8b98SStefano Zampini   ierr = PetscMemcpy(mat_graph->coords,coords,nloc*dim*sizeof(PetscReal));CHKERRQ(ierr);
2214ab8c8b98SStefano Zampini   mat_graph->cnloc = nloc;
2215ab8c8b98SStefano Zampini   mat_graph->cdim  = dim;
2216ab8c8b98SStefano Zampini   mat_graph->cloc  = PETSC_FALSE;
2217ab8c8b98SStefano Zampini   PetscFunctionReturn(0);
2218ab8c8b98SStefano Zampini }
2219ab8c8b98SStefano Zampini 
2220a06fd7f2SStefano Zampini static PetscErrorCode PCPreSolveChangeRHS_BDDC(PC pc, PetscBool* change)
2221a06fd7f2SStefano Zampini {
2222a06fd7f2SStefano Zampini   PetscFunctionBegin;
2223a06fd7f2SStefano Zampini   *change = PETSC_TRUE;
2224a06fd7f2SStefano Zampini   PetscFunctionReturn(0);
2225a06fd7f2SStefano Zampini }
2226a06fd7f2SStefano Zampini 
22273425bc38SStefano Zampini static PetscErrorCode PCBDDCMatFETIDPGetRHS_BDDC(Mat fetidp_mat, Vec standard_rhs, Vec fetidp_flux_rhs)
22283425bc38SStefano Zampini {
2229674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
2230266e20e9SStefano Zampini   Vec            work;
22313425bc38SStefano Zampini   PC_IS*         pcis;
22323425bc38SStefano Zampini   PC_BDDC*       pcbddc;
22333425bc38SStefano Zampini   PetscErrorCode ierr;
22340c7d97c5SJed Brown 
22353425bc38SStefano Zampini   PetscFunctionBegin;
22363425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
22373425bc38SStefano Zampini   pcis = (PC_IS*)mat_ctx->pc->data;
22383425bc38SStefano Zampini   pcbddc = (PC_BDDC*)mat_ctx->pc->data;
22393425bc38SStefano Zampini 
2240229984c5Sstefano_zampini   ierr = VecSet(fetidp_flux_rhs,0.0);CHKERRQ(ierr);
2241229984c5Sstefano_zampini   /* copy rhs since we may change it during PCPreSolve_BDDC */
2242229984c5Sstefano_zampini   if (!pcbddc->original_rhs) {
2243229984c5Sstefano_zampini     ierr = VecDuplicate(pcis->vec1_global,&pcbddc->original_rhs);CHKERRQ(ierr);
2244229984c5Sstefano_zampini   }
22456cc1294bSstefano_zampini   if (mat_ctx->rhs_flip) {
22466cc1294bSstefano_zampini     ierr = VecPointwiseMult(pcbddc->original_rhs,standard_rhs,mat_ctx->rhs_flip);CHKERRQ(ierr);
22476cc1294bSstefano_zampini   } else {
2248229984c5Sstefano_zampini     ierr = VecCopy(standard_rhs,pcbddc->original_rhs);CHKERRQ(ierr);
22496cc1294bSstefano_zampini   }
2250af140850Sstefano_zampini   if (mat_ctx->g2g_p) {
2251229984c5Sstefano_zampini     /* interface pressure rhs */
2252022d8d2bSstefano_zampini     ierr = VecScatterBegin(mat_ctx->g2g_p,fetidp_flux_rhs,pcbddc->original_rhs,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2253022d8d2bSstefano_zampini     ierr = VecScatterEnd(mat_ctx->g2g_p,fetidp_flux_rhs,pcbddc->original_rhs,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2254229984c5Sstefano_zampini     ierr = VecScatterBegin(mat_ctx->g2g_p,standard_rhs,fetidp_flux_rhs,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2255229984c5Sstefano_zampini     ierr = VecScatterEnd(mat_ctx->g2g_p,standard_rhs,fetidp_flux_rhs,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
22566cc1294bSstefano_zampini     if (!mat_ctx->rhs_flip) {
2257229984c5Sstefano_zampini       ierr = VecScale(fetidp_flux_rhs,-1.);CHKERRQ(ierr);
2258229984c5Sstefano_zampini     }
22596cc1294bSstefano_zampini   }
2260c08af4c6SStefano Zampini   /*
2261c08af4c6SStefano Zampini      change of basis for physical rhs if needed
2262c08af4c6SStefano Zampini      It also changes the rhs in case of dirichlet boundaries
2263c08af4c6SStefano Zampini   */
22643738a8e6SStefano Zampini   ierr = PCPreSolve_BDDC(mat_ctx->pc,NULL,pcbddc->original_rhs,NULL);CHKERRQ(ierr);
2265fc17d649SStefano Zampini   if (pcbddc->ChangeOfBasisMatrix) {
22663738a8e6SStefano Zampini     ierr = MatMultTranspose(pcbddc->ChangeOfBasisMatrix,pcbddc->original_rhs,pcbddc->work_change);CHKERRQ(ierr);
22673738a8e6SStefano Zampini     work = pcbddc->work_change;
2268fc17d649SStefano Zampini    } else {
22693738a8e6SStefano Zampini     work = pcbddc->original_rhs;
2270fc17d649SStefano Zampini   }
22713425bc38SStefano Zampini   /* store vectors for computation of fetidp final solution */
2272266e20e9SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_D,work,mat_ctx->temp_solution_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2273266e20e9SStefano Zampini   ierr = VecScatterEnd(pcis->global_to_D,work,mat_ctx->temp_solution_D,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2274fb223d50SStefano Zampini   /* scale rhs since it should be unassembled */
2275fb223d50SStefano Zampini   /* TODO use counter scaling? (also below) */
2276266e20e9SStefano Zampini   ierr = VecScatterBegin(pcis->global_to_B,work,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2277266e20e9SStefano Zampini   ierr = VecScatterEnd(pcis->global_to_B,work,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2278674ae819SStefano Zampini   /* Apply partition of unity */
22793425bc38SStefano Zampini   ierr = VecPointwiseMult(mat_ctx->temp_solution_B,pcis->D,mat_ctx->temp_solution_B);CHKERRQ(ierr);
2280266e20e9SStefano Zampini   /* ierr = PCBDDCScalingRestriction(mat_ctx->pc,work,mat_ctx->temp_solution_B);CHKERRQ(ierr); */
22818eeda7d8SStefano Zampini   if (!pcbddc->switch_static) {
22823425bc38SStefano Zampini     /* compute partially subassembled Schur complement right-hand side */
22833425bc38SStefano Zampini     ierr = KSPSolve(pcbddc->ksp_D,mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr);
22843425bc38SStefano Zampini     ierr = MatMult(pcis->A_BI,pcis->vec1_D,pcis->vec1_B);CHKERRQ(ierr);
22853425bc38SStefano Zampini     ierr = VecAXPY(mat_ctx->temp_solution_B,-1.0,pcis->vec1_B);CHKERRQ(ierr);
2286266e20e9SStefano Zampini     ierr = VecSet(work,0.0);CHKERRQ(ierr);
2287266e20e9SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,mat_ctx->temp_solution_B,work,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2288266e20e9SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_B,mat_ctx->temp_solution_B,work,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2289266e20e9SStefano Zampini     /* ierr = PCBDDCScalingRestriction(mat_ctx->pc,work,mat_ctx->temp_solution_B);CHKERRQ(ierr); */
2290266e20e9SStefano Zampini     ierr = VecScatterBegin(pcis->global_to_B,work,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2291266e20e9SStefano Zampini     ierr = VecScatterEnd(pcis->global_to_B,work,mat_ctx->temp_solution_B,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
22923425bc38SStefano Zampini     ierr = VecPointwiseMult(mat_ctx->temp_solution_B,pcis->D,mat_ctx->temp_solution_B);CHKERRQ(ierr);
22933425bc38SStefano Zampini   }
22943425bc38SStefano Zampini   /* BDDC rhs */
22953425bc38SStefano Zampini   ierr = VecCopy(mat_ctx->temp_solution_B,pcis->vec1_B);CHKERRQ(ierr);
22968eeda7d8SStefano Zampini   if (pcbddc->switch_static) {
22973425bc38SStefano Zampini     ierr = VecCopy(mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr);
22983425bc38SStefano Zampini   }
22993425bc38SStefano Zampini   /* apply BDDC */
2300229984c5Sstefano_zampini   ierr = PetscMemzero(pcbddc->benign_p0,pcbddc->benign_n*sizeof(PetscScalar));CHKERRQ(ierr);
2301dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(mat_ctx->pc,PETSC_FALSE);CHKERRQ(ierr);
2302266e20e9SStefano Zampini   ierr = PetscMemzero(pcbddc->benign_p0,pcbddc->benign_n*sizeof(PetscScalar));CHKERRQ(ierr);
2303229984c5Sstefano_zampini 
23043425bc38SStefano Zampini   /* Application of B_delta and assembling of rhs for fetidp fluxes */
23053425bc38SStefano Zampini   ierr = MatMult(mat_ctx->B_delta,pcis->vec1_B,mat_ctx->lambda_local);CHKERRQ(ierr);
23063425bc38SStefano Zampini   ierr = VecScatterBegin(mat_ctx->l2g_lambda,mat_ctx->lambda_local,fetidp_flux_rhs,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
23073425bc38SStefano Zampini   ierr = VecScatterEnd(mat_ctx->l2g_lambda,mat_ctx->lambda_local,fetidp_flux_rhs,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2308229984c5Sstefano_zampini   /* Add contribution to interface pressures */
2309229984c5Sstefano_zampini   if (mat_ctx->l2g_p) {
2310229984c5Sstefano_zampini     ierr = MatMult(mat_ctx->B_BB,pcis->vec1_B,mat_ctx->vP);CHKERRQ(ierr);
2311229984c5Sstefano_zampini     if (pcbddc->switch_static) {
2312229984c5Sstefano_zampini       ierr = MatMultAdd(mat_ctx->B_BI,pcis->vec1_D,mat_ctx->vP,mat_ctx->vP);CHKERRQ(ierr);
2313229984c5Sstefano_zampini     }
2314229984c5Sstefano_zampini     ierr = VecScatterBegin(mat_ctx->l2g_p,mat_ctx->vP,fetidp_flux_rhs,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2315229984c5Sstefano_zampini     ierr = VecScatterEnd(mat_ctx->l2g_p,mat_ctx->vP,fetidp_flux_rhs,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
2316229984c5Sstefano_zampini   }
23173425bc38SStefano Zampini   PetscFunctionReturn(0);
23183425bc38SStefano Zampini }
23191e6b0712SBarry Smith 
23203425bc38SStefano Zampini /*@
23210f202f7eSStefano Zampini  PCBDDCMatFETIDPGetRHS - Compute the right-hand side for FETI-DP linear system using the physical right-hand side
23223425bc38SStefano Zampini 
23233425bc38SStefano Zampini    Collective
23243425bc38SStefano Zampini 
23253425bc38SStefano Zampini    Input Parameters:
23260f202f7eSStefano Zampini +  fetidp_mat      - the FETI-DP matrix object obtained by a call to PCBDDCCreateFETIDPOperators
23270f202f7eSStefano Zampini -  standard_rhs    - the right-hand side of the original linear system
23283425bc38SStefano Zampini 
23293425bc38SStefano Zampini    Output Parameters:
23300f202f7eSStefano Zampini .  fetidp_flux_rhs - the right-hand side for the FETI-DP linear system
23313425bc38SStefano Zampini 
23323425bc38SStefano Zampini    Level: developer
23333425bc38SStefano Zampini 
23343425bc38SStefano Zampini    Notes:
23353425bc38SStefano Zampini 
23360f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCCreateFETIDPOperators, PCBDDCMatFETIDPGetSolution
23373425bc38SStefano Zampini @*/
23383425bc38SStefano Zampini PetscErrorCode PCBDDCMatFETIDPGetRHS(Mat fetidp_mat, Vec standard_rhs, Vec fetidp_flux_rhs)
23393425bc38SStefano Zampini {
2340674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
23413425bc38SStefano Zampini   PetscErrorCode ierr;
23423425bc38SStefano Zampini 
23433425bc38SStefano Zampini   PetscFunctionBegin;
2344266e20e9SStefano Zampini   PetscValidHeaderSpecific(fetidp_mat,MAT_CLASSID,1);
2345266e20e9SStefano Zampini   PetscValidHeaderSpecific(standard_rhs,VEC_CLASSID,2);
2346266e20e9SStefano Zampini   PetscValidHeaderSpecific(fetidp_flux_rhs,VEC_CLASSID,3);
23473425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
2348163d334eSBarry Smith   ierr = PetscUseMethod(mat_ctx->pc,"PCBDDCMatFETIDPGetRHS_C",(Mat,Vec,Vec),(fetidp_mat,standard_rhs,fetidp_flux_rhs));CHKERRQ(ierr);
23493425bc38SStefano Zampini   PetscFunctionReturn(0);
23503425bc38SStefano Zampini }
23511e6b0712SBarry Smith 
23523425bc38SStefano Zampini static PetscErrorCode PCBDDCMatFETIDPGetSolution_BDDC(Mat fetidp_mat, Vec fetidp_flux_sol, Vec standard_sol)
23533425bc38SStefano Zampini {
2354674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
23553425bc38SStefano Zampini   PC_IS*         pcis;
23563425bc38SStefano Zampini   PC_BDDC*       pcbddc;
23573425bc38SStefano Zampini   PetscErrorCode ierr;
2358229984c5Sstefano_zampini   Vec            work;
23593425bc38SStefano Zampini 
23603425bc38SStefano Zampini   PetscFunctionBegin;
23613425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
23623425bc38SStefano Zampini   pcis = (PC_IS*)mat_ctx->pc->data;
23633425bc38SStefano Zampini   pcbddc = (PC_BDDC*)mat_ctx->pc->data;
23643425bc38SStefano Zampini 
23653425bc38SStefano Zampini   /* apply B_delta^T */
2366af140850Sstefano_zampini   ierr = VecSet(pcis->vec1_B,0.);CHKERRQ(ierr);
23673425bc38SStefano Zampini   ierr = VecScatterBegin(mat_ctx->l2g_lambda,fetidp_flux_sol,mat_ctx->lambda_local,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
23683425bc38SStefano Zampini   ierr = VecScatterEnd(mat_ctx->l2g_lambda,fetidp_flux_sol,mat_ctx->lambda_local,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
23693425bc38SStefano Zampini   ierr = MatMultTranspose(mat_ctx->B_delta,mat_ctx->lambda_local,pcis->vec1_B);CHKERRQ(ierr);
2370229984c5Sstefano_zampini   if (mat_ctx->l2g_p) {
2371229984c5Sstefano_zampini     ierr = VecScatterBegin(mat_ctx->l2g_p,fetidp_flux_sol,mat_ctx->vP,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2372229984c5Sstefano_zampini     ierr = VecScatterEnd(mat_ctx->l2g_p,fetidp_flux_sol,mat_ctx->vP,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2373229984c5Sstefano_zampini     ierr = MatMultAdd(mat_ctx->Bt_BB,mat_ctx->vP,pcis->vec1_B,pcis->vec1_B);CHKERRQ(ierr);
2374229984c5Sstefano_zampini   }
2375229984c5Sstefano_zampini 
23763425bc38SStefano Zampini   /* compute rhs for BDDC application */
23773425bc38SStefano Zampini   ierr = VecAYPX(pcis->vec1_B,-1.0,mat_ctx->temp_solution_B);CHKERRQ(ierr);
23788eeda7d8SStefano Zampini   if (pcbddc->switch_static) {
23793425bc38SStefano Zampini     ierr = VecCopy(mat_ctx->temp_solution_D,pcis->vec1_D);CHKERRQ(ierr);
2380229984c5Sstefano_zampini     if (mat_ctx->l2g_p) {
2381229984c5Sstefano_zampini       ierr = VecScale(mat_ctx->vP,-1.);CHKERRQ(ierr);
2382229984c5Sstefano_zampini       ierr = MatMultAdd(mat_ctx->Bt_BI,mat_ctx->vP,pcis->vec1_D,pcis->vec1_D);CHKERRQ(ierr);
23833425bc38SStefano Zampini     }
2384229984c5Sstefano_zampini   }
2385229984c5Sstefano_zampini 
23863425bc38SStefano Zampini   /* apply BDDC */
2387229984c5Sstefano_zampini   ierr = PetscMemzero(pcbddc->benign_p0,pcbddc->benign_n*sizeof(PetscScalar));CHKERRQ(ierr);
2388dc359a40SStefano Zampini   ierr = PCBDDCApplyInterfacePreconditioner(mat_ctx->pc,PETSC_FALSE);CHKERRQ(ierr);
2389229984c5Sstefano_zampini 
2390229984c5Sstefano_zampini   /* put values into global vector */
2391af140850Sstefano_zampini   if (pcbddc->ChangeOfBasisMatrix) work = pcbddc->work_change;
2392af140850Sstefano_zampini   else work = standard_sol;
2393229984c5Sstefano_zampini   ierr = VecScatterBegin(pcis->global_to_B,pcis->vec1_B,work,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2394229984c5Sstefano_zampini   ierr = VecScatterEnd(pcis->global_to_B,pcis->vec1_B,work,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
23958eeda7d8SStefano Zampini   if (!pcbddc->switch_static) {
23963425bc38SStefano Zampini     /* compute values into the interior if solved for the partially subassembled Schur complement */
23973425bc38SStefano Zampini     ierr = MatMult(pcis->A_IB,pcis->vec1_B,pcis->vec1_D);CHKERRQ(ierr);
239800f6b531SStefano Zampini     ierr = VecAYPX(pcis->vec1_D,-1.0,mat_ctx->temp_solution_D);CHKERRQ(ierr);
239900f6b531SStefano Zampini     ierr = KSPSolve(pcbddc->ksp_D,pcis->vec1_D,pcis->vec1_D);CHKERRQ(ierr);
24003425bc38SStefano Zampini   }
2401229984c5Sstefano_zampini 
2402229984c5Sstefano_zampini   ierr = VecScatterBegin(pcis->global_to_D,pcis->vec1_D,work,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2403229984c5Sstefano_zampini   ierr = VecScatterEnd(pcis->global_to_D,pcis->vec1_D,work,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2404266e20e9SStefano Zampini   /* add p0 solution to final solution */
2405229984c5Sstefano_zampini   ierr = PCBDDCBenignGetOrSetP0(mat_ctx->pc,work,PETSC_FALSE);CHKERRQ(ierr);
2406fc17d649SStefano Zampini   if (pcbddc->ChangeOfBasisMatrix) {
2407af140850Sstefano_zampini     ierr = MatMult(pcbddc->ChangeOfBasisMatrix,work,standard_sol);CHKERRQ(ierr);
2408fc17d649SStefano Zampini   }
2409af140850Sstefano_zampini   ierr = PCPostSolve_BDDC(mat_ctx->pc,NULL,NULL,standard_sol);CHKERRQ(ierr);
2410af140850Sstefano_zampini   if (mat_ctx->g2g_p) {
2411229984c5Sstefano_zampini     ierr = VecScatterBegin(mat_ctx->g2g_p,fetidp_flux_sol,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2412229984c5Sstefano_zampini     ierr = VecScatterEnd(mat_ctx->g2g_p,fetidp_flux_sol,standard_sol,INSERT_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
2413229984c5Sstefano_zampini   }
24143425bc38SStefano Zampini   PetscFunctionReturn(0);
24153425bc38SStefano Zampini }
24161e6b0712SBarry Smith 
24173425bc38SStefano Zampini /*@
24180f202f7eSStefano Zampini  PCBDDCMatFETIDPGetSolution - Compute the physical solution using the solution of the FETI-DP linear system
24193425bc38SStefano Zampini 
24203425bc38SStefano Zampini    Collective
24213425bc38SStefano Zampini 
24223425bc38SStefano Zampini    Input Parameters:
24230f202f7eSStefano Zampini +  fetidp_mat      - the FETI-DP matrix obtained by a call to PCBDDCCreateFETIDPOperators
24240f202f7eSStefano Zampini -  fetidp_flux_sol - the solution of the FETI-DP linear system
24253425bc38SStefano Zampini 
24263425bc38SStefano Zampini    Output Parameters:
24270f202f7eSStefano Zampini .  standard_sol    - the solution defined on the physical domain
24283425bc38SStefano Zampini 
24293425bc38SStefano Zampini    Level: developer
24303425bc38SStefano Zampini 
24313425bc38SStefano Zampini    Notes:
24323425bc38SStefano Zampini 
24330f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCCreateFETIDPOperators, PCBDDCMatFETIDPGetRHS
24343425bc38SStefano Zampini @*/
24353425bc38SStefano Zampini PetscErrorCode PCBDDCMatFETIDPGetSolution(Mat fetidp_mat, Vec fetidp_flux_sol, Vec standard_sol)
24363425bc38SStefano Zampini {
2437674ae819SStefano Zampini   FETIDPMat_ctx  mat_ctx;
24383425bc38SStefano Zampini   PetscErrorCode ierr;
24393425bc38SStefano Zampini 
24403425bc38SStefano Zampini   PetscFunctionBegin;
2441266e20e9SStefano Zampini   PetscValidHeaderSpecific(fetidp_mat,MAT_CLASSID,1);
2442266e20e9SStefano Zampini   PetscValidHeaderSpecific(fetidp_flux_sol,VEC_CLASSID,2);
2443266e20e9SStefano Zampini   PetscValidHeaderSpecific(standard_sol,VEC_CLASSID,3);
24443425bc38SStefano Zampini   ierr = MatShellGetContext(fetidp_mat,&mat_ctx);CHKERRQ(ierr);
2445163d334eSBarry Smith   ierr = PetscUseMethod(mat_ctx->pc,"PCBDDCMatFETIDPGetSolution_C",(Mat,Vec,Vec),(fetidp_mat,fetidp_flux_sol,standard_sol));CHKERRQ(ierr);
24463425bc38SStefano Zampini   PetscFunctionReturn(0);
24473425bc38SStefano Zampini }
24481e6b0712SBarry Smith 
2449547c9a8eSstefano_zampini static PetscErrorCode PCBDDCCreateFETIDPOperators_BDDC(PC pc, PetscBool fully_redundant, const char* prefix, Mat *fetidp_mat, PC *fetidp_pc)
24503425bc38SStefano Zampini {
2451674ae819SStefano Zampini 
2452674ae819SStefano Zampini   FETIDPMat_ctx  fetidpmat_ctx;
24533425bc38SStefano Zampini   Mat            newmat;
2454674ae819SStefano Zampini   FETIDPPC_ctx   fetidppc_ctx;
24553425bc38SStefano Zampini   PC             newpc;
2456ce94432eSBarry Smith   MPI_Comm       comm;
24573425bc38SStefano Zampini   PetscErrorCode ierr;
24583425bc38SStefano Zampini 
24593425bc38SStefano Zampini   PetscFunctionBegin;
2460ce94432eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)pc,&comm);CHKERRQ(ierr);
246115579a77SStefano Zampini   /* FETI-DP matrix */
24623425bc38SStefano Zampini   ierr = PCBDDCCreateFETIDPMatContext(pc,&fetidpmat_ctx);CHKERRQ(ierr);
24631720468bSStefano Zampini   fetidpmat_ctx->fully_redundant = fully_redundant;
24643425bc38SStefano Zampini   ierr = PCBDDCSetupFETIDPMatContext(fetidpmat_ctx);CHKERRQ(ierr);
2465a5bb87b3Sstefano_zampini   ierr = MatCreateShell(comm,fetidpmat_ctx->n,fetidpmat_ctx->n,fetidpmat_ctx->N,fetidpmat_ctx->N,fetidpmat_ctx,&newmat);CHKERRQ(ierr);
246615579a77SStefano Zampini   ierr = PetscObjectSetName((PetscObject)newmat,!fetidpmat_ctx->l2g_lambda_only ? "F" : "G");CHKERRQ(ierr);
24673425bc38SStefano Zampini   ierr = MatShellSetOperation(newmat,MATOP_MULT,(void (*)(void))FETIDPMatMult);CHKERRQ(ierr);
2468edf7251bSStefano Zampini   ierr = MatShellSetOperation(newmat,MATOP_MULT_TRANSPOSE,(void (*)(void))FETIDPMatMultTranspose);CHKERRQ(ierr);
24693425bc38SStefano Zampini   ierr = MatShellSetOperation(newmat,MATOP_DESTROY,(void (*)(void))PCBDDCDestroyFETIDPMat);CHKERRQ(ierr);
247015579a77SStefano Zampini   /* propagate MatOptions */
247115579a77SStefano Zampini   {
247215579a77SStefano Zampini     PC_BDDC   *pcbddc = (PC_BDDC*)fetidpmat_ctx->pc->data;
247315579a77SStefano Zampini     PetscBool issym;
247415579a77SStefano Zampini 
247515579a77SStefano Zampini     ierr = MatGetOption(pc->mat,MAT_SYMMETRIC,&issym);CHKERRQ(ierr);
247615579a77SStefano Zampini     if (issym || pcbddc->symmetric_primal) {
247715579a77SStefano Zampini       ierr = MatSetOption(newmat,MAT_SYMMETRIC,PETSC_TRUE);CHKERRQ(ierr);
247815579a77SStefano Zampini     }
247915579a77SStefano Zampini   }
2480547c9a8eSstefano_zampini   ierr = MatSetOptionsPrefix(newmat,prefix);CHKERRQ(ierr);
2481547c9a8eSstefano_zampini   ierr = MatAppendOptionsPrefix(newmat,"fetidp_");CHKERRQ(ierr);
24823425bc38SStefano Zampini   ierr = MatSetUp(newmat);CHKERRQ(ierr);
248315579a77SStefano Zampini   /* FETI-DP preconditioner */
24843425bc38SStefano Zampini   ierr = PCBDDCCreateFETIDPPCContext(pc,&fetidppc_ctx);CHKERRQ(ierr);
24853425bc38SStefano Zampini   ierr = PCBDDCSetupFETIDPPCContext(newmat,fetidppc_ctx);CHKERRQ(ierr);
24863425bc38SStefano Zampini   ierr = PCCreate(comm,&newpc);CHKERRQ(ierr);
2487e1214c54Sstefano_zampini   ierr = PCSetOperators(newpc,newmat,newmat);CHKERRQ(ierr);
2488e1214c54Sstefano_zampini   ierr = PCSetOptionsPrefix(newpc,prefix);CHKERRQ(ierr);
2489e1214c54Sstefano_zampini   ierr = PCAppendOptionsPrefix(newpc,"fetidp_");CHKERRQ(ierr);
2490399ffe99SStefano Zampini   ierr = PCSetErrorIfFailure(newpc,pc->erroriffailure);CHKERRQ(ierr);
249115579a77SStefano Zampini   if (!fetidpmat_ctx->l2g_lambda_only) { /* standard FETI-DP */
24923425bc38SStefano Zampini     ierr = PCSetType(newpc,PCSHELL);CHKERRQ(ierr);
249315579a77SStefano Zampini     ierr = PCShellSetName(newpc,"FETI-DP multipliers");CHKERRQ(ierr);
24943425bc38SStefano Zampini     ierr = PCShellSetContext(newpc,fetidppc_ctx);CHKERRQ(ierr);
24953425bc38SStefano Zampini     ierr = PCShellSetApply(newpc,FETIDPPCApply);CHKERRQ(ierr);
2496edf7251bSStefano Zampini     ierr = PCShellSetApplyTranspose(newpc,FETIDPPCApplyTranspose);CHKERRQ(ierr);
2497c45b8d2dSstefano_zampini     ierr = PCShellSetView(newpc,FETIDPPCView);CHKERRQ(ierr);
24983425bc38SStefano Zampini     ierr = PCShellSetDestroy(newpc,PCBDDCDestroyFETIDPPC);CHKERRQ(ierr);
2499e1214c54Sstefano_zampini   } else {
2500e1214c54Sstefano_zampini     KSP      *ksps;
2501e1214c54Sstefano_zampini     PC       lagpc;
2502e1214c54Sstefano_zampini     Mat      M,AM,PM;
2503e1214c54Sstefano_zampini     PetscInt nn;
2504e1214c54Sstefano_zampini 
250515579a77SStefano Zampini     ierr = ISViewFromOptions(fetidpmat_ctx->lagrange,NULL,"-lag_view");CHKERRQ(ierr);
250615579a77SStefano Zampini     ierr = ISViewFromOptions(fetidpmat_ctx->pressure,NULL,"-press_view");CHKERRQ(ierr);
2507e1214c54Sstefano_zampini     ierr = PetscObjectQuery((PetscObject)pc,"__KSPFETIDP_PPmat",(PetscObject*)&M);CHKERRQ(ierr);
2508e1214c54Sstefano_zampini     ierr = PCSetType(newpc,PCFIELDSPLIT);CHKERRQ(ierr);
2509e1214c54Sstefano_zampini     ierr = PCFieldSplitSetIS(newpc,"lag",fetidpmat_ctx->lagrange);CHKERRQ(ierr);
2510e1214c54Sstefano_zampini     ierr = PCFieldSplitSetIS(newpc,"p",fetidpmat_ctx->pressure);CHKERRQ(ierr);
2511e1214c54Sstefano_zampini     ierr = PCFieldSplitSetType(newpc,PC_COMPOSITE_SCHUR);CHKERRQ(ierr);
251240c75d76SStefano Zampini     ierr = PCFieldSplitSetSchurFactType(newpc,PC_FIELDSPLIT_SCHUR_FACT_DIAG);CHKERRQ(ierr);
2513e1214c54Sstefano_zampini     ierr = PCFieldSplitSetSchurPre(newpc,PC_FIELDSPLIT_SCHUR_PRE_USER,M);CHKERRQ(ierr);
2514c096484dSStefano Zampini     ierr = PCFieldSplitSetSchurScale(newpc,1.0);CHKERRQ(ierr);
251515579a77SStefano Zampini 
251615579a77SStefano Zampini     /* we need to setfromoptions and setup here to access the blocks */
2517e1214c54Sstefano_zampini     ierr = PCSetFromOptions(newpc);CHKERRQ(ierr);
2518e1214c54Sstefano_zampini     ierr = PCSetUp(newpc);CHKERRQ(ierr);
2519e1214c54Sstefano_zampini 
2520e1214c54Sstefano_zampini     /* set the solver for the (0,0) block */
252140c75d76SStefano Zampini     ierr = PCFieldSplitGetSubKSP(newpc,&nn,&ksps);CHKERRQ(ierr);
2522e1214c54Sstefano_zampini     ierr = PCCreate(comm,&lagpc);CHKERRQ(ierr);
2523e1214c54Sstefano_zampini     ierr = PCSetType(lagpc,PCSHELL);CHKERRQ(ierr);
2524e1214c54Sstefano_zampini     ierr = KSPGetOperators(ksps[0],&AM,&PM);CHKERRQ(ierr);
2525e1214c54Sstefano_zampini     ierr = PCSetOperators(lagpc,AM,PM);CHKERRQ(ierr);
2526e1214c54Sstefano_zampini     ierr = PCShellSetContext(lagpc,fetidppc_ctx);CHKERRQ(ierr);
2527e1214c54Sstefano_zampini     ierr = PCShellSetApply(lagpc,FETIDPPCApply);CHKERRQ(ierr);
2528e1214c54Sstefano_zampini     ierr = PCShellSetApplyTranspose(lagpc,FETIDPPCApplyTranspose);CHKERRQ(ierr);
2529e1214c54Sstefano_zampini     ierr = PCShellSetView(lagpc,FETIDPPCView);CHKERRQ(ierr);
2530e1214c54Sstefano_zampini     ierr = PCShellSetDestroy(lagpc,PCBDDCDestroyFETIDPPC);CHKERRQ(ierr);
2531e1214c54Sstefano_zampini     ierr = KSPSetPC(ksps[0],lagpc);CHKERRQ(ierr);
253215579a77SStefano Zampini     ierr = PetscObjectIncrementTabLevel((PetscObject)lagpc,(PetscObject)ksps[0],0);CHKERRQ(ierr);
2533e1214c54Sstefano_zampini     ierr = PCDestroy(&lagpc);CHKERRQ(ierr);
2534e1214c54Sstefano_zampini     ierr = PetscFree(ksps);CHKERRQ(ierr);
2535e1214c54Sstefano_zampini   }
25363425bc38SStefano Zampini   /* return pointers for objects created */
25373425bc38SStefano Zampini   *fetidp_mat = newmat;
25383425bc38SStefano Zampini   *fetidp_pc  = newpc;
25393425bc38SStefano Zampini   PetscFunctionReturn(0);
25403425bc38SStefano Zampini }
25411e6b0712SBarry Smith 
254294ef8ddeSSatish Balay /*@C
25430f202f7eSStefano Zampini  PCBDDCCreateFETIDPOperators - Create FETI-DP operators
25443425bc38SStefano Zampini 
25453425bc38SStefano Zampini    Collective
25463425bc38SStefano Zampini 
25473425bc38SStefano Zampini    Input Parameters:
25481720468bSStefano Zampini +  pc - the BDDC preconditioning context (setup should have been called before)
2549547c9a8eSstefano_zampini .  fully_redundant - true for a fully redundant set of Lagrange multipliers
2550547c9a8eSstefano_zampini -  prefix - optional options database prefix for the objects to be created (can be NULL)
255128509bceSStefano Zampini 
255228509bceSStefano Zampini    Output Parameters:
25530f202f7eSStefano Zampini +  fetidp_mat - shell FETI-DP matrix object
25540f202f7eSStefano Zampini -  fetidp_pc  - shell Dirichlet preconditioner for FETI-DP matrix
255528509bceSStefano Zampini 
25563425bc38SStefano Zampini    Level: developer
25573425bc38SStefano Zampini 
25583425bc38SStefano Zampini    Notes:
25590f202f7eSStefano Zampini      Currently the only operations provided for FETI-DP matrix are MatMult and MatMultTranspose
25603425bc38SStefano Zampini 
25610f202f7eSStefano Zampini .seealso: PCBDDC, PCBDDCMatFETIDPGetRHS, PCBDDCMatFETIDPGetSolution
25623425bc38SStefano Zampini @*/
2563547c9a8eSstefano_zampini PetscErrorCode PCBDDCCreateFETIDPOperators(PC pc, PetscBool fully_redundant, const char *prefix, Mat *fetidp_mat, PC *fetidp_pc)
25643425bc38SStefano Zampini {
25653425bc38SStefano Zampini   PetscErrorCode ierr;
25663425bc38SStefano Zampini 
25673425bc38SStefano Zampini   PetscFunctionBegin;
25683425bc38SStefano Zampini   PetscValidHeaderSpecific(pc,PC_CLASSID,1);
25693425bc38SStefano Zampini   if (pc->setupcalled) {
2570547c9a8eSstefano_zampini     ierr = PetscUseMethod(pc,"PCBDDCCreateFETIDPOperators_C",(PC,PetscBool,const char*,Mat*,PC*),(pc,fully_redundant,prefix,fetidp_mat,fetidp_pc));CHKERRQ(ierr);
25714247aa23Sstefano_zampini   } else SETERRQ(PetscObjectComm((PetscObject)pc),PETSC_ERR_SUP,"You must call PCSetup_BDDC() first \n");
25723425bc38SStefano Zampini   PetscFunctionReturn(0);
25733425bc38SStefano Zampini }
25740c7d97c5SJed Brown /* -------------------------------------------------------------------------- */
2575da1bb401SStefano Zampini /*MC
2576da1bb401SStefano Zampini    PCBDDC - Balancing Domain Decomposition by Constraints.
25770c7d97c5SJed Brown 
257828509bceSStefano Zampini    An implementation of the BDDC preconditioner based on
257928509bceSStefano Zampini 
258028509bceSStefano Zampini .vb
258128509bceSStefano Zampini    [1] C. R. Dohrmann. "An approximate BDDC preconditioner", Numerical Linear Algebra with Applications Volume 14, Issue 2, pages 149-168, March 2007
258228509bceSStefano Zampini    [2] A. Klawonn and O. B. Widlund. "Dual-Primal FETI Methods for Linear Elasticity", http://cs.nyu.edu/csweb/Research/TechReports/TR2004-855/TR2004-855.pdf
258328509bceSStefano Zampini    [3] J. Mandel, B. Sousedik, C. R. Dohrmann. "Multispace and Multilevel BDDC", http://arxiv.org/abs/0712.3977
25840f202f7eSStefano Zampini    [4] C. Pechstein and C. R. Dohrmann. "Modern domain decomposition methods BDDC, deluxe scaling, and an algebraic approach", Seminar talk, Linz, December 2013, http://people.ricam.oeaw.ac.at/c.pechstein/pechstein-bddc2013.pdf
258528509bceSStefano Zampini .ve
258628509bceSStefano Zampini 
258728509bceSStefano Zampini    The matrix to be preconditioned (Pmat) must be of type MATIS.
258828509bceSStefano Zampini 
25890f202f7eSStefano Zampini    Currently works with MATIS matrices with local matrices of type MATSEQAIJ, MATSEQBAIJ or MATSEQSBAIJ, either with real or complex numbers.
259028509bceSStefano Zampini 
259128509bceSStefano Zampini    It also works with unsymmetric and indefinite problems.
259228509bceSStefano Zampini 
2593b6fdb6dfSStefano Zampini    Unlike 'conventional' interface preconditioners, PCBDDC iterates over all degrees of freedom, not just those on the interface. This allows the use of approximate solvers on the subdomains.
2594b6fdb6dfSStefano Zampini 
2595c7017625SStefano Zampini    Approximate local solvers are automatically adapted (see [1]) if the user has attached a nullspace object to the subdomain matrices, and informed BDDC of using approximate solvers (via the command line).
259628509bceSStefano Zampini 
25970f202f7eSStefano Zampini    Boundary nodes are split in vertices, edges and faces classes using information from the local to global mapping of dofs and the local connectivity graph of nodes. The latter can be customized by using PCBDDCSetLocalAdjacencyGraph()
259830368db7SStefano Zampini    Additional information on dofs can be provided by using PCBDDCSetDofsSplitting(), PCBDDCSetDirichletBoundaries(), PCBDDCSetNeumannBoundaries(), and PCBDDCSetPrimalVerticesIS() and their local counterparts.
259928509bceSStefano Zampini 
26000f202f7eSStefano Zampini    Constraints can be customized by attaching a MatNullSpace object to the MATIS matrix via MatSetNearNullSpace(). Non-singular modes are retained via SVD.
260128509bceSStefano Zampini 
26020f202f7eSStefano Zampini    Change of basis is performed similarly to [2] when requested. When more than one constraint is present on a single connected component (i.e. an edge or a face), a robust method based on local QR factorizations is used.
26030f202f7eSStefano Zampini    User defined change of basis can be passed to PCBDDC by using PCBDDCSetChangeOfBasisMat()
260428509bceSStefano Zampini 
26050f202f7eSStefano Zampini    The PETSc implementation also supports multilevel BDDC [3]. Coarse grids are partitioned using a MatPartitioning object.
260628509bceSStefano Zampini 
2607df4d28bfSStefano Zampini    Adaptive selection of primal constraints [4] is supported for SPD systems with high-contrast in the coefficients if MUMPS or MKL_PARDISO are present. Future versions of the code will also consider using PASTIX.
260828509bceSStefano Zampini 
26090f202f7eSStefano Zampini    An experimental interface to the FETI-DP method is available. FETI-DP operators could be created using PCBDDCCreateFETIDPOperators(). A stand-alone class for the FETI-DP method will be provided in the next releases.
26100f202f7eSStefano Zampini    Deluxe scaling is not supported yet for FETI-DP.
26110f202f7eSStefano Zampini 
26120f202f7eSStefano Zampini    Options Database Keys (some of them, run with -h for a complete list):
26130f202f7eSStefano Zampini 
26140f202f7eSStefano Zampini .    -pc_bddc_use_vertices <true> - use or not vertices in primal space
26150f202f7eSStefano Zampini .    -pc_bddc_use_edges <true> - use or not edges in primal space
26160f202f7eSStefano Zampini .    -pc_bddc_use_faces <false> - use or not faces in primal space
26170f202f7eSStefano Zampini .    -pc_bddc_symmetric <true> - symmetric computation of primal basis functions. Specify false for unsymmetric problems
26180f202f7eSStefano Zampini .    -pc_bddc_use_change_of_basis <false> - use change of basis approach (on edges only)
26190f202f7eSStefano Zampini .    -pc_bddc_use_change_on_faces <false> - use change of basis approach on faces if change of basis has been requested
26200f202f7eSStefano Zampini .    -pc_bddc_switch_static <false> - switches from M_2 (default) to M_3 operator (see reference article [1])
262128509bceSStefano Zampini .    -pc_bddc_levels <0> - maximum number of levels for multilevel
26220f202f7eSStefano Zampini .    -pc_bddc_coarsening_ratio <8> - number of subdomains which will be aggregated together at the coarser level (e.g. H/h ratio at the coarser level, significative only in the multilevel case)
26235459c157SBarry Smith .    -pc_bddc_coarse_redistribute <0> - size of a subset of processors where the coarse problem will be remapped (the value is ignored if not at the coarsest level)
26240f202f7eSStefano Zampini .    -pc_bddc_use_deluxe_scaling <false> - use deluxe scaling
26250f202f7eSStefano Zampini .    -pc_bddc_schur_layers <-1> - select the economic version of deluxe scaling by specifying the number of layers (-1 corresponds to the original deluxe scaling)
2626bd2a564bSStefano Zampini .    -pc_bddc_adaptive_threshold <0.0> - when a value different than zero is specified, adaptive selection of constraints is performed on edges and faces (requires deluxe scaling and MUMPS or MKL_PARDISO installed)
262728509bceSStefano Zampini -    -pc_bddc_check_level <0> - set verbosity level of debugging output
262828509bceSStefano Zampini 
262928509bceSStefano Zampini    Options for Dirichlet, Neumann or coarse solver can be set with
263028509bceSStefano Zampini .vb
263128509bceSStefano Zampini       -pc_bddc_dirichlet_
263228509bceSStefano Zampini       -pc_bddc_neumann_
263328509bceSStefano Zampini       -pc_bddc_coarse_
263428509bceSStefano Zampini .ve
26350f202f7eSStefano Zampini    e.g -pc_bddc_dirichlet_ksp_type richardson -pc_bddc_dirichlet_pc_type gamg. PCBDDC uses by default KPSPREONLY and PCLU.
263628509bceSStefano Zampini 
26370f202f7eSStefano Zampini    When using a multilevel approach, solvers' options at the N-th level (N > 1) can be specified as
263828509bceSStefano Zampini .vb
2639312be037SStefano Zampini       -pc_bddc_dirichlet_lN_
2640312be037SStefano Zampini       -pc_bddc_neumann_lN_
2641312be037SStefano Zampini       -pc_bddc_coarse_lN_
264228509bceSStefano Zampini .ve
26430f202f7eSStefano Zampini    Note that level number ranges from the finest (0) to the coarsest (N).
26440f202f7eSStefano Zampini    In order to specify options for the BDDC operators at the coarser levels (and not for the solvers), prepend -pc_bddc_coarse_ or -pc_bddc_coarse_l to the option, e.g.
26450f202f7eSStefano Zampini .vb
26460f202f7eSStefano Zampini      -pc_bddc_coarse_pc_bddc_adaptive_threshold 5 -pc_bddc_coarse_l1_pc_bddc_redistribute 3
26470f202f7eSStefano Zampini .ve
26480f202f7eSStefano Zampini    will use a threshold of 5 for constraints' selection at the first coarse level and will redistribute the coarse problem of the first coarse level on 3 processors
2649da1bb401SStefano Zampini 
2650da1bb401SStefano Zampini    Level: intermediate
2651da1bb401SStefano Zampini 
2652e94cfbe0SPatrick Sanan    Developer Notes:
2653da1bb401SStefano Zampini 
2654da1bb401SStefano Zampini    Contributed by Stefano Zampini
2655da1bb401SStefano Zampini 
2656da1bb401SStefano Zampini .seealso:  PCCreate(), PCSetType(), PCType (for list of available types), PC,  MATIS
2657da1bb401SStefano Zampini M*/
2658b2573a8aSBarry Smith 
26598cc058d9SJed Brown PETSC_EXTERN PetscErrorCode PCCreate_BDDC(PC pc)
2660da1bb401SStefano Zampini {
2661da1bb401SStefano Zampini   PetscErrorCode      ierr;
2662da1bb401SStefano Zampini   PC_BDDC             *pcbddc;
2663da1bb401SStefano Zampini 
2664da1bb401SStefano Zampini   PetscFunctionBegin;
2665b00a9115SJed Brown   ierr     = PetscNewLog(pc,&pcbddc);CHKERRQ(ierr);
2666da1bb401SStefano Zampini   pc->data = (void*)pcbddc;
2667da1bb401SStefano Zampini 
2668da1bb401SStefano Zampini   /* create PCIS data structure */
2669da1bb401SStefano Zampini   ierr = PCISCreate(pc);CHKERRQ(ierr);
2670da1bb401SStefano Zampini 
26719326c5c6Sstefano_zampini   /* create local graph structure */
26729326c5c6Sstefano_zampini   ierr = PCBDDCGraphCreate(&pcbddc->mat_graph);CHKERRQ(ierr);
26739326c5c6Sstefano_zampini 
26749326c5c6Sstefano_zampini   /* BDDC nonzero defaults */
267508a5cf49SStefano Zampini   pcbddc->use_local_adj             = PETSC_TRUE;
267647d04d0dSStefano Zampini   pcbddc->use_vertices              = PETSC_TRUE;
267747d04d0dSStefano Zampini   pcbddc->use_edges                 = PETSC_TRUE;
26783301b35fSStefano Zampini   pcbddc->symmetric_primal          = PETSC_TRUE;
267914f95afaSStefano Zampini   pcbddc->vertex_size               = 1;
2680c703fcc7SStefano Zampini   pcbddc->recompute_topography      = PETSC_TRUE;
268168457ee5SStefano Zampini   pcbddc->coarse_size               = -1;
268285c4d303SStefano Zampini   pcbddc->use_exact_dirichlet_trick = PETSC_TRUE;
268347d04d0dSStefano Zampini   pcbddc->coarsening_ratio          = 8;
268457de7509SStefano Zampini   pcbddc->coarse_eqs_per_proc       = 1;
268527b6a85dSStefano Zampini   pcbddc->benign_compute_correction = PETSC_TRUE;
26861e0482f5SStefano Zampini   pcbddc->nedfield                  = -1;
26871e0482f5SStefano Zampini   pcbddc->nedglobal                 = PETSC_TRUE;
2688be12c134Sstefano_zampini   pcbddc->graphmaxcount             = PETSC_MAX_INT;
2689b96c3477SStefano Zampini   pcbddc->sub_schurs_layers         = -1;
2690bd2a564bSStefano Zampini   pcbddc->adaptive_threshold[0]     = 0.0;
2691bd2a564bSStefano Zampini   pcbddc->adaptive_threshold[1]     = 0.0;
2692b7eb3628SStefano Zampini 
2693da1bb401SStefano Zampini   /* function pointers */
2694da1bb401SStefano Zampini   pc->ops->apply               = PCApply_BDDC;
269593bd9ae7SStefano Zampini   pc->ops->applytranspose      = PCApplyTranspose_BDDC;
2696da1bb401SStefano Zampini   pc->ops->setup               = PCSetUp_BDDC;
2697da1bb401SStefano Zampini   pc->ops->destroy             = PCDestroy_BDDC;
2698da1bb401SStefano Zampini   pc->ops->setfromoptions      = PCSetFromOptions_BDDC;
26996b78500eSPatrick Sanan   pc->ops->view                = PCView_BDDC;
2700da1bb401SStefano Zampini   pc->ops->applyrichardson     = 0;
2701da1bb401SStefano Zampini   pc->ops->applysymmetricleft  = 0;
2702da1bb401SStefano Zampini   pc->ops->applysymmetricright = 0;
2703534831adSStefano Zampini   pc->ops->presolve            = PCPreSolve_BDDC;
2704534831adSStefano Zampini   pc->ops->postsolve           = PCPostSolve_BDDC;
27059326c5c6Sstefano_zampini   pc->ops->reset               = PCReset_BDDC;
2706da1bb401SStefano Zampini 
2707da1bb401SStefano Zampini   /* composing function */
2708a13144ffSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDiscreteGradient_C",PCBDDCSetDiscreteGradient_BDDC);CHKERRQ(ierr);
2709a198735bSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDivergenceMat_C",PCBDDCSetDivergenceMat_BDDC);CHKERRQ(ierr);
2710906d46d4SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetChangeOfBasisMat_C",PCBDDCSetChangeOfBasisMat_BDDC);CHKERRQ(ierr);
2711674ae819SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetPrimalVerticesLocalIS_C",PCBDDCSetPrimalVerticesLocalIS_BDDC);CHKERRQ(ierr);
271230368db7SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetPrimalVerticesIS_C",PCBDDCSetPrimalVerticesIS_BDDC);CHKERRQ(ierr);
2713bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetCoarseningRatio_C",PCBDDCSetCoarseningRatio_BDDC);CHKERRQ(ierr);
27142b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevel_C",PCBDDCSetLevel_BDDC);CHKERRQ(ierr);
2715b8ffe317SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetUseExactDirichlet_C",PCBDDCSetUseExactDirichlet_BDDC);CHKERRQ(ierr);
27162b510759SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLevels_C",PCBDDCSetLevels_BDDC);CHKERRQ(ierr);
2717bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundaries_C",PCBDDCSetDirichletBoundaries_BDDC);CHKERRQ(ierr);
271882ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDirichletBoundariesLocal_C",PCBDDCSetDirichletBoundariesLocal_BDDC);CHKERRQ(ierr);
2719bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundaries_C",PCBDDCSetNeumannBoundaries_BDDC);CHKERRQ(ierr);
272082ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetNeumannBoundariesLocal_C",PCBDDCSetNeumannBoundariesLocal_BDDC);CHKERRQ(ierr);
2721bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundaries_C",PCBDDCGetDirichletBoundaries_BDDC);CHKERRQ(ierr);
272282ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetDirichletBoundariesLocal_C",PCBDDCGetDirichletBoundariesLocal_BDDC);CHKERRQ(ierr);
2723bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundaries_C",PCBDDCGetNeumannBoundaries_BDDC);CHKERRQ(ierr);
272482ba6b80SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCGetNeumannBoundariesLocal_C",PCBDDCGetNeumannBoundariesLocal_BDDC);CHKERRQ(ierr);
2725bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplitting_C",PCBDDCSetDofsSplitting_BDDC);CHKERRQ(ierr);
272663602bcaSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetDofsSplittingLocal_C",PCBDDCSetDofsSplittingLocal_BDDC);CHKERRQ(ierr);
2727bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCSetLocalAdjacencyGraph_C",PCBDDCSetLocalAdjacencyGraph_BDDC);CHKERRQ(ierr);
2728bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCCreateFETIDPOperators_C",PCBDDCCreateFETIDPOperators_BDDC);CHKERRQ(ierr);
2729bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetRHS_C",PCBDDCMatFETIDPGetRHS_BDDC);CHKERRQ(ierr);
2730bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCBDDCMatFETIDPGetSolution_C",PCBDDCMatFETIDPGetSolution_BDDC);CHKERRQ(ierr);
2731a06fd7f2SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCPreSolveChangeRHS_C",PCPreSolveChangeRHS_BDDC);CHKERRQ(ierr);
2732ab8c8b98SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)pc,"PCSetCoordinates_C",PCSetCoordinates_BDDC);CHKERRQ(ierr);
2733da1bb401SStefano Zampini   PetscFunctionReturn(0);
2734da1bb401SStefano Zampini }
273543371fb9SStefano Zampini 
273643371fb9SStefano Zampini /*@C
273743371fb9SStefano Zampini  PCBDDCInitializePackage - This function initializes everything in the PCBDDC package. It is called
273843371fb9SStefano Zampini     from PetscDLLibraryRegister() when using dynamic libraries, and on the first call to PCCreate_BDDC()
273943371fb9SStefano Zampini     when using static libraries.
274043371fb9SStefano Zampini 
274143371fb9SStefano Zampini  Level: developer
274243371fb9SStefano Zampini 
274343371fb9SStefano Zampini  .keywords: PC, PCBDDC, initialize, package
274443371fb9SStefano Zampini  .seealso: PetscInitialize()
274543371fb9SStefano Zampini @*/
274643371fb9SStefano Zampini PetscErrorCode PCBDDCInitializePackage(void)
274743371fb9SStefano Zampini {
274843371fb9SStefano Zampini   PetscErrorCode ierr;
274943371fb9SStefano Zampini   int            i;
275043371fb9SStefano Zampini 
275143371fb9SStefano Zampini   PetscFunctionBegin;
275243371fb9SStefano Zampini   if (PCBDDCPackageInitialized) PetscFunctionReturn(0);
275343371fb9SStefano Zampini   PCBDDCPackageInitialized = PETSC_TRUE;
275443371fb9SStefano Zampini   ierr = PetscRegisterFinalize(PCBDDCFinalizePackage);CHKERRQ(ierr);
275543371fb9SStefano Zampini 
275643371fb9SStefano Zampini   /* general events */
275743371fb9SStefano Zampini   ierr = PetscLogEventRegister("PCBDDCTopo",PC_CLASSID,&PC_BDDC_Topology[0]);CHKERRQ(ierr);
275843371fb9SStefano Zampini   ierr = PetscLogEventRegister("PCBDDCLKSP",PC_CLASSID,&PC_BDDC_LocalSolvers[0]);CHKERRQ(ierr);
275943371fb9SStefano Zampini   ierr = PetscLogEventRegister("PCBDDCLWor",PC_CLASSID,&PC_BDDC_LocalWork[0]);CHKERRQ(ierr);
276043371fb9SStefano Zampini   ierr = PetscLogEventRegister("PCBDDCCorr",PC_CLASSID,&PC_BDDC_CorrectionSetUp[0]);CHKERRQ(ierr);
276143371fb9SStefano Zampini   ierr = PetscLogEventRegister("PCBDDCCSet",PC_CLASSID,&PC_BDDC_CoarseSetUp[0]);CHKERRQ(ierr);
276243371fb9SStefano Zampini   ierr = PetscLogEventRegister("PCBDDCCKSP",PC_CLASSID,&PC_BDDC_CoarseSolver[0]);CHKERRQ(ierr);
276343371fb9SStefano Zampini   ierr = PetscLogEventRegister("PCBDDCAdap",PC_CLASSID,&PC_BDDC_AdaptiveSetUp[0]);CHKERRQ(ierr);
276443371fb9SStefano Zampini   ierr = PetscLogEventRegister("PCBDDCScal",PC_CLASSID,&PC_BDDC_Scaling[0]);CHKERRQ(ierr);
276543371fb9SStefano Zampini   ierr = PetscLogEventRegister("PCBDDCSchr",PC_CLASSID,&PC_BDDC_Schurs[0]);CHKERRQ(ierr);
276643371fb9SStefano Zampini   for (i=1;i<PETSC_PCBDDC_MAXLEVELS;i++) {
276743371fb9SStefano Zampini     char ename[32];
276843371fb9SStefano Zampini 
276943371fb9SStefano Zampini     ierr = PetscSNPrintf(ename,sizeof(ename),"PCBDDCTopo l%02d",i);CHKERRQ(ierr);
277043371fb9SStefano Zampini     ierr = PetscLogEventRegister(ename,PC_CLASSID,&PC_BDDC_Topology[i]);CHKERRQ(ierr);
277143371fb9SStefano Zampini     ierr = PetscSNPrintf(ename,sizeof(ename),"PCBDDCLKSP l%02d",i);CHKERRQ(ierr);
277243371fb9SStefano Zampini     ierr = PetscLogEventRegister(ename,PC_CLASSID,&PC_BDDC_LocalSolvers[i]);CHKERRQ(ierr);
277343371fb9SStefano Zampini     ierr = PetscSNPrintf(ename,sizeof(ename),"PCBDDCLWor l%02d",i);CHKERRQ(ierr);
277443371fb9SStefano Zampini     ierr = PetscLogEventRegister(ename,PC_CLASSID,&PC_BDDC_LocalWork[i]);CHKERRQ(ierr);
277543371fb9SStefano Zampini     ierr = PetscSNPrintf(ename,sizeof(ename),"PCBDDCCorr l%02d",i);CHKERRQ(ierr);
277643371fb9SStefano Zampini     ierr = PetscLogEventRegister(ename,PC_CLASSID,&PC_BDDC_CorrectionSetUp[i]);CHKERRQ(ierr);
277743371fb9SStefano Zampini     ierr = PetscSNPrintf(ename,sizeof(ename),"PCBDDCCSet l%02d",i);CHKERRQ(ierr);
277843371fb9SStefano Zampini     ierr = PetscLogEventRegister(ename,PC_CLASSID,&PC_BDDC_CoarseSetUp[i]);CHKERRQ(ierr);
277943371fb9SStefano Zampini     ierr = PetscSNPrintf(ename,sizeof(ename),"PCBDDCCKSP l%02d",i);CHKERRQ(ierr);
278043371fb9SStefano Zampini     ierr = PetscLogEventRegister(ename,PC_CLASSID,&PC_BDDC_CoarseSolver[i]);CHKERRQ(ierr);
278143371fb9SStefano Zampini     ierr = PetscSNPrintf(ename,sizeof(ename),"PCBDDCAdap l%02d",i);CHKERRQ(ierr);
278243371fb9SStefano Zampini     ierr = PetscLogEventRegister(ename,PC_CLASSID,&PC_BDDC_AdaptiveSetUp[i]);CHKERRQ(ierr);
278343371fb9SStefano Zampini     ierr = PetscSNPrintf(ename,sizeof(ename),"PCBDDCScal l%02d",i);CHKERRQ(ierr);
278443371fb9SStefano Zampini     ierr = PetscLogEventRegister(ename,PC_CLASSID,&PC_BDDC_Scaling[i]);CHKERRQ(ierr);
278543371fb9SStefano Zampini     ierr = PetscSNPrintf(ename,sizeof(ename),"PCBDDCSchr l%02d",i);CHKERRQ(ierr);
278643371fb9SStefano Zampini     ierr = PetscLogEventRegister(ename,PC_CLASSID,&PC_BDDC_Schurs[i]);CHKERRQ(ierr);
278743371fb9SStefano Zampini   }
278843371fb9SStefano Zampini   PetscFunctionReturn(0);
278943371fb9SStefano Zampini }
279043371fb9SStefano Zampini 
279143371fb9SStefano Zampini /*@C
279243371fb9SStefano Zampini  PCBDDCFinalizePackage - This function frees everything from the PCBDDC package. It is
279343371fb9SStefano Zampini     called from PetscFinalize() automatically.
279443371fb9SStefano Zampini 
279543371fb9SStefano Zampini  Level: developer
279643371fb9SStefano Zampini 
279743371fb9SStefano Zampini  .keywords: Petsc, destroy, package
279843371fb9SStefano Zampini  .seealso: PetscFinalize()
279943371fb9SStefano Zampini @*/
280043371fb9SStefano Zampini PetscErrorCode PCBDDCFinalizePackage(void)
280143371fb9SStefano Zampini {
280243371fb9SStefano Zampini   PetscFunctionBegin;
280343371fb9SStefano Zampini   PCBDDCPackageInitialized = PETSC_FALSE;
280443371fb9SStefano Zampini   PetscFunctionReturn(0);
280543371fb9SStefano Zampini }
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