xref: /petsc/src/ksp/pc/impls/tfs/xyt.c (revision bebe2cf65d55febe21a5af8db2bd2e168caaa2e7)
1 
2 /*************************************xyt.c************************************
3 Module Name: xyt
4 Module Info:
5 
6 author:  Henry M. Tufo III
7 e-mail:  hmt@asci.uchicago.edu
8 contact:
9 +--------------------------------+--------------------------------+
10 |MCS Division - Building 221     |Department of Computer Science  |
11 |Argonne National Laboratory     |Ryerson 152                     |
12 |9700 S. Cass Avenue             |The University of Chicago       |
13 |Argonne, IL  60439              |Chicago, IL  60637              |
14 |(630) 252-5354/5986 ph/fx       |(773) 702-6019/8487 ph/fx       |
15 +--------------------------------+--------------------------------+
16 
17 Last Modification: 3.20.01
18 **************************************xyt.c***********************************/
19 #include <../src/ksp/pc/impls/tfs/tfs.h>
20 
21 #define LEFT  -1
22 #define RIGHT  1
23 #define BOTH   0
24 
25 typedef struct xyt_solver_info {
26   PetscInt    n, m, n_global, m_global;
27   PetscInt    nnz, max_nnz, msg_buf_sz;
28   PetscInt    *nsep, *lnsep, *fo, nfo, *stages;
29   PetscInt    *xcol_sz, *xcol_indices;
30   PetscScalar **xcol_vals, *x, *solve_uu, *solve_w;
31   PetscInt    *ycol_sz, *ycol_indices;
32   PetscScalar **ycol_vals, *y;
33   PetscInt    nsolves;
34   PetscScalar tot_solve_time;
35 } xyt_info;
36 
37 
38 typedef struct matvec_info {
39   PetscInt     n, m, n_global, m_global;
40   PetscInt     *local2global;
41   PCTFS_gs_ADT PCTFS_gs_handle;
42   PetscErrorCode (*matvec)(struct matvec_info*,PetscScalar*,PetscScalar*);
43   void *grid_data;
44 } mv_info;
45 
46 struct xyt_CDT {
47   PetscInt id;
48   PetscInt ns;
49   PetscInt level;
50   xyt_info *info;
51   mv_info  *mvi;
52 };
53 
54 static PetscInt n_xyt        =0;
55 static PetscInt n_xyt_handles=0;
56 
57 /* prototypes */
58 static PetscErrorCode do_xyt_solve(xyt_ADT xyt_handle, PetscScalar *rhs);
59 static PetscErrorCode check_handle(xyt_ADT xyt_handle);
60 static PetscErrorCode det_separators(xyt_ADT xyt_handle);
61 static PetscErrorCode do_matvec(mv_info *A, PetscScalar *v, PetscScalar *u);
62 static PetscInt xyt_generate(xyt_ADT xyt_handle);
63 static PetscInt do_xyt_factor(xyt_ADT xyt_handle);
64 static mv_info *set_mvi(PetscInt *local2global, PetscInt n, PetscInt m, PetscErrorCode (*matvec)(mv_info*,PetscScalar*,PetscScalar*), void *grid_data);
65 
66 /**************************************xyt.c***********************************/
67 xyt_ADT XYT_new(void)
68 {
69   xyt_ADT xyt_handle;
70 
71   /* rolling count on n_xyt ... pot. problem here */
72   n_xyt_handles++;
73   xyt_handle       = (xyt_ADT)malloc(sizeof(struct xyt_CDT));
74   xyt_handle->id   = ++n_xyt;
75   xyt_handle->info = NULL;
76   xyt_handle->mvi  = NULL;
77 
78   return(xyt_handle);
79 }
80 
81 /**************************************xyt.c***********************************/
82 PetscInt XYT_factor(xyt_ADT xyt_handle,     /* prev. allocated xyt  handle */
83                     PetscInt *local2global, /* global column mapping       */
84                     PetscInt n,             /* local num rows              */
85                     PetscInt m,             /* local num cols              */
86                     PetscErrorCode (*matvec)(void*,PetscScalar*,PetscScalar*), /* b_loc=A_local.x_loc         */
87                     void *grid_data)        /* grid data for matvec        */
88 {
89 
90   PCTFS_comm_init();
91   check_handle(xyt_handle);
92 
93   /* only 2^k for now and all nodes participating */
94   if ((1<<(xyt_handle->level=PCTFS_i_log2_num_nodes))!=PCTFS_num_nodes) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_PLIB,"only 2^k for now and MPI_COMM_WORLD!!! %D != %D\n",1<<PCTFS_i_log2_num_nodes,PCTFS_num_nodes);
95 
96   /* space for X info */
97   xyt_handle->info = (xyt_info*)malloc(sizeof(xyt_info));
98 
99   /* set up matvec handles */
100   xyt_handle->mvi = set_mvi(local2global, n, m, (PetscErrorCode (*)(mv_info*,PetscScalar*,PetscScalar*))matvec, grid_data);
101 
102   /* matrix is assumed to be of full rank */
103   /* LATER we can reset to indicate rank def. */
104   xyt_handle->ns=0;
105 
106   /* determine separators and generate firing order - NB xyt info set here */
107   det_separators(xyt_handle);
108 
109   return(do_xyt_factor(xyt_handle));
110 }
111 
112 /**************************************xyt.c***********************************/
113 PetscInt XYT_solve(xyt_ADT xyt_handle, PetscScalar *x, PetscScalar *b)
114 {
115   PCTFS_comm_init();
116   check_handle(xyt_handle);
117 
118   /* need to copy b into x? */
119   if (b) PCTFS_rvec_copy(x,b,xyt_handle->mvi->n);do_xyt_solve(xyt_handle,x);
120 
121   return(0);
122 }
123 
124 /**************************************xyt.c***********************************/
125 PetscInt XYT_free(xyt_ADT xyt_handle)
126 {
127   PCTFS_comm_init();
128   check_handle(xyt_handle);
129   n_xyt_handles--;
130 
131   free(xyt_handle->info->nsep);
132   free(xyt_handle->info->lnsep);
133   free(xyt_handle->info->fo);
134   free(xyt_handle->info->stages);
135   free(xyt_handle->info->solve_uu);
136   free(xyt_handle->info->solve_w);
137   free(xyt_handle->info->x);
138   free(xyt_handle->info->xcol_vals);
139   free(xyt_handle->info->xcol_sz);
140   free(xyt_handle->info->xcol_indices);
141   free(xyt_handle->info->y);
142   free(xyt_handle->info->ycol_vals);
143   free(xyt_handle->info->ycol_sz);
144   free(xyt_handle->info->ycol_indices);
145   free(xyt_handle->info);
146   free(xyt_handle->mvi->local2global);
147   PCTFS_gs_free(xyt_handle->mvi->PCTFS_gs_handle);
148   free(xyt_handle->mvi);
149   free(xyt_handle);
150 
151 
152   /* if the check fails we nuke */
153   /* if NULL pointer passed to free we nuke */
154   /* if the calls to free fail that's not my problem */
155   return(0);
156 }
157 
158 /**************************************xyt.c***********************************/
159 PetscInt XYT_stats(xyt_ADT xyt_handle)
160 {
161   PetscInt    op[]  = {NON_UNIFORM,GL_MIN,GL_MAX,GL_ADD,GL_MIN,GL_MAX,GL_ADD,GL_MIN,GL_MAX,GL_ADD};
162   PetscInt    fop[] = {NON_UNIFORM,GL_MIN,GL_MAX,GL_ADD};
163   PetscInt    vals[9],  work[9];
164   PetscScalar fvals[3], fwork[3];
165 
166   PCTFS_comm_init();
167   check_handle(xyt_handle);
168 
169   /* if factorization not done there are no stats */
170   if (!xyt_handle->info||!xyt_handle->mvi) {
171     if (!PCTFS_my_id) PetscPrintf(PETSC_COMM_WORLD,"XYT_stats() :: no stats available!\n");
172     return 1;
173   }
174 
175   vals[0]=vals[1]=vals[2]=xyt_handle->info->nnz;
176   vals[3]=vals[4]=vals[5]=xyt_handle->mvi->n;
177   vals[6]=vals[7]=vals[8]=xyt_handle->info->msg_buf_sz;
178   PCTFS_giop(vals,work,sizeof(op)/sizeof(op[0])-1,op);
179 
180   fvals[0]=fvals[1]=fvals[2]=xyt_handle->info->tot_solve_time/xyt_handle->info->nsolves++;
181   PCTFS_grop(fvals,fwork,sizeof(fop)/sizeof(fop[0])-1,fop);
182 
183   if (!PCTFS_my_id) {
184     PetscPrintf(PETSC_COMM_WORLD,"%D :: min   xyt_nnz=%D\n",PCTFS_my_id,vals[0]);
185     PetscPrintf(PETSC_COMM_WORLD,"%D :: max   xyt_nnz=%D\n",PCTFS_my_id,vals[1]);
186     PetscPrintf(PETSC_COMM_WORLD,"%D :: avg   xyt_nnz=%g\n",PCTFS_my_id,1.0*vals[2]/PCTFS_num_nodes);
187     PetscPrintf(PETSC_COMM_WORLD,"%D :: tot   xyt_nnz=%D\n",PCTFS_my_id,vals[2]);
188     PetscPrintf(PETSC_COMM_WORLD,"%D :: xyt   C(2d)  =%g\n",PCTFS_my_id,vals[2]/(PetscPowReal(1.0*vals[5],1.5)));
189     PetscPrintf(PETSC_COMM_WORLD,"%D :: xyt   C(3d)  =%g\n",PCTFS_my_id,vals[2]/(PetscPowReal(1.0*vals[5],1.6667)));
190     PetscPrintf(PETSC_COMM_WORLD,"%D :: min   xyt_n  =%D\n",PCTFS_my_id,vals[3]);
191     PetscPrintf(PETSC_COMM_WORLD,"%D :: max   xyt_n  =%D\n",PCTFS_my_id,vals[4]);
192     PetscPrintf(PETSC_COMM_WORLD,"%D :: avg   xyt_n  =%g\n",PCTFS_my_id,1.0*vals[5]/PCTFS_num_nodes);
193     PetscPrintf(PETSC_COMM_WORLD,"%D :: tot   xyt_n  =%D\n",PCTFS_my_id,vals[5]);
194     PetscPrintf(PETSC_COMM_WORLD,"%D :: min   xyt_buf=%D\n",PCTFS_my_id,vals[6]);
195     PetscPrintf(PETSC_COMM_WORLD,"%D :: max   xyt_buf=%D\n",PCTFS_my_id,vals[7]);
196     PetscPrintf(PETSC_COMM_WORLD,"%D :: avg   xyt_buf=%g\n",PCTFS_my_id,1.0*vals[8]/PCTFS_num_nodes);
197     PetscPrintf(PETSC_COMM_WORLD,"%D :: min   xyt_slv=%g\n",PCTFS_my_id,fvals[0]);
198     PetscPrintf(PETSC_COMM_WORLD,"%D :: max   xyt_slv=%g\n",PCTFS_my_id,fvals[1]);
199     PetscPrintf(PETSC_COMM_WORLD,"%D :: avg   xyt_slv=%g\n",PCTFS_my_id,fvals[2]/PCTFS_num_nodes);
200   }
201 
202   return(0);
203 }
204 
205 
206 /*************************************xyt.c************************************
207 
208 Description: get A_local, local portion of global coarse matrix which
209 is a row dist. nxm matrix w/ n<m.
210    o my_ml holds address of ML struct associated w/A_local and coarse grid
211    o local2global holds global number of column i (i=0,...,m-1)
212    o local2global holds global number of row    i (i=0,...,n-1)
213    o mylocmatvec performs A_local . vec_local (note that gs is performed using
214    PCTFS_gs_init/gop).
215 
216 mylocmatvec = my_ml->Amat[grid_tag].matvec->external;
217 mylocmatvec (void :: void *data, double *in, double *out)
218 **************************************xyt.c***********************************/
219 static PetscInt do_xyt_factor(xyt_ADT xyt_handle)
220 {
221   return xyt_generate(xyt_handle);
222 }
223 
224 /**************************************xyt.c***********************************/
225 static PetscInt xyt_generate(xyt_ADT xyt_handle)
226 {
227   PetscInt       i,j,k,idx;
228   PetscInt       dim, col;
229   PetscScalar    *u, *uu, *v, *z, *w, alpha, alpha_w;
230   PetscInt       *segs;
231   PetscInt       op[] = {GL_ADD,0};
232   PetscInt       off, len;
233   PetscScalar    *x_ptr, *y_ptr;
234   PetscInt       *iptr, flag;
235   PetscInt       start =0, end, work;
236   PetscInt       op2[] = {GL_MIN,0};
237   PCTFS_gs_ADT   PCTFS_gs_handle;
238   PetscInt       *nsep, *lnsep, *fo;
239   PetscInt       a_n            =xyt_handle->mvi->n;
240   PetscInt       a_m            =xyt_handle->mvi->m;
241   PetscInt       *a_local2global=xyt_handle->mvi->local2global;
242   PetscInt       level;
243   PetscInt       n, m;
244   PetscInt       *xcol_sz, *xcol_indices, *stages;
245   PetscScalar    **xcol_vals, *x;
246   PetscInt       *ycol_sz, *ycol_indices;
247   PetscScalar    **ycol_vals, *y;
248   PetscInt       n_global;
249   PetscInt       xt_nnz       =0, xt_max_nnz=0;
250   PetscInt       yt_nnz       =0, yt_max_nnz=0;
251   PetscInt       xt_zero_nnz  =0;
252   PetscInt       xt_zero_nnz_0=0;
253   PetscInt       yt_zero_nnz  =0;
254   PetscInt       yt_zero_nnz_0=0;
255   PetscBLASInt   i1           = 1,dlen;
256   PetscScalar    dm1          = -1.0;
257   PetscErrorCode ierr;
258 
259   n              =xyt_handle->mvi->n;
260   nsep           =xyt_handle->info->nsep;
261   lnsep          =xyt_handle->info->lnsep;
262   fo             =xyt_handle->info->fo;
263   end            =lnsep[0];
264   level          =xyt_handle->level;
265   PCTFS_gs_handle=xyt_handle->mvi->PCTFS_gs_handle;
266 
267   /* is there a null space? */
268   /* LATER add in ability to detect null space by checking alpha */
269   for (i=0, j=0; i<=level; i++) j+=nsep[i];
270 
271   m = j-xyt_handle->ns;
272   if (m!=j) {
273     ierr = PetscPrintf(PETSC_COMM_WORLD,"xyt_generate() :: null space exists %D %D %D\n",m,j,xyt_handle->ns);CHKERRQ(ierr);
274   }
275 
276   ierr = PetscInfo2(0,"xyt_generate() :: X(%D,%D)\n",n,m);CHKERRQ(ierr);
277 
278   /* get and initialize storage for x local         */
279   /* note that x local is nxm and stored by columns */
280   xcol_sz      = (PetscInt*) malloc(m*sizeof(PetscInt));
281   xcol_indices = (PetscInt*) malloc((2*m+1)*sizeof(PetscInt));
282   xcol_vals    = (PetscScalar**) malloc(m*sizeof(PetscScalar*));
283   for (i=j=0; i<m; i++, j+=2) {
284     xcol_indices[j]=xcol_indices[j+1]=xcol_sz[i]=-1;
285     xcol_vals[i]   = NULL;
286   }
287   xcol_indices[j]=-1;
288 
289   /* get and initialize storage for y local         */
290   /* note that y local is nxm and stored by columns */
291   ycol_sz      = (PetscInt*) malloc(m*sizeof(PetscInt));
292   ycol_indices = (PetscInt*) malloc((2*m+1)*sizeof(PetscInt));
293   ycol_vals    = (PetscScalar**) malloc(m*sizeof(PetscScalar*));
294   for (i=j=0; i<m; i++, j+=2) {
295     ycol_indices[j]=ycol_indices[j+1]=ycol_sz[i]=-1;
296     ycol_vals[i]   = NULL;
297   }
298   ycol_indices[j]=-1;
299 
300   /* size of separators for each sub-hc working from bottom of tree to top */
301   /* this looks like nsep[]=segments */
302   stages = (PetscInt*) malloc((level+1)*sizeof(PetscInt));
303   segs   = (PetscInt*) malloc((level+1)*sizeof(PetscInt));
304   PCTFS_ivec_zero(stages,level+1);
305   PCTFS_ivec_copy(segs,nsep,level+1);
306   for (i=0; i<level; i++) segs[i+1] += segs[i];
307   stages[0] = segs[0];
308 
309   /* temporary vectors  */
310   u  = (PetscScalar*) malloc(n*sizeof(PetscScalar));
311   z  = (PetscScalar*) malloc(n*sizeof(PetscScalar));
312   v  = (PetscScalar*) malloc(a_m*sizeof(PetscScalar));
313   uu = (PetscScalar*) malloc(m*sizeof(PetscScalar));
314   w  = (PetscScalar*) malloc(m*sizeof(PetscScalar));
315 
316   /* extra nnz due to replication of vertices across separators */
317   for (i=1, j=0; i<=level; i++) j+=nsep[i];
318 
319   /* storage for sparse x values */
320   n_global   = xyt_handle->info->n_global;
321   xt_max_nnz = yt_max_nnz = (PetscInt)(2.5*PetscPowReal(1.0*n_global,1.6667) + j*n/2)/PCTFS_num_nodes;
322   x          = (PetscScalar*) malloc(xt_max_nnz*sizeof(PetscScalar));
323   y          = (PetscScalar*) malloc(yt_max_nnz*sizeof(PetscScalar));
324 
325   /* LATER - can embed next sep to fire in gs */
326   /* time to make the donuts - generate X factor */
327   for (dim=i=j=0; i<m; i++) {
328     /* time to move to the next level? */
329     while (i==segs[dim]) {
330       if (dim==level) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"dim about to exceed level\n");
331       stages[dim++]=i;
332       end         +=lnsep[dim];
333     }
334     stages[dim]=i;
335 
336     /* which column are we firing? */
337     /* i.e. set v_l */
338     /* use new seps and do global min across hc to determine which one to fire */
339     (start<end) ? (col=fo[start]) : (col=INT_MAX);
340     PCTFS_giop_hc(&col,&work,1,op2,dim);
341 
342     /* shouldn't need this */
343     if (col==INT_MAX) {
344       ierr = PetscInfo(0,"hey ... col==INT_MAX??\n");CHKERRQ(ierr);
345       continue;
346     }
347 
348     /* do I own it? I should */
349     PCTFS_rvec_zero(v,a_m);
350     if (col==fo[start]) {
351       start++;
352       idx=PCTFS_ivec_linear_search(col, a_local2global, a_n);
353       if (idx!=-1) {
354         v[idx] = 1.0;
355         j++;
356       } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"NOT FOUND!\n");
357     } else {
358       idx=PCTFS_ivec_linear_search(col, a_local2global, a_m);
359       if (idx!=-1) v[idx] = 1.0;
360     }
361 
362     /* perform u = A.v_l */
363     PCTFS_rvec_zero(u,n);
364     do_matvec(xyt_handle->mvi,v,u);
365 
366     /* uu =  X^T.u_l (local portion) */
367     /* technically only need to zero out first i entries */
368     /* later turn this into an XYT_solve call ? */
369     PCTFS_rvec_zero(uu,m);
370     y_ptr=y;
371     iptr = ycol_indices;
372     for (k=0; k<i; k++) {
373       off   = *iptr++;
374       len   = *iptr++;
375       ierr  = PetscBLASIntCast(len,&dlen);CHKERRQ(ierr);
376       PetscStackCallBLAS("BLASdot",uu[k] = BLASdot_(&dlen,u+off,&i1,y_ptr,&i1));
377       y_ptr+=len;
378     }
379 
380     /* uu = X^T.u_l (comm portion) */
381     PCTFS_ssgl_radd  (uu, w, dim, stages);
382 
383     /* z = X.uu */
384     PCTFS_rvec_zero(z,n);
385     x_ptr=x;
386     iptr = xcol_indices;
387     for (k=0; k<i; k++) {
388       off  = *iptr++;
389       len  = *iptr++;
390       ierr = PetscBLASIntCast(len,&dlen);CHKERRQ(ierr);
391       PetscStackCallBLAS("BLASaxpy",BLASaxpy_(&dlen,&uu[k],x_ptr,&i1,z+off,&i1));
392       x_ptr+=len;
393     }
394 
395     /* compute v_l = v_l - z */
396     PCTFS_rvec_zero(v+a_n,a_m-a_n);
397     ierr = PetscBLASIntCast(n,&dlen);CHKERRQ(ierr);
398     PetscStackCallBLAS("BLASaxpy",BLASaxpy_(&dlen,&dm1,z,&i1,v,&i1));
399 
400     /* compute u_l = A.v_l */
401     if (a_n!=a_m) PCTFS_gs_gop_hc(PCTFS_gs_handle,v,"+\0",dim);
402     PCTFS_rvec_zero(u,n);
403     do_matvec(xyt_handle->mvi,v,u);
404 
405     /* compute sqrt(alpha) = sqrt(u_l^T.u_l) - local portion */
406     ierr  = PetscBLASIntCast(n,&dlen);CHKERRQ(ierr);
407     PetscStackCallBLAS("BLASdot",alpha = BLASdot_(&dlen,u,&i1,u,&i1));
408     /* compute sqrt(alpha) = sqrt(u_l^T.u_l) - comm portion */
409     PCTFS_grop_hc(&alpha, &alpha_w, 1, op, dim);
410 
411     alpha = (PetscScalar) PetscSqrtReal((PetscReal)alpha);
412 
413     /* check for small alpha                             */
414     /* LATER use this to detect and determine null space */
415     if (PetscAbsScalar(alpha)<1.0e-14) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_PLIB,"bad alpha! %g\n",alpha);
416 
417     /* compute v_l = v_l/sqrt(alpha) */
418     PCTFS_rvec_scale(v,1.0/alpha,n);
419     PCTFS_rvec_scale(u,1.0/alpha,n);
420 
421     /* add newly generated column, v_l, to X */
422     flag = 1;
423     off  =len=0;
424     for (k=0; k<n; k++) {
425       if (v[k]!=0.0) {
426         len=k;
427         if (flag) {off=k; flag=0;}
428       }
429     }
430 
431     len -= (off-1);
432 
433     if (len>0) {
434       if ((xt_nnz+len)>xt_max_nnz) {
435         ierr        = PetscInfo(0,"increasing space for X by 2x!\n");CHKERRQ(ierr);
436         xt_max_nnz *= 2;
437         x_ptr       = (PetscScalar*) malloc(xt_max_nnz*sizeof(PetscScalar));
438         PCTFS_rvec_copy(x_ptr,x,xt_nnz);
439         free(x);
440         x     = x_ptr;
441         x_ptr+=xt_nnz;
442       }
443       xt_nnz += len;
444       PCTFS_rvec_copy(x_ptr,v+off,len);
445 
446       /* keep track of number of zeros */
447       if (dim) {
448         for (k=0; k<len; k++) {
449           if (x_ptr[k]==0.0) xt_zero_nnz++;
450         }
451       } else {
452         for (k=0; k<len; k++) {
453           if (x_ptr[k]==0.0) xt_zero_nnz_0++;
454         }
455       }
456       xcol_indices[2*i] = off;
457       xcol_sz[i]        = xcol_indices[2*i+1] = len;
458       xcol_vals[i]      = x_ptr;
459     } else {
460       xcol_indices[2*i] = 0;
461       xcol_sz[i]        = xcol_indices[2*i+1] = 0;
462       xcol_vals[i]      = x_ptr;
463     }
464 
465 
466     /* add newly generated column, u_l, to Y */
467     flag = 1;
468     off  =len=0;
469     for (k=0; k<n; k++) {
470       if (u[k]!=0.0) {
471         len=k;
472         if (flag) { off=k; flag=0; }
473       }
474     }
475 
476     len -= (off-1);
477 
478     if (len>0) {
479       if ((yt_nnz+len)>yt_max_nnz) {
480         ierr        = PetscInfo(0,"increasing space for Y by 2x!\n");CHKERRQ(ierr);
481         yt_max_nnz *= 2;
482         y_ptr       = (PetscScalar*) malloc(yt_max_nnz*sizeof(PetscScalar));
483         PCTFS_rvec_copy(y_ptr,y,yt_nnz);
484         free(y);
485         y     = y_ptr;
486         y_ptr+=yt_nnz;
487       }
488       yt_nnz += len;
489       PCTFS_rvec_copy(y_ptr,u+off,len);
490 
491       /* keep track of number of zeros */
492       if (dim) {
493         for (k=0; k<len; k++) {
494           if (y_ptr[k]==0.0) yt_zero_nnz++;
495         }
496       } else {
497         for (k=0; k<len; k++) {
498           if (y_ptr[k]==0.0) yt_zero_nnz_0++;
499         }
500       }
501       ycol_indices[2*i] = off;
502       ycol_sz[i]        = ycol_indices[2*i+1] = len;
503       ycol_vals[i]      = y_ptr;
504     } else {
505       ycol_indices[2*i] = 0;
506       ycol_sz[i]        = ycol_indices[2*i+1] = 0;
507       ycol_vals[i]      = y_ptr;
508     }
509   }
510 
511   /* close off stages for execution phase */
512   while (dim!=level) {
513     stages[dim++]=i;
514     ierr         = PetscInfo2(0,"disconnected!!! dim(%D)!=level(%D)\n",dim,level);CHKERRQ(ierr);
515   }
516   stages[dim]=i;
517 
518   xyt_handle->info->n           =xyt_handle->mvi->n;
519   xyt_handle->info->m           =m;
520   xyt_handle->info->nnz         =xt_nnz + yt_nnz;
521   xyt_handle->info->max_nnz     =xt_max_nnz + yt_max_nnz;
522   xyt_handle->info->msg_buf_sz  =stages[level]-stages[0];
523   xyt_handle->info->solve_uu    = (PetscScalar*) malloc(m*sizeof(PetscScalar));
524   xyt_handle->info->solve_w     = (PetscScalar*) malloc(m*sizeof(PetscScalar));
525   xyt_handle->info->x           =x;
526   xyt_handle->info->xcol_vals   =xcol_vals;
527   xyt_handle->info->xcol_sz     =xcol_sz;
528   xyt_handle->info->xcol_indices=xcol_indices;
529   xyt_handle->info->stages      =stages;
530   xyt_handle->info->y           =y;
531   xyt_handle->info->ycol_vals   =ycol_vals;
532   xyt_handle->info->ycol_sz     =ycol_sz;
533   xyt_handle->info->ycol_indices=ycol_indices;
534 
535   free(segs);
536   free(u);
537   free(v);
538   free(uu);
539   free(z);
540   free(w);
541 
542   return(0);
543 }
544 
545 /**************************************xyt.c***********************************/
546 static PetscErrorCode do_xyt_solve(xyt_ADT xyt_handle,  PetscScalar *uc)
547 {
548   PetscInt       off, len, *iptr;
549   PetscInt       level        =xyt_handle->level;
550   PetscInt       n            =xyt_handle->info->n;
551   PetscInt       m            =xyt_handle->info->m;
552   PetscInt       *stages      =xyt_handle->info->stages;
553   PetscInt       *xcol_indices=xyt_handle->info->xcol_indices;
554   PetscInt       *ycol_indices=xyt_handle->info->ycol_indices;
555   PetscScalar    *x_ptr, *y_ptr, *uu_ptr;
556   PetscScalar    *solve_uu=xyt_handle->info->solve_uu;
557   PetscScalar    *solve_w =xyt_handle->info->solve_w;
558   PetscScalar    *x       =xyt_handle->info->x;
559   PetscScalar    *y       =xyt_handle->info->y;
560   PetscBLASInt   i1       = 1,dlen;
561   PetscErrorCode ierr;
562 
563   PetscFunctionBegin;
564   uu_ptr=solve_uu;
565   PCTFS_rvec_zero(uu_ptr,m);
566 
567   /* x  = X.Y^T.b */
568   /* uu = Y^T.b */
569   for (y_ptr=y,iptr=ycol_indices; *iptr!=-1; y_ptr+=len)
570   {
571     off       =*iptr++;
572     len       =*iptr++;
573     ierr      = PetscBLASIntCast(len,&dlen);CHKERRQ(ierr);
574     PetscStackCallBLAS("BLASdot",*uu_ptr++ = BLASdot_(&dlen,uc+off,&i1,y_ptr,&i1));
575   }
576 
577   /* comunication of beta */
578   uu_ptr=solve_uu;
579   if (level) PCTFS_ssgl_radd(uu_ptr, solve_w, level, stages);
580   PCTFS_rvec_zero(uc,n);
581 
582   /* x = X.uu */
583   for (x_ptr=x,iptr=xcol_indices; *iptr!=-1; x_ptr+=len) {
584     off  =*iptr++;
585     len  =*iptr++;
586     ierr = PetscBLASIntCast(len,&dlen);CHKERRQ(ierr);
587     PetscStackCallBLAS("BLASaxpy",BLASaxpy_(&dlen,uu_ptr++,x_ptr,&i1,uc+off,&i1));
588   }
589   PetscFunctionReturn(0);
590 }
591 
592 /**************************************xyt.c***********************************/
593 static PetscErrorCode check_handle(xyt_ADT xyt_handle)
594 {
595   PetscInt vals[2], work[2], op[] = {NON_UNIFORM,GL_MIN,GL_MAX};
596 
597   PetscFunctionBegin;
598   if (!xyt_handle) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_PLIB,"check_handle() :: bad handle :: NULL %D\n",xyt_handle);
599 
600   vals[0]=vals[1]=xyt_handle->id;
601   PCTFS_giop(vals,work,sizeof(op)/sizeof(op[0])-1,op);
602   if ((vals[0]!=vals[1])||(xyt_handle->id<=0)) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_PLIB,"check_handle() :: bad handle :: id mismatch min/max %D/%D %D\n", vals[0],vals[1], xyt_handle->id);
603   PetscFunctionReturn(0);
604 }
605 
606 /**************************************xyt.c***********************************/
607 static PetscErrorCode det_separators(xyt_ADT xyt_handle)
608 {
609   PetscInt       i, ct, id;
610   PetscInt       mask, edge, *iptr;
611   PetscInt       *dir, *used;
612   PetscInt       sum[4], w[4];
613   PetscScalar    rsum[4], rw[4];
614   PetscInt       op[] = {GL_ADD,0};
615   PetscScalar    *lhs, *rhs;
616   PetscInt       *nsep, *lnsep, *fo, nfo=0;
617   PCTFS_gs_ADT   PCTFS_gs_handle=xyt_handle->mvi->PCTFS_gs_handle;
618   PetscInt       *local2global  =xyt_handle->mvi->local2global;
619   PetscInt       n              =xyt_handle->mvi->n;
620   PetscInt       m              =xyt_handle->mvi->m;
621   PetscInt       level          =xyt_handle->level;
622   PetscInt       shared         =0;
623   PetscErrorCode ierr;
624 
625   PetscFunctionBegin;
626   dir  = (PetscInt*)malloc(sizeof(PetscInt)*(level+1));
627   nsep = (PetscInt*)malloc(sizeof(PetscInt)*(level+1));
628   lnsep= (PetscInt*)malloc(sizeof(PetscInt)*(level+1));
629   fo   = (PetscInt*)malloc(sizeof(PetscInt)*(n+1));
630   used = (PetscInt*)malloc(sizeof(PetscInt)*n);
631 
632   PCTFS_ivec_zero(dir,level+1);
633   PCTFS_ivec_zero(nsep,level+1);
634   PCTFS_ivec_zero(lnsep,level+1);
635   PCTFS_ivec_set (fo,-1,n+1);
636   PCTFS_ivec_zero(used,n);
637 
638   lhs = (PetscScalar*)malloc(sizeof(PetscScalar)*m);
639   rhs = (PetscScalar*)malloc(sizeof(PetscScalar)*m);
640 
641   /* determine the # of unique dof */
642   PCTFS_rvec_zero(lhs,m);
643   PCTFS_rvec_set(lhs,1.0,n);
644   PCTFS_gs_gop_hc(PCTFS_gs_handle,lhs,"+\0",level);
645   ierr = PetscInfo(0,"done first PCTFS_gs_gop_hc\n");CHKERRQ(ierr);
646   PCTFS_rvec_zero(rsum,2);
647   for (ct=i=0; i<n; i++)
648   {
649     if (lhs[i]!=0.0) { rsum[0]+=1.0/lhs[i]; rsum[1]+=lhs[i]; }
650 
651     if (lhs[i]!=1.0) shared=1;
652   }
653 
654   PCTFS_grop_hc(rsum,rw,2,op,level);
655   rsum[0]+=0.1;
656   rsum[1]+=0.1;
657 
658   xyt_handle->info->n_global=xyt_handle->info->m_global=(PetscInt) rsum[0];
659   xyt_handle->mvi->n_global =xyt_handle->mvi->m_global =(PetscInt) rsum[0];
660 
661   /* determine separator sets top down */
662   if (shared) {
663     /* solution is to do as in the symmetric shared case but then */
664     /* pick the sub-hc with the most free dofs and do a mat-vec   */
665     /* and pick up the responses on the other sub-hc from the     */
666     /* initial separator set obtained from the symm. shared case  */
667     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"shared dof separator determination not ready ... see hmt!!!\n");
668     /* [dead code deleted since it is unlikely to be completed] */
669   } else {
670     for (iptr=fo+n,id=PCTFS_my_id,mask=PCTFS_num_nodes>>1,edge=level;edge>0;edge--,mask>>=1) {
671       /* set rsh of hc, fire, and collect lhs responses */
672       (id<mask) ? PCTFS_rvec_zero(lhs,m) : PCTFS_rvec_set(lhs,1.0,m);
673       PCTFS_gs_gop_hc(PCTFS_gs_handle,lhs,"+\0",edge);
674 
675       /* set lsh of hc, fire, and collect rhs responses */
676       (id<mask) ? PCTFS_rvec_set(rhs,1.0,m) : PCTFS_rvec_zero(rhs,m);
677       PCTFS_gs_gop_hc(PCTFS_gs_handle,rhs,"+\0",edge);
678 
679       /* count number of dofs I own that have signal and not in sep set */
680       for (PCTFS_ivec_zero(sum,4),ct=i=0;i<n;i++) {
681         if (!used[i]) {
682           /* number of unmarked dofs on node */
683           ct++;
684           /* number of dofs to be marked on lhs hc */
685           if ((id< mask)&&(lhs[i]!=0.0)) sum[0]++;
686           /* number of dofs to be marked on rhs hc */
687           if ((id>=mask)&&(rhs[i]!=0.0)) sum[1]++;
688         }
689       }
690 
691       /* for the non-symmetric case we need separators of width 2 */
692       /* so take both sides */
693       (id<mask) ? (sum[2]=ct) : (sum[3]=ct);
694       PCTFS_giop_hc(sum,w,4,op,edge);
695 
696       ct=0;
697       if (id<mask) {
698         /* mark dofs I own that have signal and not in sep set */
699         for (i=0;i<n;i++) {
700           if ((!used[i])&&(lhs[i]!=0.0)) {
701             ct++; nfo++;
702             *--iptr = local2global[i];
703             used[i] =edge;
704           }
705         }
706         /* LSH hc summation of ct should be sum[0] */
707       } else {
708         /* mark dofs I own that have signal and not in sep set */
709         for (i=0; i<n; i++) {
710           if ((!used[i])&&(rhs[i]!=0.0)) {
711             ct++; nfo++;
712             *--iptr = local2global[i];
713             used[i] = edge;
714           }
715         }
716         /* RSH hc summation of ct should be sum[1] */
717       }
718 
719       if (ct>1) PCTFS_ivec_sort(iptr,ct);
720       lnsep[edge]=ct;
721       nsep[edge] =sum[0]+sum[1];
722       dir [edge] =BOTH;
723 
724       /* LATER or we can recur on these to order seps at this level */
725       /* do we need full set of separators for this?                */
726 
727       /* fold rhs hc into lower */
728       if (id>=mask) id-=mask;
729     }
730   }
731 
732   /* level 0 is on processor case - so mark the remainder */
733   for (ct=i=0;i<n;i++) {
734     if (!used[i]) {
735       ct++; nfo++;
736       *--iptr = local2global[i];
737       used[i] = edge;
738     }
739   }
740   if (ct>1) PCTFS_ivec_sort(iptr,ct);
741   lnsep[edge]=ct;
742   nsep [edge]=ct;
743   dir  [edge]=BOTH;
744 
745   xyt_handle->info->nsep  = nsep;
746   xyt_handle->info->lnsep = lnsep;
747   xyt_handle->info->fo    = fo;
748   xyt_handle->info->nfo   = nfo;
749 
750   free(dir);
751   free(lhs);
752   free(rhs);
753   free(used);
754   PetscFunctionReturn(0);
755 }
756 
757 /**************************************xyt.c***********************************/
758 static mv_info *set_mvi(PetscInt *local2global, PetscInt n, PetscInt m, PetscErrorCode (*matvec)(mv_info*,PetscScalar*,PetscScalar*), void *grid_data)
759 {
760   mv_info *mvi;
761 
762 
763   mvi              = (mv_info*)malloc(sizeof(mv_info));
764   mvi->n           = n;
765   mvi->m           = m;
766   mvi->n_global    = -1;
767   mvi->m_global    = -1;
768   mvi->local2global= (PetscInt*)malloc((m+1)*sizeof(PetscInt));
769 
770   PCTFS_ivec_copy(mvi->local2global,local2global,m);
771   mvi->local2global[m] = INT_MAX;
772   mvi->matvec          = matvec;
773   mvi->grid_data       = grid_data;
774 
775   /* set xyt communication handle to perform restricted matvec */
776   mvi->PCTFS_gs_handle = PCTFS_gs_init(local2global, m, PCTFS_num_nodes);
777 
778   return(mvi);
779 }
780 
781 /**************************************xyt.c***********************************/
782 static PetscErrorCode do_matvec(mv_info *A, PetscScalar *v, PetscScalar *u)
783 {
784   PetscFunctionBegin;
785   A->matvec((mv_info*)A->grid_data,v,u);
786   PetscFunctionReturn(0);
787 }
788 
789 
790 
791